Citrus Sinensis ID: 016991

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
Protein Sequence
MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIHL
Secondary Structure (PSIPRED)
ccccccccccEEEEEEEEccccEEEEEEEEcccccEEEEEEEEcHHHccccHHHHHHHHHHHHHHcccccEEEEEEEEEcccEEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEcccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccHHHHHHHHHHccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHcccEEEEEccEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cccccccHHHEEEEEEEEEccccEEEEEEEcccccEEEEEEEEHHHHHHcccHHHHHHHHHHHHHcccccEccEEEEEEcccEEEEEEccccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccEEccccccEEEcccccHHHccHHHHHcccccccHHHHHHHHHHHHHHHHcccccccHcHHHHHHHHHcccccccccccHHHHHHHHHHcccccccEEEHHHHHccccHcccccccccccccccccccccccccccccccccccccccccccccccHHHHEEccccccHHHHHHccccccccEEEEcccccHHHHHHHHHHHHHHcccEEEEcccEEEEEEEcc
Coil and Loop (DISEMBL)
MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHChskgvyhrdlkpenllldsygnlkvsdfglsalpqqgvellhttcgtpnyvapevlsnrgydgsaadvWSCGVILFVLMAgylpfgetdlptLYKKInaaefscpfwfstgatslihkildpnpktririegirkhpwfrknynpvkcseeeevnlddvhavfdDIEDQYVAEqsenkvggpllMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIHL
Flexible Loop (DISEMBL)
mkkqtrrvakyevgrtigegtfakvrfaqnretgesvaMKVLakstilkhrmvDQIKREIsimkivrhpniVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATslihkildpnpktririegirkhpwfrknynPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAEslslkvhtrnyKVCLVLIHL
Low Complexity Region (SEG)
MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIHL
Disordered region (IsUnstruct)
*********KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIH*
Disordered Region (DISOPRED)
*****RR**KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE**NLDDVHAV**********************MNAFEMITLSQGLNLAA*F*****************PA*VILSNIEAVAESLSLKVHTRNYKVCLVLI**
Disordered Region (DISEMBL)
**********YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIHL
Disordered Region (DISPRO)
****TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKC********************************GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIHL
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLIHL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	379	2.2.26 [Sep-21-2011]
Q9LDI3	446	CBL-interacting serine/th	yes	no	0.986	0.838	0.770	1e-176
Q69Q47	453	CBL-interacting protein k	yes	no	0.973	0.814	0.750	1e-169
Q5JLD8	446	CBL-interacting protein k	no	no	0.963	0.818	0.722	1e-159
Q9STV4	445	CBL-interacting serine/th	no	no	0.965	0.822	0.700	1e-156
Q6ZLP5	450	CBL-interacting protein k	no	no	0.960	0.808	0.630	1e-138
Q2V452	441	CBL-interacting serine/th	no	no	0.963	0.827	0.603	1e-135
Q93VD3	482	CBL-interacting serine/th	no	no	0.968	0.761	0.607	1e-135
Q2RAX3	454	CBL-interacting protein k	no	no	0.965	0.806	0.611	1e-134
Q2QY53	438	CBL-interacting protein k	no	no	0.968	0.837	0.609	1e-134
Q84VQ3	439	CBL-interacting serine/th	no	no	0.970	0.838	0.604	1e-133

>sp|Q9LDI3|CIPKO_ARATH CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1

 Score =  616 bits (1588), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/374 (77%), Positives = 330/374 (88%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M K+ RRV KYEVGRTIGEGTFAKV+FA+N +TG++VA+K++AKSTILK+RMVDQIKREI
Sbjct: 1   MTKKMRRVGKYEVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTILKNRMVDQIKREI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRL+EVLAS +K+YI+LEFVTGGELFD+IVH+GRL E++ R+YFQQL+D
Sbjct: 61  SIMKIVRHPNIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVD 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCH KGVYHRDLKPENLLLD+ GNLKVSDFGLSALPQ+GVELL TTCGTPNYVAPEV
Sbjct: 121 AVAHCHCKGVYHRDLKPENLLLDTNGNLKVSDFGLSALPQEGVELLRTTCGTPNYVAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           LS +GYDGSAAD+WSCGVILFV++AGYLPF ETDLP LY+KINAAEFSCP WFS     L
Sbjct: 181 LSGQGYDGSAADIWSCGVILFVILAGYLPFSETDLPGLYRKINAAEFSCPPWFSAEVKFL 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           IH+ILDPNPKTRI+I+GI+K PWFR NY P++  EEEEVNLDD+ AVFD IE  YVAE  
Sbjct: 241 IHRILDPNPKTRIQIQGIKKDPWFRLNYVPIRAREEEEVNLDDIRAVFDGIEGSYVAENV 300

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E    GPL+MNAFEMITLSQGLNL+ALFDRRQD+VKRQTRFVSR+    I++NIEAVA S
Sbjct: 301 ERNDEGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANS 360

Query: 361 LSLKVHTRNYKVCL 374
           +  K HTRN+K  L
Sbjct: 361 MGFKSHTRNFKTRL 374

Involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Activates the vacuolar H(+)/Ca(2+) antiporter CAX1 and operates in synergy with CBL4/SOS3 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q69Q47|CIPKO_ORYSJ CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1

 Score =  594 bits (1531), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 277/369 (75%), Positives = 323/369 (87%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           +RV +YEVGRTIG+GTFAKV+FA + +TG +VAMKVL K TIL HRM+ QIKREISIMKI
Sbjct: 13  KRVGRYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTILNHRMLHQIKREISIMKI 72

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           VRHPNIVRL+EVLA +TK+YIILE +TGGELFDKI  QG+L EN+ R+YFQQLIDA+ +C
Sbjct: 73  VRHPNIVRLNEVLAGKTKIYIILELITGGELFDKIARQGKLRENEARKYFQQLIDAINYC 132

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HSKGVYHRDLKPENLLLDS GNLKVSDFGLS L Q+GV LLHTTCGTPNYVAPEVLSN G
Sbjct: 133 HSKGVYHRDLKPENLLLDSRGNLKVSDFGLSTLAQKGVGLLHTTCGTPNYVAPEVLSNNG 192

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           YDGSAADVWSCGVIL+VLMAGYLPF E DLPTLY KI A +FSCP+WFS GATSLIH+IL
Sbjct: 193 YDGSAADVWSCGVILYVLMAGYLPFEEDDLPTLYDKITAGQFSCPYWFSPGATSLIHRIL 252

Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVG 305
           DPNPKTRI IE IR+  WF+K Y  +K  E+E V+LDDV AVFD+IED+YV+EQ  +  G
Sbjct: 253 DPNPKTRITIEQIREDTWFKKTYVAIKRGEDENVDLDDVQAVFDNIEDKYVSEQVTHNDG 312

Query: 306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKV 365
           GPL+MNAFEMITLSQGL+L+ALFDR+Q++VKRQTRFVSR+PA+ I++ IE VAE++ LKV
Sbjct: 313 GPLVMNAFEMITLSQGLDLSALFDRQQEFVKRQTRFVSRKPAKTIVATIEVVAETMGLKV 372

Query: 366 HTRNYKVCL 374
           H++NYK+ L
Sbjct: 373 HSQNYKLRL 381

Involved in the regulatory pathway for the control of intracellular Na(+) and K(+) homeostasis and salt tolerance. Operates in synergy with CBL4 to activate the plasma membrane Na(+)/H(+) antiporter SOS1. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5JLD8|CIPK8_ORYSJ CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1

 Score =  560 bits (1444), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 265/367 (72%), Positives = 305/367 (83%), Gaps = 2/367 (0%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           RRV KYEVGRTIGEGTFAKV+FAQN E+GESVAMKV+ +S+ILKH+M DQIKREISIMK+
Sbjct: 8   RRVGKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKL 67

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           VRHPN+VRLHEVLASR K++IILEF+TGGELFDKI+  GRL E D RRYFQQLID V  C
Sbjct: 68  VRHPNVVRLHEVLASRKKIFIILEFITGGELFDKIIRHGRLNEADARRYFQQLIDGVDFC 127

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HSKGVYHRDLKPENLLLDS GNLK+SDFGLSA P QG  LL TTCGTPNYVAPEVLS++G
Sbjct: 128 HSKGVYHRDLKPENLLLDSQGNLKISDFGLSAWPAQGGALLRTTCGTPNYVAPEVLSHKG 187

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           YDG+ AD WSCGVIL+VL+AGYLPF E DL TLY KI +AE+S P WF  GA SLIH+IL
Sbjct: 188 YDGALADTWSCGVILYVLLAGYLPFDEVDLTTLYGKIESAEYSFPAWFPNGAKSLIHRIL 247

Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVG 305
           DPNP  RIRIE IR   WF+KNY P +  E EEVNLDDV+A FDD E+   A+ + +   
Sbjct: 248 DPNPDKRIRIEEIRNDEWFKKNYEPTREIESEEVNLDDVNAAFDDPEED--ADHTLDDEA 305

Query: 306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKV 365
           GPL +NAF++I LSQGLNLAALFDRRQDY K Q RF+SR+PA+VI+S++E VA+S+  K 
Sbjct: 306 GPLTLNAFDLIILSQGLNLAALFDRRQDYDKLQNRFLSRKPAKVIMSSMEVVAQSMGYKT 365

Query: 366 HTRNYKV 372
           H RNYK+
Sbjct: 366 HIRNYKM 372

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9STV4|CIPK8_ARATH CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1

 Score =  551 bits (1420), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 257/367 (70%), Positives = 310/367 (84%), Gaps = 1/367 (0%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R+V KYE+GRTIGEGTFAKV+FAQN ETGESVAMK++ +STI+K +MVDQIKREISIMK+
Sbjct: 4   RKVGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKL 63

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           VRHP +VRL+EVLASRTK+YIILE++TGGELFDKIV  GRL E++ R+YF QLID V +C
Sbjct: 64  VRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYC 123

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HSKGVYHRDLKPENLLLDS GNLK+SDFGLSALP+QGV +L TTCGTPNYVAPEVLS++G
Sbjct: 124 HSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVTILKTTCGTPNYVAPEVLSHKG 183

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           Y+G+ AD+WSCGVIL+VLMAGYLPF E DLPTLY KI+ AEFSCP +F+ GA SLI++IL
Sbjct: 184 YNGAVADIWSCGVILYVLMAGYLPFDEMDLPTLYSKIDKAEFSCPSYFALGAKSLINRIL 243

Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVG 305
           DPNP+TRI I  IRK  WF K+Y PV+  + E VNLDDV+A FDD E+Q  A Q   +  
Sbjct: 244 DPNPETRITIAEIRKDEWFLKDYTPVQLIDYEHVNLDDVYAAFDDPEEQTYA-QDGTRDT 302

Query: 306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKV 365
           GPL +NAF++I LSQGLNLA LFDR +D +K QTRF+S +PA V+LS++E V++S+  K 
Sbjct: 303 GPLTLNAFDLIILSQGLNLATLFDRGKDSMKHQTRFISHKPANVVLSSMEVVSQSMGFKT 362

Query: 366 HTRNYKV 372
           H RNYK+
Sbjct: 363 HIRNYKM 369

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6ZLP5|CIPKN_ORYSJ CBL-interacting protein kinase 23 OS=Oryza sativa subsp. japonica GN=CIPK23 PE=2 SV=1

 Score =  493 bits (1268), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 235/373 (63%), Positives = 297/373 (79%), Gaps = 9/373 (2%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           RV +YE+GRT+GEGTFAKV+FA+N ++GE+VA+K+L K  +LKH+M+ QIKREIS MK++
Sbjct: 9   RVGRYELGRTLGEGTFAKVKFARNADSGENVAIKILDKDKVLKHKMIAQIKREISTMKLI 68

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           RHPN++R+HEV+AS+TK+YI++E VTGGELFDKI  +GRL E+D R+YFQQLI+AV +CH
Sbjct: 69  RHPNVIRMHEVMASKTKIYIVMELVTGGELFDKIASRGRLKEDDARKYFQQLINAVDYCH 128

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNR 184
           S+GVYHRDLKPENLLLD+ G LKVSDFGLSAL QQ  E  LLHTTCGTPNYVAPEV++N+
Sbjct: 129 SRGVYHRDLKPENLLLDASGTLKVSDFGLSALSQQVREDGLLHTTCGTPNYVAPEVINNK 188

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
           GYDG+ AD+WSCGVILFVLMAGYLPF +++L +LYKKI  A+FSCP WFST A  LI KI
Sbjct: 189 GYDGAKADLWSCGVILFVLMAGYLPFEDSNLMSLYKKIFKADFSCPSWFSTSAKKLIKKI 248

Query: 245 LDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIED--QYVAEQSEN 302
           LDPNP TRI I  +  + WF+K Y P +  E  +VNLDD++++F++  D  Q V E+ E 
Sbjct: 249 LDPNPSTRITIAELINNEWFKKGYQPPRF-ETADVNLDDINSIFNESGDQTQLVVERREE 307

Query: 303 KVGGPLLMNAFEMITLSQGLNLAALFDRR-QDYVKRQTRFVSRQPAQVILSNIEAVAESL 361
           +   P +MNAFE+I+ SQGLNL  LF+++ Q  VKR+TRF SR PA  ILS IEA A  +
Sbjct: 308 R---PSVMNAFELISTSQGLNLGTLFEKQSQGSVKRETRFASRLPANEILSKIEAAAGPM 364

Query: 362 SLKVHTRNYKVCL 374
              V  RNYK+ L
Sbjct: 365 GFNVQKRNYKLKL 377

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2V452|CIPK3_ARATH CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/371 (60%), Positives = 292/371 (78%), Gaps = 6/371 (1%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           RRV KYEVGRTIGEGTFAKV+FA+N ETGE VA+K+L K  +LKH+M +QI+REI+ MK+
Sbjct: 9   RRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKL 68

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           ++HPN+V+L+EV+AS+TK++IILE+VTGGELFDKIV+ GR+ E++ RRYFQQLI AV +C
Sbjct: 69  IKHPNVVQLYEVMASKTKIFIILEYVTGGELFDKIVNDGRMKEDEARRYFQQLIHAVDYC 128

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSN 183
           HS+GVYHRDLKPENLLLDSYGNLK+SDFGLSAL QQ  +  LLHT+CGTPNYVAPEVL++
Sbjct: 129 HSRGVYHRDLKPENLLLDSYGNLKISDFGLSALSQQVRDDGLLHTSCGTPNYVAPEVLND 188

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK 243
           RGYDG+ AD+WSCGV+L+VL+AGYLPF +++L  LYKKI++ EF+CP W S GA  LI +
Sbjct: 189 RGYDGATADMWSCGVVLYVLLAGYLPFDDSNLMNLYKKISSGEFNCPPWLSLGAMKLITR 248

Query: 244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENK 303
           ILDPNP TR+  + + +  WF+K+Y P    E ++ N+DD+ AVF D E+  V E+ E +
Sbjct: 249 ILDPNPMTRVTPQEVFEDEWFKKDYKPPVFEERDDSNMDDIDAVFKDSEEHLVTEKREEQ 308

Query: 304 VGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSL 363
              P  +NAFE+I++S+GLNL  LFD  Q++ KR+TR   R  A  I+  IE  A+ L  
Sbjct: 309 ---PAAINAFEIISMSRGLNLENLFDPEQEF-KRETRITLRGGANEIIEKIEEAAKPLGF 364

Query: 364 KVHTRNYKVCL 374
            V  +NYK+ L
Sbjct: 365 DVQKKNYKMRL 375

Involved in the resistance to some abiotic stresses (e.g. high salt, hyperosmotic stress) in young seedlings, by regulating the expression of several stress-inducible genes (cold-and salt-induced genes but not drought-responsive genes). Required for the ABA response during germination. CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q93VD3|CIPKN_ARATH CBL-interacting serine/threonine-protein kinase 23 OS=Arabidopsis thaliana GN=CIPK23 PE=1 SV=1

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 226/372 (60%), Positives = 289/372 (77%), Gaps = 5/372 (1%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           V KYE+GRT+GEGTFAKV+FA+N E G++VA+KV+ K  +LK++M+ QIKREIS MK+++
Sbjct: 28  VGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLIK 87

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++R+ EV+AS+TK+Y +LEFVTGGELFDKI   GRL E++ R+YFQQLI+AV +CHS
Sbjct: 88  HPNVIRMFEVMASKTKIYFVLEFVTGGELFDKISSNGRLKEDEARKYFQQLINAVDYCHS 147

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRG 185
           +GVYHRDLKPENLLLD+ G LKVSDFGLSALPQQ  E  LLHTTCGTPNYVAPEV++N+G
Sbjct: 148 RGVYHRDLKPENLLLDANGALKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKG 207

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           YDG+ AD+WSCGVILFVLMAGYLPF +++L +LYKKI  AEF+CP WFS  A  LI +IL
Sbjct: 208 YDGAKADLWSCGVILFVLMAGYLPFEDSNLTSLYKKIFKAEFTCPPWFSASAKKLIKRIL 267

Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIED--QYVAEQSENK 303
           DPNP TRI    + ++ WF+K Y   K  E  +V+LDDV A+FDD  +    V E+ E  
Sbjct: 268 DPNPATRITFAEVIENEWFKKGYKAPKF-ENADVSLDDVDAIFDDSGESKNLVVERREEG 326

Query: 304 VGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSL 363
           +  P+ MNAFE+I+ SQGLNL +LF+++   VKR+TRF S+  A  I++ IEA A  +  
Sbjct: 327 LKTPVTMNAFELISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMGF 386

Query: 364 KVHTRNYKVCLV 375
            V T NYK+ L 
Sbjct: 387 DVKTNNYKMKLT 398

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein leads to activation of the kinase in a calcium-dependent manner. Downstream of CBL1, CBL2, CBL3 and CBL9, regulates by phosphorylation the K(+) conductance and uptake of AKT1 in low K(+) condition, in response to calcium signaling and during the stomatal opening regulation by monitoring the turgor pressure in guard cells. In response to low nitrate concentration, phosphorylates NRT1.1, switching it from a low-affinity nitrate transporter to a high-affinity transporter. Confers tolerance to low potassium conditions. Involved in drought sensitivity and leaf transpiration.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2RAX3|CIPKX_ORYSJ CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1

 Score =  478 bits (1230), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/373 (61%), Positives = 291/373 (78%), Gaps = 7/373 (1%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  RRV KYE+GRTIGEGTFAKV+FA++ ETG+ VA+K+L K  +LKH+MV+QIKREIS 
Sbjct: 5   KVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREIST 64

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           MK+++HPN+VR++EV+ S+T +YI+LE+VTGGELFD IV+ GR+ E++ RRYFQQLI+AV
Sbjct: 65  MKLIKHPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAV 124

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEV 180
            +CHS+GVYHRDLKPENLLLDSYGNLKVSDFGLSAL QQ  +  LLHTTCGTPNYVAPEV
Sbjct: 125 DYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEV 184

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L ++GYDG+ AD+WSCGVILFVL+AGYLPF +++L TLYKKI+ AEF+ P W S  A  L
Sbjct: 185 LEDQGYDGAMADLWSCGVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFPPWTSFPAKRL 244

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           + +ILDPNP TRI I  I +  WF+K Y   +  E+ +  LDDV AVF+D E+ +V E+ 
Sbjct: 245 LTRILDPNPMTRITIPEILEDEWFKKGYKRPEFDEKYDTTLDDVDAVFNDSEEHHVTEKK 304

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E     P  +NAFE+I++S GLNL  LFD  Q++ KR+TRF S+ P + I+  IE  A+ 
Sbjct: 305 EE----PEALNAFELISMSAGLNLGNLFDSEQEF-KRETRFTSKCPPKEIVRKIEEAAKP 359

Query: 361 LSLKVHTRNYKVC 373
           L   V  +NYK+C
Sbjct: 360 LGFDVQKKNYKIC 372

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2QY53|CIPKW_ORYSJ CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2

 Score =  477 bits (1227), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 228/374 (60%), Positives = 293/374 (78%), Gaps = 7/374 (1%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  RRV KYE+GRTIGEGTFAKV+FA++ ETG+ VA+K+L K  +LKH+MV+QIKREIS 
Sbjct: 5   KVKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREIST 64

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           MK+++HPN+VR++EV+ S+TK+YI+LE+VTGGELFD IV+ GR+ E++ RRYFQQLI+AV
Sbjct: 65  MKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAV 124

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEV 180
            +CHS+GVYHRDLKPENLLLDSYGNLKVSDFGLSAL QQ  +  LLHTTCGTPNYVAPEV
Sbjct: 125 DYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEV 184

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L ++GYDG+ AD+WSCGVILFVL+AGYLPF +++L TLYKKI+ AEF+ P W S  A  L
Sbjct: 185 LEDQGYDGAMADLWSCGVILFVLLAGYLPFEDSNLMTLYKKISNAEFTFPPWTSFPAKRL 244

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           + +ILDPNP TR+ I  I +  WF+K Y   +  E+ +  LDDV+AVF+D E+ +V E+ 
Sbjct: 245 LTRILDPNPMTRVTIPEILEDEWFKKGYKRPEFDEKYDTTLDDVYAVFNDSEEHHVTEKK 304

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E     P  +NAFE+I++S GLNL  LFD  Q++ KR+TRF S+ P + I+  IE  A+ 
Sbjct: 305 EE----PEALNAFELISMSAGLNLGNLFDSEQEF-KRETRFTSKCPPKEIVRKIEEAAKP 359

Query: 361 LSLKVHTRNYKVCL 374
           L   V  +NYK+ L
Sbjct: 360 LGFDVQKKNYKLRL 373

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q84VQ3|CIPKQ_ARATH CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2

 Score =  473 bits (1217), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 226/374 (60%), Positives = 286/374 (76%), Gaps = 6/374 (1%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  RRV KYEVG+T+G+GTFAKVR A N ETGE VA+K+L K  +LKH+M +QI+REI  
Sbjct: 5   KVQRRVGKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICT 64

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           MK++ HPN+VRL+EVLAS+TK+YI+LEF TGGELFDKIVH GRL E + R+YFQQLI+AV
Sbjct: 65  MKLINHPNVVRLYEVLASKTKIYIVLEFGTGGELFDKIVHDGRLKEENARKYFQQLINAV 124

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV 180
            +CHS+GVYHRDLKPENLLLD+ GNLKVSDFGLSAL +Q  G  LLHT CGTPNY APEV
Sbjct: 125 DYCHSRGVYHRDLKPENLLLDAQGNLKVSDFGLSALSRQVRGDGLLHTACGTPNYAAPEV 184

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L+++GYDG+ AD+WSCGVILFVL+AGYLPF +++L TLYKKI A E+ CP W S GA +L
Sbjct: 185 LNDQGYDGATADLWSCGVILFVLLAGYLPFEDSNLMTLYKKIIAGEYHCPPWLSPGAKNL 244

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I +ILDPNP TRI I  +    WF+KNY P    E+EE NLDDV AVF D E+ +V E+ 
Sbjct: 245 IVRILDPNPMTRITIPEVLGDAWFKKNYKPAVFEEKEEANLDDVDAVFKDSEEHHVTEKK 304

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E +   P  MNAFE+I++S+ L+L  LF+  + + KR+TRF ++  A  ++  IE  ++ 
Sbjct: 305 EEQ---PTSMNAFELISMSRALDLGNLFEEEEGF-KRETRFAAKGAANDLVQKIEEASKP 360

Query: 361 LSLKVHTRNYKVCL 374
           L   +  +NYK+ L
Sbjct: 361 LGFDIQKKNYKMRL 374

CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	379
255567051	449	CBL-interacting serine/threonine-protein	0.986	0.832	0.866	0.0
224993594	444	CBL-interacting protein kinase 26 [Popul	0.986	0.842	0.855	0.0
147846506	446	hypothetical protein VITISV_043742 [Viti	0.986	0.838	0.839	0.0
224142617	444	predicted protein [Populus trichocarpa]	0.986	0.842	0.850	0.0
225445529	446	PREDICTED: CBL-interacting serine/threon	0.986	0.838	0.839	0.0
229893775	446	serine/threonine protein kinase [Malus x	0.986	0.838	0.839	0.0
350535735	446	calcineurin B-like interacting protein k	0.978	0.831	0.811	0.0
310896475	445	salt overly sensitive protein 2b [Gossyp	0.984	0.838	0.823	0.0
224087128	431	predicted protein [Populus trichocarpa]	0.973	0.856	0.831	0.0
356563005	446	PREDICTED: CBL-interacting protein kinas	0.986	0.838	0.804	0.0

>gi|255567051|ref|XP_002524508.1| CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis] gi|223536296|gb|EEF37948.1| CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/374 (86%), Positives = 349/374 (93%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MK  +R+V KYEVGRTIGEGTFAKV+FAQN ETGESVAMKV+AKSTILKHRMVDQIKREI
Sbjct: 4   MKSVSRKVGKYEVGRTIGEGTFAKVKFAQNLETGESVAMKVMAKSTILKHRMVDQIKREI 63

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRH NIVRLHEVLASRTK+YIILEFVTGGELFDKIVHQGRL EN+ RRYFQQLID
Sbjct: 64  SIMKIVRHNNIVRLHEVLASRTKIYIILEFVTGGELFDKIVHQGRLSENEARRYFQQLID 123

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCHSKGVYHRDLKPENLLLDS+GNLKVSDFGLSALPQQGV LLHTTCGTPNYVAPEV
Sbjct: 124 AVAHCHSKGVYHRDLKPENLLLDSFGNLKVSDFGLSALPQQGVGLLHTTCGTPNYVAPEV 183

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           + ++GYDG+AADVWSCGVIL+VLMAGYLPF E DLPTLY+KINAAE+S PFWFS GA SL
Sbjct: 184 IGHQGYDGAAADVWSCGVILYVLMAGYLPFDEVDLPTLYRKINAAEYSSPFWFSPGAKSL 243

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KILDPNPKTRI+IEGI+KH WFRKNY PVK SEEEEVNLDDVHAVF DIEDQYVAEQ+
Sbjct: 244 IDKILDPNPKTRIKIEGIKKHLWFRKNYMPVKQSEEEEVNLDDVHAVFGDIEDQYVAEQT 303

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           EN  GGPL+MNAFEMITLSQGLNL+ALFDR+QDY+KRQTRFVSR+PA+ I+S IEAVAES
Sbjct: 304 ENSEGGPLIMNAFEMITLSQGLNLSALFDRQQDYIKRQTRFVSRRPAKDIISTIEAVAES 363

Query: 361 LSLKVHTRNYKVCL 374
           +SLKVHTRNYK  L
Sbjct: 364 MSLKVHTRNYKTRL 377

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224993594|gb|ACN76476.1| CBL-interacting protein kinase 26 [Populus euphratica]

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/374 (85%), Positives = 348/374 (93%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK TR+V KYEVGRTIGEGTFAKV+FAQNRETGESVAMK+L+KS ILKHRMVDQIKREI
Sbjct: 2   MKKVTRKVGKYEVGRTIGEGTFAKVKFAQNRETGESVAMKILSKSAILKHRMVDQIKREI 61

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMK+VRHP IVRLHEVLASRTK+YIILEFVTGGELFDKIVHQGRL EN+ RRYFQQLID
Sbjct: 62  SIMKLVRHPYIVRLHEVLASRTKIYIILEFVTGGELFDKIVHQGRLGENESRRYFQQLID 121

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCH KGVYHRDLKPENLLLD++GNLKVSDFGLSALPQ+GV LLHTTCGTPNYVAPEV
Sbjct: 122 AVAHCHCKGVYHRDLKPENLLLDAFGNLKVSDFGLSALPQKGVGLLHTTCGTPNYVAPEV 181

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L N+GYDG+AADVWSCGVILFVLMAGYLPF E DLPTLY+KINAAE+SCPFWFS GA +L
Sbjct: 182 LGNQGYDGAAADVWSCGVILFVLMAGYLPFEEADLPTLYRKINAAEYSCPFWFSPGAKAL 241

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KIL+PNP+TRI IEGI+KHPWF+KNY PV   E+EEVNLDDVHAVFDDIEDQYVAEQ 
Sbjct: 242 IDKILNPNPRTRIGIEGIKKHPWFQKNYEPVGHREDEEVNLDDVHAVFDDIEDQYVAEQL 301

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           EN VGGPL+MNAFEMITLSQGLNL+ALFDRRQDY+KRQTRFVSR+PA+ I+S IEAVA S
Sbjct: 302 ENSVGGPLVMNAFEMITLSQGLNLSALFDRRQDYIKRQTRFVSRKPAEDIISTIEAVAGS 361

Query: 361 LSLKVHTRNYKVCL 374
           ++LKVHTRNYK  L
Sbjct: 362 MNLKVHTRNYKTRL 375

Source: Populus euphratica

Species: Populus euphratica

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147846506|emb|CAN83760.1| hypothetical protein VITISV_043742 [Vitis vinifera] gi|229609819|gb|ACQ83525.1| CBL-interacting protein kinase 09 [Vitis vinifera]

 Score =  669 bits (1727), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/374 (83%), Positives = 345/374 (92%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK TR+V KYEVGRTIGEGTFAKV+FA N ETGESVAMKV+AKSTILKHRMVDQIK+EI
Sbjct: 1   MKKVTRKVGKYEVGRTIGEGTFAKVKFAHNTETGESVAMKVMAKSTILKHRMVDQIKQEI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRLHEVLAS+T +YIILEFVTGGEL+DKIVHQGRL EN+ RRYFQQLID
Sbjct: 61  SIMKIVRHPNIVRLHEVLASQTTIYIILEFVTGGELYDKIVHQGRLSENESRRYFQQLID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AV+HCHSKGVYHRDLKPENLLLDS GNLKVSDFGLSALP+QGV LLHTTCGTPNYVAPEV
Sbjct: 121 AVSHCHSKGVYHRDLKPENLLLDSNGNLKVSDFGLSALPKQGVGLLHTTCGTPNYVAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           LSN+GYDG+AADVWSCGVIL+VLMAGYLPF E DLP+LYKKINAAEFSCPFWFS+G+ S 
Sbjct: 181 LSNQGYDGAAADVWSCGVILYVLMAGYLPFNEIDLPSLYKKINAAEFSCPFWFSSGSKSF 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           + +ILDPNPKTRIRIEGI+  PWFRKNY   KC E+EEVNLDD+HAVFDDIE+ YV+EQS
Sbjct: 241 LCRILDPNPKTRIRIEGIKNDPWFRKNYVSSKCREDEEVNLDDIHAVFDDIEENYVSEQS 300

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
            N   GPL+MNAFEMITLSQGLNL+ALFDRRQDYVKRQTRFVSR+PA+VI+S IEAVAES
Sbjct: 301 GNNDTGPLIMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFVSREPAKVIISTIEAVAES 360

Query: 361 LSLKVHTRNYKVCL 374
           ++ KVHTR+YK  L
Sbjct: 361 MNFKVHTRHYKTRL 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142617|ref|XP_002324651.1| predicted protein [Populus trichocarpa] gi|116265968|gb|ABJ91232.1| CBL-interacting protein kinase 26 [Populus trichocarpa] gi|222866085|gb|EEF03216.1| predicted protein [Populus trichocarpa]

 Score =  668 bits (1724), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/374 (85%), Positives = 346/374 (92%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK TR+V KYEVGRTIGEGTFAKV+FAQNRETGESVAMK+L+KS ILKHRMVDQIKREI
Sbjct: 2   MKKVTRKVGKYEVGRTIGEGTFAKVKFAQNRETGESVAMKILSKSAILKHRMVDQIKREI 61

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMK+VRHP IV LHEVLASRTK+YIILEFVTGGELFDKIVHQ RL EN+ RRYFQQLID
Sbjct: 62  SIMKLVRHPYIVMLHEVLASRTKIYIILEFVTGGELFDKIVHQRRLEENESRRYFQQLID 121

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCH KGVYHRDLKPENLLLD++GNLKVSDFGLSALPQ+GV LLHTTCGTPNYVAPEV
Sbjct: 122 AVAHCHCKGVYHRDLKPENLLLDAFGNLKVSDFGLSALPQKGVGLLHTTCGTPNYVAPEV 181

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L ++GYDG+AADVWSCGVILFVLMAGYLPF ETDLPTLY+KINAAE+SCPFWFS GA +L
Sbjct: 182 LGHQGYDGAAADVWSCGVILFVLMAGYLPFEETDLPTLYRKINAAEYSCPFWFSPGAKAL 241

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KIL+PNPKTRI IEGI+KHPWF+KNY PV   E+EEVNLDDVHAVFDDIEDQYVAEQ 
Sbjct: 242 IDKILNPNPKTRIGIEGIKKHPWFQKNYEPVGHREDEEVNLDDVHAVFDDIEDQYVAEQL 301

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           EN   GPL+MNAFEMITLSQGLNL+ALFDRRQDY+KRQTRFVSR+PA+ I+S IEAVAES
Sbjct: 302 ENSEDGPLVMNAFEMITLSQGLNLSALFDRRQDYIKRQTRFVSRKPAKDIISAIEAVAES 361

Query: 361 LSLKVHTRNYKVCL 374
           ++LKVHTRNYK  L
Sbjct: 362 MNLKVHTRNYKTRL 375

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445529|ref|XP_002285262.1| PREDICTED: CBL-interacting serine/threonine-protein kinase 24 [Vitis vinifera] gi|297738965|emb|CBI28210.3| unnamed protein product [Vitis vinifera]

 Score =  667 bits (1722), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/374 (83%), Positives = 345/374 (92%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK TR+V KYEVGRTIGEGTFAKV+FA N ETGESVAMKV+AKSTILKHRMVDQIK+EI
Sbjct: 1   MKKVTRKVGKYEVGRTIGEGTFAKVKFAHNTETGESVAMKVMAKSTILKHRMVDQIKQEI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRLHEVLAS+T +YIILEFVTGGEL+DKIVHQGRL EN+ RRYFQQLID
Sbjct: 61  SIMKIVRHPNIVRLHEVLASQTTIYIILEFVTGGELYDKIVHQGRLSENESRRYFQQLID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AV+HCHSKGVYHRDLKPENLLLDS GNLKVSDFGLSALP+QGV LLHTTCGTPNYVAPEV
Sbjct: 121 AVSHCHSKGVYHRDLKPENLLLDSNGNLKVSDFGLSALPKQGVGLLHTTCGTPNYVAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           LSN+GYDG+AADVWSCGVIL+VLMAGYLPF E DLP+LYKKINAAEFSCPFWFS+G+ SL
Sbjct: 181 LSNQGYDGAAADVWSCGVILYVLMAGYLPFNEIDLPSLYKKINAAEFSCPFWFSSGSKSL 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           + +ILD NPKTRIRIEGI+  PWFRKNY   KC E+EEVNLDD+HAVFDDIE+ YV+EQS
Sbjct: 241 LCRILDSNPKTRIRIEGIKNDPWFRKNYVSSKCREDEEVNLDDIHAVFDDIEENYVSEQS 300

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
            N   GPL+MNAFEMITLSQGLNL+ALFDRRQDYVKRQTRFVSR+PA+VI+S IEAVAES
Sbjct: 301 GNNDTGPLIMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFVSREPAKVIISTIEAVAES 360

Query: 361 LSLKVHTRNYKVCL 374
           ++ KVHTR+YK  L
Sbjct: 361 MNFKVHTRHYKTRL 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|229893775|gb|ACQ90245.1| serine/threonine protein kinase [Malus x domestica]

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/374 (83%), Positives = 343/374 (91%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK++R V KYEVGRTIGEGTFAKV+FA+N ETGESVAMKVLAKSTILKHRMVDQIKREI
Sbjct: 1   MKKKSRNVGKYEVGRTIGEGTFAKVKFARNCETGESVAMKVLAKSTILKHRMVDQIKREI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRL EVLA RTK++IILEFVTGGELFDKIVHQG+L EN+ R+YFQQLID
Sbjct: 61  SIMKIVRHPNIVRLLEVLAGRTKIFIILEFVTGGELFDKIVHQGKLPENESRKYFQQLID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCHSKGVYHRDLKPENLLLD+YGNLKVSDFGLSALP QG  LLHTTCGTPNY+APEV
Sbjct: 121 AVAHCHSKGVYHRDLKPENLLLDAYGNLKVSDFGLSALPLQGDGLLHTTCGTPNYIAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L ++GYDGSAAD+WSCGVILFVLMAGYLPF ET+L TLY+KIN A+FSCPFWFS  A  L
Sbjct: 181 LGDQGYDGSAADIWSCGVILFVLMAGYLPFDETNLSTLYRKINDADFSCPFWFSPEANKL 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           IHKILDPNPKTRIRI+GIRK PWF+KNY P+   E+EEV+LDDV AVF+DIEDQYVAE+S
Sbjct: 241 IHKILDPNPKTRIRIDGIRKDPWFKKNYAPLTYREDEEVSLDDVRAVFEDIEDQYVAERS 300

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E K GGPLLMNAFEMITLSQGLNL+ALFDRRQDYV RQTRFVSR+PA VI+SN+EAVAES
Sbjct: 301 EIKDGGPLLMNAFEMITLSQGLNLSALFDRRQDYVNRQTRFVSRKPAHVIISNVEAVAES 360

Query: 361 LSLKVHTRNYKVCL 374
           + LKVHTRNYK  L
Sbjct: 361 MGLKVHTRNYKTRL 374

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350535735|ref|NP_001234210.1| calcineurin B-like interacting protein kinase [Solanum lycopersicum] gi|66765941|emb|CAG30526.1| calcineurin B-like interacting protein kinase [Solanum lycopersicum] gi|149930452|gb|ABR37648.1| putative SOS2-like protein kinase [Solanum lycopersicum]

 Score =  649 bits (1673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/371 (81%), Positives = 339/371 (91%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK  R++ KYEVGRTIGEGTFAKV+FA+N ETGE+VA+KVLAKSTILKHRMV+QIKREI
Sbjct: 1   MKKVKRKLGKYEVGRTIGEGTFAKVKFARNTETGENVAIKVLAKSTILKHRMVEQIKREI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHP IVRLHEVLAS+TK+YI+ EFVTGGELFDKIVH GRL E++ RRYFQ+LID
Sbjct: 61  SIMKIVRHPCIVRLHEVLASQTKIYIVQEFVTGGELFDKIVHLGRLSEDEARRYFQELID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+AHCHSKGVYHRDLKPENLLLD  GNLK+SDFGLSALPQQGVELL+TTCGTPNYVAPEV
Sbjct: 121 AIAHCHSKGVYHRDLKPENLLLDFQGNLKISDFGLSALPQQGVELLYTTCGTPNYVAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L NRGYDG+AADVWSCG+IL+VLMAGYLPF ETDLPTLY KI AAEFSCPFWFS GATSL
Sbjct: 181 LGNRGYDGAAADVWSCGIILYVLMAGYLPFDETDLPTLYTKIKAAEFSCPFWFSPGATSL 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KI+DPNP+TRI+I+GI++ PWFRKNY  VK   +E VNLDD+HAVFDDIED +V+E+S
Sbjct: 241 IQKIIDPNPQTRIKIDGIKRDPWFRKNYRAVKAKADEVVNLDDIHAVFDDIEDAFVSEKS 300

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E+   GPL+MNAFEMITLSQGLNL+ALFDRRQDYVKRQTRF+SRQPA+V++  IEA AES
Sbjct: 301 EDSESGPLVMNAFEMITLSQGLNLSALFDRRQDYVKRQTRFISRQPAKVVIETIEAAAES 360

Query: 361 LSLKVHTRNYK 371
           L LKVHTR+YK
Sbjct: 361 LGLKVHTRDYK 371

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|310896475|gb|ADP37983.1| salt overly sensitive protein 2b [Gossypium hirsutum]

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/374 (82%), Positives = 342/374 (91%), Gaps = 1/374 (0%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M+K+T  V KYEVGRTIG+GTFAKV+FA+N  +GESVA+KVL K+TILKHRMVDQIKREI
Sbjct: 1   MRKKTATVGKYEVGRTIGQGTFAKVKFARNSVSGESVALKVLPKATILKHRMVDQIKREI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRLHEVLASRTK+YIILEF++GGELFDKIVH GRL EN+CRRYFQQLID
Sbjct: 61  SIMKIVRHPNIVRLHEVLASRTKIYIILEFISGGELFDKIVHCGRLPENECRRYFQQLID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCHSKGVYHRDLKPENLLLDSYG+LKVSDFGLSAL QQGV LLHTTCGTPNYVAPEV
Sbjct: 121 AVAHCHSKGVYHRDLKPENLLLDSYGDLKVSDFGLSALLQQGVGLLHTTCGTPNYVAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L N+GYDG+AAD+WSCGVILF +MAGYLPF E D+PTLYKKI+A +FS PFWFS  A SL
Sbjct: 181 LGNQGYDGAAADIWSCGVILFFIMAGYLPFYEIDIPTLYKKISAGQFSSPFWFSPEANSL 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KILDPNPKTRI+IEGI+KHPWF+KNY PVK S EEEVNLDDV AVFDDIEDQYV+EQS
Sbjct: 241 IKKILDPNPKTRIQIEGIKKHPWFKKNYLPVKPS-EEEVNLDDVRAVFDDIEDQYVSEQS 299

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
             K GGPL+MNAFEMITLSQGLNL++LFDR+QDYVKRQTRFVSR+P + I+S++EAVAES
Sbjct: 300 VAKEGGPLMMNAFEMITLSQGLNLSSLFDRQQDYVKRQTRFVSRKPPRDIISSVEAVAES 359

Query: 361 LSLKVHTRNYKVCL 374
           + LKVHTRNYK  L
Sbjct: 360 MGLKVHTRNYKTRL 373

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087128|ref|XP_002308077.1| predicted protein [Populus trichocarpa] gi|116265970|gb|ABJ91233.1| CBL-interacting protein kinase 27 [Populus trichocarpa] gi|222854053|gb|EEE91600.1| predicted protein [Populus trichocarpa]

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/374 (83%), Positives = 336/374 (89%), Gaps = 5/374 (1%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK TR V KYEVGRTIGEG FAKV+FAQNRETGESVAMK+LAKSTILKH+MVDQIKREI
Sbjct: 2   MKKVTRMVGKYEVGRTIGEGNFAKVKFAQNRETGESVAMKILAKSTILKHKMVDQIKREI 61

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRLHEVL+SRTK+YIILEFVTGGELFDKIVHQGRL EN+ RRYFQQLID
Sbjct: 62  SIMKIVRHPNIVRLHEVLSSRTKIYIILEFVTGGELFDKIVHQGRLSENESRRYFQQLID 121

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AVAHCH KGVYHRDLKPENLLLD++GNLKVSDFGLSAL Q+GV LLHTTCGTPNYVAPEV
Sbjct: 122 AVAHCHRKGVYHRDLKPENLLLDAFGNLKVSDFGLSALRQKGVGLLHTTCGTPNYVAPEV 181

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L ++GYDG+AADVWSCGVILFVLMAGYLPF E DLPTL +K     +SCPFWFS  A +L
Sbjct: 182 LGHQGYDGAAADVWSCGVILFVLMAGYLPFEEIDLPTLCRK-----YSCPFWFSPVAKAL 236

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KILDPNPKTRI IEGI+KHPWFRK+Y PV  SEEEEVNLDDVHAVFDDIED YVAEQ 
Sbjct: 237 IDKILDPNPKTRIGIEGIKKHPWFRKSYEPVGHSEEEEVNLDDVHAVFDDIEDHYVAEQL 296

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           EN  GGPL+MNAFEMI LSQGLNL+ALFDRRQDYVK+QTRFVS +PA+VI+S  EAVAES
Sbjct: 297 ENSEGGPLVMNAFEMIALSQGLNLSALFDRRQDYVKKQTRFVSHKPAKVIISAFEAVAES 356

Query: 361 LSLKVHTRNYKVCL 374
           ++LK HT NYK  L
Sbjct: 357 MNLKFHTHNYKTRL 370

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563005|ref|XP_003549757.1| PREDICTED: CBL-interacting protein kinase 24-like isoform 1 [Glycine max]

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 301/374 (80%), Positives = 337/374 (90%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MKK  R++ KYEVGRTIGEGTFAKV+FA+N ETGESVA+KV+AK+TIL+HRMV+QIKREI
Sbjct: 1   MKKVRRKIGKYEVGRTIGEGTFAKVKFARNSETGESVAIKVMAKTTILQHRMVEQIKREI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           SIMKIVRHPNIVRLHEVLAS+TK+YIILEFV GGEL+DKIV  G+L EN+ R YFQQLID
Sbjct: 61  SIMKIVRHPNIVRLHEVLASQTKIYIILEFVMGGELYDKIVQLGKLSENESRHYFQQLID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AV HCH KGVYHRDLKPENLLLD+YGNLKVSDFGLSAL +QG +LLHTTCGTPNYVAPEV
Sbjct: 121 AVDHCHRKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGADLLHTTCGTPNYVAPEV 180

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           LSNRGYDG+AADVWSCGVIL+VLMAGYLPF E DLPTLY++INAAEF CPFWFS    S 
Sbjct: 181 LSNRGYDGAAADVWSCGVILYVLMAGYLPFEEADLPTLYRRINAAEFVCPFWFSADTKSF 240

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I KILDPNPKTR++IE IRK PWF+KNY PVK  E+E+VNLDDV AVFDDIEDQYV+E+S
Sbjct: 241 IQKILDPNPKTRVKIEEIRKDPWFKKNYFPVKLGEDEQVNLDDVRAVFDDIEDQYVSERS 300

Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
           E   GGPL+MNAFEMI LSQGLNL+ LFDR QDYVKRQTRFVSR+PA+VI+S+IEAVAES
Sbjct: 301 EITEGGPLIMNAFEMIALSQGLNLSPLFDRHQDYVKRQTRFVSRKPAKVIISSIEAVAES 360

Query: 361 LSLKVHTRNYKVCL 374
           + LKVH+RNYKV L
Sbjct: 361 MGLKVHSRNYKVRL 374

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	379
TAIR|locus:2155233	446	SOS2 "SALT OVERLY SENSITIVE 2"	0.986	0.838	0.770	1.1e-156
TAIR|locus:2135962	445	CIPK8 "CBL-interacting protein	0.965	0.822	0.697	1.7e-139
TAIR|locus:2059279	451	CIPK3 "CBL-interacting protein	0.963	0.809	0.603	2.8e-121
TAIR|locus:2009812	482	CIPK23 "CBL-interacting protei	0.968	0.761	0.610	2.5e-120
TAIR|locus:1005716172	439	CIPK26 "calcineurin B-like pro	0.970	0.838	0.604	5.2e-120
TAIR|locus:1005716169	831	AT5G21222 [Arabidopsis thalian	0.786	0.358	0.606	2.2e-96
TAIR|locus:2152380	439	CIPK20 "CBL-interacting protei	0.889	0.767	0.508	1.8e-94
TAIR|locus:2126749	441	SIP3 "SOS3-interacting protein	0.889	0.764	0.532	3e-94
TAIR|locus:2181047	421	CIPK15 "CBL-interacting protei	0.944	0.850	0.517	3.8e-94
TAIR|locus:2007685	432	CIPK17 "CBL-interacting protei	0.941	0.826	0.491	1.6e-93

TAIR|locus:2155233 SOS2 "SALT OVERLY SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1527 (542.6 bits), Expect = 1.1e-156, P = 1.1e-156
 Identities = 288/374 (77%), Positives = 330/374 (88%)

Query:     1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
             M K+ RRV KYEVGRTIGEGTFAKV+FA+N +TG++VA+K++AKSTILK+RMVDQIKREI
Sbjct:     1 MTKKMRRVGKYEVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTILKNRMVDQIKREI 60

Query:    61 SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
             SIMKIVRHPNIVRL+EVLAS +K+YI+LEFVTGGELFD+IVH+GRL E++ R+YFQQL+D
Sbjct:    61 SIMKIVRHPNIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVD 120

Query:   121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
             AVAHCH KGVYHRDLKPENLLLD+ GNLKVSDFGLSALPQ+GVELL TTCGTPNYVAPEV
Sbjct:   121 AVAHCHCKGVYHRDLKPENLLLDTNGNLKVSDFGLSALPQEGVELLRTTCGTPNYVAPEV 180

Query:   181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
             LS +GYDGSAAD+WSCGVILFV++AGYLPF ETDLP LY+KINAAEFSCP WFS     L
Sbjct:   181 LSGQGYDGSAADIWSCGVILFVILAGYLPFSETDLPGLYRKINAAEFSCPPWFSAEVKFL 240

Query:   241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
             IH+ILDPNPKTRI+I+GI+K PWFR NY P++  EEEEVNLDD+ AVFD IE  YVAE  
Sbjct:   241 IHRILDPNPKTRIQIQGIKKDPWFRLNYVPIRAREEEEVNLDDIRAVFDGIEGSYVAENV 300

Query:   301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
             E    GPL+MNAFEMITLSQGLNL+ALFDRRQD+VKRQTRFVSR+    I++NIEAVA S
Sbjct:   301 ERNDEGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANS 360

Query:   361 LSLKVHTRNYKVCL 374
             +  K HTRN+K  L
Sbjct:   361 MGFKSHTRNFKTRL 374

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0004672 "protein kinase activity" evidence=IDA

GO:0042802 "identical protein binding" evidence=IPI

GO:0009705 "plant-type vacuole membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IMP

TAIR|locus:2135962 CIPK8 "CBL-interacting protein kinase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1365 (485.6 bits), Expect = 1.7e-139, P = 1.7e-139
 Identities = 256/367 (69%), Positives = 309/367 (84%)

Query:     6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
             R+V KYE+GRTIGEGTFAKV+FAQN ETGESVAMK++ +STI+K +MVDQIKREISIMK+
Sbjct:     4 RKVGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKL 63

Query:    66 VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
             VRHP +VRL+EVLASRTK+YIILE++TGGELFDKIV  GRL E++ R+YF QLID V +C
Sbjct:    64 VRHPCVVRLYEVLASRTKIYIILEYITGGELFDKIVRNGRLSESEARKYFHQLIDGVDYC 123

Query:   126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
             HSKGVYHRDLKPENLLLDS GNLK+SDFGLSALP+QGV +L TTCGTPNYVAPEVLS++G
Sbjct:   124 HSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEQGVTILKTTCGTPNYVAPEVLSHKG 183

Query:   186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
             Y+G+ AD+WSCGVIL+VLMAGYLPF E DLPTLY KI+ AEFSCP +F+ GA SLI++IL
Sbjct:   184 YNGAVADIWSCGVILYVLMAGYLPFDEMDLPTLYSKIDKAEFSCPSYFALGAKSLINRIL 243

Query:   246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVG 305
             DPNP+TRI I  IRK  WF K+Y PV+  + E VNLDDV+A FDD E+Q  A+      G
Sbjct:   244 DPNPETRITIAEIRKDEWFLKDYTPVQLIDYEHVNLDDVYAAFDDPEEQTYAQDGTRDTG 303

Query:   306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKV 365
              PL +NAF++I LSQGLNLA LFDR +D +K QTRF+S +PA V+LS++E V++S+  K 
Sbjct:   304 -PLTLNAFDLIILSQGLNLATLFDRGKDSMKHQTRFISHKPANVVLSSMEVVSQSMGFKT 362

Query:   366 HTRNYKV 372
             H RNYK+
Sbjct:   363 HIRNYKM 369

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;TAS

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009749 "response to glucose stimulus" evidence=TAS

GO:0010167 "response to nitrate" evidence=IEP;IMP

GO:0048364 "root development" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2059279 CIPK3 "CBL-interacting protein kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
 Identities = 224/371 (60%), Positives = 292/371 (78%)

Query:     6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
             RRV KYEVGRTIGEGTFAKV+FA+N ETGE VA+K+L K  +LKH+M +QI+REI+ MK+
Sbjct:    19 RRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKL 78

Query:    66 VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
             ++HPN+V+L+EV+AS+TK++IILE+VTGGELFDKIV+ GR+ E++ RRYFQQLI AV +C
Sbjct:    79 IKHPNVVQLYEVMASKTKIFIILEYVTGGELFDKIVNDGRMKEDEARRYFQQLIHAVDYC 138

Query:   126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSN 183
             HS+GVYHRDLKPENLLLDSYGNLK+SDFGLSAL QQ  +  LLHT+CGTPNYVAPEVL++
Sbjct:   139 HSRGVYHRDLKPENLLLDSYGNLKISDFGLSALSQQVRDDGLLHTSCGTPNYVAPEVLND 198

Query:   184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK 243
             RGYDG+ AD+WSCGV+L+VL+AGYLPF +++L  LYKKI++ EF+CP W S GA  LI +
Sbjct:   199 RGYDGATADMWSCGVVLYVLLAGYLPFDDSNLMNLYKKISSGEFNCPPWLSLGAMKLITR 258

Query:   244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENK 303
             ILDPNP TR+  + + +  WF+K+Y P    E ++ N+DD+ AVF D E+  V E+ E +
Sbjct:   259 ILDPNPMTRVTPQEVFEDEWFKKDYKPPVFEERDDSNMDDIDAVFKDSEEHLVTEKREEQ 318

Query:   304 VGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSL 363
                P  +NAFE+I++S+GLNL  LFD  Q++ KR+TR   R  A  I+  IE  A+ L  
Sbjct:   319 ---PAAINAFEIISMSRGLNLENLFDPEQEF-KRETRITLRGGANEIIEKIEEAAKPLGF 374

Query:   364 KVHTRNYKVCL 374
              V  +NYK+ L
Sbjct:   375 DVQKKNYKMRL 385

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009735 "response to cytokinin stimulus" evidence=IEP

TAIR|locus:2009812 CIPK23 "CBL-interacting protein kinase 23" [Arabidopsis thaliana (taxid:3702)]

 Score = 1184 (421.8 bits), Expect = 2.5e-120, P = 2.5e-120
 Identities = 227/372 (61%), Positives = 290/372 (77%)

Query:     7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
             RV KYE+GRT+GEGTFAKV+FA+N E G++VA+KV+ K  +LK++M+ QIKREIS MK++
Sbjct:    27 RVGKYELGRTLGEGTFAKVKFARNVENGDNVAIKVIDKEKVLKNKMIAQIKREISTMKLI 86

Query:    67 RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             +HPN++R+ EV+AS+TK+Y +LEFVTGGELFDKI   GRL E++ R+YFQQLI+AV +CH
Sbjct:    87 KHPNVIRMFEVMASKTKIYFVLEFVTGGELFDKISSNGRLKEDEARKYFQQLINAVDYCH 146

Query:   127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNR 184
             S+GVYHRDLKPENLLLD+ G LKVSDFGLSALPQQ  E  LLHTTCGTPNYVAPEV++N+
Sbjct:   147 SRGVYHRDLKPENLLLDANGALKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNK 206

Query:   185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
             GYDG+ AD+WSCGVILFVLMAGYLPF +++L +LYKKI  AEF+CP WFS  A  LI +I
Sbjct:   207 GYDGAKADLWSCGVILFVLMAGYLPFEDSNLTSLYKKIFKAEFTCPPWFSASAKKLIKRI 266

Query:   245 LDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQ--YVAEQSEN 302
             LDPNP TRI    + ++ WF+K Y   K  E  +V+LDDV A+FDD  +    V E+ E 
Sbjct:   267 LDPNPATRITFAEVIENEWFKKGYKAPKF-ENADVSLDDVDAIFDDSGESKNLVVERREE 325

Query:   303 KVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLS 362
              +  P+ MNAFE+I+ SQGLNL +LF+++   VKR+TRF S+  A  I++ IEA A  + 
Sbjct:   326 GLKTPVTMNAFELISTSQGLNLGSLFEKQMGLVKRKTRFTSKSSANEIVTKIEAAAAPMG 385

Query:   363 LKVHTRNYKVCL 374
               V T NYK+ L
Sbjct:   386 FDVKTNNYKMKL 397

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IPI

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0010107 "potassium ion import" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0007584 "response to nutrient" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010118 "stomatal movement" evidence=RCA;IMP

GO:0009536 "plastid" evidence=IDA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

TAIR|locus:1005716172 CIPK26 "calcineurin B-like protein (CBL)-interacting protein kinase 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 1181 (420.8 bits), Expect = 5.2e-120, P = 5.2e-120
 Identities = 226/374 (60%), Positives = 286/374 (76%)

Query:     3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
             K  RRV KYEVG+T+G+GTFAKVR A N ETGE VA+K+L K  +LKH+M +QI+REI  
Sbjct:     5 KVQRRVGKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICT 64

Query:    63 MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
             MK++ HPN+VRL+EVLAS+TK+YI+LEF TGGELFDKIVH GRL E + R+YFQQLI+AV
Sbjct:    65 MKLINHPNVVRLYEVLASKTKIYIVLEFGTGGELFDKIVHDGRLKEENARKYFQQLINAV 124

Query:   123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV 180
              +CHS+GVYHRDLKPENLLLD+ GNLKVSDFGLSAL +Q  G  LLHT CGTPNY APEV
Sbjct:   125 DYCHSRGVYHRDLKPENLLLDAQGNLKVSDFGLSALSRQVRGDGLLHTACGTPNYAAPEV 184

Query:   181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
             L+++GYDG+ AD+WSCGVILFVL+AGYLPF +++L TLYKKI A E+ CP W S GA +L
Sbjct:   185 LNDQGYDGATADLWSCGVILFVLLAGYLPFEDSNLMTLYKKIIAGEYHCPPWLSPGAKNL 244

Query:   241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
             I +ILDPNP TRI I  +    WF+KNY P    E+EE NLDDV AVF D E+ +V E+ 
Sbjct:   245 IVRILDPNPMTRITIPEVLGDAWFKKNYKPAVFEEKEEANLDDVDAVFKDSEEHHVTEKK 304

Query:   301 ENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
             E +   P  MNAFE+I++S+ L+L  LF+  + + KR+TRF ++  A  ++  IE  ++ 
Sbjct:   305 EEQ---PTSMNAFELISMSRALDLGNLFEEEEGF-KRETRFAAKGAANDLVQKIEEASKP 360

Query:   361 LSLKVHTRNYKVCL 374
             L   +  +NYK+ L
Sbjct:   361 LGFDIQKKNYKMRL 374

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007165 "signal transduction" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:1005716169 AT5G21222 [Arabidopsis thaliana (taxid:3702)]

 Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
 Identities = 182/300 (60%), Positives = 234/300 (78%)

Query:     3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
             K  R V KYEVGR IGE  F K+R A + ETG+ VA+ +L K  +LKH+M +QIKREISI
Sbjct:     5 KVRRWVGKYEVGRLIGECNFGKLRSAVDTETGDPVALMILDKDKVLKHKMAEQIKREISI 64

Query:    63 MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
             MK++ HPN+V+L+EVLAS+ K+YI+LEF++GG+LFDKI + GR+ E++ +RYFQQLI+AV
Sbjct:    65 MKLINHPNVVQLYEVLASKAKIYIVLEFISGGKLFDKIKNDGRMNEDEAQRYFQQLINAV 124

Query:   123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV 180
              +CHS+GVYHRDLKPENLLLD+  NLKV++FGL AL QQ  G  L HT CG P+Y APEV
Sbjct:   125 DYCHSRGVYHRDLKPENLLLDAQENLKVAEFGLIALSQQAGGDGLRHTACGNPDYAAPEV 184

Query:   181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
             L+++GYDG+ AD+WSCGVILFVL+AGYLPF ++ L TLYKKI++A+FSCP W S+G  +L
Sbjct:   185 LNDQGYDGAKADLWSCGVILFVLLAGYLPFEDSSLTTLYKKISSADFSCPPWLSSGVKNL 244

Query:   241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
             I +ILDPNP TRI I  I +  WF+K+Y P    E++E NL DV AVF D E+  V  +S
Sbjct:   245 IVRILDPNPMTRITIPEILEDVWFKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRS 304

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2152380 CIPK20 "CBL-interacting protein kinase 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 940 (336.0 bits), Expect = 1.8e-94, P = 1.8e-94
 Identities = 180/354 (50%), Positives = 257/354 (72%)

Query:    10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
             KYE+GR +G+GTFAKV  A+N +TGESVA+KV+ K  + K  ++DQIKREIS+M++VRHP
Sbjct:    11 KYELGRLLGQGTFAKVYHARNIKTGESVAIKVIDKQKVAKVGLIDQIKREISVMRLVRHP 70

Query:    70 NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
             ++V LHEV+AS+TK+Y  +E+V GGELFDK V +G+L EN  R+YFQQLI A+ +CHS+G
Sbjct:    71 HVVFLHEVMASKTKIYFAMEYVKGGELFDK-VSKGKLKENIARKYFQQLIGAIDYCHSRG 129

Query:   130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYD 187
             VYHRDLKPENLLLD  G+LK+SDFGLSAL +   +  LLHTTCGTP YVAPEV+  +GYD
Sbjct:   130 VYHRDLKPENLLLDENGDLKISDFGLSALRESKQQDGLLHTTCGTPAYVAPEVIGKKGYD 189

Query:   188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
             G+ ADVWSCGV+L+VL+AG+LPF E +L  +Y+KI   EF CP WF      L+ +ILDP
Sbjct:   190 GAKADVWSCGVVLYVLLAGFLPFHEQNLVEMYRKITKGEFKCPNWFPPEVKKLLSRILDP 249

Query:   248 NPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGP 307
             NP +RI+IE I ++ WF+K +  ++  +  E +   + ++  D+   +  +        P
Sbjct:   250 NPNSRIKIEKIMENSWFQKGFKKIETPKSPESH--QIDSLISDVHAAFSVK--------P 299

Query:   308 LLMNAFEMIT-LSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAES 360
             +  NAF++I+ LSQG +L+ LF++ +   + +++F +++ A+ I+S  E +A S
Sbjct:   300 MSYNAFDLISSLSQGFDLSGLFEKEE---RSESKFTTKKDAKEIVSKFEEIATS 350

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

TAIR|locus:2126749 SIP3 "SOS3-interacting protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
 Identities = 188/353 (53%), Positives = 250/353 (70%)

Query:    10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
             +YE+GR +G GTFAKV  A+N +TG+SVAMKV+ K  ++K  MVDQIKREIS+M++V+HP
Sbjct:    23 RYELGRLLGHGTFAKVYHARNIQTGKSVAMKVVGKEKVVKVGMVDQIKREISVMRMVKHP 82

Query:    70 NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
             NIV LHEV+AS++K+Y  +E V GGELF K+  +GRL E+  R YFQQLI AV  CHS+G
Sbjct:    83 NIVELHEVMASKSKIYFAMELVRGGELFAKVA-KGRLREDVARVYFQQLISAVDFCHSRG 141

Query:   130 VYHRDLKPENLLLDSYGNLKVSDFGLSA----LPQQGVELLHTTCGTPNYVAPEVLSNRG 185
             VYHRDLKPENLLLD  GNLKV+DFGLSA    L Q G  LLHTTCGTP YVAPEV+  +G
Sbjct:   142 VYHRDLKPENLLLDEEGNLKVTDFGLSAFTEHLKQDG--LLHTTCGTPAYVAPEVILKKG 199

Query:   186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
             YDG+ AD+WSCGVILFVL+AGYLPF + +L  +Y+KI   +F CP W S+ A  L+ K+L
Sbjct:   200 YDGAKADLWSCGVILFVLLAGYLPFQDDNLVNMYRKIYRGDFKCPGWLSSDARRLVTKLL 259

Query:   246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVG 305
             DPNP TRI IE +   PWF+K       S  E V    +    +D++  ++  +S+ +  
Sbjct:   260 DPNPNTRITIEKVMDSPWFKKQATR---SRNEPVAAT-ITTTEEDVD--FLVHKSKEETE 313

Query:   306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVA 358
                 +NAF +I LS+G +L+ LF+ ++   KR+ RF + +PA  ++S++E  A
Sbjct:   314 ---TLNAFHIIALSEGFDLSPLFEEKKKEEKREMRFATSRPASSVISSLEEAA 363

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0007275 "multicellular organismal development" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0010540 "basipetal auxin transport" evidence=IMP

GO:0042538 "hyperosmotic salinity response" evidence=IDA

GO:0010118 "stomatal movement" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

TAIR|locus:2181047 CIPK15 "CBL-interacting protein kinase 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 193/373 (51%), Positives = 258/373 (69%)

Query:     2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
             KK +  + +YEVG+ +G+GTFAKV  A++ +TG+SVA+KV+ K  ILK  M +QIKREIS
Sbjct:     3 KKGSVLMLRYEVGKFLGQGTFAKVYHARHLKTGDSVAIKVIDKERILKVGMTEQIKREIS 62

Query:    62 IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
              M+++RHPNIV LHEV+A+++K+Y ++E V GGELF+K V  G+L E+  R+YFQQL+ A
Sbjct:    63 AMRLLRHPNIVELHEVMATKSKIYFVMEHVKGGELFNK-VSTGKLREDVARKYFQQLVRA 121

Query:   122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPE 179
             V  CHS+GV HRDLKPENLLLD +GNLK+SDFGLSAL     +  LLHTTCGTP YVAPE
Sbjct:   122 VDFCHSRGVCHRDLKPENLLLDEHGNLKISDFGLSALSDSRRQDGLLHTTCGTPAYVAPE 181

Query:   180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS 239
             V+S  GYDG  ADVWSCGVILFVL+AGYLPF +++L  LYKKI  AE   P W + GA  
Sbjct:   182 VISRNGYDGFKADVWSCGVILFVLLAGYLPFRDSNLMELYKKIGKAEVKFPNWLAPGAKR 241

Query:   240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYNP-VKCSEEEEVNLDDVHAVFDDIEDQYVAE 298
             L+ +ILDPNP TR+  E I K  WFRK     VK S EEE  +D       + E    AE
Sbjct:   242 LLKRILDPNPNTRVSTEKIMKSSWFRKGLQEEVKESVEEETEVDA------EAEGNASAE 295

Query:   299 QSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVA 358
             + + +    + +NAFE+I+LS G +L+ LF++ ++  K + RF S + A  I   +  + 
Sbjct:   296 KEKKRC---INLNAFEIISLSTGFDLSGLFEKGEE--KEEMRFTSNREASEITEKLVEIG 350

Query:   359 ESLSLKVHTRNYK 371
             + L +KV  + ++
Sbjct:   351 KDLKMKVRKKEHE 363

GO:0004672 "protein kinase activity" evidence=IEA;ISS;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

TAIR|locus:2007685 CIPK17 "CBL-interacting protein kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
 Identities = 182/370 (49%), Positives = 262/370 (70%)

Query:     7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
             RV KYE+GRT+GEG  AKV+FA +  TGES A+K++ KS I +  +  QIKREI  +K++
Sbjct:     7 RVGKYELGRTLGEGNSAKVKFAIDTLTGESFAIKIIEKSCITRLNVSFQIKREIRTLKVL 66

Query:    67 RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             +HPNIVRLHEVLAS+TK+Y++LE VTGG+LFD+IV +G+L E   R+ FQQLID V++CH
Sbjct:    67 KHPNIVRLHEVLASKTKIYMVLECVTGGDLFDRIVSKGKLSETQGRKMFQQLIDGVSYCH 126

Query:   127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNR 184
             +KGV+HRDLK EN+LLD+ G++K++DFGLSAL Q   E  LLHTTCG+PNYVAPEVL+N 
Sbjct:   127 NKGVFHRDLKLENVLLDAKGHIKITDFGLSALSQHYREDGLLHTTCGSPNYVAPEVLANE 186

Query:   185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
             GYDG+A+D+WSCGVIL+V++ G LPF + +L  + +KI   +   P W S GA ++I ++
Sbjct:   187 GYDGAASDIWSCGVILYVILTGCLPFDDANLAVICRKIFKGDPPIPRWISLGAKTMIKRM 246

Query:   245 LDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDI--EDQYVAEQSEN 302
             LDPNP TR+ I GI+ H WF+ +Y P    ++     DDV+ + +D+    +Y  E+S +
Sbjct:   247 LDPNPVTRVTIAGIKAHDWFKHDYTPSNYDDD-----DDVYLIQEDVFMMKEYEEEKSPD 301

Query:   303 KVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLS 362
                 P ++NAF++I +S  L+L+  F+  +   +RQ RF S   A+ +L NIE +   + 
Sbjct:   302 S---PTIINAFQLIGMSSFLDLSGFFETEK-LSERQIRFTSNSLAKDLLENIETIFTEMG 357

Query:   363 LKVHTRNYKV 372
               +  ++ K+
Sbjct:   358 FCLQKKHAKL 367

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9STV4	CIPK8_ARATH	2, ., 7, ., 1, 1, ., 1	0.7002	0.9656	0.8224	no	no
Q5JLD8	CIPK8_ORYSJ	2, ., 7, ., 1, 1, ., 1	0.7220	0.9630	0.8183	no	no
Q69Q47	CIPKO_ORYSJ	2, ., 7, ., 1, 1, ., 1	0.7506	0.9736	0.8145	yes	no
Q9LDI3	CIPKO_ARATH	2, ., 7, ., 1, 1, ., 1	0.7700	0.9868	0.8385	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.991
3rd Layer	2.7.11	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: CIPK26 SubName- Full=CBL-interacting protein kinase 26; (445 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	379
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-106
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-91
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-79
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-76
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-70
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-67
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-66
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	7e-63
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	8e-63
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-62
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-61
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-55
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-55
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	4e-54
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-53
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-53
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-52
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-51
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-51
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-51
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-50
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-50
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	7e-50
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-49
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	4e-49
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-48
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-48
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	6e-48
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-47
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	6e-47
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-45
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-45
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	4e-45
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	6e-45
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	1e-44
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-44
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-44
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	8e-44
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	9e-44
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-43
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-43
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-43
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	5e-43
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	8e-43
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-43
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-42
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-42
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	2e-42
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	3e-42
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-42
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-41
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	6e-41
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-40
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-40
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	7e-40
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	9e-40
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-39
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-39
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-39
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	5e-39
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	6e-39
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-39
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	8e-39
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-38
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-38
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	5e-38
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-38
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	7e-38
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	1e-37
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-37
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	2e-37
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-37
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	6e-37
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-36
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-36
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-36
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	3e-36
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-36
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-36
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-35
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-35
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	8e-35
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	9e-35
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-34
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-34
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-34
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-34
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-33
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-33
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-33
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-33
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-33
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-33
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	4e-33
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	5e-33
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	6e-33
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-32
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-32
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-32
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-32
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-32
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	9e-32
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-31
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	7e-31
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-31
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	8e-31
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-30
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-30
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-30
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-30
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-30
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	6e-30
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	1e-29
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-29
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-29
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-29
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-29
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-29
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	5e-29
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-29
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-29
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	8e-29
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	8e-29
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	9e-29
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	1e-28
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-28
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-28
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-28
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-28
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	7e-28
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	7e-28
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	9e-28
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-27
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	2e-27
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-27
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-27
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-27
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	9e-27
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	9e-27
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-26
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-26
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-26
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-26
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-26
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-26
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	4e-26
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-25
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	2e-25
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	3e-25
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	5e-25
pfam03822	58	pfam03822, NAF, NAF domain	7e-25
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-24
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-24
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-24
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	3e-24
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-24
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-24
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-24
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	6e-24
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	7e-24
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	2e-23
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-23
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	3e-23
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	5e-23
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-23
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-23
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	7e-23
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-23
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-22
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-22
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-22
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-22
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-22
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-22
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	5e-22
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-21
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-21
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-21
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-21
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-21
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-21
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-21
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	5e-21
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	8e-21
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-20
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-20
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-20
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-20
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	3e-20
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-20
cd12195	116	cd12195, CIPK_C, C-terminal regulatory domain of C	4e-20
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	5e-20
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-20
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-19
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-19
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-19
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-19
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	4e-19
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-19
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-19
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-18
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	1e-18
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	3e-18
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-18
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	9e-18
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	9e-18
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-17
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	1e-17
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-17
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	2e-17
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-17
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-17
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-17
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-17
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-17
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	6e-17
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-16
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-16
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-16
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-16
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-16
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-16
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-16
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	2e-16
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-16
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-16
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-16
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	5e-16
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	8e-16
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	9e-16
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-15
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-15
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-15
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	4e-15
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	6e-15
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	6e-15
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	2e-14
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-14
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	3e-14
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-13
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	3e-13
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-13
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-13
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	5e-13
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	6e-13
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-12
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-12
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	3e-12
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	4e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-12
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	5e-12
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	6e-12
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	7e-12
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	8e-12
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	9e-12
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-11
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-11
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-11
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	3e-11
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-11
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	7e-11
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	7e-11
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	9e-11
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-10
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-10
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	3e-10
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	5e-10
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	5e-10
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-09
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-09
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	5e-09
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	7e-09
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-08
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	2e-08
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-08
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	3e-08
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-08
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	8e-08
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	9e-08
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-07
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	3e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	3e-07
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	6e-07
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	1e-06
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-06
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	8e-06
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-06
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	2e-05
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	2e-05
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	2e-05
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	4e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	5e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-04
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	1e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	2e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	4e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	5e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	5e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	6e-04
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.002
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.002

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  311 bits (800), Expect = e-106
 Identities = 116/258 (44%), Positives = 169/258 (65%), Gaps = 8/258 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YE+   +GEG+F KV  A++++TG+ VA+KV+ K  I K R  ++I REI I+K ++HPN
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDR--ERILREIKILKKLKHPN 58

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IVRL++V     K+Y+++E+  GG+LFD +  +GRL E++ R Y +Q++ A+ + HSKG+
Sbjct: 59  IVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGI 118

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRDLKPEN+LLD  G++K++DFGL+     G E L T  GTP Y+APEVL  +GY   A
Sbjct: 119 VHRDLKPENILLDEDGHVKLADFGLARQLDPG-EKLTTFVGTPEYMAPEVLLGKGYGK-A 176

Query: 191 ADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFW---FSTGATSLIHKILD 246
            D+WS GVIL+ L+ G  PF G+  L  L+KKI   +   P      S  A  LI K+L 
Sbjct: 177 VDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLV 236

Query: 247 PNPKTRIRIEGIRKHPWF 264
            +P+ R+  E   +HP+F
Sbjct: 237 KDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  273 bits (700), Expect = 8e-91
 Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 8/261 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YE+ R +G G+F  V  A+++ TG+ VA+K+L K +  K +     +REI I++ + HPN
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSE-KSKKDQTARREIRILRRLSHPN 59

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IVRL +    +  +Y+++E+  GG+LFD +   G L E++ ++   Q++  + + HS G+
Sbjct: 60  IVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGI 119

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRDLKPEN+LLD  G +K++DFGL+    +    L T  GTP Y+APEVL      G  
Sbjct: 120 IHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPK 179

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-----EFSCPFWFSTG--ATSLIHK 243
            DVWS GVIL+ L+ G  PF   ++    + I        EF  P W S    A  LI K
Sbjct: 180 VDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKK 239

Query: 244 ILDPNPKTRIRIEGIRKHPWF 264
            L+ +P  R   E I +HPWF
Sbjct: 240 CLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  243 bits (623), Expect = 3e-79
 Identities = 99/251 (39%), Positives = 149/251 (59%), Gaps = 4/251 (1%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G+F KV   + ++TG+  AMKVL K  I+K + V+    E +I+  + HP IV+LH 
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHY 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
              +  K+Y++LE+  GGELF  +  +GR  E   R Y  +++ A+ + HS G+ +RDLK
Sbjct: 61  AFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
           PEN+LLD+ G++K++DFGL+          +T CGTP Y+APEVL  +GY G A D WS 
Sbjct: 121 PENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGY-GKAVDWWSL 179

Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI--- 253
           GV+L+ ++ G  PF   D   +Y+KI       P + S  A  LI  +L  +P  R+   
Sbjct: 180 GVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSG 239

Query: 254 RIEGIRKHPWF 264
             E I+ HP+F
Sbjct: 240 GAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  237 bits (606), Expect = 3e-76
 Identities = 92/260 (35%), Positives = 157/260 (60%), Gaps = 9/260 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E  +T+G G+F +V   +++ +G+  A+K+L+K+ I+K + V+ +  E  I++ +RHP 
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPF 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V L+      + +Y+++E+V GGELF  +   GR  E   R Y  Q++ A+ + HS  +
Sbjct: 63  LVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDI 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPENLLLDS G +K++DFG +   +      +T CGTP Y+APE++ ++GY G A
Sbjct: 123 VYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT---YTLCGTPEYLAPEIILSKGY-GKA 178

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D W+ G++++ ++AGY PF + +   +Y+KI   +   P +FS  A  LI  +L  +  
Sbjct: 179 VDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLT 238

Query: 251 TRI-----RIEGIRKHPWFR 265
            R+      +  I+ HPWF 
Sbjct: 239 KRLGNLKNGVNDIKNHPWFA 258

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  217 bits (556), Expect = 7e-70
 Identities = 89/248 (35%), Positives = 138/248 (55%), Gaps = 35/248 (14%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +GEG F  V  A++++TG+ VA+K++         +++++ REI I+K + HPNIV+L+ 
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKII--KKEDSSSLLEELLREIEILKKLNHPNIVKLYG 58

Query: 77  VLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
           V      +Y+++E+  GG L D +  ++G+L E++  R   Q+++ + + HS G+ HRDL
Sbjct: 59  VFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDL 118

Query: 136 KPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           KPEN+LLDS  G +K++DFGLS L      LL T  GTP Y+APEVL  +GY    +D+W
Sbjct: 119 KPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178

Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIR 254
           S GVIL+             LP L                     LI K+L  +P+ R  
Sbjct: 179 SLGVILYE------------LPELKD-------------------LIRKMLQKDPEKRPS 207

Query: 255 IEGIRKHP 262
            + I +H 
Sbjct: 208 AKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  212 bits (541), Expect = 6e-67
 Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 15/259 (5%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G F +V   + +    + A+K + K  I++    + I  E  I++   HP IV+L+ 
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
               +  +Y+++E+  GGEL+  +  +G   E   R Y   ++ A  + H++G+ +RDLK
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
           PENLLLDS G +K+ DFG  A   +  +   T CGTP YVAPE++ N+GYD  + D WS 
Sbjct: 121 PENLLLDSNGYVKLVDFG-FAKKLKSGQKTWTFCGTPEYVAPEIILNKGYD-FSVDYWSL 178

Query: 197 GVILFVLMAGYLPFGETDLPTL--YKKINAA----EFSCPFWFSTGATSLIHKILDPNPK 250
           G++L+ L+ G  PFGE D   +  Y  I       EF  P +    A  LI ++L  NP+
Sbjct: 179 GILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF--PNYIDKAAKDLIKQLLRRNPE 236

Query: 251 TRI-----RIEGIRKHPWF 264
            R+      I+ I+KH WF
Sbjct: 237 ERLGNLKGGIKDIKKHKWF 255

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  210 bits (538), Expect = 3e-66
 Identities = 89/280 (31%), Positives = 149/280 (53%), Gaps = 28/280 (10%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE-ISIMKIVRHP 69
           ++ G+ IGEG+F+ V  A+ +ET +  A+K+L K  ++K + V  +K E   + ++  HP
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHP 62

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
            I++L+        +Y +LE+   GEL   I   G L E   R Y  +++ A+ + HSKG
Sbjct: 63  GIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG 122

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFG--------LSALPQQGVELLHTT------------ 169
           + HRDLKPEN+LLD   ++K++DFG         S    +G      +            
Sbjct: 123 IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASF 182

Query: 170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFS 228
            GT  YV+PE+L+     G ++D+W+ G I++ ++ G  PF G  +  T ++KI   E+S
Sbjct: 183 VGTAEYVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-FQKILKLEYS 240

Query: 229 CPFWFSTGATSLIHKILDPNPKTRIRI----EGIRKHPWF 264
            P  F   A  LI K+L  +P+ R+ +    + ++ HP+F
Sbjct: 241 FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  203 bits (519), Expect = 7e-63
 Identities = 100/264 (37%), Positives = 156/264 (59%), Gaps = 9/264 (3%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +++ +E+G T+G G+F +VR A+++ TGE  A+K L K  ILK + V  + +E SI+  +
Sbjct: 16  KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL 75

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            HP IV +        +VY +LEFV GGELF  +   GR   +  + Y  +L+ A  + H
Sbjct: 76  SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLH 135

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           SK + +RDLKPENLLLD+ G++KV+DFG +   ++  +   T CGTP Y+APEV+ ++G+
Sbjct: 136 SKDIIYRDLKPENLLLDNKGHVKVTDFGFA---KKVPDRTFTLCGTPEYLAPEVIQSKGH 192

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            G A D W+ GV+L+  +AGY PF +     +Y+KI A     P WF   A  L+  +L 
Sbjct: 193 -GKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQ 251

Query: 247 PNPKTRI-----RIEGIRKHPWFR 265
            +   R+      +  ++ HP+F 
Sbjct: 252 TDHTKRLGTLKGGVADVKNHPYFH 275

Length = 329

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  201 bits (514), Expect = 8e-63
 Identities = 83/256 (32%), Positives = 140/256 (54%), Gaps = 11/256 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKIVR 67
           KYE+ + IG+G+F KV   + +  G+   +K   L+  +  K R  +    E+ I+K + 
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSE-KER--EDALNEVKILKKLN 57

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKI---VHQGRLL-ENDCRRYFQQLIDAVA 123
           HPNI++ +E    + K+ I++E+  GG+L  KI     +G+   E     +F QL  A+ 
Sbjct: 58  HPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALK 117

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           + HS+ + HRD+KP+N+ L S G +K+ DFG+S +    V+L  T  GTP Y++PE+  N
Sbjct: 118 YLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQN 177

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIH 242
           + Y+   +D+WS G +L+ L     PF   +L  L  KI   ++   P  +S+   +L+ 
Sbjct: 178 KPYN-YKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVS 236

Query: 243 KILDPNPKTRIRIEGI 258
            +L  +P+ R  I  I
Sbjct: 237 SLLQKDPEERPSIAQI 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  200 bits (511), Expect = 2e-62
 Identities = 85/261 (32%), Positives = 146/261 (55%), Gaps = 14/261 (5%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           I +G + +V  A+ + TG+  A+KV+ K+ +++   VDQ+  E  I+   + P +V+L+ 
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYY 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
               +  +Y+++E++ GG+L   + + G L E+  R Y  +++ A+ + HS G+ HRDLK
Sbjct: 61  SFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELL--------HTTCGTPNYVAPEVLSNRGYDG 188
           P+N+L+DS G+LK++DFGLS +     ++             GTP+Y+APEV+  +G+  
Sbjct: 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGH-S 179

Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP--FWFSTGATSLIHKILD 246
              D WS G IL+  + G  PF       +++ I   +   P     S  A  LI K+L 
Sbjct: 180 KTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLV 239

Query: 247 PNPKTRI---RIEGIRKHPWF 264
           P+P+ R+    IE I+ HP+F
Sbjct: 240 PDPEKRLGAKSIEEIKNHPFF 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  197 bits (504), Expect = 3e-61
 Identities = 82/262 (31%), Positives = 139/262 (53%), Gaps = 9/262 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++  G  +G G+F  V  A +++TGE +A+K + + +      ++ ++REI I+  ++HP
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSV-ELSGDSEEELEALEREIRILSSLQHP 59

Query: 70  NIVRL--HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIVR    E    +  + I LE+V+GG L   +   G+L E   R+Y +Q+++ +A+ HS
Sbjct: 60  NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHS 119

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRG 185
            G+ HRD+K  N+L+DS G +K++DFG +         E   +  GTP ++APEV+    
Sbjct: 120 NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE 179

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPF--WFSTGATSLIH 242
           Y G AAD+WS G  +  +  G  P+ E  +      KI ++          S  A   + 
Sbjct: 180 Y-GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLR 238

Query: 243 KILDPNPKTRIRIEGIRKHPWF 264
           K L  +PK R   + + +HP+ 
Sbjct: 239 KCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  184 bits (469), Expect = 2e-55
 Identities = 99/258 (38%), Positives = 149/258 (57%), Gaps = 10/258 (3%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + +G+G+F KV   R     + G+  AMKVL K+T LK R   + K E  I+  V HP I
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT-LKVRDRVRTKMERDILAEVNHPFI 60

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           V+LH    +  K+Y+IL+F+ GG+LF ++  +    E D + Y  +L  A+ H HS G+ 
Sbjct: 61  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 120

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           +RDLKPEN+LLD  G++K++DFGLS       +  ++ CGT  Y+APEV++ RG+   +A
Sbjct: 121 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHT-QSA 179

Query: 192 DVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKT 251
           D WS GV++F ++ G LPF   D       I  A+   P + S  A SL+  +   NP  
Sbjct: 180 DWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPAN 239

Query: 252 RI-----RIEGIRKHPWF 264
           R+      +E I++HP+F
Sbjct: 240 RLGAGPDGVEEIKRHPFF 257

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  181 bits (462), Expect = 9e-55
 Identities = 86/271 (31%), Positives = 154/271 (56%), Gaps = 14/271 (5%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
              E  +T+G GTF +V   ++R +    A+KV+A   +++ +    +  E  ++K V H
Sbjct: 1   DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH 60

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           P I+RL      +  +Y+++E+V GGELF  + + GR   +    Y  +++ A+ + HSK
Sbjct: 61  PFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK 120

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            + +RDLKPEN+LLD  G++K++DFG +   ++  +   T CGTP Y+APEV+ ++G+  
Sbjct: 121 EIVYRDLKPENILLDKEGHIKLTDFGFA---KKLRDRTWTLCGTPEYLAPEVIQSKGH-N 176

Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            A D W+ G++++ ++ GY PF + +   +Y+KI A +   P      A  LI K+L   
Sbjct: 177 KAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLV-V 235

Query: 249 PKTRIRI-------EGIRKHPWFRK-NYNPV 271
            +TR R+       + ++ H WF+  +++ V
Sbjct: 236 DRTR-RLGNMKNGADDVKNHRWFKSVDWDDV 265

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  181 bits (460), Expect = 4e-54
 Identities = 96/281 (34%), Positives = 155/281 (55%), Gaps = 22/281 (7%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRM-VDQIKREISIMKIVRHPN 70
           + +G+G + KV   R     +TG+  AMKVL K+TI++++      K E +I++ V+HP 
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPF 61

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV L     +  K+Y+ILE+++GGELF  +  +G  +E+    Y  ++  A+ H H +G+
Sbjct: 62  IVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD+ G++K++DFGL         + HT CGT  Y+APE+L   G+ G A
Sbjct: 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGH-GKA 180

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D WS G +++ ++ G  PF   +      KI   + + P + +  A  L+ K+L  NP 
Sbjct: 181 VDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPS 240

Query: 251 TRI-----RIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHA 286
           +R+         ++ HP+FR             VN DD+ A
Sbjct: 241 SRLGAGPGDAAEVQSHPFFR------------HVNWDDLLA 269

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  176 bits (449), Expect = 3e-53
 Identities = 80/260 (30%), Positives = 139/260 (53%), Gaps = 9/260 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ R IG+G F KV   Q R+T +  AMK + K   ++   V  +  E  I++ + HP 
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPF 61

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V L         +Y++++ + GG+L   +  + +  E   + +  +++ A+ + HSKG+
Sbjct: 62  LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGI 121

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+KP+N+LLD  G++ ++DF ++        L  +T GTP Y+APEVL  +GY   A
Sbjct: 122 IHRDIKPDNILLDEQGHVHITDFNIATKVTPD-TLTTSTSGTPGYMAPEVLCRQGY-SVA 179

Query: 191 ADVWSCGVILFVLMAGYLPF-GETDLPT---LYKKINAAEFSCPFWFSTGATSLIHKILD 246
            D WS GV  +  + G  P+ G +         K+  A       W ST A   I+K+L+
Sbjct: 180 VDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATW-STEAIDAINKLLE 238

Query: 247 PNPKTRI--RIEGIRKHPWF 264
            +P+ R+   ++ ++ HP+F
Sbjct: 239 RDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  180 bits (456), Expect = 5e-53
 Identities = 100/320 (31%), Positives = 154/320 (48%), Gaps = 30/320 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y + R +GEG+F +V  A++R+    VA+KVLAK    K + V++  REI I+  + HP
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHP 57

Query: 70  -NIVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLLENDCRRYFQQLIDAVAHC 125
            NIV+L++       +Y+++E+V GG L D +     +G L E++      Q++ A+ + 
Sbjct: 58  PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117

Query: 126 HSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSAL------PQQGVELLHTTCGTPNYVAP 178
           HSKG+ HRD+KPEN+LLD  G  +K+ DFGL+ L            L  T+ GTP Y+AP
Sbjct: 118 HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAP 177

Query: 179 EVLS--NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAEF----- 227
           EVL   +  Y  S++D+WS G+ L+ L+ G  PF      +      K I          
Sbjct: 178 EVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237

Query: 228 ----SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDD 283
               S P   S  A+ L+ K+L  +PK R+       H               + +  DD
Sbjct: 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKES-DLSDLLKPDD 296

Query: 284 VHAVFDDIEDQYVAEQSENK 303
              +   +     A  S   
Sbjct: 297 SAPLRLSLPPSLEALISSLN 316

Length = 384

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  176 bits (448), Expect = 2e-52
 Identities = 91/260 (35%), Positives = 150/260 (57%), Gaps = 13/260 (5%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVR 73
           + +G+G+F KV  A+ + T E  A+KVL K  IL+   V+    E  ++ +  +HP + +
Sbjct: 1   KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    ++ +++ ++E+V GG+L   I   GR  E   R Y  +++  +   H +G+ +R
Sbjct: 61  LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DLK +N+LLDS G++K++DFG+    ++G+    TT   CGTP+Y+APE+LS + Y G A
Sbjct: 121 DLKLDNVLLDSEGHIKIADFGMC---KEGILGGVTTSTFCGTPDYIAPEILSYQPY-GPA 176

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D W+ GV+L+ ++AG  PF   D   L++ I   E   P W S  A S++   L  NP+
Sbjct: 177 VDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPE 236

Query: 251 TRIRI-----EGIRKHPWFR 265
            R+       + I+ HP+FR
Sbjct: 237 KRLGCLPTGEQDIKGHPFFR 256

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  173 bits (441), Expect = 2e-51
 Identities = 89/253 (35%), Positives = 138/253 (54%), Gaps = 4/253 (1%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F KV   + R+T    A+K + K+ I+    V     E +++  V  P IV L  
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKF 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
              S  K+Y++L F+ GGELF  +  +GR   +  R Y  +L+ A+ + H   V +RDLK
Sbjct: 61  SFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
           PEN+LLD  G++ + DFGL  L  +  +  +T CGTP Y+APE+L   GY   A D W+ 
Sbjct: 121 PENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYT-KAVDWWTL 179

Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           GV+L+ ++ G  PF + ++  +Y+KI       P  F   A  L+  +L  +P  R+   
Sbjct: 180 GVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYN 239

Query: 257 G---IRKHPWFRK 266
           G   I+ HP+F +
Sbjct: 240 GAQEIKNHPFFSQ 252

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  174 bits (442), Expect = 3e-51
 Identities = 94/317 (29%), Positives = 159/317 (50%), Gaps = 31/317 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G + +V  A+ ++TGE VA+K + KS + K   V  +  E  I+   +   +V+L  
Sbjct: 9   VGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLY 68

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  +Y+ +E+V GG+    + + G L E+  R Y  ++ +AV   H  G  HRDLK
Sbjct: 69  AFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLK 128

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
           PEN L+D+ G++K++DFGLS      V   ++  G+P+Y+APEVL  +GYD +  D WS 
Sbjct: 129 PENFLIDASGHIKLTDFGLSK---GIVTYANSVVGSPDYMAPEVLRGKGYDFT-VDYWSL 184

Query: 197 GVILFVLMAGYLPFG-----ETDLPTLY--KKINAAEFSCP-FWFSTGATSLIHKILDPN 248
           G +L+  + G+ PF      ET     Y  + +    +  P F  S  A  LI K+++ +
Sbjct: 185 GCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLIN-D 243

Query: 249 PKTRIR-IEGIRKHPWFRK-NYNPVKCSE----------------EEEVNLDDVHAVFDD 290
           P  R   +E I+ HP+F++ ++N ++  +                ++  N DD+    D 
Sbjct: 244 PSRRFGSLEDIKNHPFFKEVDWNELRELKPPFVPELESEIDTGYFDDFENEDDMAKYKDV 303

Query: 291 IEDQYVAEQSENKVGGP 307
            E +  A +       P
Sbjct: 304 HEKKKAAGKGGANGRDP 320

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  171 bits (435), Expect = 4e-51
 Identities = 77/208 (37%), Positives = 121/208 (58%), Gaps = 9/208 (4%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           G  IG GTF KV  A N +TGE +A+K +        + + +I  E+ ++++++HPN+V+
Sbjct: 5   GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQD-NDPKTIKEIADEMKVLELLKHPNLVK 63

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCHSKGVYH 132
            + V   R KVYI +E+ +GG L + ++  GR+L E+  R Y  QL++ +A+ HS G+ H
Sbjct: 64  YYGVEVHREKVYIFMEYCSGGTLEE-LLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVH 122

Query: 133 RDLKPENLLLDSYGNLKVSDFG----LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
           RD+KP N+ LD  G +K+ DFG    L        E + +  GTP Y+APEV++     G
Sbjct: 123 RDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKG 182

Query: 189 --SAADVWSCGVILFVLMAGYLPFGETD 214
              AAD+WS G ++  +  G  P+ E D
Sbjct: 183 HGRAADIWSLGCVVLEMATGKRPWSELD 210

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  169 bits (430), Expect = 2e-50
 Identities = 88/259 (33%), Positives = 140/259 (54%), Gaps = 17/259 (6%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLH 75
           I +G F  V  A+ R TG+  A+KVL KS ++    V  +K E +IM I    P + +L+
Sbjct: 4   ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLY 63

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
               S+  +Y+++E++ GG+    I   G L E+  ++Y  +++  V   H +G+ HRD+
Sbjct: 64  YSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           KPENLL+D  G+LK++DFGLS    +         GTP+Y+APE +   G D   +D WS
Sbjct: 124 KPENLLIDQTGHLKLTDFGLS----RNGLENKKFVGTPDYLAPETILGVG-DDKMSDWWS 178

Query: 196 CGVILFVLMAGYLPFGETDLP------TLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
            G ++F  + GY PF   + P       L ++IN  E    F  S  A  LI+++L  +P
Sbjct: 179 LGCVIFEFLFGYPPF-HAETPDAVFDNILSRRINWPEEVKEF-CSPEAVDLINRLLCMDP 236

Query: 250 KTRIR---IEGIRKHPWFR 265
             R+     + I+ HP+F+
Sbjct: 237 AKRLGANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  170 bits (433), Expect = 3e-50
 Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 12/259 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           + IG+G+F KV  A+++  G+  A+KVL K  ILK +    I  E +++ K V+HP +V 
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  K+Y +L++V GGELF  +  +    E   R Y  ++  A+ + HS  + +R
Sbjct: 61  LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DLKPEN+LLDS G++ ++DFGL    ++G+E   TT   CGTP Y+APEVL  + YD   
Sbjct: 121 DLKPENILLDSQGHVVLTDFGLC---KEGIEHSKTTSTFCGTPEYLAPEVLRKQPYD-RT 176

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D W  G +L+ ++ G  PF   D   +Y  I           S  A  L+  +L  +  
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRT 236

Query: 251 TRI----RIEGIRKHPWFR 265
            R+        I+ H +F 
Sbjct: 237 KRLGAKDDFLEIKNHVFFS 255

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  170 bits (433), Expect = 7e-50
 Identities = 98/325 (30%), Positives = 156/325 (48%), Gaps = 48/325 (14%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +EV + IG G F +V   ++++TG+  AMKVL KS ++K   +  ++ E  I+     P 
Sbjct: 3   FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV+L+        +Y+++E++ GG+L + ++ +    E   R Y  +L+ A+   H  G 
Sbjct: 63  IVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGF 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA----------LPQQGVELL-------------- 166
            HRD+KP+N+L+D+ G++K++DFGL                   LL              
Sbjct: 123 IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQ 182

Query: 167 -----HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK 220
                ++T GTP+Y+APEVL    Y     D WS GVIL+ ++ G+ PF  +T   T  K
Sbjct: 183 RRVRANSTVGTPDYIAPEVLRGTPYGLE-CDWWSLGVILYEMLYGFPPFYSDTLQETYNK 241

Query: 221 KINAAE-FSCPF--WFSTGATSLIHKILDPNPKTRI-RIEGIRKHPWFRK--------NY 268
            IN  E    P     S  A  LI ++L   P+ R+   E I+ HP+F+           
Sbjct: 242 IINWKESLRFPPDPPVSPEAIDLICRLLCD-PEDRLGSFEEIKSHPFFKGIDWENLRETK 300

Query: 269 NPVKCSEEEEVNLDDVHAVFDDIED 293
            P       E++     + FDD ED
Sbjct: 301 PPFV----PELSSPLDTSNFDDFED 321

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  167 bits (424), Expect = 2e-49
 Identities = 82/265 (30%), Positives = 136/265 (51%), Gaps = 14/265 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            YEV  TIG+G+F  VR  + +  G+ +  K +     +  +   Q+  E++I++ ++HP
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN-MTEKEKQQLVSEVNILRELKHP 59

Query: 70  NIVRL--HEVLASRTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVA 123
           NIVR     +  S   +YI++E+  GG+L   I      +  + E    R   QL+ A+ 
Sbjct: 60  NIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALY 119

Query: 124 HCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
            CH++      V HRDLKP N+ LD+  N+K+ DFGL+ +         T  GTP Y++P
Sbjct: 120 ECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSP 179

Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-PFWFSTGA 237
           E L++  YD   +D+WS G +++ L A   PF   +   L  KI   +F   P+ +S+  
Sbjct: 180 EQLNHMSYD-EKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSEL 238

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHP 262
             +I  +L+ +P  R   E + + P
Sbjct: 239 NEVIKSMLNVDPDKRPSTEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  165 bits (421), Expect = 4e-49
 Identities = 76/256 (29%), Positives = 128/256 (50%), Gaps = 3/256 (1%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y++G  IG G F  V    N ETG+ VA+K ++   I +  +   I +EI ++K ++HP
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEAL-KSIMQEIDLLKNLKHP 59

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV+    + +   +YIILE+   G L   I   G   E+    Y  Q++  +A+ H +G
Sbjct: 60  NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG 119

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRD+K  N+L    G +K++DFG++       +   +  GTP ++APEV+   G   +
Sbjct: 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGAS-T 178

Query: 190 AADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           A+D+WS G  +  L+ G  P+ +   +  L++ +       P   S      + +    +
Sbjct: 179 ASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKD 238

Query: 249 PKTRIRIEGIRKHPWF 264
           P  R   + + KHPW 
Sbjct: 239 PNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  163 bits (416), Expect = 2e-48
 Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 11/259 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +E+   IG+G F +V  A+++ TG+ VA+KV+ K    + +  ++I  EI I+K  +HP
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVI-KLESKEKK--EKIINEIQILKKCKHP 57

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           NIV+ +     + +++I++EF +GG L D +      L E+      ++L+  + + HS 
Sbjct: 58  NIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN 117

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
           G+ HRD+K  N+LL S G +K+ DFGLSA         +T  GTP ++APEV++ + YD 
Sbjct: 118 GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDY 176

Query: 189 SAADVWSCGVILFVLMA-GYLPFGE-TDLPTLYK--KINAAEFSCPFWFSTGATSLIHKI 244
             AD+WS G I  + +A G  P+ E   +  L+K           P  +S      + K 
Sbjct: 177 -KADIWSLG-ITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKC 234

Query: 245 LDPNPKTRIRIEGIRKHPW 263
           L  NP+ R   E + KHP+
Sbjct: 235 LQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score =  165 bits (419), Expect = 3e-48
 Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 12/258 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           + IG+G+F KV  A+ +  G   A+KVL K TILK +  + I  E +++ K ++HP +V 
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  K+Y +L++V GGELF  +  +   LE   R Y  ++  A+ + HS  + +R
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DLKPEN+LLDS G++ ++DFGL    ++GVE   TT   CGTP Y+APEVL    YD   
Sbjct: 121 DLKPENILLDSQGHVVLTDFGLC---KEGVEPEETTSTFCGTPEYLAPEVLRKEPYD-RT 176

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D W  G +L+ ++ G  PF   D+  +Y  I       P   +  A  L+  +L  + +
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQR 236

Query: 251 TRIRIEG----IRKHPWF 264
            R+  +     I+ H +F
Sbjct: 237 RRLGAKADFLEIKNHVFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  163 bits (415), Expect = 6e-48
 Identities = 94/272 (34%), Positives = 152/272 (55%), Gaps = 18/272 (6%)

Query: 11  YEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIV 66
           +E+ R +G G + KV   R     + G+  AMKVL K+TI+ K +  +  + E  +++ V
Sbjct: 2   FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61

Query: 67  RH-PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           R  P +V LH    + TK+++IL++V GGELF  +  +    E++ R Y  +++ A+ H 
Sbjct: 62  RRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHL 121

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSN 183
           H  G+ +RD+K EN+LLDS G++ ++DFGLS   L ++  E  ++ CGT  Y+APEV+  
Sbjct: 122 HQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE-ERAYSFCGTIEYMAPEVI-R 179

Query: 184 RGYDG--SAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAEFSCPFWFSTGA 237
            G  G   A D WS GV+ F L+ G  PF     +     + ++I  ++   P   S  A
Sbjct: 180 GGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEA 239

Query: 238 TSLIHKILDPNPKTRIRIEG---IRKHPWFRK 266
              I K+L+ +PK R+   G   I+ HP+F+ 
Sbjct: 240 RDFIQKLLEKDPKKRLGANGADEIKNHPFFQG 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  162 bits (412), Expect = 2e-47
 Identities = 87/311 (27%), Positives = 139/311 (44%), Gaps = 86/311 (27%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLA---------KSTILKHRMVDQIKREIS 61
           YE    +GEGT+  V  A++++TGE VA+K +           + +          REIS
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTAL----------REIS 50

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGE-----LFDKIVHQGRLLENDCRRYFQ 116
           ++K ++HPNIV+L +V+ +  K+Y++ E+    +       DK    G L  N  +    
Sbjct: 51  LLKELKHPNIVKLLDVIHTERKLYLVFEYC---DMDLKKYLDK--RPGPLSPNLIKSIMY 105

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-- 174
           QL+  +A+CHS  + HRDLKP+N+L++  G LK++DFGL+              G P   
Sbjct: 106 QLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLA-----------RAFGIPLRT 154

Query: 175 ---------YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK--- 220
                    Y APE+L  ++ Y  +A D+WS G I   ++ G   F G++++  L+K   
Sbjct: 155 YTHEVVTLWYRAPEILLGSKHY-STAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQ 213

Query: 221 ----------------KINAAEFSCPFW-----------FSTGATSLIHKILDPNPKTRI 253
                                 F  P +                  L+ K+L  NP  RI
Sbjct: 214 ILGTPTEESWPGVTKLPDYKPTF--PKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI 271

Query: 254 RIEGIRKHPWF 264
             +   KHP+F
Sbjct: 272 SAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  162 bits (411), Expect = 6e-47
 Identities = 88/259 (33%), Positives = 138/259 (53%), Gaps = 12/259 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG+  AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 1   KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS  V +RD
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSAA 191
           LK ENL+LD  G++K++DFGL    ++G+    T    CGTP Y+APEVL +  Y G A 
Sbjct: 121 LKLENLMLDKDGHIKITDFGLC---KEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAV 176

Query: 192 DVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKT 251
           D W  GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK 
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQ 236

Query: 252 RI-----RIEGIRKHPWFR 265
           R+       + I +H +F 
Sbjct: 237 RLGGGPEDAKEIMEHRFFA 255

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  155 bits (395), Expect = 3e-45
 Identities = 71/263 (26%), Positives = 129/263 (49%), Gaps = 13/263 (4%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           E  + +G+G+   V   +++ TG+  A+K +      + R   Q+ RE+  ++    P +
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRK--QLLRELKTLRSCESPYV 61

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GV 130
           V+ +       ++ I+LE++ GG L D +   G++ E       +Q++  + + H+K  +
Sbjct: 62  VKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHI 121

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+KP NLL++S G +K++DFG+S + +  ++  +T  GT  Y++PE +        A
Sbjct: 122 IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGE-SYSYA 180

Query: 191 ADVWSCGVILFVLMAGYLPF---GETDLPTLYKKINAAEFSCPFW----FSTGATSLIHK 243
           AD+WS G+ L     G  PF   G+     L + I   +   P      FS      I  
Sbjct: 181 ADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC--DGPPPSLPAEEFSPEFRDFISA 238

Query: 244 ILDPNPKTRIRIEGIRKHPWFRK 266
            L  +PK R     + +HP+ +K
Sbjct: 239 CLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score =  157 bits (399), Expect = 3e-45
 Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 1/239 (0%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 60

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 61  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y G A D W
Sbjct: 121 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWW 179

Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 180 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score =  157 bits (398), Expect = 4e-45
 Identities = 88/258 (34%), Positives = 144/258 (55%), Gaps = 12/258 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           + IG+G+F KV  A+ +  G+  A+KVL K  +L  +    I  E +++ K V+HP +V 
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  K+Y +L+FV GGELF  +  +    E   R Y  ++  A+ + HS  + +R
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DLKPEN+LLDS G++ ++DFGL    ++G+    TT   CGTP Y+APEV+  + YD + 
Sbjct: 121 DLKPENILLDSQGHVVLTDFGLC---KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT- 176

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D W  G +L+ ++ G  PF   D+  +Y  I           S  A S++ ++L+ + +
Sbjct: 177 VDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQ 236

Query: 251 TRIRIEG----IRKHPWF 264
            R+  +     I++HP+F
Sbjct: 237 RRLGAKEDFLEIQEHPFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  158 bits (401), Expect = 6e-45
 Identities = 91/300 (30%), Positives = 140/300 (46%), Gaps = 47/300 (15%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E  + IG G F +VR  Q ++TG   AMK L KS +L+   V  ++ E  I+    +P 
Sbjct: 3   FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V+L+        +Y+I+E++ GG++   ++ +    E + R Y  + I A+   H  G 
Sbjct: 63  VVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGL---------------------------SALPQQGV 163
            HRD+KP+NLLLD+ G++K+SDFGL                            + P    
Sbjct: 123 IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSK 182

Query: 164 ELLHT-----------TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
               T           T GTP+Y+APEV    GY     D WS GVI++ ++ GY PF  
Sbjct: 183 RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGY-NKECDWWSLGVIMYEMLVGYPPFCS 241

Query: 213 TDLPTLYKKI-NAAE---FSCPFWFSTGATSLIHKILDPNPKTRIRIEG---IRKHPWFR 265
            +    Y+KI N  E   F      S  A  LI ++     + R+   G   I+ HP+F+
Sbjct: 242 DNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLC-CEAERRLGNNGVNEIKSHPFFK 300

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  156 bits (396), Expect = 1e-44
 Identities = 84/260 (32%), Positives = 140/260 (53%), Gaps = 9/260 (3%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVR 73
           + +G+G+F KV  A+ + T E  A+KVL K  IL+   VD    E  I+ +   HP +  
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    ++ +++ ++E+V GG+L  +I    +  E   R Y  ++  A+   H  GV +R
Sbjct: 61  LHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD+ G+ K++DFG+            T CGTP+Y+APE+L    Y G + D 
Sbjct: 121 DLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEY-GPSVDW 179

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W+ GV+++ +MAG  PF   +   L++ I   +   P W S  A S++   +  NP  R+
Sbjct: 180 WALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRL 239

Query: 254 RI-------EGIRKHPWFRK 266
                    + I++HP+F++
Sbjct: 240 GCVASQGGEDAIKQHPFFKE 259

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  156 bits (396), Expect = 1e-44
 Identities = 98/310 (31%), Positives = 171/310 (55%), Gaps = 25/310 (8%)

Query: 11  YEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIV 66
           +E+ + +G G + KV   R     +TG+  AMKVL K+ ++ K + V+  + E ++++ V
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61

Query: 67  RH-PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           R  P +V LH    +  K+++IL++V+GGE+F  +  +    E++ R Y  ++I A+ H 
Sbjct: 62  RQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHL 121

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNR 184
           H  G+ +RD+K EN+LLDS G++ ++DFGLS     +  E  ++ CGT  Y+APE++  +
Sbjct: 122 HKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGK 181

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF---GETDLPT-LYKKINAAEFSCPFWFSTGATSL 240
           G  G A D WS G+++F L+ G  PF   GE +  + + ++I   +   P +    A  L
Sbjct: 182 GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDL 241

Query: 241 IHKILDPNPKTRI-----RIEGIRKHPWF----------RKNYNPVKCSEEEEVNLDDVH 285
           +HK+L  +PK R+         I++HP+F          RK   P + S   E+++ +  
Sbjct: 242 LHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFRPSIRNELDVGNFA 301

Query: 286 AVFDDIEDQY 295
             F ++E  Y
Sbjct: 302 EEFTNLEPVY 311

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score =  155 bits (393), Expect = 3e-44
 Identities = 82/239 (34%), Positives = 130/239 (54%), Gaps = 1/239 (0%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + +G+  AMK+L K  I+    V     E  ++K  RHP +  L
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                ++ ++  ++E+V GGELF  +  +    E+  R Y  +++ A+ + HS  + +RD
Sbjct: 61  KYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LK ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y G A D W
Sbjct: 121 LKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDY-GRAVDWW 179

Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   +   P   S  A SL+  +L  +P  R+
Sbjct: 180 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score =  154 bits (390), Expect = 8e-44
 Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 12/267 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++V   +G G F +V+  + + TG+  AMKV+ KS +L    V   + E  I+ I   P 
Sbjct: 3   FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I +L      +  +Y+++E+  GG+L   +  ++ +  E+  + Y  +L+ A+   H  G
Sbjct: 63  IPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG 122

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSN-RGYD 187
             HRD+KPEN+L+D  G++K++DFG +A L    +       GTP+Y+APEVL+   G  
Sbjct: 123 YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDG 182

Query: 188 GSAADV----WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGATS 239
                V    WS GVI + ++ G  PF E      Y  I   +    F      S+    
Sbjct: 183 KGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLD 242

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           LI  +L    K R+  EG+  HP+F K
Sbjct: 243 LIQSLL-CGQKERLGYEGLCCHPFFSK 268

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score =  154 bits (390), Expect = 9e-44
 Identities = 88/267 (32%), Positives = 147/267 (55%), Gaps = 17/267 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVR 73
           R IG G++AKV   + ++T    AMKV+ K  +     +D ++ E  + +    HP +V 
Sbjct: 1   RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    + ++++ ++EFV+GG+L   +  Q +L E   R Y  ++  A+   H +G+ +R
Sbjct: 61  LHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD+ G++K++D+G+     +  +   T CGTPNY+APE+L    Y  S  D 
Sbjct: 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFS-VDW 179

Query: 194 WSCGVILFVLMAGYLPF---GETDLPT------LYKKINAAEFSCPFWFSTGATSLIHKI 244
           W+ GV++F +MAG  PF   G +D P       L++ I   +   P   S  A+S++   
Sbjct: 180 WALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGF 239

Query: 245 LDPNPKTRI---RIEG---IRKHPWFR 265
           L+ +PK R+      G   I+ HP+FR
Sbjct: 240 LNKDPKERLGCHPQTGFRDIKSHPFFR 266

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  153 bits (388), Expect = 1e-43
 Identities = 86/258 (33%), Positives = 139/258 (53%), Gaps = 8/258 (3%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVR 73
           R +G+G+F KV  A+ +E+G   A+KVL K  IL+   V+    E  I+ + R HP + +
Sbjct: 1   RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           L+    +  +++ ++EFV GG+L   I    R  E   R Y  ++  A+   H KG+ +R
Sbjct: 61  LYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD  G+ K++DFG+        +   T CGTP+Y+APE+L    Y G + D 
Sbjct: 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLY-GPSVDW 179

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W+ GV+L+ ++ G+ PF   +   L++ I   E   P W S  A  ++   +  NP  R+
Sbjct: 180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRL 239

Query: 254 RI------EGIRKHPWFR 265
                   E I +HP+F+
Sbjct: 240 GSLTLGGEEAILRHPFFK 257

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  153 bits (388), Expect = 2e-43
 Identities = 84/258 (32%), Positives = 138/258 (53%), Gaps = 10/258 (3%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK---IVRHPNIVR 73
           IG+GTF +V   + ++T    AMKVL+K  I+  + V     E +I+    +   P IV 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           L     + + +Y++ ++++GGELF  +  +GR  E+  + Y  +L+ A+ H H   + +R
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV-LSNRGYDGSAAD 192
           DLKPEN+LLD+ G++ + DFGLS       +  +T CGT  Y+APEV L  +GY     D
Sbjct: 121 DLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGY-TKHVD 179

Query: 193 VWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF-WFSTGATSLIHKILDPNPKT 251
            WS GV++F +  G+ PF   D   +Y+ I   +   P    S      +  +L+ NP+ 
Sbjct: 180 FWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQH 239

Query: 252 RI----RIEGIRKHPWFR 265
           R+        +++HP+F 
Sbjct: 240 RLGAHRDAVELKEHPFFA 257

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  152 bits (385), Expect = 2e-43
 Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 37/287 (12%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRH 68
           Y+    IGEGT+  V  A+++ TGE VA+K +                 REI ++K + H
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF---ESEGIPKTALREIKLLKELNH 57

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-CRRYFQQLIDAVAHCHS 127
           PNI++L +V   +  +Y++ EF+   +L+  I  + R L     + Y  QL+  +A CHS
Sbjct: 58  PNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHS 116

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            G+ HRDLKPENLL+++ G LK++DFGL+      V        T  Y APE+L      
Sbjct: 117 HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGY 176

Query: 188 GSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYKKINAAEFS 228
            +  D+WS G I   L++    F                        P         +FS
Sbjct: 177 STPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS 236

Query: 229 CPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            P              S  A  L+ ++L  +P  RI  E    HP+F
Sbjct: 237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  150 bits (382), Expect = 5e-43
 Identities = 89/289 (30%), Positives = 139/289 (48%), Gaps = 38/289 (13%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++   IGEG    V  A++RETGE+VA+K +A    L+  + +Q  REI  ++  +HP
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVA-LRRLEGGIPNQALREIKALQACQHP 59

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSK 128
            +V+L +V    +   +++E++    L + +  + R L E   + Y + L+  VA+ H+ 
Sbjct: 60  YVVKLLDVFPHGSGFVLVMEYMPSD-LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN 118

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT-TCGTPNYVAPEVL-SNRGY 186
           G+ HRDLKP NLL+ + G LK++DFGL+ L  +    L++    T  Y APE+L   R Y
Sbjct: 119 GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKY 178

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETD------------------------LPTLYKK 221
           D    D+W+ G I   L+ G   F GE D                        LP  Y K
Sbjct: 179 D-PGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP-DYNK 236

Query: 222 INAAEFSCPFW------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
           I   E             S  A  L+  +L  +P  R+      +HP+F
Sbjct: 237 ITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  150 bits (381), Expect = 8e-43
 Identities = 97/300 (32%), Positives = 144/300 (48%), Gaps = 59/300 (19%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD----QIKREISIMKIV 66
           YE    IGEGT+ +V  A+N++TGE VA+K      I      +       REI +++ +
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALK-----KIRMENEKEGFPITAIREIKLLQKL 55

Query: 67  RHPNIVRLHEVLASRTK--VYIILEFV----TGGELFDKIVHQGRLLENDCRRYFQQLID 120
           RHPNIVRL E++ S+ K  +Y++ E++    TG  L D    + +  E+  + Y +QL++
Sbjct: 56  RHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTG--LLDS--PEVKFTESQIKCYMKQLLE 111

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG--TPNYVAP 178
            + + HS G+ HRD+K  N+L+++ G LK++DFGL A P         T    T  Y  P
Sbjct: 112 GLQYLHSNGILHRDIKGSNILINNDGVLKLADFGL-ARPYTKRNSADYTNRVITLWYRPP 170

Query: 179 EVL--SNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKI----------NAA 225
           E+L  + R Y G   D+WS G IL  L  G   F G T+L  L +KI          N  
Sbjct: 171 ELLLGATR-Y-GPEVDMWSVGCILAELFLGKPIFQGSTELEQL-EKIFELCGSPTDENWP 227

Query: 226 EFSCPFWF---------------------STGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
             S   WF                        A  L+ K+L  +PK RI  +   +H +F
Sbjct: 228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score =  151 bits (383), Expect = 8e-43
 Identities = 89/270 (32%), Positives = 149/270 (55%), Gaps = 23/270 (8%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           R IG G++AKV   + ++T    AMKV+ K  +     +D ++ E  +  +   HP +V 
Sbjct: 1   RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H +G+ +R
Sbjct: 61  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DLK +N+LLDS G++K++D+G+    ++G+    TT   CGTPNY+APE+L    Y G +
Sbjct: 121 DLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSTFCGTPNYIAPEILRGEDY-GFS 176

Query: 191 ADVWSCGVILFVLMAGYLPF---GETDLPT------LYKKINAAEFSCPFWFSTGATSLI 241
            D W+ GV++F +MAG  PF   G +D P       L++ I   +   P   S  A S++
Sbjct: 177 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVL 236

Query: 242 HKILDPNPKTRI------RIEGIRKHPWFR 265
              L+ +PK R+          I+ HP+FR
Sbjct: 237 KSFLNKDPKERLGCHPQTGFADIQGHPFFR 266

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  150 bits (381), Expect = 1e-42
 Identities = 83/260 (31%), Positives = 132/260 (50%), Gaps = 16/260 (6%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVR 73
           +G G F KV  A+ ++TGE  A+K L K  I+    V+ +  E  I +     RHP +V 
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           L     +   V  ++E+  GG+L   I H     E     Y   ++  + + H   + +R
Sbjct: 67  LFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DLK +NLLLD+ G +K++DFGL    ++G+     T   CGTP ++APEVL+   Y   A
Sbjct: 126 DLKLDNLLLDTEGFVKIADFGLC---KEGMGFGDRTSTFCGTPEFLAPEVLTETSY-TRA 181

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D W  GV+++ ++ G  PF   D   ++  I   E   P + S  A S++ ++L  NP+
Sbjct: 182 VDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPE 241

Query: 251 TRI-----RIEGIRKHPWFR 265
            R+       E ++K P+FR
Sbjct: 242 RRLGSGEKDAEDVKKQPFFR 261

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  149 bits (379), Expect = 2e-42
 Identities = 92/314 (29%), Positives = 143/314 (45%), Gaps = 66/314 (21%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK----REISIMKI 65
           +YE G+ +GEGT+A V  A+++ETG  VA+K + K    K    D I     REI +++ 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKI-KLGERKEAK-DGINFTALREIKLLQE 58

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTG---GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++HPNI+ L +V   ++ + ++ EF+       + DK +    L   D + Y    +  +
Sbjct: 59  LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSI---VLTPADIKSYMLMTLRGL 115

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-------- 174
            + HS  + HRDLKP NLL+ S G LK++DFGL+            + G+PN        
Sbjct: 116 EYLHSNWILHRDLKPNNLLIASDGVLKLADFGLA-----------RSFGSPNRKMTHQVV 164

Query: 175 ---YVAPEVLSNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYKKI------- 222
              Y APE+L    + G   D+WS G I   L+    +LP G++D+  L  KI       
Sbjct: 165 TRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLP-GDSDIDQL-GKIFEALGTP 222

Query: 223 ---NAAEFSC-------------PFW--FSTG---ATSLIHKILDPNPKTRIRIEGIRKH 261
              N    +              P    F      A  L+ ++L  NP  RI      +H
Sbjct: 223 TEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282

Query: 262 PWFRKNYNPVKCSE 275
           P+F  +  P   S+
Sbjct: 283 PYFSNDPAPTPPSQ 296

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  149 bits (377), Expect = 2e-42
 Identities = 91/274 (33%), Positives = 157/274 (57%), Gaps = 20/274 (7%)

Query: 11  YEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIV 66
           +E+ + +G G + KV   R     ++G+  AMKVL K+TI+ K +  +  + E  +++ +
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61

Query: 67  RH-PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           R  P +V LH    + TK+++IL+++ GGELF  +  + R  E + + Y  +++ A+ H 
Sbjct: 62  RQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHL 121

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNR 184
           H  G+ +RD+K EN+LLDS G++ ++DFGLS    +  VE  ++ CGT  Y+AP+++  R
Sbjct: 122 HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIV--R 179

Query: 185 GYDG---SAADVWSCGVILFVLMAGYLPFG----ETDLPTLYKKINAAEFSCPFWFSTGA 237
           G DG    A D WS GV+++ L+ G  PF     +     + ++I  +E   P   S  A
Sbjct: 180 GGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALA 239

Query: 238 TSLIHKILDPNPKTRI-----RIEGIRKHPWFRK 266
             +I ++L  +PK R+       + I+KHP+F+K
Sbjct: 240 KDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  149 bits (379), Expect = 3e-42
 Identities = 84/254 (33%), Positives = 139/254 (54%), Gaps = 5/254 (1%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVRHPNIV 72
           + +G+G+F KV  A+ + T E  A+K L K  +L+   V+   ++R +  +    HP + 
Sbjct: 1   KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-WEHPFLT 59

Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
            L     ++  ++ ++E++ GG+L   I   GR  E   R Y  ++I  +   H KG+ +
Sbjct: 60  HLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIY 119

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLK +N+LLD  G++K++DFG+      G     T CGTP+Y+APE+L  + Y+ S  D
Sbjct: 120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNES-VD 178

Query: 193 VWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTR 252
            WS GV+L+ ++ G  PF   D   L+  I       P W S  A   + K+ + +P  R
Sbjct: 179 WWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKR 238

Query: 253 IRIEG-IRKHPWFR 265
           + ++G IR+HP+FR
Sbjct: 239 LGVDGDIRQHPFFR 252

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score =  150 bits (380), Expect = 3e-42
 Identities = 86/269 (31%), Positives = 137/269 (50%), Gaps = 10/269 (3%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNR-ETGESVAMKVLAKSTILKHRMVDQIKREI 60
           +K   +   +   RT+G G+F +V  A  + E    VA+K   KS I+K + VD +  E 
Sbjct: 23  RKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSER 82

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I+  + HP  V L+      + +Y++LEFV GGE F  +    R   +    Y  Q++ 
Sbjct: 83  KILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVL 142

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
              +  S  + +RDLKPENLLLD  G +K++DFG + +        +T CGTP Y+APE+
Sbjct: 143 IFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT---YTLCGTPEYIAPEI 199

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           L N G+ G AAD W+ G+ ++ ++ G  PF   +   +Y+KI       P +       L
Sbjct: 200 LLNVGH-GKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHL 258

Query: 241 IHKILDPNPKTRI-----RIEGIRKHPWF 264
           + K+L  +   R        + +++HPWF
Sbjct: 259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287

Length = 340

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score =  147 bits (373), Expect = 2e-41
 Identities = 85/240 (35%), Positives = 130/240 (54%), Gaps = 2/240 (0%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHR 133
                +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K V +R
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK ENL+LD  G++K++DFGL     +    + T CGTP Y+APEVL +  Y G A D 
Sbjct: 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDW 179

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W  GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 180 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRL 239

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  144 bits (365), Expect = 6e-41
 Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 9/257 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++V + +G+G++  V   +     +  A+K +   ++ +    D +  EI I+  V HPN
Sbjct: 2   FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVN-EIRILASVNHPN 60

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLLEND-CRRYFQQLIDAVAHCH 126
           I+   E      K+ I++E+   G+L   I     + +L+      R F QL+  +   H
Sbjct: 61  IISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            + + HRDLK  N+LL +   +K+ D G+S + ++   +  T  GTP+Y+APEV   R Y
Sbjct: 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--MAKTQIGTPHYMAPEVWKGRPY 178

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKIL 245
               +D+WS G +L+ +     PF    +  L  K+   ++   P  +S    + I  +L
Sbjct: 179 S-YKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSML 237

Query: 246 DPNPKTRIRIEGIRKHP 262
              PK R   + I   P
Sbjct: 238 QVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  144 bits (365), Expect = 4e-40
 Identities = 81/255 (31%), Positives = 139/255 (54%), Gaps = 7/255 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN-IVRLH 75
           +G+G+F KV  A+ + T E  A+K+L K  I++   V+    E  ++ +   P  + +LH
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLH 67

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
               +  ++Y ++E+V GG+L   I   G+  E     Y  ++   +   HSKG+ +RDL
Sbjct: 68  SCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           K +N++LD+ G++K++DFG+      G +   T CGTP+Y+APE+++ + Y G + D W+
Sbjct: 128 KLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPY-GKSVDWWA 186

Query: 196 CGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI 255
            GV+L+ ++AG  PF   D   L++ I     S P   S  A S+   +L  +P  R+  
Sbjct: 187 FGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246

Query: 256 -----EGIRKHPWFR 265
                  IR+H +FR
Sbjct: 247 GPTGERDIREHAFFR 261

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score =  145 bits (366), Expect = 5e-40
 Identities = 95/309 (30%), Positives = 162/309 (52%), Gaps = 17/309 (5%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           ++K   +   Y+V + IG G F +V+  +++ + +  AMK+L+K  ++K         E 
Sbjct: 35  IRKLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEER 94

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            IM     P +V+L         +Y+++E++ GG+L + ++    + E   + Y  +++ 
Sbjct: 95  DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVL 153

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPE 179
           A+   HS G+ HRD+KP+N+LLD +G+LK++DFG    + + G+    T  GTP+Y++PE
Sbjct: 154 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPE 213

Query: 180 VLSNR---GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFW 232
           VL ++   GY G   D WS GV LF ++ G  PF    L   Y KI    N+  F     
Sbjct: 214 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVE 273

Query: 233 FSTGATSLIHKILDPNPKT--RIRIEGIRKHPWFRK---NYNPVKCSEE---EEVNLDDV 284
            S  A +LI   L        R  +E I++HP+F+    N++ ++ +      E++ D  
Sbjct: 274 ISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDID 333

Query: 285 HAVFDDIED 293
            + FDDIED
Sbjct: 334 SSNFDDIED 342

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score =  143 bits (362), Expect = 7e-40
 Identities = 84/255 (32%), Positives = 134/255 (52%), Gaps = 6/255 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           + IG+G+F KV  A+++   +  A+KVL K  ILK +    I  E +++ K V+HP +V 
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  K+Y +L+++ GGELF  +  +   LE   R Y  ++  A+ + HS  + +R
Sbjct: 61  LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLKPEN+LLDS G++ ++DFGL     +      T CGTP Y+APEVL  + YD    D 
Sbjct: 121 DLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYD-RTVDW 179

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W  G +L+ ++ G  PF   +   +Y  I           +  A  L+  +L  +   R+
Sbjct: 180 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL 239

Query: 254 RIEG----IRKHPWF 264
             +     I+ H +F
Sbjct: 240 GAKDDFMEIKNHIFF 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  144 bits (365), Expect = 9e-40
 Identities = 95/307 (30%), Positives = 151/307 (49%), Gaps = 25/307 (8%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +   ++V + IG G F +V+  +++ + +  AMK+L+K  ++K         E  IM   
Sbjct: 41  KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA 100

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
               IV+LH        +Y+++E++ GG+L + ++    + E   R Y  +++ A+   H
Sbjct: 101 NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLALDAIH 159

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           S G  HRD+KP+N+LLD  G+LK++DFG    +   G+    T  GTP+Y++PEVL ++G
Sbjct: 160 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQG 219

Query: 186 YD---GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFWFSTGAT 238
            D   G   D WS GV L+ ++ G  PF    L   Y KI    N+  F      S  A 
Sbjct: 220 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAK 279

Query: 239 SLIHKILDPNPKT--RIRIEGIRKHPWF----------RKNYNPVKCSEEEEVNLDDVHA 286
            LI   L        R  ++ I+ HP+F          R+   PV      E++ D   +
Sbjct: 280 DLICAFLTDREVRLGRNGVDEIKSHPFFKNDQWTFDNIRETVAPVV----PELSSDIDTS 335

Query: 287 VFDDIED 293
            FDDIED
Sbjct: 336 NFDDIED 342

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  141 bits (358), Expect = 1e-39
 Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 17/259 (6%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G+G F KV  AQ++ETG   A K+  +     L+  MV     EI I+   +HPNIV L
Sbjct: 13  LGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMV-----EIDILSECKHPNIVGL 67

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKGVYHR 133
           +E      K++I++EF  GG L   ++   R L     RY  +Q+++A+   HS  V HR
Sbjct: 68  YEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-----SNRGYDG 188
           DLK  N+LL   G++K++DFG+SA  +  ++   T  GTP ++APEV+      +  YD 
Sbjct: 128 DLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYD- 186

Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIHKIL 245
             AD+WS G+ L  L     P  E +   +  KI  +E      P  +S+     +   L
Sbjct: 187 YKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCL 246

Query: 246 DPNPKTRIRIEGIRKHPWF 264
             +P  R     + KHP+ 
Sbjct: 247 VKDPDDRPTAAELLKHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score =  142 bits (359), Expect = 2e-39
 Identities = 86/305 (28%), Positives = 163/305 (53%), Gaps = 6/305 (1%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVR 73
           + +G+G+F KV  A+ + T +  A+K L K  +L    V+    E  ++ +   HP +  
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           L+    ++  ++ ++E++ GG+L   I    +        Y  ++I  +   HSKG+ +R
Sbjct: 61  LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD+ G++K++DFG+      G     T CGTP+Y+APE+L  + Y  ++ D 
Sbjct: 121 DLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKY-NTSVDW 179

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           WS GV+L+ ++ G  PF   D   L++ I       P W +  A  ++ K+    P+ R+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRL 239

Query: 254 RIEG-IRKHPWFRK-NYNPVKCSEEEEVNLDDVHAVFD--DIEDQYVAEQSENKVGGPLL 309
            ++G IR+HP+FR+ +++ ++  E E      V +  D  + + +++ E+    V   +L
Sbjct: 240 GVKGDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEFLNEKPRLSVTDRML 299

Query: 310 MNAFE 314
           +N+ +
Sbjct: 300 INSMD 304

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  140 bits (356), Expect = 3e-39
 Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 7/215 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KYEV   +GEG +  V   +N+ TGE VA+K   +S   +        RE+ +++ +RH 
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVK-KTALREVKVLRQLRHE 60

Query: 70  NIVRLHEVLASRTKVYIILEFV--TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIV L E    + ++Y++ E+V  T  EL +     G L  +  R Y  QL+ A+A+CHS
Sbjct: 61  NIVNLKEAFRRKGRLYLVFEYVERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHS 118

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
             + HRD+KPEN+L+   G LK+ DFG + AL  +    L     T  Y APE+L     
Sbjct: 119 HNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTN 178

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK 220
            G   DVW+ G I+  L+ G   F G++D+  LY 
Sbjct: 179 YGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL 213

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score =  141 bits (357), Expect = 5e-39
 Identities = 82/265 (30%), Positives = 144/265 (54%), Gaps = 15/265 (5%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           R IG G++AKV   + ++  +  AMKV+ K  +     +D ++ E  +  +   +P +V 
Sbjct: 1   RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    + +++++++E+V GG+L   +  Q +L E   R Y  ++  A+   H +G+ +R
Sbjct: 61  LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD+ G++K++D+G+        +   T CGTPNY+APE+L    Y G + D 
Sbjct: 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEY-GFSVDW 179

Query: 194 WSCGVILFVLMAGYLPFG-ETDLPT------LYKKINAAEFSCPFWFSTGATSLIHKILD 246
           W+ GV++F +MAG  PF   TD P       L++ I       P + S  A+ ++   L+
Sbjct: 180 WALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLN 239

Query: 247 PNPKTRIRIE------GIRKHPWFR 265
            +PK R+  +       I+ H +FR
Sbjct: 240 KDPKERLGCQPQTGFSDIKSHTFFR 264

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  140 bits (354), Expect = 6e-39
 Identities = 91/287 (31%), Positives = 133/287 (46%), Gaps = 49/287 (17%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVL-------AKSTILKHRMVDQIKREISIMKIVRHP 69
           +GEGT+A V   +NR TGE VA+K +         ST +         REIS+MK ++H 
Sbjct: 8   LGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAI---------REISLMKELKHE 58

Query: 70  NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIVRLH+V+ +  K+ ++ E++     +  D    +G L  N  + +  QL+  +A CH 
Sbjct: 59  NIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE 118

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-SNRGY 186
             V HRDLKP+NLL++  G LK++DFGL+      V        T  Y AP+VL  +R Y
Sbjct: 119 NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTY 178

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----------------NAAEFSCP 230
             S  D+WS G I+  ++ G   F  T+      KI                   E+   
Sbjct: 179 STS-IDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT 237

Query: 231 F-------------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
           F                     L+H++L  NP+ RI      +HPWF
Sbjct: 238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  139 bits (352), Expect = 6e-39
 Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 9/259 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKIVR 67
           ++  G  +G G+F  V    N + G+  A+K   LA         V Q+++EI+++  ++
Sbjct: 1   RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ 60

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+          +YI LE V GG L   +   G   E   R Y +Q++  + + H 
Sbjct: 61  HPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC--GTPNYVAPEVLSNRG 185
           +   HRD+K  N+L+D+ G +K++DFG++   +Q VE        G+P ++APEV++ +G
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLADFGMA---KQVVEFSFAKSFKGSPYWMAPEVIAQQG 177

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEF-SCPFWFSTGATSLIHK 243
             G AAD+WS G  +  +  G  P+ +   +  ++K   + E    P   S  A   I K
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILK 237

Query: 244 ILDPNPKTRIRIEGIRKHP 262
            L  +P  R     + +HP
Sbjct: 238 CLQRDPSLRPTAAELLEHP 256

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  139 bits (353), Expect = 8e-39
 Identities = 81/274 (29%), Positives = 139/274 (50%), Gaps = 18/274 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y+    IGEG   +V  A +R TG+ VA+K +    + K    + I  EI IMK  +HP
Sbjct: 20  LYKNLEKIGEGASGEVYKATDRATGKEVAIKKM---RLRKQNK-ELIINEILIMKDCKHP 75

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           NIV  ++      ++++++E++ GG L D I  +  R+ E       ++++  + + HS+
Sbjct: 76  NIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ 135

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V HRD+K +N+LL   G++K++DFG +A   +     ++  GTP ++APEV+  + Y  
Sbjct: 136 NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYG- 194

Query: 189 SAADVWSCGVILFVLMAGYLP-FGETDLPTLY----KKINAAEFSCPFWFSTGATSLIHK 243
              D+WS G++   +  G  P   E  L  L+    K I       P  +S      ++K
Sbjct: 195 PKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI--PPLKNPEKWSPEFKDFLNK 252

Query: 244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
            L  +P+ R   E + +HP+ +K      C +EE
Sbjct: 253 CLVKDPEKRPSAEELLQHPFLKK-----ACPKEE 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score =  138 bits (349), Expect = 1e-38
 Identities = 72/256 (28%), Positives = 137/256 (53%), Gaps = 5/256 (1%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY   + IGEG+F K    +++E G+   +K +  S  +  +  ++ ++E++++  ++HP
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISK-MSPKEREESRKEVAVLSNMKHP 59

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDAVAHCHS 127
           NIV+  E       +YI++++  GG+L+ KI  Q  +L  E+    +F Q+  A+ H H 
Sbjct: 60  NIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHD 119

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + + HRD+K +N+ L   G +K+ DFG++ +    VEL  T  GTP Y++PE+  NR Y+
Sbjct: 120 RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYN 179

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKILD 246
            + +D+W+ G +L+ +      F   ++  L  KI    +      +S    +L+ ++  
Sbjct: 180 -NKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFK 238

Query: 247 PNPKTRIRIEGIRKHP 262
            NP+ R  +  I +  
Sbjct: 239 RNPRDRPSVNSILEKN 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score =  138 bits (350), Expect = 4e-38
 Identities = 78/253 (30%), Positives = 136/253 (53%), Gaps = 3/253 (1%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVR 73
           + +G+G+F KV  A+ +  GE  A+K L K  +L    V+    E  ++ +   +P +  
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           L+    ++  ++ ++EF+ GG+L   I  +GR        Y  +++  +   HSKG+ +R
Sbjct: 61  LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N++LD  G++K++DFG+      G     T CGTP+Y+APE+L    Y  S  D 
Sbjct: 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFS-VDW 179

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           WS GV+L+ ++ G  PF   D   L++ I       P W +  +  ++ K+ + +P  R+
Sbjct: 180 WSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRL 239

Query: 254 RIEG-IRKHPWFR 265
            + G IR HP+F+
Sbjct: 240 GVVGNIRGHPFFK 252

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  137 bits (348), Expect = 5e-38
 Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 21/201 (10%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-REI-SIMKIVRH 68
           Y+V + +G+GTF  V  A+N+ETGE VA+K + K     +   + +  RE+ S+ K+  H
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKF---YSWEECMNLREVKSLRKLNEH 57

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLL-ENDCRRYFQQLIDAVAHCH 126
           PNIV+L EV     ++Y + E++ G  L+  +   +G+   E+  R    Q++  +AH H
Sbjct: 58  PNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH 116

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGL-----SALPQQGVELLHTT-CGTPNYVAPEV 180
             G +HRDLKPENLL+     +K++DFGL     S  P       +T    T  Y APE+
Sbjct: 117 KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-------YTDYVSTRWYRAPEI 169

Query: 181 LSNRGYDGSAADVWSCGVILF 201
           L       S  D+W+ G I+ 
Sbjct: 170 LLRSTSYSSPVDIWALGCIMA 190

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  137 bits (346), Expect = 5e-38
 Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 10/259 (3%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH--RMVDQIKREISIMKIVRHPNI 71
           G+ +G+G F +V    + +TG  +A+K +          + V+ ++ EI ++K ++H  I
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI 66

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           V+ +  L     + I +E++ GG + D++   G L E   R+Y +Q+++ V + HS  + 
Sbjct: 67  VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIV 126

Query: 132 HRDLKPENLLLDSYGNLKVSDFG----LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           HRD+K  N+L DS GN+K+ DFG    L  +   G  +   T GTP +++PEV+S  GY 
Sbjct: 127 HRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVT-GTPYWMSPEVISGEGY- 184

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI--NAAEFSCPFWFSTGATSLIHKIL 245
           G  ADVWS G  +  ++    P+ E +      KI         P   S  A + + +  
Sbjct: 185 GRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTF 244

Query: 246 DPNPKTRIRIEGIRKHPWF 264
             N K R   E + +H + 
Sbjct: 245 VENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score =  136 bits (345), Expect = 7e-38
 Identities = 81/262 (30%), Positives = 133/262 (50%), Gaps = 21/262 (8%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR-----EISIMKI 65
           +++ + IG+G F+ V  A     G  VA+K   K  I +  M+D   R     EI ++K 
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALK---KVQIFE--MMDAKARQDCLKEIDLLKQ 58

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLL-ENDCRRYFQQLIDA 121
           + HPN+++         ++ I+LE    G+L   I H   Q RL+ E    +YF QL  A
Sbjct: 59  LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSA 118

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + H HSK + HRD+KP N+ + + G +K+ D GL           H+  GTP Y++PE +
Sbjct: 119 LEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 178

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKINAAEFSCPF---WFSTG 236
              GY+   +D+WS G +L+ + A   PF   + +L +L KKI   ++  P     +S  
Sbjct: 179 HENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP-PLPADHYSEE 236

Query: 237 ATSLIHKILDPNPKTRIRIEGI 258
              L+ + ++P+P+ R  I  +
Sbjct: 237 LRDLVSRCINPDPEKRPDISYV 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  137 bits (346), Expect = 1e-37
 Identities = 81/218 (37%), Positives = 118/218 (54%), Gaps = 27/218 (12%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------REISIMKIVRHP 69
           IGEGT+  V  A+++ TGE VA+K        K R+  + +       REIS++K + HP
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALK--------KIRLETEDEGVPSTAIREISLLKELNHP 58

Query: 70  NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIVRL +V+ S  K+Y++ EF+     +  D     G L     + Y  QL+  +A+CHS
Sbjct: 59  NIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTG-LDPPLIKSYLYQLLQGIAYCHS 117

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTT--CGTPNYVAPEVLSNR 184
             V HRDLKP+NLL+D  G LK++DFGL+ A    GV +   T    T  Y APE+L   
Sbjct: 118 HRVLHRDLKPQNLLIDREGALKLADFGLARAF---GVPVRTYTHEVVTLWYRAPEILLGS 174

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYK 220
               +  D+WS G I F  M    P   G++++  L++
Sbjct: 175 RQYSTPVDIWSIGCI-FAEMVNRRPLFPGDSEIDQLFR 211

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score =  137 bits (347), Expect = 1e-37
 Identities = 79/255 (30%), Positives = 141/255 (55%), Gaps = 7/255 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLH 75
           +G+G+F KV  A+ + T E  A+K+L K  +++   V+    E  ++ +  + P + +LH
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLH 67

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
               +  ++Y ++E+V GG+L  +I   GR  E     Y  ++   +   HSKG+ +RDL
Sbjct: 68  SCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDL 127

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           K +N++LDS G++K++DFG+            T CGTP+Y+APE+++ + Y G + D W+
Sbjct: 128 KLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWA 186

Query: 196 CGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI 255
            GV+L+ ++AG  PF   D   L++ I     + P   S  A ++   ++  +P  R+  
Sbjct: 187 FGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246

Query: 256 --EG---IRKHPWFR 265
             EG   I++H +FR
Sbjct: 247 GPEGERDIKEHAFFR 261

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score =  138 bits (348), Expect = 2e-37
 Identities = 92/296 (31%), Positives = 144/296 (48%), Gaps = 44/296 (14%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E  + IG G F +VR  Q ++TG   AMK+L K+ +L+   V  I+ E  I+       
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V++      +  +Y+I+EF+ GG++   ++ +  L E   + Y  + + A+   H  G 
Sbjct: 63  VVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGF 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGL---------------------SALPQQGV------ 163
            HRD+KP+NLLLD+ G++K+SDFGL                     S    Q +      
Sbjct: 123 IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKA 182

Query: 164 --------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETD 214
                   +L ++T GTP+Y+APEV    GY+    D WS GVI++ ++ GY PF  ET 
Sbjct: 183 ETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSETP 241

Query: 215 LPTLYKKINAAE---FSCPFWFSTGATSLIHKILDPNPKTRI---RIEGIRKHPWF 264
             T  K +N  E   F      S  A  LI +    + + RI    +E I+ HP+F
Sbjct: 242 QETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  136 bits (344), Expect = 3e-37
 Identities = 79/256 (30%), Positives = 140/256 (54%), Gaps = 7/256 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLH 75
           +G+G+F KV  A+ + T E  A+K+L K  +++   V+    E  ++ +  + P + +LH
Sbjct: 8   LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
               +  ++Y ++E+V GG+L   I   G+  E     Y  ++   +   H +G+ +RDL
Sbjct: 68  SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDL 127

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           K +N++LDS G++K++DFG+            T CGTP+Y+APE+++ + Y G + D W+
Sbjct: 128 KLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPY-GKSVDWWA 186

Query: 196 CGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI 255
            GV+L+ ++AG  PF   D   L++ I     S P   S  A S+   ++  +P  R+  
Sbjct: 187 YGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246

Query: 256 --EG---IRKHPWFRK 266
             EG   IR+H +FR+
Sbjct: 247 GPEGERDIREHAFFRR 262

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score =  137 bits (345), Expect = 6e-37
 Identities = 93/310 (30%), Positives = 155/310 (50%), Gaps = 17/310 (5%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +   YEV + IG G F +V+  +++ T +  AMK+L+K  ++K         E  IM   
Sbjct: 41  KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 100

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             P +V+L         +Y+++E++ GG+L + ++    + E   R Y  +++ A+   H
Sbjct: 101 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIH 159

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNR- 184
           S G  HRD+KP+N+LLD  G+LK++DFG    + ++G+    T  GTP+Y++PEVL ++ 
Sbjct: 160 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 219

Query: 185 --GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFWFSTGAT 238
             GY G   D WS GV L+ ++ G  PF    L   Y KI    N+  F      S  A 
Sbjct: 220 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 279

Query: 239 SLIHKILDPNPKT--RIRIEGIRKHPWFR------KNYNPVKCSEEEEVNLDDVHAVFDD 290
           +LI   L        R  +E I++H +F+      +           +++ D   + FDD
Sbjct: 280 NLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDD 339

Query: 291 IEDQYVAEQS 300
           IE+    E++
Sbjct: 340 IEEDKGEEET 349

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score =  133 bits (335), Expect = 1e-36
 Identities = 82/248 (33%), Positives = 127/248 (51%), Gaps = 10/248 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKIVR 67
           +Y V R +GEG+F +    Q+  + +  AMK   L KS+      V+  ++E  ++  ++
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS----SAVEDSRKEAVLLAKMK 56

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLL-ENDCRRYFQQLIDAVAHC 125
           HPNIV   E   +   +YI++E+  GG+L  KI  Q G+L  E+   ++F Q+   V H 
Sbjct: 57  HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI 116

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H K V HRD+K +N+ L   G +K+ DFG + L         T  GTP YV PE+  N  
Sbjct: 117 HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMP 176

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKI 244
           Y+ + +D+WS G IL+ L     PF       L  K+    +   P  +S    SLI ++
Sbjct: 177 YN-NKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQM 235

Query: 245 LDPNPKTR 252
              NP++R
Sbjct: 236 FKRNPRSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  134 bits (339), Expect = 1e-36
 Identities = 81/280 (28%), Positives = 143/280 (51%), Gaps = 30/280 (10%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E  + I  G +  V   +++ET +  AMK + K  ++    + Q+  E  I+    +P 
Sbjct: 3   FETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPF 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V +     ++  + +++E+V GG+    + + G L  +  R YF + + A+ + H+ G+
Sbjct: 63  VVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGI 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT------------------TCGT 172
            HRDLKP+NLL+ S G++K++DFGLS +   G+  L T                   CGT
Sbjct: 123 VHRDLKPDNLLITSMGHIKLTDFGLSKI---GLMSLTTNLYEGHIEKDTREFLDKQVCGT 179

Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF 231
           P Y+APEV+  +GY G   D W+ G+IL+  + G +PF G+T    L+ ++ + +   P 
Sbjct: 180 PEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISDDIEWPE 237

Query: 232 W---FSTGATSLIHKILDPNPKTRIRIEG---IRKHPWFR 265
                   A  LI ++L  NP  R+   G   +++H +F 
Sbjct: 238 GDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFL 277

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score =  135 bits (340), Expect = 3e-36
 Identities = 78/247 (31%), Positives = 123/247 (49%), Gaps = 36/247 (14%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E  + IG G F +VR  Q ++TG   AMK+L K+ +L+   V  I+ E  I+       
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V++      +  +Y+I+EF+ GG++   ++ +  L E + + Y  + + A+   H  G 
Sbjct: 63  VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLS-----------------ALPQQGV---------- 163
            HRD+KP+NLLLDS G++K+SDFGL                  +LP              
Sbjct: 123 IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKA 182

Query: 164 --------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL 215
                   +L  +T GTP+Y+APEV    GY+    D WS GVI++ ++ GY PF     
Sbjct: 183 ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSETP 241

Query: 216 PTLYKKI 222
              YKK+
Sbjct: 242 QETYKKV 248

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  135 bits (341), Expect = 3e-36
 Identities = 87/305 (28%), Positives = 139/305 (45%), Gaps = 56/305 (18%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG+G F +VR  Q ++TG+  AMK L KS + K   +  +K E  ++     P +V L
Sbjct: 7   KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSL 66

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           +        +Y+I+EF+ GG+L   ++      E+  R Y  + + A+   H  G  HRD
Sbjct: 67  YYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRD 126

Query: 135 LKPENLLLDSYGNLKVSDFGLS------------------------ALPQQGVE------ 164
           +KP+N+L+D  G++K+SDFGLS                           +  V       
Sbjct: 127 IKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINL 186

Query: 165 -----------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY 207
                            + ++T GTP+Y+APE+   +GY G   D WS G I+F  + G+
Sbjct: 187 TMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGY-GQECDWWSLGAIMFECLIGW 245

Query: 208 LPFGETDLPTLYKKINAAEFSCPF----WFSTGATSLIHKILDPNPKTRIRIEG---IRK 260
            PF   +    Y+KI     +  F      S  A  LI +++  N + R+   G   I+ 
Sbjct: 246 PPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304

Query: 261 HPWFR 265
           HP+FR
Sbjct: 305 HPFFR 309

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  134 bits (340), Expect = 4e-36
 Identities = 84/305 (27%), Positives = 133/305 (43%), Gaps = 52/305 (17%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +   +TIG G F +V   +  +T    AMK L K+ +L       +K E  I+    +  
Sbjct: 3   FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V+L+     +  +Y +++++ GG++   ++  G   E+  R Y  +L  A+   H  G 
Sbjct: 63  VVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGF 122

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLS---------------------------------- 156
            HRD+KP+N+L+D  G++K++DFGL                                   
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182

Query: 157 ---------ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY 207
                       Q    L H+  GTPNY+APEVL   GY     D WS GVIL+ ++ G 
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVGVILYEMLVGQ 241

Query: 208 LPF-GETDLPTLYKKIN-AAEFSCPFW--FSTGATSLIHKILDPNPKTRI---RIEGIRK 260
            PF  +T   T  K IN       P     S  A+ LI + L    + R+     + I+ 
Sbjct: 242 PPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCCGAEDRLGKNGADEIKA 300

Query: 261 HPWFR 265
           HP+F+
Sbjct: 301 HPFFK 305

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score =  131 bits (331), Expect = 5e-36
 Identities = 81/260 (31%), Positives = 136/260 (52%), Gaps = 8/260 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+ + IGEG+F K+  A+ +   E   +K +   T +  +  +  K+E+ ++  ++HP
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEI-DLTKMPVKEKEASKKEVILLAKMKHP 59

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLEND-CRRYFQQLIDAVAHCHS 127
           NIV          +++I++E+  GG+L  +I  Q G L   D    +F Q+   + H H 
Sbjct: 60  NIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHD 119

Query: 128 KGVYHRDLKPENLLLDSYGNL-KVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + + HRD+K +N+ L   G + K+ DFG++      +EL +T  GTP Y++PE+  NR Y
Sbjct: 120 RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPY 179

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW--FSTGATSLIHKI 244
           + +  D+WS G +L+ L     PF   +L  L  KI    F+ P    FS    SLI ++
Sbjct: 180 N-NKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA-PISPNFSRDLRSLISQL 237

Query: 245 LDPNPKTRIRIEGIRKHPWF 264
              +P+ R  I  I K P+ 
Sbjct: 238 FKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  131 bits (332), Expect = 2e-35
 Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 38/288 (13%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+G   +V   + + TG+  A+KVL K  ++K   V ++  E  I+  + HP +  L
Sbjct: 7   KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTL 66

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           +    + T + +++++  GGELF  +  Q    L E   R Y  +++ A+ + H  G+ +
Sbjct: 67  YASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVY 126

Query: 133 RDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGV----------ELLHTT------ 169
           RDLKPEN+LL   G++ +SDF LS           + +           +   T      
Sbjct: 127 RDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPS 186

Query: 170 ------CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN 223
                  GT  Y+APEV+S  G+ GSA D W+ G++L+ ++ G  PF  ++    +  I 
Sbjct: 187 FRSNSFVGTEEYIAPEVISGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNIL 245

Query: 224 AAEFSCP--FWFSTGATSLIHKILDPNPKTRI----RIEGIRKHPWFR 265
             E + P     S+ A  LI K+L  +P  R+        I++HP+FR
Sbjct: 246 KKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  130 bits (329), Expect = 2e-35
 Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 13/261 (4%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V   Q + TG+  A K L K  + K +       E  I++ V    IV L  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
              ++  + +++  + GG+L   I + G     E     Y  Q+I  + H H + + +RD
Sbjct: 61  AFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKPEN+LLD +GN+++SD GL A+  +G + +    GTP Y+APEVL    YD  + D +
Sbjct: 121 LKPENVLLDDHGNVRISDLGL-AVELKGGKKIKGRAGTPGYMAPEVLQGEVYD-FSVDWF 178

Query: 195 SCGVILFVLMAGYLPFGE----TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
           + G  L+ ++AG  PF +     +   L ++        P  FS  A  L   +L  +P+
Sbjct: 179 ALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPE 238

Query: 251 TRI-----RIEGIRKHPWFRK 266
            R+       + +R+HP F+ 
Sbjct: 239 KRLGCRGGSADEVREHPLFKD 259

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  128 bits (324), Expect = 8e-35
 Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 18/198 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            YE+ + IG GT+  V  A++  TGE VA+KV+    +      + I++EIS++K  RHP
Sbjct: 4   DYELIQRIGSGTYGDVYKARDIATGELVAIKVIK---LEPGDDFEIIQQEISMLKECRHP 60

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRL-LEND-----CRRYFQQLIDAVA 123
           NIV        R K++I++E+  GG L D I    R  L        CR   + L    A
Sbjct: 61  NIVAYFGSYLRRDKLWIVMEYCGGGSLQD-IYQVTRGPLSELQIAYVCRETLKGL----A 115

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           + H  G  HRD+K  N+LL   G++K++DFG+SA     +    +  GTP ++APEV + 
Sbjct: 116 YLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAV 175

Query: 184 R---GYDGSAADVWSCGV 198
               GYDG   D+W+ G+
Sbjct: 176 ERKGGYDG-KCDIWALGI 192

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  128 bits (325), Expect = 9e-35
 Identities = 81/278 (29%), Positives = 130/278 (46%), Gaps = 62/278 (22%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVR- 67
           Y++   IGEGTF++V  AQ+R+TG+  A+K + K      + ++Q+   REI  ++ +  
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKK----HFKSLEQVNNLREIQALRRLSP 56

Query: 68  HPNIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQGR---LLENDCRRYFQQLIDAV 122
           HPNI+RL EVL  R   ++ ++ E +    L++ I  +GR   L E   + Y  QL+ ++
Sbjct: 57  HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELI--KGRKRPLPEKRVKSYMYQLLKSL 113

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV------ 176
            H H  G++HRD+KPEN+L+     LK++DFG S                P Y       
Sbjct: 114 DHMHRNGIFHRDIKPENILIKDD-ILKLADFG-SC---------RGIYSKPPYTEYISTR 162

Query: 177 ---APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFW 232
              APE L   GY G   D+W+ G + F +++ +  F G  +L  + K            
Sbjct: 163 WYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAK------------ 210

Query: 233 FSTGATSLIHKIL-DPNPKTRIRIEGIRKHPWFRKNYN 269
                   IH +L  P+ +        +       NYN
Sbjct: 211 --------IHDVLGTPDAEV-----LKKFRKSRHMNYN 235

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  129 bits (325), Expect = 1e-34
 Identities = 94/296 (31%), Positives = 132/296 (44%), Gaps = 53/296 (17%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------REISI 62
           KYE    IGEGT+  V  A+NRET E VA+K        + R+ D  +       REI +
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALK--------RVRLDDDDEGVPSSALREICL 52

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLID 120
           +K ++H NIVRL++VL S  K+ ++ E+      + FD     G +     + +  QL+ 
Sbjct: 53  LKELKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLK 110

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
            +A CHS  V HRDLKP+NLL++  G LK++DFGL+      V        T  Y  P+V
Sbjct: 111 GLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV 170

Query: 181 L-SNRGYDGSAADVWSCGVILFVLMAGYLPF--------------------------GET 213
           L   + Y  S  D+WS G I   L     P                           G +
Sbjct: 171 LFGAKLYSTS-IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVS 229

Query: 214 DLPT-----LYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            LP      +Y    +     P   STG   L+  +L  NP  RI  E   +HP+F
Sbjct: 230 KLPDYKPYPMYPATTSLVNVVPKLNSTG-RDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  128 bits (323), Expect = 2e-34
 Identities = 72/189 (38%), Positives = 105/189 (55%), Gaps = 3/189 (1%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 8   IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 66

Query: 77  VLASRTKVYIILEFVTGG-ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
           V+ +  K+Y++ EF+    + F        +     + Y  QL+  +A CHS  V HRDL
Sbjct: 67  VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 126

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           KP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+WS
Sbjct: 127 KPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWS 186

Query: 196 CGVILFVLM 204
            G I F  M
Sbjct: 187 LGCI-FAEM 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  126 bits (319), Expect = 5e-34
 Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 11/219 (5%)

Query: 12  EVGRTIGEGTFAKVR----FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           E+G+ +GEG F +V           T   VA+K L +         ++   E SIMK + 
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGA--SEEEREEFLEEASIMKKLS 59

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCH 126
           HPNIVRL  V      +YI+ E++ GG+L D +  H  +L   D  +   Q+   + +  
Sbjct: 60  HPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLE 119

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
           SK   HRDL   N L+     +K+SDFGLS  + +            P  ++APE L + 
Sbjct: 120 SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDG 179

Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
            +  S +DVWS GV+L+ +   G  P+       + + +
Sbjct: 180 KFT-SKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELL 217

Length = 258

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  126 bits (319), Expect = 7e-34
 Identities = 80/258 (31%), Positives = 133/258 (51%), Gaps = 10/258 (3%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A ++ TG  VA+K   K  + K +  + +  E+ IM+  +HPNIV ++ 
Sbjct: 27  IGEGSTGIVCIATDKSTGRQVAVK---KMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYS 83

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D IV   R+ E         ++ A++  H++GV HRD+K
Sbjct: 84  SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIK 142

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL S G +K+SDFG  A   + V    +  GTP ++APEV+S   Y G+  D+WS 
Sbjct: 143 SDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPY-GTEVDIWSL 201

Query: 197 GVILFVLMAGYLP-FGETDLPTLYKKINAAE---FSCPFWFSTGATSLIHKILDPNPKTR 252
           G+++  ++ G  P F E  L  + K+I              S    S + ++L  +P  R
Sbjct: 202 GIMVIEMVDGEPPYFNEPPLQAM-KRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQR 260

Query: 253 IRIEGIRKHPWFRKNYNP 270
                +  HP+  K   P
Sbjct: 261 ATAAELLNHPFLAKAGPP 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score =  125 bits (315), Expect = 2e-33
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 12/209 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHR-----MVDQIKREISIMKIV 66
           G  IG+GT+ +V  A N  TGE +A+K   L  +   +H      MV  ++ EI  +K +
Sbjct: 6   GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            H NIV+      +   + I LE+V GG +   +   GR  E   R + +Q+++ +A+ H
Sbjct: 66  DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLH 125

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC--GTPNYVAPEVLSN- 183
           SKG+ HRDLK +NLL+D+ G  K+SDFG+S       +        G+  ++APEV+ + 
Sbjct: 126 SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSY 185

Query: 184 -RGYDGSAADVWSCGVILFVLMAGYLPFG 211
            +GY     D+WS G ++  + AG  P+ 
Sbjct: 186 SQGYSAK-VDIWSLGCVVLEMFAGRRPWS 213

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score =  124 bits (313), Expect = 2e-33
 Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 9/257 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   R +G+G F +    +  E    V  K +  +  L  +       EI I+ +++HPN
Sbjct: 2   YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR-LSEKERRDALNEIVILSLLQHPN 60

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDAVAHCHSK 128
           I+  +        + I +E+  GG L+DKIV Q   L  E     Y  Q++ AV++ H  
Sbjct: 61  IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH--TTCGTPNYVAPEVLSNRGY 186
           G+ HRD+K  N+ L   G +K+ DFG+S     G E     T  GTP Y++PE+     Y
Sbjct: 121 GILHRDIKTLNIFLTKAGLIKLGDFGISK--ILGSEYSMAETVVGTPYYMSPELCQGVKY 178

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKIL 245
           +   +D+W+ G +L+ L+     F  T+   L  KI    ++     +S+   SL+H +L
Sbjct: 179 N-FKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLL 237

Query: 246 DPNPKTRIRIEGIRKHP 262
             +P+ R   + +   P
Sbjct: 238 QQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score =  126 bits (319), Expect = 2e-33
 Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 16/207 (7%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVL---AKSTILKHRMVDQIKREISIMKIVRH 68
           E    IG G    V    +R TG   A+KV+    + T+ +     QI REI I++ V H
Sbjct: 77  ERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRR-----QICREIEILRDVNH 131

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PN+V+ H++     ++ ++LEF+ GG L    +   + L +  R    Q++  +A+ H +
Sbjct: 132 PNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQFLADVAR----QILSGIAYLHRR 187

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS---NRG 185
            + HRD+KP NLL++S  N+K++DFG+S +  Q ++  +++ GT  Y++PE ++   N G
Sbjct: 188 HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHG 247

Query: 186 -YDGSAADVWSCGVILFVLMAGYLPFG 211
            YDG A D+WS GV +     G  PFG
Sbjct: 248 AYDGYAGDIWSLGVSILEFYLGRFPFG 274

Length = 353

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  125 bits (316), Expect = 2e-33
 Identities = 90/310 (29%), Positives = 139/310 (44%), Gaps = 69/310 (22%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------- 57
           R V +YE    I EGT+  V  A++++TGE VA+K              ++K        
Sbjct: 2   RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALK--------------KLKMEKEKEGF 47

Query: 58  -----REISIMKIVRHPNIVRLHEVLASRT--KVYIILEFVTGGELFDKI-VHQGRLLEN 109
                REI+I+  ++HPNIV + EV+      K+Y+++E+V   +L   +   +   L++
Sbjct: 48  PITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQS 106

Query: 110 DCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT 169
           + +    QL+  VAH H   + HRDLK  NLLL++ G LK+ DFGL+   + G  L   T
Sbjct: 107 EVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAR--EYGSPLKPYT 164

Query: 170 CG--TPNYVAPEVLSNRGYDGSAADVWSCGVIL--FVLMAGYLPFGETDLPTLYK----- 220
               T  Y APE+L       +A D+WS G I    +      P G++++  L K     
Sbjct: 165 QLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP-GKSEIDQLNKIFKLL 223

Query: 221 -----KINAAEFSCPFW----------------FSTGATS-----LIHKILDPNPKTRIR 254
                KI       P                  F   + S     L++++L  +P  RI 
Sbjct: 224 GTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS 283

Query: 255 IEGIRKHPWF 264
            E   KHP+F
Sbjct: 284 AEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  124 bits (312), Expect = 4e-33
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 5/245 (2%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   IG+G+F  V     +      AMK +  S  +  R  ++   E  ++  +    
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK-MNRREREEAIDEARVLAKLDSSY 60

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSK 128
           I+R +E    + K+ I++E+   G+L   +  Q    L E+   R+F Q++  +AH HSK
Sbjct: 61  IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            + HRD+K  NL LD+Y N+K+ D G++ L        +T  GTP Y++PE+  ++ Y+ 
Sbjct: 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYN- 179

Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKILDP 247
             +DVW+ GV+L+    G  PF   +   L  KI    F      +S     LI + L  
Sbjct: 180 EKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239

Query: 248 NPKTR 252
           + + R
Sbjct: 240 DYRQR 244

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  123 bits (312), Expect = 4e-33
 Identities = 61/229 (26%), Positives = 104/229 (45%), Gaps = 15/229 (6%)

Query: 14  GRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           G+ +GEG F +V   +      +    VA+K L +    +     +  RE  IM+ + HP
Sbjct: 4   GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIE--EFLREARIMRKLDHP 61

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSK 128
           N+V+L  V      +YI++E++ GG+L   +  ++ +L  +D   +  Q+   + +  SK
Sbjct: 62  NVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESK 121

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYD 187
              HRDL   N L+     +K+SDFGLS                P  ++APE L    + 
Sbjct: 122 NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKF- 180

Query: 188 GSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAEF-----SCP 230
            S +DVWS GV+L+ +   G  P+       + + +          +CP
Sbjct: 181 TSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCP 229

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score =  127 bits (319), Expect = 4e-33
 Identities = 91/305 (29%), Positives = 136/305 (44%), Gaps = 56/305 (18%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +T+G G F +V  A+  +T    AMK L K  +L    V  +K E  I+    +  +VRL
Sbjct: 7   KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRL 66

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           +     +  +Y +++++ GG++   ++  G   E+  R Y  +L  AV   H  G  HRD
Sbjct: 67  YYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRD 126

Query: 135 LKPENLLLDSYGNLKVSDFGL--------------------------------------- 155
           +KP+N+L+D  G++K++DFGL                                       
Sbjct: 127 IKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCG 186

Query: 156 --------SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY 207
                    A  Q    L H+  GTPNY+APEVL   GY     D WS GVIL+ ++ G 
Sbjct: 187 DRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGQ 245

Query: 208 LPF-GETDLPTLYKKIN-AAEFSCPFW--FSTGATSLIHKILDPNPKTRIRIEG---IRK 260
            PF  +T L T  K IN       P     S  A+ LI K+    P+ R+   G   I+ 
Sbjct: 246 PPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR-GPEDRLGKNGADEIKA 304

Query: 261 HPWFR 265
           HP+F+
Sbjct: 305 HPFFK 309

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =  123 bits (311), Expect = 5e-33
 Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 17/262 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ----IKREISIMKI 65
           KYE  R +G G F  V   + +   + V +K      I   +M        + E  ++K+
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIK-----QIPVEQMTKDERLAAQNECQVLKL 55

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDAVA 123
           + HPNI+  +E       + I++E+  GG L + I  +   L  E+    +F Q++ A+ 
Sbjct: 56  LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH 115

Query: 124 HCHSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           H H+K + HRDLK +N+LLD +   +K+ DFG+S +     +  +T  GTP Y++PE+  
Sbjct: 116 HVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK-AYTVVGTPCYISPELCE 174

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF--WFSTGATSL 240
            + Y+   +D+W+ G +L+ L +    F   +LP L  KI +  F+ P    +S     L
Sbjct: 175 GKPYN-QKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA-PISDRYSPDLRQL 232

Query: 241 IHKILDPNPKTRIRIEGIRKHP 262
           I  +L+ +P  R ++  I   P
Sbjct: 233 ILSMLNLDPSKRPQLSQIMAQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  124 bits (312), Expect = 6e-33
 Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 48/287 (16%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------REISIMKIVRHP 69
           IGEGT+  V   +N++TG+ VAMK        K R+  + +       REIS++K ++HP
Sbjct: 8   IGEGTYGVVYKGRNKKTGQIVAMK--------KIRLESEEEGVPSTAIREISLLKELQHP 59

Query: 70  NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIV L +VL   +++Y+I EF++    +  D +     +     + Y  Q++  +  CHS
Sbjct: 60  NIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS 119

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + V HRDLKP+NLL+D+ G +K++DFGL+      V +      T  Y APEVL      
Sbjct: 120 RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRY 179

Query: 188 GSAADVWSCGVILFVLMAGYLPF--GETDLPTLYK-----------------KINAAEFS 228
            +  D+WS G I F  MA   P   G++++  L++                  +   + +
Sbjct: 180 STPVDIWSIGTI-FAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238

Query: 229 CPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            P W                  L+ K+L  +P  RI  +    HP+F
Sbjct: 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  124 bits (313), Expect = 1e-32
 Identities = 87/323 (26%), Positives = 140/323 (43%), Gaps = 87/323 (26%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVR 67
           +YE+ + IG G +  V  A ++ TG  VA+K ++   +     +D  +I REI +++ +R
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISN--VFDDL-IDAKRILREIKLLRHLR 57

Query: 68  HPNIVRLHEVLASRTK-----VYIILEFVTGGELFD----KIVHQGRLLENDCRRYFQ-Q 117
           H NI+ L ++L   +      VYI    VT  EL +    K++   + L +D  +YF  Q
Sbjct: 58  HENIIGLLDILRPPSPEDFNDVYI----VT--ELMETDLHKVIKSPQPLTDDHIQYFLYQ 111

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG------ 171
           ++  + + HS  V HRDLKP N+L++S  +LK+ DFGL+    +GV+      G      
Sbjct: 112 ILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLA----RGVDPDEDEKGFLTEYV 167

Query: 172 -TPNYVAPEV-LSNRGYDGSAADVWSCGVILFVLMAG----------------------- 206
            T  Y APE+ LS+  Y   A D+WS G I   L+                         
Sbjct: 168 VTRWYRAPELLLSSSRYT-KAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226

Query: 207 ---------------YL----PFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
                          YL       +  L  L+   +             A  L+ K+L  
Sbjct: 227 SEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPE-----------AIDLLEKMLVF 275

Query: 248 NPKTRIRIEGIRKHPWFRKNYNP 270
           +PK RI  +    HP+  + ++P
Sbjct: 276 DPKKRITADEALAHPYLAQLHDP 298

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score =  122 bits (307), Expect = 2e-32
 Identities = 76/254 (29%), Positives = 131/254 (51%), Gaps = 11/254 (4%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +A + + + IG G F++V  A     G  VA+K +    ++  +      +EI ++K + 
Sbjct: 1   LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 60

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLL-ENDCRRYFQQLIDAVA 123
           HPN+++ +       ++ I+LE    G+L   I H   Q RL+ E    +YF QL  A+ 
Sbjct: 61  HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALE 120

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           H HS+ V HRD+KP N+ + + G +K+ D GL           H+  GTP Y++PE +  
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 180

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKINAAEFSCPF---WFSTGAT 238
            GY+   +D+WS G +L+ + A   PF   + +L +L KKI   ++  P     +S    
Sbjct: 181 NGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP-PLPSDHYSEELR 238

Query: 239 SLIHKILDPNPKTR 252
            L++  ++P+P+ R
Sbjct: 239 QLVNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  121 bits (306), Expect = 2e-32
 Identities = 62/203 (30%), Positives = 109/203 (53%), Gaps = 7/203 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +++   +GEG++  V  A ++ETG+ VA+KV+     L+     +I +EISI+K    P 
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQ-----EIIKEISILKQCDSPY 59

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           IV+ +      T ++I++E+   G + D + +    L E +      Q +  + + HS  
Sbjct: 60  IVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK 119

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
             HRD+K  N+LL+  G  K++DFG+S      +   +T  GTP ++APEV+   GY+ +
Sbjct: 120 KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYN-N 178

Query: 190 AADVWSCGVILFVLMAGYLPFGE 212
            AD+WS G+    +  G  P+ +
Sbjct: 179 KADIWSLGITAIEMAEGKPPYSD 201

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score =  122 bits (307), Expect = 3e-32
 Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 17/267 (6%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVRH 68
           +E+   +G+G F KV  A+N+ETG   A KV+   +   L+  MV     EI I+    H
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMV-----EIEILATCNH 68

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHS 127
           P IV+L        K++I++EF  GG +   ++   R L E   +   +Q+++A+ + HS
Sbjct: 69  PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS 128

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV-----LS 182
             + HRDLK  N+LL   G++K++DFG+SA   + ++   +  GTP ++APEV     + 
Sbjct: 129 MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMK 188

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATS 239
           +  YD   AD+WS G+ L  +     P  E +   +  KI  +E    S P  +S     
Sbjct: 189 DTPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRD 247

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
            +   LD +P+TR     + +HP+   
Sbjct: 248 FLKTALDKHPETRPSAAQLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  121 bits (306), Expect = 4e-32
 Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 33/276 (11%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG G  A V  A      E VA+K   L K        VD++++E+  M    H
Sbjct: 3   YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT----SVDELRKEVQAMSQCNH 58

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLLENDCRRYFQQLIDAVAHC 125
           PN+V+ +       ++++++ +++GG L D +     +G L E       ++++  + + 
Sbjct: 59  PNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL 118

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL----LHTTCGTPNYVAPEVL 181
           HS G  HRD+K  N+LL   G++K++DFG+SA    G +       T  GTP ++APEV+
Sbjct: 119 HSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178

Query: 182 SN-RGYDGSAADVWSCGVILFVLMAGYLPFG------------ETDLPTLYKKINAAEFS 228
               GYD   AD+WS G+    L  G  P+             + D P+L    +  ++S
Sbjct: 179 EQVHGYD-FKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYS 237

Query: 229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
             F        +I   L  +P  R   E + KH +F
Sbjct: 238 KSF------RKMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  120 bits (303), Expect = 9e-32
 Identities = 62/230 (26%), Positives = 100/230 (43%), Gaps = 16/230 (6%)

Query: 14  GRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           G+ +GEG F +V               VA+K L +    +     +  RE  IM+ + HP
Sbjct: 4   GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIE--EFLREARIMRKLDHP 61

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYF-QQLIDAVAHCHS 127
           NIV+L  V      + I++E++ GG+L D +  ++ + L       F  Q+   + +  S
Sbjct: 62  NIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLES 121

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
           K   HRDL   N L+     +K+SDFGLS                P  ++APE L    +
Sbjct: 122 KNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKF 181

Query: 187 DGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAEF-----SCP 230
             S +DVWS GV+L+ +   G  P+       + + +          +CP
Sbjct: 182 -TSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCP 230

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  120 bits (302), Expect = 2e-31
 Identities = 73/214 (34%), Positives = 117/214 (54%), Gaps = 6/214 (2%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-REISIMKIVRH 68
           KYE    +GEG++  V   +++ETG+ VA+K   +S     +MV +I  REI ++K +RH
Sbjct: 2   KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESE--DDKMVKKIAMREIRMLKQLRH 59

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
            N+V L EV   + ++Y++ EFV    L D   +   L E+  R+Y  Q++  +  CHS 
Sbjct: 60  ENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH 119

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            + HRD+KPEN+L+   G +K+ DFG +       E+      T  Y APE+L      G
Sbjct: 120 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYG 179

Query: 189 SAADVWSCGVILFVLMAG--YLPFGETDLPTLYK 220
            A D+W+ G ++  ++ G    P G++D+  LY 
Sbjct: 180 RAVDIWAVGCLVTEMLTGEPLFP-GDSDIDQLYH 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score =  120 bits (303), Expect = 7e-31
 Identities = 76/257 (29%), Positives = 115/257 (44%), Gaps = 49/257 (19%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +T+G G F +V  A   +T    AMK L K  +L    V  +K E  I+    +  +V+L
Sbjct: 7   KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKL 66

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           +     +  +Y +++++ GG++   ++      E   R Y  +L  A+   H  G  HRD
Sbjct: 67  YYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRD 126

Query: 135 LKPENLLLDSYGNLKVSDFGL----------------SALPQQGVE-------------- 164
           +KP+N+L+D  G++K++DFGL                S + Q  +E              
Sbjct: 127 IKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCG 186

Query: 165 -----------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY 207
                            L H+  GTPNY+APEVL  +GY     D WS GVILF ++ G 
Sbjct: 187 DRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT-QLCDWWSVGVILFEMLVGQ 245

Query: 208 LPF-GETDLPTLYKKIN 223
            PF   T   T  K IN
Sbjct: 246 PPFLAPTPTETQLKVIN 262

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score =  118 bits (296), Expect = 7e-31
 Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 11/254 (4%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +A +++ + IG G F++V  A      + VA+K +    ++  +      +EI ++K + 
Sbjct: 1   LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN 60

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLL-ENDCRRYFQQLIDAVA 123
           HPN+++  +      ++ I+LE    G+L   I +   Q RL+ E    +YF QL  AV 
Sbjct: 61  HPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE 120

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           H HS+ V HRD+KP N+ + + G +K+ D GL           H+  GTP Y++PE +  
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 180

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKINAAEFSCPF---WFSTGAT 238
            GY+   +D+WS G +L+ + A   PF   + +L +L +KI   ++  P     +S    
Sbjct: 181 NGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP-PLPTEHYSEKLR 238

Query: 239 SLIHKILDPNPKTR 252
            L+   + P+P  R
Sbjct: 239 ELVSMCIYPDPDQR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score =  118 bits (296), Expect = 8e-31
 Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 22/267 (8%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMK------VLAKSTILKHRMVDQIKREISIMKIVR 67
           G  IG G+F  V    N  +GE +A+K      V A S   K  M+D + REI+++K ++
Sbjct: 5   GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ 64

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           H NIV+          + I LE+V GG +   + + G   E   R + +Q++  + + H+
Sbjct: 65  HENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHN 124

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGT--PN------YVA 177
           +G+ HRD+K  N+L+D+ G +K+SDFG+S    + +E   L T      P+      ++A
Sbjct: 125 RGIIHRDIKGANILVDNKGGIKISDFGIS----KKLEANSLSTKTNGARPSLQGSVFWMA 180

Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFWFSTG 236
           PEV+    Y    AD+WS G ++  ++ G  PF + T L  ++K    A    P   S+ 
Sbjct: 181 PEVVKQTSYT-RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSE 239

Query: 237 ATSLIHKILDPNPKTRIRIEGIRKHPW 263
           A   + K  + +   R     + KHP+
Sbjct: 240 AIDFLEKTFEIDHNKRPTAAELLKHPF 266

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  117 bits (296), Expect = 2e-30
 Identities = 89/312 (28%), Positives = 140/312 (44%), Gaps = 68/312 (21%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------R 58
           R V K+++   IGEGT+ +V  A++++TGE VA+K        K R+ ++ +       R
Sbjct: 4   RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALK--------KVRLDNEKEGFPITAIR 55

Query: 59  EISIMKIVRHPNIVRLHEVLASRTKV----------YIILEFVTG---GELFDKIVHQGR 105
           EI I++ + H NIV L E++  +             Y++ E++     G L   +VH   
Sbjct: 56  EIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVH--- 112

Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
             E+  + + +QL++ + +CH K   HRD+K  N+LL++ G +K++DFGL+ L       
Sbjct: 113 FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR 172

Query: 166 LHTT-CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVL--------------------- 203
            +T    T  Y  PE+L      G A DVWSCG IL  L                     
Sbjct: 173 PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232

Query: 204 MAGY-----------LPFGETDLPT-LYKKINAAEFSCPFWFSTGATSLIHKILDPNPKT 251
           + G            LP+  T  P   Y++    EFS   +  T A  L+  +L  +P  
Sbjct: 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFS---FIPTPALDLLDHMLTLDPSK 289

Query: 252 RIRIEGIRKHPW 263
           R   E     PW
Sbjct: 290 RCTAEEALNSPW 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  117 bits (293), Expect = 2e-30
 Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 10/210 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLA--KSTILKHRMVDQIKREISIMKIVRH 68
           + +G+ +G G F +V    + +TG  +A+K +     +    + V+ ++ EI ++K +RH
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH 63

Query: 69  PNIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             IV+ +  L      K+ I +E++ GG + D++   G L EN  RRY +Q++  V++ H
Sbjct: 64  DRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ----QGVELLHTTCGTPNYVAPEVLS 182
           S  + HRD+K  N+L DS GN+K+ DFG S   Q     G  +   T GTP +++PEV+S
Sbjct: 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVT-GTPYWMSPEVIS 182

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
             GY G  ADVWS    +  ++    P+ E
Sbjct: 183 GEGY-GRKADVWSVACTVVEMLTEKPPWAE 211

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  116 bits (294), Expect = 2e-30
 Identities = 76/283 (26%), Positives = 137/283 (48%), Gaps = 44/283 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRH 68
            +E+   IGEGT+ KV  A++++TG+ VA+K++     +     ++IK E +I+ K   H
Sbjct: 7   IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMD----IIEDEEEEIKEEYNILRKYSNH 62

Query: 69  PNIVRLHEV------LASRTKVYIILEFVTGG---ELFDKIVHQGRLLENDCRRYF-QQL 118
           PNI   +          +  ++++++E   GG   +L   +  +G+ L+ +   Y  ++ 
Sbjct: 63  PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRET 122

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +A+ H   V HRD+K +N+LL     +K+ DFG+SA     +   +T  GTP ++AP
Sbjct: 123 LRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAP 182

Query: 179 EVLS-----NRGYDGSAADVWSCGVILFVLMAGYLPFGE------------TDLPTLYKK 221
           EV++     +  YD + +DVWS G+    L  G  P  +               PTL   
Sbjct: 183 EVIACDEQPDASYD-ARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSP 241

Query: 222 IN-AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPW 263
            N + +F+            I + L  N + R  +E + +HP+
Sbjct: 242 ENWSKKFN----------DFISECLIKNYEQRPFMEELLEHPF 274

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  116 bits (294), Expect = 2e-30
 Identities = 74/276 (26%), Positives = 133/276 (48%), Gaps = 22/276 (7%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM--VDQIKREISIMKIVR 67
            + +   IG+G+F +V  A ++ T + VA+KV+     L+     ++ I++EI  +   R
Sbjct: 2   LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID----LEEAEDEIEDIQQEIQFLSQCR 57

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P I + +      +K++II+E+  GG   D ++  G+L E       ++++  + + H 
Sbjct: 58  SPYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHE 116

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           +G  HRD+K  N+LL   G++K++DFG+S      +   +T  GTP ++APEV+   GYD
Sbjct: 117 EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYD 176

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETD-------LPTLY-KKINAAEFSCPFWFSTGATS 239
              AD+WS G+    L  G  P  +         +P      +   +FS PF        
Sbjct: 177 -EKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPF------KD 229

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
            +   L+ +PK R   + + KH + +K       + 
Sbjct: 230 FVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTL 265

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score =  116 bits (291), Expect = 4e-30
 Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 14/265 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLA---KSTILKHRMVDQIKREISIMKIVRHPN 70
           G+ +G G F+    A++ +TG  +A+K +     ++  +  +V+ +++EI +M  + HP+
Sbjct: 5   GQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH 64

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+R+       +   + +E++ GG +   +   G   E     Y +QL+  +++ H   +
Sbjct: 65  IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQI 124

Query: 131 YHRDLKPENLLLDSYGN-LKVSDFGLSA-LPQQGV---ELLHTTCGTPNYVAPEVLSNRG 185
            HRD+K  NLL+DS G  L+++DFG +A L  +G    E      GT  ++APEVL    
Sbjct: 125 IHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQ 184

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEF-SCPFWFSTGATSL 240
           Y G + DVWS G ++  +     P+        L  ++K  +A    S P   S G   +
Sbjct: 185 Y-GRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDV 243

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFR 265
             + L+  P+ R     + KHP FR
Sbjct: 244 TLRCLELQPEDRPPSRELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score =  115 bits (290), Expect = 6e-30
 Identities = 83/275 (30%), Positives = 141/275 (51%), Gaps = 20/275 (7%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR---EISIMKIVR 67
           +E+   +G+G F KV  AQN+ETG      VLA + ++  +  ++++    EI I+    
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETG------VLAAAKVIDTKSEEELEDYMVEIDILASCD 60

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCH 126
           HPNIV+L +       ++I++EF  GG +   ++   R L E   R   +Q ++A+ + H
Sbjct: 61  HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH 120

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL----- 181
              + HRDLK  N+L    G++K++DFG+SA   + ++   +  GTP ++APEV+     
Sbjct: 121 ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 180

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGAT 238
            +R YD   ADVWS G+ L  +     P  E +   +  KI  +E    + P  +S+   
Sbjct: 181 KDRPYD-YKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFK 239

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVK 272
             + K L+ N   R     + +HP+   N N P++
Sbjct: 240 DFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKPIR 274

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  115 bits (291), Expect = 1e-29
 Identities = 90/330 (27%), Positives = 141/330 (42%), Gaps = 87/330 (26%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------- 57
           R V ++E    IGEGT+  V  A++  +GE VA+K        K RM D  +        
Sbjct: 4   RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALK--------KVRM-DNERDGIPISSL 54

Query: 58  REISIMKIVRHPNIVRLHEVLASR--TKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRY 114
           REI+++  +RHPNIV L EV+  +    +++++E+                LL+N    +
Sbjct: 55  REITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE---------QDLASLLDNMPTPF 105

Query: 115 --------FQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGV 163
                     QL+  + + H   + HRDLK  NLLL   G LK++DFGL+    LP + +
Sbjct: 106 SESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPM 165

Query: 164 ELLHTTCGTPN-----YVAPEVLSNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDL- 215
                   TP      Y APE+L       +A D+W+ G IL  L+A    LP G++++ 
Sbjct: 166 --------TPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP-GKSEIE 216

Query: 216 -----------------PTLYKKINAAEFSCP----------F-WFSTGATSLIHKILDP 247
                            P         +F+ P          F W S     L++ +L  
Sbjct: 217 QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMY 276

Query: 248 NPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
           +PK R   E   +  +F++   P+ C  E 
Sbjct: 277 DPKKRATAEEALESSYFKE--KPLPCEPEM 304

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score =  114 bits (287), Expect = 1e-29
 Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 9/261 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVR 67
           +Y + + +G+G+F  V   ++++      +KVL +  +  L      Q  +E  ++  + 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKI---VHQGRLL-ENDCRRYFQQLIDAVA 123
           HP IV+ H     R    II E+  G +L  K+    H G+ L EN    +F QL+  V 
Sbjct: 61  HPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           + H + + HRDLK +N+ L +   LK+ DFG+S L     +L  T  GTP Y++PE L +
Sbjct: 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKH 179

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           +GYD S +D+WS G IL+ +      F G+  L  + + +     S P  +S    S++ 
Sbjct: 180 QGYD-SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQ 238

Query: 243 KILDPNPKTRIRIEGIRKHPW 263
            +L+ +P  R     I ++P+
Sbjct: 239 SMLNKDPSLRPSAAEILRNPF 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score =  114 bits (287), Expect = 2e-29
 Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 13/262 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNL 65

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I + G     E     Y  +++  +   H +   +
Sbjct: 66  AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVY 125

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD YG++++SD GL+    +G E +    GT  Y+APEVL+N+ Y   + D
Sbjct: 126 RDLKPENILLDDYGHIRISDLGLAVKIPEG-ESIRGRVGTVGYMAPEVLNNQRY-TLSPD 183

Query: 193 VWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            W  G +++ ++ G  PF     +     + +++   E      FS  A S+   +L  +
Sbjct: 184 YWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKD 243

Query: 249 PKTRI--RIEG---IRKHPWFR 265
           PK R+  + EG   +++HP+FR
Sbjct: 244 PKQRLGCQEEGAGEVKRHPFFR 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  113 bits (286), Expect = 2e-29
 Identities = 75/271 (27%), Positives = 123/271 (45%), Gaps = 34/271 (12%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVL---AKSTILKHRMVDQIKREISIMKIVRHPNI 71
             +G G    V    +R TG+ +A+K +       I K     QI RE+ I+     P I
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQK-----QILRELDILHKCNSPYI 61

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKI--VHQGRLLENDCRRYFQQLIDAVAHCHSK- 128
           V  +    +   + I +E++ GG L DKI    QGR+ E    +    ++  + + H K 
Sbjct: 62  VGFYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH 120

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            + HRD+KP N+L++S G +K+ DFG+S   Q    L  T  GT +Y+APE +    Y  
Sbjct: 121 KIIHRDVKPSNILVNSRGQIKLCDFGVSG--QLVNSLAKTFVGTSSYMAPERIQGNDYSV 178

Query: 189 SAADVWSCGVILFVLMAGYLPFG------ETDLPTLYKKIN-------AAEFSCPFWFST 235
             +D+WS G+ L  L  G  P+       +     L   +N       + +FS  F    
Sbjct: 179 K-SDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDF---- 233

Query: 236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
                ++  L  +P+ R   + + +HP+ +K
Sbjct: 234 --QDFVNLCLIKDPRERPSYKELLEHPFIKK 262

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  113 bits (285), Expect = 5e-29
 Identities = 76/226 (33%), Positives = 118/226 (52%), Gaps = 28/226 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL--------AKSTILKHRMVDQIKREIS 61
           +YE    IGEGT+  V  A++R T E++A+K +          ST +         REIS
Sbjct: 3   QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAI---------REIS 53

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL-FDKIVHQGRLLENDCR---RYFQQ 117
           ++K ++H NIVRL +V+ S  ++Y++ E++   +L   K +        + R    Y  Q
Sbjct: 54  LLKEMQHGNIVRLQDVVHSEKRLYLVFEYL---DLDLKKHMDSSPDFAKNPRLIKTYLYQ 110

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           ++  +A+CHS  V HRDLKP+NLL+D   N LK++DFGL+      V        T  Y 
Sbjct: 111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYR 170

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYK 220
           APE+L    +  +  D+WS G I F  M    P   G++++  L+K
Sbjct: 171 APEILLGSRHYSTPVDIWSVGCI-FAEMVNQKPLFPGDSEIDELFK 215

Length = 294

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score =  113 bits (283), Expect = 5e-29
 Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 10/210 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLA--KSTILKHRMVDQIKREISIMKIVRH 68
           + +G+ +G+G F +V    + +TG  +A+K +     +    + V+ ++ EI ++K + H
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH 63

Query: 69  PNIVRLHEVL--ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             IV+ +  L       + I +E + GG + D++   G L EN  R+Y +Q+++ V++ H
Sbjct: 64  ERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ----QGVELLHTTCGTPNYVAPEVLS 182
           S  + HRD+K  N+L DS GN+K+ DFG S   Q     G  +   T GTP +++PEV+S
Sbjct: 124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVT-GTPYWMSPEVIS 182

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
             GY G  AD+WS G  +  ++    P+ E
Sbjct: 183 GEGY-GRKADIWSVGCTVVEMLTEKPPWAE 211

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score =  113 bits (283), Expect = 5e-29
 Identities = 67/207 (32%), Positives = 116/207 (56%), Gaps = 10/207 (4%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLA--KSTILKHRMVDQIKREISIMKIVRHPNI 71
           G+ +G+G F +V    + +TG  +A K +     +    + V  ++ EI ++K ++H  I
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI 66

Query: 72  VRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           V+ +  L  R +  + I +E++ GG + D++   G L E+  R+Y +Q+++ +++ HS  
Sbjct: 67  VQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM 126

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQ----QGVELLHTTCGTPNYVAPEVLSNRG 185
           + HRD+K  N+L DS GN+K+ DFG S   Q     G  +   T GTP +++PEV+S  G
Sbjct: 127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVT-GTPYWMSPEVISGEG 185

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGE 212
           Y G  ADVWS G  +  ++    P+ E
Sbjct: 186 Y-GRKADVWSLGCTVVEMLTEKPPWAE 211

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  113 bits (286), Expect = 5e-29
 Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 68/312 (21%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK----REISIMKIV 66
           YE+   +GEGTF +V  A+  +TG  VA+K      IL H   D       REI I+K +
Sbjct: 10  YEILGKLGEGTFGEVYKARQIKTGRVVALK-----KILMHNEKDGFPITALREIKILKKL 64

Query: 67  RHPNIVRLHEVLASRTK--------VYIILEFVT---GGELFDKIVHQGRLLENDCRRYF 115
           +HPN+V L ++   R          VY++  ++     G L +  V    L E+  + Y 
Sbjct: 65  KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVK---LTESQIKCYM 121

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--------ALPQQGVELLH 167
            QL++ + + H   + HRD+K  N+L+D+ G LK++DFGL+             G     
Sbjct: 122 LQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTR 181

Query: 168 TTCG---TPNYVAPE-VLSNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYK- 220
                  T  Y  PE +L  R Y  +A D+W  G +   +      L  G++D+  L+  
Sbjct: 182 KYTNLVVTRWYRPPELLLGERRY-TTAVDIWGIGCVFAEMFTRRPILQ-GKSDIDQLHLI 239

Query: 221 --------KINAAEFS----CPFWFST----------------GATSLIHKILDPNPKTR 252
                   +     +     C    S                     L+ K+L  +P  R
Sbjct: 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKR 299

Query: 253 IRIEGIRKHPWF 264
           +      +HP+F
Sbjct: 300 LTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score =  112 bits (283), Expect = 7e-29
 Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 19/265 (7%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
           + E+   IG G +  V   ++  TG  VA+K++   T      V  I+RE++++  +R  
Sbjct: 5   RLEL---IGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQS 59

Query: 69  --PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             PNI + +       +++II+E+  GG +   ++  G + E       ++++ A+ + H
Sbjct: 60  QPPNITKYYGSYLKGPRLWIIMEYAEGGSV-RTLMKAGPIAEKYISVIIREVLVALKYIH 118

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
             GV HRD+K  N+L+ + GN+K+ DFG++AL  Q      T  GTP ++APEV++  + 
Sbjct: 119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKY 178

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP-----FWFSTGATSL 240
           YD + AD+WS G+ ++ +  G  P+ + D    ++ +     S P       +S      
Sbjct: 179 YD-TKADIWSLGITIYEMATGNPPYSDVD---AFRAMMLIPKSKPPRLEDNGYSKLLREF 234

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFR 265
           +   LD  PK R+  E + K  W +
Sbjct: 235 VAACLDEEPKERLSAEELLKSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score =  114 bits (286), Expect = 8e-29
 Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 17/269 (6%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + + TG+  AMK+L K  +LK       + E  ++       
Sbjct: 3   FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + RL E+  R Y  +++ A+   H  G
Sbjct: 63  ITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG 122

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFG--LSALPQQGVELLHTTCGTPNYVAPEVL----SN 183
             HRD+KP+N+LLD  G+++++DFG  L  L    V+      GTP+Y++PE+L      
Sbjct: 123 YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSN-VAVGTPDYISPEILQAMEDG 181

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW---FSTGAT 238
           +G  G   D WS GV ++ ++ G  PF    L   Y KI   +  F  P      S  A 
Sbjct: 182 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAK 241

Query: 239 SLIHKILDPNPKTRIRIEGI---RKHPWF 264
            LI +++   P+TR+   G+   + HP+F
Sbjct: 242 DLIRRLICS-PETRLGRNGLQDFKDHPFF 269

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  112 bits (282), Expect = 8e-29
 Identities = 64/269 (23%), Positives = 107/269 (39%), Gaps = 31/269 (11%)

Query: 15  RTIGEGTFAKVRFA---QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + +GEG F +V              VA+K L +    + R      +E  +MK + HPN+
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEER--KDFLKEARVMKKLGHPNV 58

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF--------QQLID--- 120
           VRL  V      +Y++LE++ GG+L         L ++              + L+    
Sbjct: 59  VRLLGVCTEEEPLYLVLEYMEGGDL------LDYLRKSRPVFPSPEKSTLSLKDLLSFAI 112

Query: 121 ----AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TPN- 174
                + +  SK   HRDL   N L+     +K+SDFGLS            T G  P  
Sbjct: 113 QIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIR 172

Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEF-SCPFW 232
           ++APE L +  +  S +DVWS GV+L+ +   G  P+       + + +        P +
Sbjct: 173 WMAPESLKDGIFT-SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEY 231

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                  L+      +P+ R     + + 
Sbjct: 232 CPDELYELMLSCWQLDPEDRPTFSELVER 260

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score =  113 bits (283), Expect = 9e-29
 Identities = 81/262 (30%), Positives = 129/262 (49%), Gaps = 14/262 (5%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V   Q R TG+  A K L K  + K +  +    E  I+  V    IV L  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAY 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAHCHSKGVYH 132
              ++T + +++  + GG+L   I +         E     Y  Q+I  + H H + + +
Sbjct: 61  AFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD+ GN+++SD GL+   + G        GTP ++APE+L    YD S  D
Sbjct: 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFS-VD 179

Query: 193 VWSCGVILFVLMAGYLPF---GE-TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            ++ GV L+ ++A   PF   GE  +   L ++I     + P  FS  + S    +L  +
Sbjct: 180 YFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKD 239

Query: 249 PKTRI-----RIEGIRKHPWFR 265
           P+ R+       +G+R HP FR
Sbjct: 240 PEKRLGFRDGNCDGLRTHPLFR 261

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score =  113 bits (284), Expect = 1e-28
 Identities = 74/267 (27%), Positives = 128/267 (47%), Gaps = 13/267 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + +   +  AMK+L K  +LK       + E  ++    +  
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + RL E+  R Y  +++ A+   H   
Sbjct: 63  ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH 122

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLS----NR 184
             HRD+KP+N+L+D  G+++++DFG    L + G        GTP+Y++PE+L      +
Sbjct: 123 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGK 182

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI--NAAEFSCPFW---FSTGATS 239
           G  G   D WS GV ++ ++ G  PF    L   Y KI  +   F  P      S  A  
Sbjct: 183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD 242

Query: 240 LIHKILDPNPKT--RIRIEGIRKHPWF 264
           LI +++        +  IE  ++HP+F
Sbjct: 243 LIRRLICSREHRLGQNGIEDFKQHPFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score =  112 bits (282), Expect = 1e-28
 Identities = 64/194 (32%), Positives = 114/194 (58%), Gaps = 5/194 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A+ + +G  VA+K++    + K +  + +  E+ IM+  +H N+V +++
Sbjct: 29  IGEGSTGIVCIAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHQNVVEMYK 85

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D IV Q RL E       + ++ A+ + HS+GV HRD+K
Sbjct: 86  SYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIK 144

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V    +  GTP ++APEV+S   Y G+  D+WS 
Sbjct: 145 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPY-GTEVDIWSL 203

Query: 197 GVILFVLMAGYLPF 210
           G+++  ++ G  P+
Sbjct: 204 GIMVIEMVDGEPPY 217

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score =  112 bits (281), Expect = 2e-28
 Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 17/265 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 65

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I + G     E     Y  ++   +   H + + +
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVY 125

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD YG++++SD GL+    +G E +    GT  Y+APEV+ N  Y   + D
Sbjct: 126 RDLKPENILLDDYGHIRISDLGLAVEIPEG-ETIRGRVGTVGYMAPEVVKNERY-TFSPD 183

Query: 193 VWSCGVILFVLMAGYLPFGETDLPTLYKKI------NAAEFSCPFWFSTGATSLIHKILD 246
            W  G +++ ++ G  PF +       +++      +  E+S    FS  A S+  ++L 
Sbjct: 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEK--FSEAARSICRQLLT 241

Query: 247 PNPKTRI-----RIEGIRKHPWFRK 266
            +P  R+       E ++ HP+FR 
Sbjct: 242 KDPGFRLGCRGEGAEEVKAHPFFRT 266

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score =  111 bits (279), Expect = 3e-28
 Identities = 77/259 (29%), Positives = 127/259 (49%), Gaps = 20/259 (7%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGES-VAMK-------VLAKSTILKHRMVDQIKREISI 62
           Y V   +G G F  V   + +  G++ +A+K          K    + + +  I  E++I
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 63  MK-IVRHPNIVRLHEVLASRTKVYIILEFVTG---GELFDKIVHQG-RLLENDCRRYFQQ 117
           +K  +RHPNIVR ++      ++YI+++ + G   GE F+ +  +  R  E      F Q
Sbjct: 62  IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121

Query: 118 LIDAVAHCH-SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           ++ A+ + H  K + HRDL P N++L     + ++DFGL A  +Q    L +  GT  Y 
Sbjct: 122 MVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL-AKQKQPESKLTSVVGTILYS 180

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF---WF 233
            PE++ N  Y G  ADVW+ G IL+ +     PF  T++ +L  KI  A +  P     +
Sbjct: 181 CPEIVKNEPY-GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE-PLPEGMY 238

Query: 234 STGATSLIHKILDPNPKTR 252
           S   T +I   L P+ + R
Sbjct: 239 SEDVTDVITSCLTPDAEAR 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  111 bits (280), Expect = 3e-28
 Identities = 89/298 (29%), Positives = 134/298 (44%), Gaps = 48/298 (16%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
            YE    IGEGT+ KV  A+++ TG+ VA+K   +  + +  +     REIS+++++   
Sbjct: 2   AYEKLEKIGEGTYGKVYKARDKNTGKLVALKK-TRLEMDEEGIPPTALREISLLQMLSES 60

Query: 69  PNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQGR-----LLENDCRRYFQQL 118
             IVRL +V     K     +Y++ E++   +L   +   GR     L     + +  QL
Sbjct: 61  IYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQL 119

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
           +  VAHCH  GV HRDLKP+NLL+D     LK++D GL       V+       T  Y A
Sbjct: 120 LKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRA 179

Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDL------------------PT 217
           PEVL    +  +  D+WS G I F  M+   P   G+++L                  P 
Sbjct: 180 PEVLLGSTHYSTPVDIWSVGCI-FAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG 238

Query: 218 LYKKINAAEFSCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
           + K  +  EF  P W            S     L+ K+L  +P  RI  +    HP+F
Sbjct: 239 VSKLRDWHEF--PQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score =  110 bits (276), Expect = 7e-28
 Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 15/261 (5%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREI--SIMKIVRHPNIVR 73
           IG G F +V   +  +TG+  AMK L K  I +K      +   I  S++     P IV 
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           +     +  K+  IL+ + GG+L   +   G   E + R Y  ++I  + H H++ V +R
Sbjct: 62  MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYR 121

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RGYDGSAAD 192
           DLKP N+LLD +G++++SD GL+       +  H + GT  Y+APEVL     YD S+AD
Sbjct: 122 DLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQKGVAYD-SSAD 178

Query: 193 VWSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
            +S G +LF L+ G+ PF +    D   + +         P  FS    SL+  +L  + 
Sbjct: 179 WFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDV 238

Query: 250 KTRIRIEG-----IRKHPWFR 265
             R+   G     +++HP+FR
Sbjct: 239 NRRLGCLGRGAQEVKEHPFFR 259

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score =  110 bits (276), Expect = 7e-28
 Identities = 63/194 (32%), Positives = 111/194 (57%), Gaps = 5/194 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  + TG+ VA+K   K  + K +  + +  E+ IM+   H N+V ++ 
Sbjct: 30  IGEGSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHENVVDMYN 86

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A+++ H++GV HRD+K
Sbjct: 87  SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 145

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL S G +K+SDFG  A   + V    +  GTP ++APEV+S   Y G+  D+WS 
Sbjct: 146 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPY-GTEVDIWSL 204

Query: 197 GVILFVLMAGYLPF 210
           G+++  ++ G  P+
Sbjct: 205 GIMVIEMIDGEPPY 218

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score =  110 bits (275), Expect = 9e-28
 Identities = 81/266 (30%), Positives = 135/266 (50%), Gaps = 19/266 (7%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSL 65

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF--QQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I H G     + R  F   ++   +   H + + +
Sbjct: 66  AYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVY 125

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD +G++++SD GL+    +G + +    GT  Y+APEV+ N  Y  S  D
Sbjct: 126 RDLKPENILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNERYTFS-PD 183

Query: 193 VWSCGVILFVLMAGYLPFGE-------TDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
            W+ G +L+ ++AG  PF +        ++  L K++   E+S    FS  A SL   +L
Sbjct: 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-EEYSEK--FSPDARSLCKMLL 240

Query: 246 DPNPKTRIRIEG-----IRKHPWFRK 266
             +PK R+  +G     +++HP F++
Sbjct: 241 CKDPKERLGCQGGGAREVKEHPLFKQ 266

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score =  108 bits (272), Expect = 2e-27
 Identities = 73/253 (28%), Positives = 129/253 (50%), Gaps = 6/253 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G++ +V   ++R  G+   +K L        R     ++E  ++  ++HPNIV  
Sbjct: 6   RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAY 64

Query: 75  HEVLASRT-KVYIILEFVTGGELFDKIVHQ-GRLL-ENDCRRYFQQLIDAVAHCHSKGVY 131
            E        +YI++ F  GG+L+ K+  Q G+LL EN    +F Q+  A+ + H K + 
Sbjct: 65  RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHIL 124

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           HRDLK +N+ L     +KV D G++ + +   ++  T  GTP Y++PE+ SN+ Y+   +
Sbjct: 125 HRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYN-YKS 183

Query: 192 DVWSCGVILFVLMAGYLPFGETDLPTL-YKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
           DVW+ G  ++ +      F   D+ +L Y+ I       P  +S     LI  +L   P+
Sbjct: 184 DVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPE 243

Query: 251 TRIRIEGIRKHPW 263
            R  ++ I + P+
Sbjct: 244 KRPSVKSILRQPY 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score =  114 bits (286), Expect = 2e-27
 Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 14/234 (5%)

Query: 32  ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL-HEVLASRTKVYIILEF 90
            TG  VA+K+L      +     + +RE ++   + HPNIV L     A    ++ + E+
Sbjct: 1   MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEY 60

Query: 91  VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---N 147
           V G  L + +   G L   +  R   Q++DA+A  H++G+ HRDLKP+N+++   G   +
Sbjct: 61  VPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPH 120

Query: 148 LKVSDFGLSAL-------PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVIL 200
            KV DFG+  L           +       GTP Y APE L         +D+++ G+I 
Sbjct: 121 AKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVT-PNSDLYAWGLIF 179

Query: 201 FVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWF-STGATSLIHKILDPNPKTR 252
              + G     G +    LY++++  + S P W        ++ K L+ +P+ R
Sbjct: 180 LECLTGQRVVQGASVAEILYQQLSPVDVSLPPWIAGHPLGQVLRKALNKDPRQR 233

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score =  110 bits (275), Expect = 2e-27
 Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 13/267 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + + T    AMK+L K  +LK       + E +++       
Sbjct: 3   FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQW 62

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + RL E+  R Y  +++ A+   H   
Sbjct: 63  ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH 122

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLS----NR 184
             HRD+KP+N+LLD  G+++++DFG    + Q G        GTP+Y++PE+L       
Sbjct: 123 YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGM 182

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFWF---STGATS 239
           G  G   D WS GV ++ ++ G  PF    L   Y KI   E  F  P      S  A  
Sbjct: 183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKD 242

Query: 240 LIHKILDPNPKT--RIRIEGIRKHPWF 264
           LI +++    +   +  IE  +KH +F
Sbjct: 243 LIQRLICSRERRLGQNGIEDFKKHAFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  108 bits (273), Expect = 5e-27
 Identities = 96/306 (31%), Positives = 145/306 (47%), Gaps = 57/306 (18%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHP 69
           Y+    IGEG +  V  A ++ TG  VA+K   K +  +H+   Q   REI I++  +H 
Sbjct: 7   YQNLSYIGEGAYGMVCSATHKPTGVKVAIK---KISPFEHQTFCQRTLREIKILRRFKHE 63

Query: 70  NIVRLHEVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVA 123
           NI+ + +++   +      VYI+ E +   +L+  I  Q   L ND  +YF  Q++  + 
Sbjct: 64  NIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQH--LSNDHIQYFLYQILRGLK 120

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL--SALPQQGVELLHTT-----CGTPNYV 176
           + HS  V HRDLKP NLLL++  +LK+ DFGL   A P+      HT        T  Y 
Sbjct: 121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD----HTGFLTEYVATRWYR 176

Query: 177 APEV-LSNRGYDGSAADVWSCGVILFVLMAG--------Y-----LPFGETDLPT---LY 219
           APE+ L+++GY   A D+WS G IL  +++         Y     L  G    P+   L 
Sbjct: 177 APEIMLNSKGYT-KAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN 235

Query: 220 KKIN--AAEF--SCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
             I+  A  +  S PF     W          A  L+ K+L  NP  RI +E    HP+ 
Sbjct: 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYL 295

Query: 265 RKNYNP 270
            + ++P
Sbjct: 296 EQYHDP 301

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score =  107 bits (269), Expect = 6e-27
 Identities = 72/262 (27%), Positives = 122/262 (46%), Gaps = 14/262 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMK--VLAKSTILK-HRMVDQIKREISIMKIVRHPN 70
           G  +G+G +  V +      G+ +A+K   L  S +L   +  ++++ E+ ++K ++H N
Sbjct: 5   GEVLGKGAYGTV-YCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVN 63

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV+          + I +EFV GG +   +   G L E    +Y +Q++D VA+ H+  V
Sbjct: 64  IVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCV 123

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLS------ALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HRD+K  N++L   G +K+ DFG +       L      +L +  GTP ++APEV++  
Sbjct: 124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES 183

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTGATSLI 241
           GY G  +D+WS G  +F +  G  P    D       I A        P  FS  A   +
Sbjct: 184 GY-GRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFV 242

Query: 242 HKILDPNPKTRIRIEGIRKHPW 263
              L  +   R     + +H +
Sbjct: 243 TSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  108 bits (272), Expect = 9e-27
 Identities = 100/349 (28%), Positives = 151/349 (43%), Gaps = 77/349 (22%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL---------AKSTILKHRMVDQIKREI 60
           KYE+ + +G+G +  V  A +R T E VA+K +         A+ T           REI
Sbjct: 8   KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTF----------REI 57

Query: 61  SIMKIVR-HPNIVRLHEVL-ASRTK-VYIILEFVTGGELFDKIVHQGRLLENDCRRY-FQ 116
             ++ +  HPNIV+L  V+ A   K +Y++ E++   E     V +  +LE+  +RY   
Sbjct: 58  MFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM---ETDLHAVIRANILEDVHKRYIMY 114

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL----SALPQ-QGVELLHTTCG 171
           QL+ A+ + HS  V HRDLKP N+LL+S   +K++DFGL    S L +     +L     
Sbjct: 115 QLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVA 174

Query: 172 TPNYVAPEVL--SNRGYDGSAADVWSCGVILFVLMAG----------------------- 206
           T  Y APE+L  S R Y     D+WS G IL  ++ G                       
Sbjct: 175 TRWYRAPEILLGSTR-YT-KGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP 232

Query: 207 --------YLPFGET---DLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI 255
                     PF  T    LP+  +K            S  A  L+ K+L  NP  R+  
Sbjct: 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA---SDDALDLLKKLLVFNPNKRLTA 289

Query: 256 EGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKV 304
           E   +HP+  + +NP     +E V    +    DD   +    +  NK+
Sbjct: 290 EEALEHPYVAQFHNP----SDEPVLPYPITIPLDD-NVKLSVAEYRNKL 333

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  108 bits (272), Expect = 9e-27
 Identities = 87/314 (27%), Positives = 134/314 (42%), Gaps = 66/314 (21%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMK---------VLAKSTILKHRMVDQIKRE 59
            KY   + IG G +  V  A+N ET E VA+K         + AK T+          RE
Sbjct: 5   TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTL----------RE 54

Query: 60  ISIMKIVRHPNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQ----GRLLEND 110
           I +++ + H N++ + +++    +     VYI+ E      L D  +HQ     + L +D
Sbjct: 55  IKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE------LMDTDLHQIIRSSQTLSDD 108

Query: 111 -CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT 169
            C+ +  QL+  + + HS  V HRDLKP NLLL++  +LK+ DFGL+    +  + +   
Sbjct: 109 HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEY 168

Query: 170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI------- 222
             T  Y APE+L N     +A DVWS G I   L+     F   D     K I       
Sbjct: 169 VVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228

Query: 223 -----------NAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGI 258
                       A  +  S P+             +  A  L+ K+L  +P  RI +E  
Sbjct: 229 SEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEA 288

Query: 259 RKHPWFRKNYNPVK 272
             HP+    ++P  
Sbjct: 289 LAHPYLASLHDPSD 302

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  107 bits (267), Expect = 1e-26
 Identities = 72/214 (33%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           K+EV   +GEG +  V   +++ET E VA+K   K +     + +   RE+ +++ ++  
Sbjct: 2   KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKF-KDSEENEEVKETTLRELKMLRTLKQE 60

Query: 70  NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIV L E    R K+Y++ E+V     EL ++      +     R Y  QLI A+  CH 
Sbjct: 61  NIVELKEAFRRRGKLYLVFEYVEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHK 118

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSNRGY 186
             + HRD+KPENLL+     LK+ DFG +    +G    +T    T  Y +PE+L    Y
Sbjct: 119 NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPY 178

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLY 219
            G A D+WS G IL  L  G   F GE+++  L+
Sbjct: 179 -GKAVDMWSVGCILGELSDGQPLFPGESEIDQLF 211

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score =  106 bits (265), Expect = 2e-26
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 10/260 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG GT+  V  A+N  TGE  A+KV+    +        +++EI +MK  +H N
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEIIMMKDCKHSN 67

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV        R K++I +EF  GG L D     G L E+      ++ +  + + HSKG 
Sbjct: 68  IVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGK 127

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV--LSNRGYDG 188
            HRD+K  N+LL   G++K++DFG+SA     +    +  GTP ++APEV  +  +G   
Sbjct: 128 MHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYN 187

Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP-----FWFSTGATSLIHK 243
              D+W+ G+    L     P  +         +  + F  P       +S      +  
Sbjct: 188 QLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKM 247

Query: 244 ILDPNPKTRIRIEGIRKHPW 263
            L  NPK R   E + +HP+
Sbjct: 248 ALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score =  106 bits (266), Expect = 2e-26
 Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 18/262 (6%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  + +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 28  IGEGSTGIVCIATVKSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 85  SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIK 143

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V    +  GTP ++APE++S   Y G   D+WS 
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPY-GPEVDIWSL 202

Query: 197 GVILFVLMAGYLP-FGETDLP-------TLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           G+++  ++ G  P F E  L         L  K+       P          + ++L  +
Sbjct: 203 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPS-----LKGFLDRLLVRD 257

Query: 249 PKTRIRIEGIRKHPWFRKNYNP 270
           P  R     + KHP+  K   P
Sbjct: 258 PAQRATAAELLKHPFLAKAGPP 279

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  106 bits (267), Expect = 3e-26
 Identities = 79/316 (25%), Positives = 135/316 (42%), Gaps = 69/316 (21%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK------- 57
              V+KYE    IG+GTF +V  A++++T + VA+K        K  M ++ +       
Sbjct: 8   CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALK--------KVLMENEKEGFPITAL 59

Query: 58  REISIMKIVRHPNIVRLHEVLAS--------RTKVYIILEFVT---GGELFDKIVHQGRL 106
           REI I+++++H N+V L E+  +        +   Y++ EF      G L +K V   + 
Sbjct: 60  REIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNV---KF 116

Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGV 163
             ++ ++  + L++ + + H   + HRD+K  N+L+   G LK++DFGL+   +L +   
Sbjct: 117 TLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK 176

Query: 164 ELLHTT-CGTPNYVAPEVLSN-RGYDGSAADVWSCGVIL------FVLMAG--------- 206
              +T    T  Y  PE+L   R Y G   D+W  G I+        +M G         
Sbjct: 177 PNRYTNRVVTLWYRPPELLLGERDY-GPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTL 235

Query: 207 ------------------YLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
                                F + +LP   K+        P+     A  LI K+L  +
Sbjct: 236 ISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLK-PYVKDPHALDLIDKLLVLD 294

Query: 249 PKTRIRIEGIRKHPWF 264
           P  RI  +    H +F
Sbjct: 295 PAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  105 bits (265), Expect = 3e-26
 Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 12/217 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS----TILKHRMVDQIKREISIMKI 65
           KYE    IGEG++  V   +NRETG+ VA+K   +S     I K  +     REI ++K 
Sbjct: 2   KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIAL-----REIRMLKQ 56

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           ++HPN+V L EV   + K++++ E+     L +   +   + E+  ++   Q + AV  C
Sbjct: 57  LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFC 116

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H     HRD+KPEN+L+   G +K+ DFG + +     +       T  Y APE+L    
Sbjct: 117 HKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDT 176

Query: 186 YDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYK 220
             G   DVW+ G +   L+ G  P   G++D+  LY 
Sbjct: 177 QYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYL 212

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  105 bits (265), Expect = 4e-26
 Identities = 69/213 (32%), Positives = 99/213 (46%), Gaps = 34/213 (15%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLA---------KSTILKHRMVDQIKREIS 61
           YE    IGEG +  V  A++  TG  VA+K +           ST+          REI+
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTL----------REIA 50

Query: 62  IMKIVR---HPNIVRLHEVLA-----SRTKVYIILEFVTG--GELFDKIVHQGRLLENDC 111
           ++K +    HPNIVRL +V          K+ ++ E V         K    G L     
Sbjct: 51  LLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPG-LPPETI 109

Query: 112 RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC- 170
           +   +QL+  V   HS  + HRDLKP+N+L+ S G +K++DFGL+ +     E+  T+  
Sbjct: 110 KDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARI--YSFEMALTSVV 167

Query: 171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVL 203
            T  Y APEVL    Y  +  D+WS G I   L
Sbjct: 168 VTLWYRAPEVLLQSSY-ATPVDMWSVGCIFAEL 199

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score =  105 bits (263), Expect = 4e-26
 Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREI--SIMKIVRHPNIVR 73
           IG G F +V   +  +TG+  AMK L K  I +K      +   I  S++     P IV 
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           +     +  K+  IL+ + GG+L   +   G   E + R Y  ++I  + H H++ V +R
Sbjct: 62  MTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYR 121

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLKP N+LLD +G++++SD GL+    +  +  H + GT  Y+APEVL       S+AD 
Sbjct: 122 DLKPANILLDEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGTAYDSSADW 179

Query: 194 WSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
           +S G +LF L+ G+ PF +    D   + +         P  FS    SL+  +L  +  
Sbjct: 180 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVS 239

Query: 251 TRIRIEG-----IRKHPWFR 265
            R+   G     +++H +F+
Sbjct: 240 KRLGCLGRGAQEVKEHVFFK 259

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  104 bits (260), Expect = 1e-25
 Identities = 61/201 (30%), Positives = 98/201 (48%), Gaps = 17/201 (8%)

Query: 15  RTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +GEG F KV           TGE VA+K L  S   +HR     +REI I++ + H N
Sbjct: 10  KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHR--SDFEREIEILRTLDHEN 67

Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V        + +I+E++  G L D +  H+ ++       +  Q+   + +  S
Sbjct: 68  IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-----YVAPEVLS 182
           +   HRDL   N+L++S   +K+SDFGL+ +  +  +  +     P      + APE L 
Sbjct: 128 QRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKD--YYYVKEPGESPIFWYAPECLR 185

Query: 183 NRGYDGSAADVWSCGVILFVL 203
              +  SA+DVWS GV L+ L
Sbjct: 186 TSKFS-SASDVWSFGVTLYEL 205

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  104 bits (262), Expect = 2e-25
 Identities = 76/302 (25%), Positives = 133/302 (44%), Gaps = 49/302 (16%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKI 65
            +Y+    +G G + +V  A + +TG  VA+K L++   S I   R      RE+ ++K 
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKR----TYRELRLLKH 70

Query: 66  VRHPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           + H N++ L +V      L     VY++   + G +L + IV   +L ++  +    Q++
Sbjct: 71  MDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADL-NNIVKCQKLSDDHIQFLVYQIL 128

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
             + + HS G+ HRDLKP N+ ++    LK+ DFGL+   +   + +     T  Y APE
Sbjct: 129 RGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPE 185

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA 224
           ++ N  +     D+WS G I+  L+ G   F  +D                  L +KI++
Sbjct: 186 IMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS 245

Query: 225 AE---------------FSCPF-WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY 268
                            F   F   +  A  L+ K+L  +P  RI       HP+  + +
Sbjct: 246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYH 305

Query: 269 NP 270
           +P
Sbjct: 306 DP 307

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  103 bits (258), Expect = 3e-25
 Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 12/261 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA+K +      K  +   I  EI +M+  +HP
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKEL---IINEILVMRENKHP 76

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 77  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 135

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q      T  GTP ++APEV++ + Y 
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAY- 192

Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY--KKINAAEFSCPFWFSTGATSLIHKI 244
           G   D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ 
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 252

Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           L+ + + R   + + +HP+ +
Sbjct: 253 LEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score =  102 bits (257), Expect = 5e-25
 Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 34/288 (11%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMK-VLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
             +GEG    V   + + TG   A+K +         +   QI RE+ I K  + P IV+
Sbjct: 7   SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQK---QILRELEINKSCKSPYIVK 63

Query: 74  LHE--VLASRTKVYIILEFVTGGEL---FDKIVHQG-RLLENDCRRYFQQLIDAVAHCHS 127
            +   +  S + + I +E+  GG L   + K+  +G R+ E    +  + ++  +++ HS
Sbjct: 64  YYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + + HRD+KP N+LL   G +K+ DFG+S   +    L  T  GT  Y+APE +  + Y 
Sbjct: 124 RKIIHRDIKPSNILLTRKGQVKLCDFGVSG--ELVNSLAGTFTGTSFYMAPERIQGKPYS 181

Query: 188 GSAADVWSCGVILFVLMAGYLPF---GETDLP---TLYKKINAAEF---SCP----FWFS 234
            + +DVWS G+ L  +     PF   GE  L     L   +N         P     W S
Sbjct: 182 IT-SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKW-S 239

Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLD 282
                 I + L+ +P  R     + +HPW       +K   +++VN+ 
Sbjct: 240 EEFKDFIKQCLEKDPTRRPTPWDMLEHPW-------IKAQMKKKVNMA 280

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|217748 pfam03822, NAF, NAF domain

 Score = 95.7 bits (239), Expect = 7e-25
 Identities = 26/57 (45%), Positives = 41/57 (71%)

Query: 310 MNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVH 366
           +NAF++I+LS GL+L+ LF+  +   K++TRF SR+PA  I+S +E +A+ L  KV 
Sbjct: 1   LNAFDLISLSSGLDLSGLFEEEKKSKKKETRFTSRKPASEIISKLEEIAKELGFKVK 57

Length = 58

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  102 bits (254), Expect = 1e-24
 Identities = 74/261 (28%), Positives = 132/261 (50%), Gaps = 12/261 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA+K +    + K    + I  EI +MK +++P
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQI---NLQKQPKKELIINEILVMKELKNP 76

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   H+  
Sbjct: 77  NIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQIAAVCRECLQALEFLHANQ 135

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q      T  GTP ++APEV++ + Y 
Sbjct: 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAY- 192

Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY--KKINAAEFSCPFWFSTGATSLIHKI 244
           G   D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ 
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRC 252

Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           L+ + + R   + + +HP+ +
Sbjct: 253 LEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score =  101 bits (252), Expect = 2e-24
 Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 3/207 (1%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +GEG++A V    +R  G+ VA+KV++  T  +  +     RE S++K ++H NIV LH+
Sbjct: 13  LGEGSYATVYKGISRINGQLVALKVISMKT--EEGVPFTAIREASLLKGLKHANIVLLHD 70

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
           ++ ++  +  + E++        I H G L   + R +  QL+  +A+ H + + HRDLK
Sbjct: 71  IIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLK 130

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
           P+NLL+   G LK++DFGL+       +   +   T  Y  P+VL       SA D+W  
Sbjct: 131 PQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGA 190

Query: 197 GVILFVLMAGYLPF-GETDLPTLYKKI 222
           G I   ++ G   F G +D+    +KI
Sbjct: 191 GCIFIEMLQGQPAFPGVSDVFEQLEKI 217

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score =  100 bits (250), Expect = 2e-24
 Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 13/194 (6%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---IKREISIMKIVR 67
           YE+ + +G GT+  V  A+N  TGE  A+K      I+K    D    I++EI ++K  +
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVK------IIKLEPGDDFSLIQQEIFMVKECK 64

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           H NIV       SR K++I +E+  GG L D     G L E       ++ +  +A+ HS
Sbjct: 65  HCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHS 124

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS---NR 184
           KG  HRD+K  N+LL   G++K++DFG++A     +    +  GTP ++APEV +   N 
Sbjct: 125 KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNG 184

Query: 185 GYDGSAADVWSCGV 198
           GY+    D+W+ G+
Sbjct: 185 GYN-QLCDIWAVGI 197

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  101 bits (254), Expect = 3e-24
 Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 30/210 (14%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS----TILKHRMVDQIKREISIMK 64
           ++Y+    IG G +  V  A +  +G+ VA+K +  +    T+ K  +     RE+ I++
Sbjct: 5   SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL-----RELKILR 59

Query: 65  IVRHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQ 117
             +H NI+ + ++L  R        VY++++ +   +L   I+H  + L  +  RYF  Q
Sbjct: 60  HFKHDNIIAIRDIL--RPPGADFKDVYVVMDLM-ESDL-HHIIHSDQPLTEEHIRYFLYQ 115

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL------SALPQQGVELLHTTCG 171
           L+  + + HS  V HRDLKP NLL++    L++ DFG+      S    +     +    
Sbjct: 116 LLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVA-- 173

Query: 172 TPNYVAPEVL-SNRGYDGSAADVWSCGVIL 200
           T  Y APE+L S   Y  +A D+WS G I 
Sbjct: 174 TRWYRAPELLLSLPEYT-TAIDMWSVGCIF 202

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  100 bits (251), Expect = 3e-24
 Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 12/261 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA+K +      K  +   I  EI +M+  ++P
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKEL---IINEILVMRENKNP 76

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 77  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALDFLHSNQ 135

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q      T  GTP ++APEV++ + Y 
Sbjct: 136 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAY- 192

Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY--KKINAAEFSCPFWFSTGATSLIHKI 244
           G   D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ 
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRC 252

Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           L+ +   R   + + +HP+ +
Sbjct: 253 LEMDVDRRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 99.2 bits (247), Expect = 3e-24
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 29/254 (11%)

Query: 20  GTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA 79
           G   KV    +  T ++  +K L KS+        + +  I I   V  PN+V LH+ + 
Sbjct: 4   GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTI-IPHCV--PNMVCLHKYIV 55

Query: 80  SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPEN 139
           S   V+++L+   GG+L+  I     + E   +R+  +++ A+   H +G+  RDL P N
Sbjct: 56  SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNN 115

Query: 140 LLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGSAADVWSC 196
           +LLD  G+++++ F       +  E+  +  G      Y APEV      +  A D WS 
Sbjct: 116 ILLDDRGHIQLTYFS------RWSEVEDSCDGEAVENMYCAPEV-GGISEETEACDWWSL 168

Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINA-AEFSCPFWFSTGATSLIHKILDPNPKTRI-- 253
           G ILF L+      G+T +      IN     + P W S  A SL+ ++L  NP  R+  
Sbjct: 169 GAILFELLT-----GKTLVECHPSGINTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA 223

Query: 254 ---RIEGIRKHPWF 264
               +E I+ HP+F
Sbjct: 224 GVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score =  100 bits (250), Expect = 4e-24
 Identities = 77/264 (29%), Positives = 129/264 (48%), Gaps = 17/264 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 6   RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSL 65

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF--QQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I + G    ++ R  F   +L   +     + + +
Sbjct: 66  AYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVY 125

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD  G++++SD GL+    +G E +    GT  Y+APEV++N  Y  S  D
Sbjct: 126 RDLKPENILLDDRGHIRISDLGLAVQIPEG-ETVRGRVGTVGYMAPEVINNEKYTFS-PD 183

Query: 193 VWSCGVILFVLMAGYLPFGETDLPTLYKKI------NAAEFSCPFWFSTGATSLIHKILD 246
            W  G +++ ++ G  PF +       +++      +  E+S    FS  A S+   +L 
Sbjct: 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEK--FSEDAKSICRMLLT 241

Query: 247 PNPKTRIRIEG-----IRKHPWFR 265
            NPK R+   G     +++HP F+
Sbjct: 242 KNPKERLGCRGNGAAGVKQHPIFK 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score =  103 bits (258), Expect = 6e-24
 Identities = 76/237 (32%), Positives = 124/237 (52%), Gaps = 37/237 (15%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R+ +YEV + IG G F +V   +++ T E    K ++    LK R   Q+  E+++M+ +
Sbjct: 11  RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG-LKEREKSQLVIEVNVMREL 69

Query: 67  RHPNIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLID 120
           +H NIVR  +   ++   K+YI++EF   G+L   I       G++ E+      +QL+ 
Sbjct: 70  KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129

Query: 121 AVAHCHS-------KGVYHRDLKPENLLLDS-----------YGNL------KVSDFGLS 156
           A+A+CH+       + V HRDLKP+N+ L +             NL      K+ DFGLS
Sbjct: 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLS 189

Query: 157 ALPQQGVE-LLHTTCGTPNYVAPEVL--SNRGYDGSAADVWSCGVILFVLMAGYLPF 210
                G+E + H+  GTP Y +PE+L    + YD   +D+W+ G I++ L +G  PF
Sbjct: 190 K--NIGIESMAHSCVGTPYYWSPELLLHETKSYD-DKSDMWALGCIIYELCSGKTPF 243

Length = 1021

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score =  102 bits (255), Expect = 7e-24
 Identities = 80/257 (31%), Positives = 118/257 (45%), Gaps = 24/257 (9%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-HRMVDQIKREISIMKIV 66
           V    VGR      F   R       G     KV+AK  +L   R     + E+  +   
Sbjct: 70  VLTTLVGRNPTTAAFVATR-------GSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC 122

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAV 122
            H  IV+  +   S  K+ +I+E+ +GG+L  +I  + +      E +    F Q++ A+
Sbjct: 123 DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLAL 182

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL--LHTTCGTPNYVAPEV 180
              HS+ + HRDLK  N+ L   G +K+ DFG S      V L    + CGTP Y+APE+
Sbjct: 183 DEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPEL 242

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFG-----ETDLPTLYKKINAAEFSCPFWFST 235
              + Y    AD+WS GVIL+ L+  + PF      E     LY K +   F CP   S+
Sbjct: 243 WERKRYS-KKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP--FPCP--VSS 297

Query: 236 GATSLIHKILDPNPKTR 252
           G  +L+  +L  NP  R
Sbjct: 298 GMKALLDPLLSKNPALR 314

Length = 478

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 98.5 bits (245), Expect = 2e-23
 Identities = 64/196 (32%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V   Q + TG+  A K L K  + K         E  I++ V  P IV L  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAY 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQG-RLLE-NDCRRYFQQLIDAVAHCHSKGVYHRD 134
              S+T + +++  + GG+L   I + G R LE      Y  Q+   + H HS  + +RD
Sbjct: 61  AFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +KPEN+LLD  GN ++SD GL A+  +  + +    GT  Y+APE+L    Y     D +
Sbjct: 121 MKPENVLLDDQGNCRLSDLGL-AVELKDGKTITQRAGTNGYMAPEILKEEPYSYP-VDWF 178

Query: 195 SCGVILFVLMAGYLPF 210
           + G  ++ ++AG  PF
Sbjct: 179 AMGCSIYEMVAGRTPF 194

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 98.2 bits (244), Expect = 2e-23
 Identities = 68/254 (26%), Positives = 124/254 (48%), Gaps = 9/254 (3%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++          ++ I++EI+++     P + + + 
Sbjct: 12  IGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYG 69

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G   E       ++++  + + HS+   HRD+K
Sbjct: 70  SYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 128

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL   G++K++DFG++          +T  GTP ++APEV+    YD S AD+WS 
Sbjct: 129 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD-SKADIWSL 187

Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW---FSTGATSLIHKILDPNPKTRI 253
           G+    L  G  P   +D+  +       + + P     FS      I   L+ +P  R 
Sbjct: 188 GITAIELAKGEPP--NSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRP 245

Query: 254 RIEGIRKHPWFRKN 267
             + + KH +  KN
Sbjct: 246 TAKELLKHKFIVKN 259

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 97.9 bits (243), Expect = 3e-23
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      K  +   I  EI +M+  ++P
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q      T  GTP ++APEV++ + Y 
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAY- 193

Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY--KKINAAEFSCPFWFSTGATSLIHKI 244
           G   D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ 
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253

Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           LD + + R   + + +H + +
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 97.5 bits (242), Expect = 5e-23
 Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 51/295 (17%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ------IKREISIMK 64
           YE    +GEG++A V   +++  G+ VA+KV+        R+ ++        RE S++K
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVI--------RLQEEEGTPFTAIREASLLK 58

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAV 122
            ++H NIV LH+++ ++  + ++ E+V     +  DK  H G L   + + +  QL+  +
Sbjct: 59  GLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDK--HPGGLHPENVKLFLFQLLRGL 116

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           ++ H + + HRDLKP+NLL+   G LK++DFGL+               T  Y  P+VL 
Sbjct: 117 SYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLL 176

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF--------------------------GETDLP 216
                 +  D+W  G I   ++ G   F                          G   LP
Sbjct: 177 GSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236

Query: 217 -------TLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
                  TLY   N  +      +   A  L  K+L   PK R+  +    H +F
Sbjct: 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 96.7 bits (241), Expect = 5e-23
 Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + + R +G G F +V +    +    VA+K+L    +LK +     ++E+  +K +RH +
Sbjct: 8   FTLERKLGSGYFGEV-WEGLWKNRVRVAIKILKSDDLLKQQD---FQKEVQALKRLRHKH 63

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQ-QLIDAVAHCHSK 128
           ++ L  V +    VYII E +  G L   +   +G++L          Q+ + +A+   +
Sbjct: 64  LISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ 123

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
              HRDL   N+L+      KV+DFGL+ L ++ V L         + APE  S+  +  
Sbjct: 124 NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFS- 182

Query: 189 SAADVWSCGVILFVLMA-GYLPF 210
           + +DVWS G++L+ +   G +P+
Sbjct: 183 TKSDVWSFGILLYEMFTYGQVPY 205

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 96.7 bits (240), Expect = 7e-23
 Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 4/196 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++          ++ I++EI+++     P + + + 
Sbjct: 12  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYG 69

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 70  SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 128

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL  +G +K++DFG++          +T  GTP ++APEV+    YD S AD+WS 
Sbjct: 129 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD-SKADIWSL 187

Query: 197 GVILFVLMAGYLPFGE 212
           G+    L  G  P  E
Sbjct: 188 GITAIELAKGEPPHSE 203

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 95.9 bits (239), Expect = 7e-23
 Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 14/192 (7%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           ++G TIG+G F  V     R  G+ VA+K L   +            E S+M  +RHPN+
Sbjct: 9   KLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNL 62

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQ-QLIDAVAHCHSKG 129
           V+L  V+     +YI+ E++  G L D +  +GR ++    +  F   + + + +   K 
Sbjct: 63  VQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN 122

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDG 188
             HRDL   N+L+      KVSDFGL+    QG      +   P  + APE L  + +  
Sbjct: 123 FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG----QDSGKLPVKWTAPEALREKKFS- 177

Query: 189 SAADVWSCGVIL 200
           + +DVWS G++L
Sbjct: 178 TKSDVWSFGILL 189

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 96.3 bits (239), Expect = 9e-23
 Identities = 68/252 (26%), Positives = 121/252 (48%), Gaps = 17/252 (6%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T E VA+K++          ++ I++EI+++     P I R + 
Sbjct: 12  IGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYG 69

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 70  SYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 128

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL   G++K++DFG++          +T  GTP ++APEV+    YD   AD+WS 
Sbjct: 129 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD-FKADIWSL 187

Query: 197 GVILFVLMAGYLPFGETD-------LPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
           G+    L  G  P  +         +P         ++S PF         +   L+ +P
Sbjct: 188 GITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPF------KEFVEACLNKDP 241

Query: 250 KTRIRIEGIRKH 261
           + R   + + KH
Sbjct: 242 RFRPTAKELLKH 253

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 99.2 bits (247), Expect = 1e-22
 Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 17/258 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY + R +G G    V  A+    GE  A+KV+     +     ++ + E+  +      
Sbjct: 33  KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEG-MSEADKNRAQAEVCCLLNCDFF 91

Query: 70  NIVRLHEVLASRTK--------VYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQ 117
           +IV+ HE  A +          + ++L++   G+L  +I  + +      E++    F Q
Sbjct: 92  SIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQ 151

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNY 175
           ++ AV H HSK + HRD+K  N+LL S G +K+ DFG S +    V  ++  T CGTP Y
Sbjct: 152 VLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYY 211

Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFS 234
           VAPE+   + Y    AD++S GV+L+ L+    PF   ++  +  K  A  +   P   S
Sbjct: 212 VAPEIWRRKPYS-KKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSIS 270

Query: 235 TGATSLIHKILDPNPKTR 252
                ++  +L  +PK R
Sbjct: 271 PEMQEIVTALLSSDPKRR 288

Length = 496

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 95.9 bits (239), Expect = 1e-22
 Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 61/294 (20%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVL-------AKSTILKHRMVDQIKREISIMKIVRHP 69
           +GEG++A V   +++ TG+ VA+K +       A  T +         RE S++K ++H 
Sbjct: 13  LGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAI---------REASLLKDLKHA 63

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSK 128
           NIV LH+++ ++  + ++ E++   +L   +   G  L  ++ R +  QL+  +A+CH +
Sbjct: 64  NIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGV--ELLHTTCGTPNYVAPEVLSN 183
            V HRDLKP+NLL+   G LK++DFGL+   ++P +    E++     T  Y  P+VL  
Sbjct: 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVV-----TLWYRPPDVLLG 177

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDL-------------------PTLYKKIN 223
                ++ D+W  G I + +  G   F G TD+                   P +     
Sbjct: 178 STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237

Query: 224 AAEFSCPFW-------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
              +S PF+                    L  K L   PK RI      KHP+F
Sbjct: 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 95.8 bits (238), Expect = 2e-22
 Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 20/217 (9%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HP 69
           +E+  TIG+GT+ KV    N++ G   A+K+L       H + ++I+ E +I+K +  HP
Sbjct: 20  WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI----HDIDEEIEAEYNILKALSDHP 75

Query: 70  NIVRLHEVLASRTKV-----YIILEFVTGGELFDKI---VHQGRLLENDCRRY-FQQLID 120
           N+V+ + +   +        +++LE   GG + D +   + +G  +E     Y   + + 
Sbjct: 76  NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALM 135

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
            + H H     HRD+K  N+LL + G +K+ DFG+SA         +T+ GTP ++APEV
Sbjct: 136 GLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEV 195

Query: 181 LS-----NRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
           ++     +  YD +  DVWS G+    L  G  P  +
Sbjct: 196 IACEQQLDSTYD-ARCDVWSLGITAIELGDGDPPLAD 231

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 98.4 bits (245), Expect = 2e-22
 Identities = 45/140 (32%), Positives = 81/140 (57%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           I  G F KV   + +   +  A+KV+ K+ ++   MV Q++ E   + + + P IV L+ 
Sbjct: 12  ISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYY 71

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
            L S   VY+++E++ GG++   +   G   E    +Y  ++  A+ + H  G+ HRDLK
Sbjct: 72  SLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLK 131

Query: 137 PENLLLDSYGNLKVSDFGLS 156
           P+N+L+ + G++K++DFGLS
Sbjct: 132 PDNMLISNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 95.6 bits (238), Expect = 3e-22
 Identities = 59/189 (31%), Positives = 99/189 (52%), Gaps = 12/189 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R IG G+F  V FA++  T E VA+K ++ S    +     I +E+  ++ +RHPN +  
Sbjct: 21  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEY 80

Query: 75  HEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
                     ++++E+  G   ++ +  VH+  L E +        +  +A+ HS    H
Sbjct: 81  KGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLHSHERIH 138

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL--SNRG-YDGS 189
           RD+K  N+LL   G +K++DFG ++L    V   ++  GTP ++APEV+   + G YDG 
Sbjct: 139 RDIKAGNILLTEPGTVKLADFGSASL----VSPANSFVGTPYWMAPEVILAMDEGQYDGK 194

Query: 190 AADVWSCGV 198
             DVWS G+
Sbjct: 195 -VDVWSLGI 202

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 94.7 bits (235), Expect = 4e-22
 Identities = 69/226 (30%), Positives = 120/226 (53%), Gaps = 21/226 (9%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHP 69
           +E+  TIG+GT+ KV    N++ G   A+K+L   +     + ++I+ E +I++ +  HP
Sbjct: 24  WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHP 79

Query: 70  NIVRLHEVLASRTK-----VYIILEFVTGG---ELFDKIVHQGRLLENDCRRY--FQQLI 119
           N+V+ + +     K     ++++LE   GG   EL   ++  G+ L+     Y  +  L+
Sbjct: 80  NVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALL 139

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
             + H H+  + HRD+K  N+LL + G +K+ DFG+SA         +T+ GTP ++APE
Sbjct: 140 -GLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPE 198

Query: 180 VLS-NRGYDGS---AADVWSCGVILFVLMAGYLPFGETD-LPTLYK 220
           V++  + YD S     DVWS G+    L  G  P  +   + TL+K
Sbjct: 199 VIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 95.3 bits (237), Expect = 5e-22
 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 27/208 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIV 66
           +Y   + +G G F  V  A+++ TG++VA+K + K   + +L  R      RE+ ++K +
Sbjct: 11  RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTY----RELKLLKHL 66

Query: 67  RHPNIVRLHEVLAS-RTKVYIILEFVTGGELFDKIVH---QGRLLENDCRRYFQ-QLIDA 121
           RH NI+ L ++  S    +Y    FVT  EL    +H     R LE    +YF  Q++  
Sbjct: 67  RHENIISLSDIFISPLEDIY----FVT--ELLGTDLHRLLTSRPLEKQFIQYFLYQILRG 120

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPE 179
           + + HS GV HRDLKP N+L++   +LK+ DFGL A  Q        T    T  Y APE
Sbjct: 121 LKYVHSAGVVHRDLKPSNILINENCDLKICDFGL-ARIQDP----QMTGYVSTRYYRAPE 175

Query: 180 V-LSNRGYDGSAADVWSCGVILFVLMAG 206
           + L+ + YD    D+WS G I   ++ G
Sbjct: 176 IMLTWQKYD-VEVDIWSAGCIFAEMLEG 202

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 93.5 bits (232), Expect = 1e-21
 Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 8/193 (4%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRHPNIVRL 74
           +GEGT+A V   +++ T   VA+K +     L+H         RE+S++K ++H NIV L
Sbjct: 13  LGEGTYATVFKGRSKLTENLVALKEIR----LEHEEGAPCTAIREVSLLKNLKHANIVTL 68

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHR 133
           H+++ +   + ++ E++   +L   + + G L+  ++ + +  QL+  +++CH + + HR
Sbjct: 69  HDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHR 127

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLKP+NLL++  G LK++DFGL+       +       T  Y  P+VL       +  D+
Sbjct: 128 DLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDM 187

Query: 194 WSCGVILFVLMAG 206
           W  G IL+ +  G
Sbjct: 188 WGVGCILYEMATG 200

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 94.0 bits (234), Expect = 1e-21
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 25/213 (11%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRET--GESVAMK----VLAKSTILKHRMVDQIKREISIMK 64
           YE+ + +G+G +  V  A+N ET   E+VA+K    V +K  + K  +     RE+ +++
Sbjct: 2   YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRAL-----RELKLLR 56

Query: 65  IVR-HPNIVRLHEV----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQL 118
             R H NI  L+++      +  ++Y+  E +       +I+  G+ L +   + F  Q+
Sbjct: 57  HFRGHKNITCLYDMDIVFPGNFNELYLYEELMEAD--LHQIIRSGQPLTDAHFQSFIYQI 114

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL----SALPQQGVELLHTTCGTPN 174
           +  + + HS  V HRDLKP NLL+++   LK+ DFGL    S  P +    +     T  
Sbjct: 115 LCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRW 174

Query: 175 YVAPEV-LSNRGYDGSAADVWSCGVILFVLMAG 206
           Y APE+ LS + Y   A DVWS G IL  L+  
Sbjct: 175 YRAPEIMLSFQSYT-KAIDVWSVGCILAELLGR 206

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 93.1 bits (231), Expect = 2e-21
 Identities = 59/198 (29%), Positives = 105/198 (53%), Gaps = 18/198 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRHPNIVRL 74
           +GEGT+A V   +++ T   VA+K +     L+H         RE+S++K ++H NIV L
Sbjct: 14  LGEGTYATVFKGRSKLTENLVALKEIR----LEHEEGAPCTAIREVSLLKDLKHANIVTL 69

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQ-----GRLLE-NDCRRYFQQLIDAVAHCHSK 128
           H+++ +   + ++ E++      DK + Q     G ++  ++ + +  Q++  +A+CH +
Sbjct: 70  HDIVHTDKSLTLVFEYL------DKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V HRDLKP+NLL++  G LK++DFGL+       +       T  Y  P+VL       
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYS 183

Query: 189 SAADVWSCGVILFVLMAG 206
           +  D+W  G I F + +G
Sbjct: 184 TQIDMWGVGCIFFEMASG 201

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 92.4 bits (229), Expect = 2e-21
 Identities = 60/214 (28%), Positives = 114/214 (53%), Gaps = 19/214 (8%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHP 69
           +E+   +G GT+ +V   ++ +TG+  A+KV+     +     ++IK EI+++K    H 
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTEDEEEEIKLEINMLKKYSHHR 73

Query: 70  NIVRLHEVLASRT------KVYIILEFVTGGELFDKIVH-QGRLLENDCRRYF-QQLIDA 121
           NI   +     ++      ++++++EF   G + D + + +G  L+ D   Y  ++++  
Sbjct: 74  NIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG 133

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +AH H+  V HRD+K +N+LL     +K+ DFG+SA   + V   +T  GTP ++APEV+
Sbjct: 134 LAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 193

Query: 182 S-----NRGYDGSAADVWSCGVILFVLMAGYLPF 210
           +     +  YD   +D+WS G+    +  G  P 
Sbjct: 194 ACDENPDATYD-YRSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 93.7 bits (233), Expect = 2e-21
 Identities = 87/336 (25%), Positives = 137/336 (40%), Gaps = 64/336 (19%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMK--VLAKSTILKHRMVDQIKREISIMKIV 66
           ++Y   R +G G+   V  A + +  + VA+K  VL     +KH +     REI I++ +
Sbjct: 5   SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHAL-----REIKIIRRL 59

Query: 67  RHPNIVRLHEVLASRTK--------------VYIILEFVTGGELFDKIVHQGRLLENDCR 112
            H NIV+++EVL                   VYI+ E++        ++ QG L E   R
Sbjct: 60  DHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETD--LANVLEQGPLSEEHAR 117

Query: 113 RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQGVE---LLHT 168
            +  QL+  + + HS  V HRDLKP N+ +++    LK+ DFGL+ +          L  
Sbjct: 118 LFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSE 177

Query: 169 TCGTPNYVAPE-VLSNRGYDGSAADVWSCGVILFVLMAGYLPFG---------------- 211
              T  Y +P  +LS   Y   A D+W+ G I   ++ G   F                 
Sbjct: 178 GLVTKWYRSPRLLLSPNNYT-KAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236

Query: 212 ---ETDLPTLYKKI------NAAEFSCPFW-----FSTGATSLIHKILDPNPKTRIRIEG 257
              E D   L   I      +  E   P        +  A   + +IL  NP  R+  E 
Sbjct: 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEE 296

Query: 258 IRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIED 293
              HP+         C  +E V+L   H + D+++D
Sbjct: 297 ALMHPYMS----CYSCPFDEPVSLHPFH-IEDELDD 327

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 91.8 bits (228), Expect = 3e-21
 Identities = 73/251 (29%), Positives = 117/251 (46%), Gaps = 25/251 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+GT+  V  A++  T   +A+K +        R V  +  EI++   ++H NIV+   
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIP---ERDSRYVQPLHEEIALHSYLKHRNIVQYLG 72

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQ-GRLL--ENDCRRYFQQLIDAVAHCHSKGVYHR 133
             +      I +E V GG L   +  + G L   E     Y +Q+++ + + H   + HR
Sbjct: 73  SDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHR 132

Query: 134 DLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSA 190
           D+K +N+L+++Y G +K+SDFG S           T  GT  Y+APEV+    RGY G+ 
Sbjct: 133 DIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGY-GAP 191

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW---------FSTGATSLI 241
           AD+WS G  +  +  G  PF E   P       AA F    +          S  A + I
Sbjct: 192 ADIWSLGCTIVEMATGKPPFIELGEP------QAAMFKVGMFKIHPEIPESLSAEAKNFI 245

Query: 242 HKILDPNPKTR 252
            +  +P+P  R
Sbjct: 246 LRCFEPDPDKR 256

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 91.8 bits (228), Expect = 4e-21
 Identities = 69/272 (25%), Positives = 122/272 (44%), Gaps = 17/272 (6%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           EV   +G+G +  V    +R TG ++AMK +     L     +QI  E+ I+     P I
Sbjct: 4   EVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYI 61

Query: 72  VRLHEVLASRTKVYIILEFVTGG---ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           V  +        VY+ +E++  G   +L+   V    + E+  RR    ++  +     +
Sbjct: 62  VDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE 121

Query: 129 -GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HRD+KP N+L++  G +K+ DFG+S        L  T  G  +Y+APE + + G +
Sbjct: 122 HNIIHRDVKPTNVLVNGNGQVKLCDFGVSG--NLVASLAKTNIGCQSYMAPERIKSGGPN 179

Query: 188 GSA-----ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA----AEFSCPFWFSTGAT 238
            +      +DVWS G+ +  +  G  P+       ++ +++A       + P  +S  A 
Sbjct: 180 QNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQ 239

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             + K L+  P  R     + +HPW  K  N 
Sbjct: 240 DFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 90.8 bits (225), Expect = 5e-21
 Identities = 64/206 (31%), Positives = 108/206 (52%), Gaps = 15/206 (7%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + K  +G  IGEG F  V   Q   TG+ VA+K + K  +     ++    E ++M  + 
Sbjct: 5   LQKLTLGEIIGEGEFGAV--LQGEYTGQKVAVKNI-KCDVTAQAFLE----ETAVMTKLH 57

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR--RYFQQLIDAVAHC 125
           H N+VRL  V+     +YI++E ++ G L + +  +GR L +  +  ++   + + + + 
Sbjct: 58  HKNLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL 116

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
            SK + HRDL   N+L+   G  KVSDFGL+ +   GV+    +     + APE L ++ 
Sbjct: 117 ESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD---NSKLPVKWTAPEALKHKK 173

Query: 186 YDGSAADVWSCGVILF-VLMAGYLPF 210
           +  S +DVWS GV+L+ V   G  P+
Sbjct: 174 FS-SKSDVWSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 91.7 bits (228), Expect = 8e-21
 Identities = 77/317 (24%), Positives = 123/317 (38%), Gaps = 60/317 (18%)

Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-----------REIS 61
            G  +GEGT+ KV  A +  TG+ VA+K +    I      D+             RE+ 
Sbjct: 13  KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELK 72

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYFQQLI 119
           IM  ++H NI+ L +V      + ++++ +     ++ D+ +   RL E+  +    Q++
Sbjct: 73  IMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI---RLTESQVKCILLQIL 129

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGVEL--LHTTCGTPN 174
           + +   H     HRDL P N+ ++S G  K++DFGL+     P     L    T      
Sbjct: 130 NGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREE 189

Query: 175 ---------YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD----------- 214
                    Y APE+L        A D+WS G I   L+ G   F   +           
Sbjct: 190 MTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFEL 249

Query: 215 --------------LP--TLYKKINAAEFSCPFWF-STGATSLIHKILDPNPKTRIRIEG 257
                         LP  T +      +    F   S  A  L+  +L  NP  RI  + 
Sbjct: 250 LGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKE 309

Query: 258 IRKHPWFRKNYNPVKCS 274
             KH +F    +P+ C 
Sbjct: 310 ALKHEYF--KSDPLPCD 324

Length = 335

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 90.9 bits (225), Expect = 1e-20
 Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 22/258 (8%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R IG G+F  V FA++  T E VA+K ++ S    +     I +E+  ++ ++HPN +  
Sbjct: 31  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEY 90

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                     ++++E+  G       VH+  L E +        +  +A+ HS  + HRD
Sbjct: 91  KGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRD 150

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV---LSNRGYDGSAA 191
           +K  N+LL   G +K++DFG +++        ++  GTP ++APEV   +    YDG   
Sbjct: 151 IKAGNILLTEPGQVKLADFGSASI----ASPANSFVGTPYWMAPEVILAMDEGQYDGK-V 205

Query: 192 DVWSCGVILFVLMAGYLP-FGETDLPTLYK-------KINAAEFSCPFWFSTGATSLIHK 243
           DVWS G+    L     P F    +  LY         + + E+S   +F     S + K
Sbjct: 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSD--YFRNFVDSCLQK 263

Query: 244 ILDPNPKTRIRIEGIRKH 261
           I    P+ R   E + KH
Sbjct: 264 I----PQDRPTSEELLKH 277

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 89.4 bits (222), Expect = 1e-20
 Identities = 64/196 (32%), Positives = 94/196 (47%), Gaps = 19/196 (9%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR----EISIMKIVRHPN 70
             IG+G F  V +    +    VA+K   +ST     +   +KR    E  I+K   HPN
Sbjct: 1   EKIGKGNFGDV-YKGVLKGNTEVAVKT-CRST-----LPPDLKRKFLQEAEILKQYDHPN 53

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA---HCHS 127
           IV+L  V   +  +YI++E V GG L   +  +   L    ++  Q  +DA A   +  S
Sbjct: 54  IVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLT--VKKLLQMSLDAAAGMEYLES 111

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRG 185
           K   HRDL   N L+     LK+SDFG+S   + G+  +       P  + APE L N G
Sbjct: 112 KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEAL-NYG 170

Query: 186 YDGSAADVWSCGVILF 201
              S +DVWS G++L+
Sbjct: 171 RYTSESDVWSYGILLW 186

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 90.4 bits (224), Expect = 1e-20
 Identities = 57/198 (28%), Positives = 102/198 (51%), Gaps = 18/198 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRHPNIVRL 74
           +GEGT+A V   +++ T   VA+K +     L+H         RE+S++K ++H NIV L
Sbjct: 14  LGEGTYATVYKGRSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDLKHANIVTL 69

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQ-----GRLLE-NDCRRYFQQLIDAVAHCHSK 128
           H+++ +   + ++ E++      DK + Q     G  +  ++ + +  QL+  + +CH +
Sbjct: 70  HDIIHTEKSLTLVFEYL------DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V HRDLKP+NLL++  G LK++DFGL+       +       T  Y  P++L       
Sbjct: 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYS 183

Query: 189 SAADVWSCGVILFVLMAG 206
           +  D+W  G I + +  G
Sbjct: 184 TQIDMWGVGCIFYEMSTG 201

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 90.6 bits (225), Expect = 2e-20
 Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 15/208 (7%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVR 67
           +Y++   IG+G++  V  A +  TGE VA+K +  + + +H + D  +I REI +++++R
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI--NDVFEH-VSDATRILREIKLLRLLR 57

Query: 68  HPNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           HP+IV +  ++   ++     +Y++ E +   +L   I     L     + +  QL+ A+
Sbjct: 58  HPDIVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRAL 116

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTT-CGTPNYVAPE 179
            + H+  V+HRDLKP+N+L ++   LK+ DFGL+  A       +  T    T  Y APE
Sbjct: 117 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 176

Query: 180 VL-SNRGYDGSAADVWSCGVILFVLMAG 206
           +  S       A D+WS G I   ++ G
Sbjct: 177 LCGSFFSKYTPAIDIWSIGCIFAEVLTG 204

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 90.5 bits (225), Expect = 3e-20
 Identities = 70/218 (32%), Positives = 108/218 (49%), Gaps = 26/218 (11%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR---EISIMKIV 66
           +Y+  + IG G    V  A +  TG++VA+K L++      + V   KR   E+ +MK+V
Sbjct: 17  RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRP----FQNVTHAKRAYRELVLMKLV 72

Query: 67  RHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQ--GRLLENDCRRYF-QQ 117
            H NI+ L  V   +        VY+++E      L D  + Q     L+++   Y   Q
Sbjct: 73  NHKNIIGLLNVFTPQKSLEEFQDVYLVME------LMDANLCQVIQMDLDHERMSYLLYQ 126

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYV 176
           ++  + H HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y 
Sbjct: 127 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 184

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           APEV+   GY     D+WS G I+  ++ G + F  TD
Sbjct: 185 APEVILGMGYK-ENVDIWSVGCIMGEMIRGTVLFPGTD 221

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 88.4 bits (219), Expect = 4e-20
 Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 16/223 (7%)

Query: 11  YEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++M
Sbjct: 1   WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVM 56

Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLIDA 121
           K ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  A
Sbjct: 57  KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 116

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEV 180
           + +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE 
Sbjct: 117 MEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 176

Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
           L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+ +
Sbjct: 177 LAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 218

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|213380 cd12195, CIPK_C, C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases

 Score = 84.5 bits (210), Expect = 4e-20
 Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)

Query: 311 NAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRN- 369
           NAF++I+LS GL+L+ LF+  +D VKR+TRF SR+PA+ I+  +E  A+ L  +V  +  
Sbjct: 1   NAFDLISLSSGLDLSGLFEE-EDEVKRETRFTSRKPAEEIIEKLEEAAKKLGFRVRKKKE 59

Query: 370 YKVCL 374
             V L
Sbjct: 60  GGVKL 64

CIPKs are serine/threonine protein kinases (STKs), catalyzing the transfer of the gamma-phosphoryl group from ATP to S/T residues on protein substrates. They comprise a unique family in higher plants of proteins that interact with the calcineurin B-like (CBL) calcium sensors to form a signaling network that decode specific calcium signals triggered by a variety of environmental stimuli including salinity, drought, cold, light, and mechanical perturbation, among others. The specificity of the response relies on differences in expression and localization of both CBLs and CIPKs, as well as on the interaction specificity of CBL-CIPK combinations. There are 25, 30, and 43 CIPK genes identified in the Arabidopsis thaliana, Oryza sativa, and Zea mays genomes, respectively. The founding member of the CIPK family is Arabidopsis thaliana CIPK24, also called SOS2 (Salt Overlay Sensitive 2). CIPKs contain an N-terminal catalytic kinase domain and a C-terminal regulatory domain that contains the FISL (also called NAF for Asn-Ala-Phe) and PPI-binding motifs, which are involved in the interaction with CBLs and PP2C-type protein phosphatases, respectively. Studies using SOS2, SOS3, and ABI2 phosphatase show that the binding of CBL and PP2C-type protein phosphatase to CIPK is mutually exclusive. The binding of CBL to CIPK is inhibitory to kinase activity. Length = 116

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 89.3 bits (221), Expect = 5e-20
 Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 20/217 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G+F  V FA N  T E VA+K ++ S    +     I +E+  ++ ++HPN +    
Sbjct: 29  IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                   ++++E+  G       VH+  L E +        +  +A+ HS  + HRD+K
Sbjct: 89  CYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK 148

Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV---LSNRGYDGSAADV 193
             N+LL   G +K++DFG ++         ++  GTP ++APEV   +    YDG   DV
Sbjct: 149 AGNILLTEPGQVKLADFGSASKSSPA----NSFVGTPYWMAPEVILAMDEGQYDGK-VDV 203

Query: 194 WSCGVILFVL------------MAGYLPFGETDLPTL 218
           WS G+    L            M+      + D PTL
Sbjct: 204 WSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTL 240

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 88.9 bits (220), Expect = 5e-20
 Identities = 65/201 (32%), Positives = 100/201 (49%), Gaps = 14/201 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-- 67
           +YE    IG G +  V  A++  +G  VA+K +   T      +  + RE++++K +   
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTV-REVALLKRLEAF 59

Query: 68  -HPNIVRLHEVLAS-----RTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLI 119
            HPNIVRL +V A+      TKV ++ E V        DK+   G   E   +   +Q +
Sbjct: 60  DHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAET-IKDLMRQFL 118

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
             +   H+  + HRDLKPEN+L+ S G +K++DFGL+ +    + L      T  Y APE
Sbjct: 119 RGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVV-TLWYRAPE 177

Query: 180 VLSNRGYDGSAADVWSCGVIL 200
           VL    Y  +  D+WS G I 
Sbjct: 178 VLLQSTY-ATPVDMWSVGCIF 197

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 87.0 bits (216), Expect = 1e-19
 Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 27/211 (12%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + IG G F +V   R     +    VA+K L   +  K R       E SIM    HPNI
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQR--LDFLTEASIMGQFDHPNI 67

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVAH 124
           +RL  V+     V II E++  G L DK      L END +    QL+         + +
Sbjct: 68  IRLEGVVTKSRPVMIITEYMENGSL-DKF-----LRENDGKFTVGQLVGMLRGIASGMKY 121

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG--TP-NYVAPEVL 181
                  HRDL   N+L++S    KVSDFGLS    +  E  +TT G   P  + APE +
Sbjct: 122 LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRR-LEDSEATYTTKGGKIPIRWTAPEAI 180

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
           + R +  SA+DVWS G++++ +M+    +GE
Sbjct: 181 AYRKFT-SASDVWSFGIVMWEVMS----YGE 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 87.1 bits (215), Expect = 2e-19
 Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 25/271 (9%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHP 69
           +E+   +G GT+ +V   ++ +TG+  A+KV+  +   +    ++IK+EI+++K    H 
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHR 63

Query: 70  NIVRLHEVLASRT------KVYIILEFVTGGELFDKIVH-QGRLLENDCRRYF-QQLIDA 121
           NI   +     +       ++++++EF   G + D I + +G  L+ +   Y  ++++  
Sbjct: 64  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 123

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           ++H H   V HRD+K +N+LL     +K+ DFG+SA   + V   +T  GTP ++APEV+
Sbjct: 124 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 183

Query: 182 S-----NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT----LYKKINAAEFSCPFW 232
           +     +  YD   +D+WS G+    +  G  P  +   P     L  +  A       W
Sbjct: 184 ACDENPDATYD-FKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKW 241

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPW 263
            S    S I   L  N   R   E + KHP+
Sbjct: 242 -SKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 87.4 bits (216), Expect = 2e-19
 Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 8/187 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R IG G+F  V FA++    E VA+K ++ S    +     I +E+  ++ +RHPN ++ 
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                     ++++E+  G       VH+  L E +        +  +A+ HS  + HRD
Sbjct: 81  RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV---LSNRGYDGSAA 191
           +K  N+LL   G +K+ DFG +++    +   +   GTP ++APEV   +    YDG   
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASI----MAPANXFVGTPYWMAPEVILAMDEGQYDGK-V 195

Query: 192 DVWSCGV 198
           DVWS G+
Sbjct: 196 DVWSLGI 202

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 86.2 bits (213), Expect = 2e-19
 Identities = 64/192 (33%), Positives = 95/192 (49%), Gaps = 14/192 (7%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G F +V   + R     VA+K   ++  L   +  +  +E  I+K   HPNIVRL  
Sbjct: 3   IGRGNFGEVFSGRLRADNTPVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIG 60

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA---HCHSKGVYHR 133
           V   +  +YI++E V GG+    +  +G  L+   +   Q + +A A   +  SK   HR
Sbjct: 61  VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLK--VKELIQMVENAAAGMEYLESKHCIHR 118

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN----YVAPEVLSNRGYDGS 189
           DL   N L+     LK+SDFG+S   + GV    +T G       + APE L N G   S
Sbjct: 119 DLAARNCLVTEKNVLKISDFGMSREEEDGV--YASTGGMKQIPVKWTAPEAL-NYGRYSS 175

Query: 190 AADVWSCGVILF 201
            +DVWS G++L+
Sbjct: 176 ESDVWSFGILLW 187

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 86.1 bits (213), Expect = 4e-19
 Identities = 66/212 (31%), Positives = 101/212 (47%), Gaps = 23/212 (10%)

Query: 15  RTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + IG G F +V   + +  G+    VA+K L      K R       E SIM    HPNI
Sbjct: 10  KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRR--DFLSEASIMGQFDHPNI 67

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI-------DAVAH 124
           + L  V+     V I+ E++  G L         L ++D +    QL+         + +
Sbjct: 68  IHLEGVVTKSKPVMIVTEYMENGSL------DAFLRKHDGQFTVIQLVGMLRGIASGMKY 121

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVL 181
               G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + APE +
Sbjct: 122 LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 181

Query: 182 SNRGYDGSAADVWSCGVILFVLMA-GYLPFGE 212
           + R +  SA+DVWS G++++ +M+ G  P+ E
Sbjct: 182 AYRKFT-SASDVWSYGIVMWEVMSYGERPYWE 212

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 85.5 bits (212), Expect = 4e-19
 Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 32/202 (15%)

Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +   G+   VA+K L KS  L   M D + +E +IM  + H N++R
Sbjct: 3   LGDGSFGVVRRGEWSTSGGKVIPVAVKCL-KSDKLSDIMDDFL-KEAAIMHSLDHENLIR 60

Query: 74  LHEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           L+ V+ +   + ++ E    G L D  +    G  L +    Y  Q+ + + +  SK   
Sbjct: 61  LYGVVLTH-PLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFI 119

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYV------------AP 178
           HRDL   N+LL S   +K+ DFGL  ALPQ             +YV            AP
Sbjct: 120 HRDLAARNILLASDDKVKIGDFGLMRALPQ----------NEDHYVMEEHLKVPFAWCAP 169

Query: 179 EVLSNRGYDGSAADVWSCGVIL 200
           E L  R +   A+DVW  GV L
Sbjct: 170 ESLRTRTFS-HASDVWMFGVTL 190

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 85.3 bits (212), Expect = 6e-19
 Identities = 65/258 (25%), Positives = 121/258 (46%), Gaps = 30/258 (11%)

Query: 19  EGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEV 77
           +G F KV   +++ T      K+  +  I K +  + I  E  + ++++ +PN ++L+  
Sbjct: 26  DGKFGKVSVLKHKPT-----QKLFVQKII-KAKNFNAI--EPMVHQLMKDNPNFIKLYYS 77

Query: 78  LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKP 137
           + +     +I++++  G+LFD +  +G+L E + ++  +QL++A+   H   + H D+K 
Sbjct: 78  VTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKL 137

Query: 138 ENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
           EN+L D     + + D+GL  +   G    +   GT +Y +PE +    YD S  D W+ 
Sbjct: 138 ENVLYDRAKDRIYLCDYGLCKI--IGTPSCYD--GTLDYFSPEKIKGHNYDVS-FDWWAV 192

Query: 197 GVILFVLMAGYLPFGETD---------LPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           GV+ + L+ G  PF E +         L    KK+   +       S  A   +  +L  
Sbjct: 193 GVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNV-----SKNANDFVQSMLKY 247

Query: 248 NPKTR-IRIEGIRKHPWF 264
           N   R      I KHP+ 
Sbjct: 248 NINYRLTNYNEIIKHPFL 265

Length = 267

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 84.3 bits (208), Expect = 1e-18
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V F    +    VA+K   +   L   +  +   E  I+K   HPNIV+L  
Sbjct: 3   LGKGNFGEV-FKGTLKDKTPVAVKTCKED--LPQELKIKFLSEARILKQYDHPNIVKLIG 59

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA---VAHCHSKGVYHR 133
           V   R  +YI++E V GG+    +  +   L+   ++  +  +DA   +A+  SK   HR
Sbjct: 60  VCTQRQPIYIVMELVPGGDFLSFLRKKKDELKT--KQLVKFALDAAAGMAYLESKNCIHR 117

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN----YVAPEVLSNRGYDGS 189
           DL   N L+     LK+SDFG+S     G+   +++ G       + APE L N G   S
Sbjct: 118 DLAARNCLVGENNVLKISDFGMSRQEDDGI---YSSSGLKQIPIKWTAPEAL-NYGRYSS 173

Query: 190 AADVWSCGVILFVLMA-GYLPF-GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
            +DVWS G++L+   + G  P+ G T+     +       SCP         ++ +  D 
Sbjct: 174 ESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDY 233

Query: 248 NPKTRIRIEGIRK 260
            P+ R +   ++K
Sbjct: 234 KPENRPKFSELQK 246

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 85.9 bits (212), Expect = 1e-18
 Identities = 81/308 (26%), Positives = 130/308 (42%), Gaps = 48/308 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + IG G    V  A +   G +VA+K L++          +  RE+ ++K V H 
Sbjct: 22  RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHK 80

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAHCH 126
           NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H H
Sbjct: 81  NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 140

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   GY
Sbjct: 141 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILGMGY 199

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI------NAAEFSC----------- 229
             +  D+WS G I+  L+ G + F  TD    + K+       +AEF             
Sbjct: 200 KEN-VDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVE 258

Query: 230 --------------PFWF-----------STGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
                         P W            ++ A  L+ K+L  +P  RI ++   +HP+ 
Sbjct: 259 NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318

Query: 265 RKNYNPVK 272
              Y+P +
Sbjct: 319 TVWYDPAE 326

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 84.7 bits (209), Expect = 3e-18
 Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 16/221 (7%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A +    + VA+K L++   +++  R   +  RE+ ++K ++
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHMK 72

Query: 68  HPNIVRLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V    T      +VY++   +  G   + IV   +L +   +    QL+  
Sbjct: 73  HENVIGLLDVFTPATSIENFNEVYLVTNLM--GADLNNIVKCQKLSDEHVQFLIYQLLRG 130

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS G+ HRDLKP N+ ++    L++ DFGL+   +Q  + +     T  Y APE++
Sbjct: 131 LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADDEMTGYVATRWYRAPEIM 187

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
            N  +     D+WS G I+  L+ G   F   D     K+I
Sbjct: 188 LNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRI 228

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 82.7 bits (204), Expect = 5e-18
 Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 18/230 (7%)

Query: 15  RTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + IG G F +V     +  G     VA+K L      K R       E SIM    H NI
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQR--QDFLSEASIMGQFSHHNI 68

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           +RL  V+       II E++  G L DK +  H G           + +   + +     
Sbjct: 69  IRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN 127

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNRGY 186
             HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + APE ++ R +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187

Query: 187 DGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKIN-----AAEFSCP 230
             SA+DVWS G++++ +M+ G  P+ +     + K IN      A   CP
Sbjct: 188 -TSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCP 236

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 82.0 bits (203), Expect = 9e-18
 Identities = 59/215 (27%), Positives = 100/215 (46%), Gaps = 38/215 (17%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
            R +G G F +V       T + VA+K L   T+      +   +E  IMK +RH  +V+
Sbjct: 11  ERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQ 65

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY--FQQLID-------AVAH 124
           L+ V +    +YI+ E+++ G L D        L++   +     QL+D        +A+
Sbjct: 66  LYAVCSEEEPIYIVTEYMSKGSLLD-------FLKSGEGKKLRLPQLVDMAAQIAEGMAY 118

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL-------PQQGVELLHTTCGTP-NYV 176
             S+   HRDL   N+L+      K++DFGL+ L        ++G +        P  + 
Sbjct: 119 LESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKF-------PIKWT 171

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
           APE  +N G     +DVWS G++L  ++  G +P+
Sbjct: 172 APEA-ANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 82.1 bits (203), Expect = 9e-18
 Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 19/227 (8%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMK 64
            + E  + +G G F  V        GE     VA+KVL + T  K     +I  E  +M 
Sbjct: 7   TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKA--NKEILDEAYVMA 64

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVA 123
            V HP++VRL  +  S   V +I + +  G L D +  H+  +       +  Q+   ++
Sbjct: 65  SVDHPHVVRLLGICLSSQ-VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMS 123

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVL 181
           +   K + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E +
Sbjct: 124 YLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESI 183

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
            +R Y    +DVWS GV ++ LM     FG    P  Y+ I A E  
Sbjct: 184 LHRIYT-HKSDVWSYGVTVWELMT----FGA--KP--YEGIPAVEIP 221

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 83.2 bits (205), Expect = 1e-17
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 18/214 (8%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIV 66
           +Y+    +G G +  V  A + +TG  VA+K L++   S I   R      RE+ ++K +
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHM 73

Query: 67  RHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           +H N++ L +V            VY++   +  G   + IV   +L ++  +    Q++ 
Sbjct: 74  KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILR 131

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
            + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE+
Sbjct: 132 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEI 188

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + N  +     D+WS G I+  L+ G   F  TD
Sbjct: 189 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 222

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 82.7 bits (204), Expect = 1e-17
 Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 18/215 (8%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKI 65
            +Y   + +G G +  V  A +R TG  VA+K L +   S +   R      RE+ ++K 
Sbjct: 15  DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAY----RELRLLKH 70

Query: 66  VRHPNIVRLHEVLASRTKV------YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           ++H N++ L +V      +      Y+++ F+  G    K++   +L E+  +    Q++
Sbjct: 71  MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQML 128

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
             + + H+ G+ HRDLKP NL ++    LK+ DFGL+   +Q    +     T  Y APE
Sbjct: 129 KGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA---RQTDSEMTGYVVTRWYRAPE 185

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           V+ N  +     D+WS G I+  ++ G   F   D
Sbjct: 186 VILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHD 220

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 81.7 bits (202), Expect = 1e-17
 Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 10/205 (4%)

Query: 12  EVGRTIGEGTFAKVRFA--QNRETGE-SVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
            +GR IGEG F  V      + E  + +VA+K     T    R  ++  +E  IM+   H
Sbjct: 9   TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVR--EKFLQEAYIMRQFDH 66

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHS 127
           P+IV+L  V+ +   V+I++E    GEL   + V++  L       Y  QL  A+A+  S
Sbjct: 67  PHIVKLIGVI-TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLES 125

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           K   HRD+   N+L+ S   +K+ DFGLS  L  +             ++APE ++ R +
Sbjct: 126 KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRF 185

Query: 187 DGSAADVWSCGVILF-VLMAGYLPF 210
             SA+DVW  GV ++ +LM G  PF
Sbjct: 186 T-SASDVWMFGVCMWEILMLGVKPF 209

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 83.6 bits (206), Expect = 2e-17
 Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 24/233 (10%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKV---------------RFAQNRETGESVAMKVLAKS 45
           +K     +A + V   +  G F K+               R   +   G+    +++AK 
Sbjct: 140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR 199

Query: 46  TILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII---LEFVTGGELFDKIVH 102
                R   Q++ EI  +  + H NI+++ E+L S    Y+I    +F     ++D+   
Sbjct: 200 VKAGSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFD 259

Query: 103 -QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP-- 159
            + R L    R   +QL+ AV + H K + HRD+K EN+ L+  G + + DFG +A+P  
Sbjct: 260 WKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFG-TAMPFE 318

Query: 160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFG 211
           ++     +   GT    +PE+L+  GY     D+WSCG+IL  +++  + P G
Sbjct: 319 KEREAFDYGWVGTVATNSPEILAGDGY-CEITDIWSCGLILLDMLSHDFCPIG 370

Length = 501

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 81.4 bits (201), Expect = 2e-17
 Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 22/212 (10%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVL---AKSTILKHRMVDQIKREISIMKIVRH 68
           E    +G G    V   ++  TG  +A KV+   AKS++ K     QI RE+ IM   R 
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRK-----QILRELQIMHECRS 62

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHS 127
           P IV  +    +   + + +EF+  G L D+I  + G +      +    +++ + + ++
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSL-DRIYKKGGPIPVEILGKIAVAVVEGLTYLYN 121

Query: 128 K-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH----TTCGTPNYVAPEVLS 182
              + HRD+KP N+L++S G +K+ DFG+S       EL++    T  GT  Y++PE + 
Sbjct: 122 VHRIMHRDIKPSNILVNSRGQIKLCDFGVSG------ELINSIADTFVGTSTYMSPERIQ 175

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
              Y    +DVWS G+ +  L  G  PF  ++
Sbjct: 176 GGKYT-VKSDVWSLGISIIELALGKFPFAFSN 206

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 82.1 bits (203), Expect = 3e-17
 Identities = 77/304 (25%), Positives = 130/304 (42%), Gaps = 49/304 (16%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVRHPNIV 72
           R IG G F  V    +   G+ VA+K +     +   +V   ++ RE+ ++   +H N++
Sbjct: 6   RPIGYGAFGVVWSVTDPRDGKRVALKKMPN---VFQNLVSCKRVFRELKMLCFFKHDNVL 62

Query: 73  RLHEVLASR-----TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
              ++L         ++Y++ E +   +L   IV    L  +  + +  Q++  + + HS
Sbjct: 63  SALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHS 121

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRG 185
            G+ HRD+KP NLL++S   LK+ DFGL+ +  P +   +      T  Y APE+L    
Sbjct: 122 AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVV-TQYYRAPEILMGSR 180

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGE----------TDL---PTLYKKINAAE------ 226
           +  SA D+WS G I   L+   + F            TDL   P+L    +A E      
Sbjct: 181 HYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHI 240

Query: 227 ---------FSCPFWFSTGAT----SLIHKILDPNPKTRIRIEGIRKHPWF---RKNYNP 270
                        +  S+ AT     L+ ++L  +P  RI       HP+    R  Y+ 
Sbjct: 241 LRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHT 300

Query: 271 VKCS 274
             C 
Sbjct: 301 CMCK 304

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 80.7 bits (199), Expect = 3e-17
 Identities = 65/203 (32%), Positives = 102/203 (50%), Gaps = 21/203 (10%)

Query: 15  RTIGEGTFAKVRF----AQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV        N  TGE VA+K L +    ++      K+EI+I+K + H N
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNT--SGWKKEINILKTLYHEN 67

Query: 71  IVRLHEVLASRTK--VYIILEFVTGGELFDKI----VHQGRLLENDCRRYFQQLIDAVAH 124
           IV+     + +    + +I+E+V  G L D +    ++  +LL      + QQ+ + +A+
Sbjct: 68  IVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLL-----LFAQQICEGMAY 122

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVL 181
            HS+   HRDL   N+LLD+   +K+ DFGL+    +G E         + V   A E L
Sbjct: 123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECL 182

Query: 182 SNRGYDGSAADVWSCGVILFVLM 204
               +   A+DVWS GV L+ L+
Sbjct: 183 KENKF-SYASDVWSFGVTLYELL 204

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 80.4 bits (198), Expect = 5e-17
 Identities = 75/224 (33%), Positives = 113/224 (50%), Gaps = 18/224 (8%)

Query: 10  KYEVGRTIGEGTFAKVRFAQN-RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR- 67
           +YE    IGEG + KV  A++ +  G  VA+K +   T  +   +  I RE+++++ +  
Sbjct: 2   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI-REVAVLRHLET 60

Query: 68  --HPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V   SRT    K+ ++ E V        DK+   G   E   +    QL
Sbjct: 61  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTET-IKDMMFQL 119

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   HS  V HRDLKP+N+L+ S G +K++DFGL+ +    +  L +   T  Y AP
Sbjct: 120 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM-ALTSVVVTLWYRAP 178

Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYK 220
           EVL    Y  +  D+WS G I F  M    P   G +D+  L K
Sbjct: 179 EVLLQSSY-ATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGK 220

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 79.3 bits (196), Expect = 6e-17
 Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 12/224 (5%)

Query: 15  RTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + +G G F  V              VA+K L +  I   +   +  RE S+M  + HP I
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGK--KEFLREASVMAQLDHPCI 58

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           VRL  V      + +++E    G L   +  +  +  +D +    Q+   +A+  SK   
Sbjct: 59  VRLIGVCKGEP-LMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFV 117

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT-P-NYVAPEVLSNRGYDG 188
           HRDL   N+LL +    K+SDFG+S AL         TT G  P  + APE ++   +  
Sbjct: 118 HRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFS- 176

Query: 189 SAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAE-FSCP 230
           S +DVWS GV L+     G  P+GE     +   + + E    P
Sbjct: 177 SKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRP 220

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 79.3 bits (195), Expect = 6e-17
 Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 20/223 (8%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVR 73
           +TIG+G F  V     R  G  VA+K +      K+    Q    E S+M  +RH N+V+
Sbjct: 12  QTIGKGEFGDVMLGDYR--GNKVAVKCI------KNDATAQAFLAEASVMTQLRHSNLVQ 63

Query: 74  LHEVLAS-RTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQ-QLIDAVAHCHSKGV 130
           L  V+   +  +YI+ E++  G L D +  +GR +L  DC   F   + +A+ +  +   
Sbjct: 64  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF 123

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGS 189
            HRDL   N+L+      KVSDFGL+    +       T   P  + APE L  + +  +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLT----KEASSTQDTGKLPVKWTAPEALREKKFS-T 178

Query: 190 AADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI-NAAEFSCP 230
            +DVWS G++L+ + + G +P+    L  +  ++    +   P
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP 221

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 78.9 bits (194), Expect = 1e-16
 Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 15  RTIGEGTFAKVRFA-QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           + +G G F +V     N  T   VA+K L   T+     V     E ++MK ++H  +VR
Sbjct: 12  KKLGAGQFGEVWMGYYNNST--KVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVR 65

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           L+ V+     +YII E++  G L D +     G++L      +  Q+ + +A+   K   
Sbjct: 66  LYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSA 190
           HRDL+  N+L+      K++DFGL+ + +            P  + APE + N G     
Sbjct: 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI-NFGSFTIK 184

Query: 191 ADVWSCGVILF-VLMAGYLPF 210
           +DVWS G++L+ ++  G +P+
Sbjct: 185 SDVWSFGILLYEIVTYGKIPY 205

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 81.4 bits (201), Expect = 1e-16
 Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 32/231 (13%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++ R IG+G   +V  A +      VA+K + +       +  +  RE  I   + HP
Sbjct: 3   RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHP 62

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGEL--FDKIVHQGRLLENDCR---------RYFQQL 118
            IV ++ + +    VY  + ++ G  L    K V Q   L  +             F ++
Sbjct: 63  GIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKI 122

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-------------SALPQQGVEL 165
              + + HSKGV HRDLKP+N+LL  +G + + D+G                + ++ +  
Sbjct: 123 CATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICY 182

Query: 166 LHTT-----CGTPNYVAPEVLSNRGYDGS-AADVWSCGVILFVLMAGYLPF 210
              T      GTP+Y+APE L   G   S + D+++ GVIL+ ++    P+
Sbjct: 183 SSMTIPGKIVGTPDYMAPERL--LGVPASESTDIYALGVILYQMLTLSFPY 231

Length = 932

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 78.8 bits (194), Expect = 1e-16
 Identities = 67/211 (31%), Positives = 96/211 (45%), Gaps = 28/211 (13%)

Query: 17  IGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           IG G F +V   + +  G+    VA+K L      K R       E SIM    HPNI+ 
Sbjct: 12  IGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEASIMGQFDHPNIIH 69

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY-- 131
           L  V+     V II EF+  G L D  + Q     ND +    QL+  +    +   Y  
Sbjct: 70  LEGVVTKSRPVMIITEFMENGAL-DSFLRQ-----NDGQFTVIQLVGMLRGIAAGMKYLS 123

Query: 132 -----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT----CGTP-NYVAPEVL 181
                HRDL   N+L++S    KVSDFGLS   +        T       P  + APE +
Sbjct: 124 EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAI 183

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
           + R +  SA+DVWS G++++ +M+    +GE
Sbjct: 184 AYRKFT-SASDVWSYGIVMWEVMS----YGE 209

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 79.7 bits (196), Expect = 1e-16
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 74

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 75  HKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 134

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 192

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 193 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251

Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311

Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 312 PYINVWYDPAE 322

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 78.6 bits (194), Expect = 2e-16
 Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 28/266 (10%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV--RH--PNIV 72
           IG GT  +V   + ++TG  +A+K + ++        ++ KR +  + +V   H  P IV
Sbjct: 23  IGSGTCGQVYKMRFKKTGHVMAVKQMRRTG-----NKEENKRILMDLDVVLKSHDCPYIV 77

Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           + +    + + V+I +E +      DK++   QG + E+   +    ++ A+ +   K G
Sbjct: 78  KCYGYFITDSDVFICMELM--STCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG 135

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-LLHT-TCGTPNYVAPEVL----SN 183
           V HRD+KP N+LLD+ GN+K+ DFG+S    + V+    T + G   Y+APE +     N
Sbjct: 136 VIHRDVKPSNILLDASGNVKLCDFGISG---RLVDSKAKTRSAGCAAYMAPERIDPPDPN 192

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKINAAEFSCPF--WFSTGATS 239
             YD   ADVWS G+ L  L  G  P+   +T+   L K +     S P    FS    S
Sbjct: 193 PKYD-IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCS 251

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFR 265
            +   L  + + R +   + +HP+ R
Sbjct: 252 FVDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 78.2 bits (193), Expect = 2e-16
 Identities = 64/208 (30%), Positives = 94/208 (45%), Gaps = 26/208 (12%)

Query: 15  RTIGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           R +G G F +V     N  T   VA+K L   T+           E  IMK +RHP +++
Sbjct: 12  RKLGAGQFGEVWEGLWNNTT--PVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQ 65

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVY- 131
           L+ V      +YI+ E +  G L + +    GR L+        QLID  A   S   Y 
Sbjct: 66  LYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALK------LPQLIDMAAQVASGMAYL 119

Query: 132 ------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE-VLSN 183
                 HRDL   N+L+      KV+DFGL+ + ++ +         P  + APE  L N
Sbjct: 120 EAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYN 179

Query: 184 RGYDGSAADVWSCGVILFVLMA-GYLPF 210
           R    S  DVWS G++L  ++  G +P+
Sbjct: 180 RFSIKS--DVWSFGILLTEIVTYGRMPY 205

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 78.3 bits (193), Expect = 2e-16
 Identities = 65/199 (32%), Positives = 100/199 (50%), Gaps = 18/199 (9%)

Query: 17  IGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           +G+G F  V   +       TGE VA+K L  ST     + D  +REI I+K ++H NIV
Sbjct: 12  LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRD-FEREIEILKSLQHDNIV 68

Query: 73  RLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           +   V   A R  + +++E++  G L D +  H+ RL       Y  Q+   + +  SK 
Sbjct: 69  KYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR 128

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-----YVAPEVLSNR 184
             HRDL   N+L++S   +K+ DFGL+ +  Q  E  +     P      + APE L+  
Sbjct: 129 YVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE--YYKVREPGESPIFWYAPESLTES 186

Query: 185 GYDGSAADVWSCGVILFVL 203
            +   A+DVWS GV+L+ L
Sbjct: 187 KFS-VASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 79.3 bits (195), Expect = 2e-16
 Identities = 64/216 (29%), Positives = 101/216 (46%), Gaps = 6/216 (2%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V H 
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHK 83

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAHCH 126
           NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H H
Sbjct: 84  NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   GY
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILGMGY 202

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
             +  D+WS G I+  ++ G + F  TD    + K+
Sbjct: 203 KEN-VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 78.0 bits (192), Expect = 2e-16
 Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 25/263 (9%)

Query: 11  YEVGRTIGEGTFAKVRFAQ---NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +GR +G+G F  VR AQ      + + VA+K+L K+ I     +++  RE + MK   
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKML-KADIFSSSDIEEFLREAACMKEFD 59

Query: 68  HPNIVRLHEV-LASRTK-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID- 120
           HPN+++L  V L SR K       +IL F+  G+L   ++   R+ E       Q L+  
Sbjct: 60  HPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL-MSRIGEEPFTLPLQTLVRF 118

Query: 121 ------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP- 173
                  + +  SK   HRDL   N +L+    + V+DFGLS     G +     C +  
Sbjct: 119 MIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSG-DYYRQGCASKL 177

Query: 174 --NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKK-INAAEFSC 229
              ++A E L++  Y  + +DVW+ GV ++ +M  G  P+   +   +Y   I       
Sbjct: 178 PVKWLALESLADNVYT-THSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQ 236

Query: 230 PFWFSTGATSLIHKILDPNPKTR 252
           P         L+ +   P PK R
Sbjct: 237 PPDCLEDVYELMCQCWSPEPKCR 259

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 78.8 bits (194), Expect = 3e-16
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 33/221 (14%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIV 66
           +Y   + +G G +  V  A ++ TGE VA+K L++   S I   R      RE++++K +
Sbjct: 16  RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAY----RELTLLKHM 71

Query: 67  RHPNIVRLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLI 119
           +H N++ L +V  S          Y+++ ++       KI+  G  L  D  +Y   Q++
Sbjct: 72  QHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTD--LQKIM--GHPLSEDKVQYLVYQML 127

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV--- 176
             + + HS G+ HRDLKP NL ++    LK+ DFGL+          H       YV   
Sbjct: 128 CGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVVTR 178

Query: 177 ---APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
              APEV+ N  +     D+WS G I+  ++ G   F   D
Sbjct: 179 WYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 219

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 78.4 bits (193), Expect = 4e-16
 Identities = 53/208 (25%), Positives = 101/208 (48%), Gaps = 16/208 (7%)

Query: 2   KKQTRRVAK---YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR 58
           K++ R V     Y V +T+  G+  +V  A      + V +K+  K T L   M      
Sbjct: 56  KQKAREVVASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAM------ 109

Query: 59  EISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQ 117
              +++ V HP+++R+ + L S     ++L   +  +L+  +  +   L  +      +Q
Sbjct: 110 ---LLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQ 165

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
           +++ + + H++ + HRD+K EN+ ++    + + D G +  P      L    GT    A
Sbjct: 166 ILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL-GLAGTVETNA 224

Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMA 205
           PEVL+   Y+ S AD+WS G++LF ++A
Sbjct: 225 PEVLARDKYN-SKADIWSAGIVLFEMLA 251

Length = 357

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 76.7 bits (189), Expect = 5e-16
 Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 27/210 (12%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
            + +G G F  V   + R     VA+K++ +  + +    D    E  +M  + HPN+V+
Sbjct: 9   LKELGSGQFGVVHLGKWRGK-IDVAIKMIREGAMSE----DDFIEEAKVMMKLSHPNLVQ 63

Query: 74  LHEVLASRTKVYIILEFVTGGELFD------KIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           L+ V   +  ++I+ E++  G L +        +    LL+  C      + +A+ +  S
Sbjct: 64  LYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDM-C----SDVCEAMEYLES 118

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTP---NYVAPEVLS 182
            G  HRDL   N L+     +KVSDFGL+   L  Q      ++ GT     +  PEV  
Sbjct: 119 NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT----SSQGTKFPVKWAPPEVF- 173

Query: 183 NRGYDGSAADVWSCGVILF-VLMAGYLPFG 211
           +     S +DVWS GV+++ V   G +P+ 
Sbjct: 174 DYSRFSSKSDVWSFGVLMWEVFSEGKMPYE 203

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 76.0 bits (187), Expect = 8e-16
 Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 17/203 (8%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V   + R     VA+K + +  + +   +++ K    +M  + HP +V+L
Sbjct: 10  KELGSGQFGVVHLGKWRAQ-IKVAIKAINEGAMSEEDFIEEAK----VMMKLSHPKLVQL 64

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  +YI+ EF+  G L + +   QG+L ++      Q + + + +       HR
Sbjct: 65  YGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHR 124

Query: 134 DLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDG 188
           DL   N L+ S G +KVSDFG++   L  +      ++ G      +  PEV +   Y  
Sbjct: 125 DLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT----SSSGAKFPVKWSPPEVFNFSKYS- 179

Query: 189 SAADVWSCGVILF-VLMAGYLPF 210
           S +DVWS GV+++ V   G +PF
Sbjct: 180 SKSDVWSFGVLMWEVFTEGKMPF 202

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 76.1 bits (187), Expect = 9e-16
 Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 31/210 (14%)

Query: 15  RTIGEGTFAKVRFAQNRETGE-SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           + +G G F  V++ + R  G+  VA+K++ + ++ +    D+   E  +M  + H  +V+
Sbjct: 10  KELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSE----DEFIEEAKVMMKLSHEKLVQ 63

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVAHCH 126
           L+ V   +  +YI+ E+++ G L + +   G+  +        QL++        +A+  
Sbjct: 64  LYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQP------SQLLEMCKDVCEGMAYLE 117

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTP---NYVAPEVL 181
           SK   HRDL   N L+D  G +KVSDFGLS   L  +      ++ G+     +  PEVL
Sbjct: 118 SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT----SSVGSKFPVRWSPPEVL 173

Query: 182 SNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
               +  S +DVW+ GV+++ V   G +P+
Sbjct: 174 LYSKFS-SKSDVWAFGVLMWEVYSLGKMPY 202

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 76.6 bits (189), Expect = 1e-15
 Identities = 62/212 (29%), Positives = 102/212 (48%), Gaps = 27/212 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFA--QNRETGESVAMKVLAKSTILKHRMVDQIK-REISIMKIV 66
           KYE+   IG GT+ +V  A  +N + G+  A+K   K    ++  + Q   REI++++ +
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKF-KGDKEQYTGISQSACREIALLREL 59

Query: 67  RHPNIVRLHEVLASRT--KVYIILEFVTGGELFD--KIVHQGR------LLENDCRRYFQ 116
           +H N+V L EV        VY++ ++       D  +I+   R      +  +  +    
Sbjct: 60  KHENVVSLVEVFLEHADKSVYLLFDYAE----HDLWQIIKFHRQAKRVSIPPSMVKSLLW 115

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGN----LKVSDFGLSALPQQGVELLHTTCG- 171
           Q+++ V + HS  V HRDLKP N+L+   G     +K+ D GL+ L    ++ L      
Sbjct: 116 QILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPV 175

Query: 172 --TPNYVAPEV-LSNRGYDGSAADVWSCGVIL 200
             T  Y APE+ L  R Y   A D+W+ G I 
Sbjct: 176 VVTIWYRAPELLLGARHYT-KAIDIWAIGCIF 206

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 76.6 bits (188), Expect = 2e-15
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 6/203 (2%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G    V   Q++ +G  +A K++     +K  + +QI RE+ ++     P IV  + 
Sbjct: 13  LGAGNGGVVTKVQHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 70

Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDL 135
              S  ++ I +E + GG L   +    R+ E    +    ++  +A+   K  + HRD+
Sbjct: 71  AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 130

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y    +D+WS
Sbjct: 131 KPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-VQSDIWS 187

Query: 196 CGVILFVLMAGYLPFGETDLPTL 218
            G+ L  L  G  P    D   L
Sbjct: 188 MGLSLVELAIGRYPIPPPDAKEL 210

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 75.5 bits (186), Expect = 2e-15
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 48/223 (21%)

Query: 10  KYEVGRTIGEGTFAKVR--FAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V    A+    GE    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 7   KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERI--EFLNEASVMK 64

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR--------RYFQ 116
                ++VRL  V+++     +++E +  G+L    +   R    +          ++ Q
Sbjct: 65  EFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKS-YLRSRRPEAENNPGLGPPTLQKFIQ 123

Query: 117 ---QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL---------------SAL 158
              ++ D +A+  +K   HRDL   N ++     +K+ DFG+                 L
Sbjct: 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
           P +             ++APE L + G   + +DVWS GV+L+
Sbjct: 184 PVR-------------WMAPESLKD-GVFTTKSDVWSFGVVLW 212

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 74.5 bits (183), Expect = 4e-15
 Identities = 70/271 (25%), Positives = 114/271 (42%), Gaps = 40/271 (14%)

Query: 16  TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
            +G G    V  A +  T   +A+KV+     ++  +  QI  E+ I+     P I+  +
Sbjct: 8   ILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVE--LQKQIMSELEILYKCDSPYIIGFY 65

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
                  ++ I  EF+ GG L D      ++ E+   R    ++  + +  S  + HRD+
Sbjct: 66  GAFFVENRISICTEFMDGGSL-DVY---RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDV 121

Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSNRGYDGSAADVW 194
           KP N+L+++ G +K+ DFG+S    Q V  +  T  GT  Y+APE +S   Y G  +DVW
Sbjct: 122 KPSNMLVNTRGQVKLCDFGVS---TQLVNSIAKTYVGTNAYMAPERISGEQY-GIHSDVW 177

Query: 195 SCGVILFVLMAGYLPFGE-------------------TDLPTLYKKINAAEFSCPFWFST 235
           S G+    L  G  P+ +                    D P L       +FS  F    
Sbjct: 178 SLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL----PVGQFSEKF---- 229

Query: 236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
                I + +   PK R   E +  HP+  +
Sbjct: 230 --VHFITQCMRKQPKERPAPENLMDHPFIVQ 258

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 74.7 bits (184), Expect = 4e-15
 Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 23/208 (11%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI-SIMKIVRHPNIVRLH 75
           IG G F  V    ++ +G  +A+K + +ST+ +     ++  ++  +M+    P IV+ +
Sbjct: 12  IGRGAFGTVNKMLHKPSGTIMAVKRI-RSTVDEKEQ-KRLLMDLDVVMRSSDCPYIVKFY 69

Query: 76  EVLASRTKVYIILEFV-TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG----- 129
             L      +I +E +    + F K V+     E       ++++  +A    K      
Sbjct: 70  GALFREGDCWICMELMDISLDKFYKYVY-----EVLKSVIPEEILGKIAVATVKALNYLK 124

Query: 130 ----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE-VLSNR 184
               + HRD+KP N+LLD  GN+K+ DFG+S      +         P Y+APE +  + 
Sbjct: 125 EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDAGCRP-YMAPERIDPSA 183

Query: 185 --GYDGSAADVWSCGVILFVLMAGYLPF 210
             GYD   +DVWS G+ L+ +  G  P+
Sbjct: 184 RDGYD-VRSDVWSLGITLYEVATGKFPY 210

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 73.5 bits (180), Expect = 6e-15
 Identities = 55/207 (26%), Positives = 101/207 (48%), Gaps = 13/207 (6%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
              ++ + +G G F +V  A  N+ T   VA+K +   ++     V+    E ++MK ++
Sbjct: 6   ESLKLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSM----SVEAFLAEANVMKTLQ 59

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHC 125
           H  +V+LH V+ ++  +YII EF+  G L D  K     +        +  Q+ + +A  
Sbjct: 60  HDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 118

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
             +   HRDL+  N+L+ +    K++DFGL+ + +            P  + APE + N 
Sbjct: 119 EQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI-NF 177

Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
           G     +DVWS G++L  ++  G +P+
Sbjct: 178 GSFTIKSDVWSFGILLMEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 74.7 bits (183), Expect = 6e-15
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 7   FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 64

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 65  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 124

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 125 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 181

Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTL 218
            +D+WS G+ L  +  G  P    D   L
Sbjct: 182 QSDIWSMGLSLVEMAIGRYPIPPPDAKEL 210

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 72.3 bits (177), Expect = 2e-14
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 13/200 (6%)

Query: 15  RTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV       +   TGE VA+K L   +   H  +  +K+EI I++ + H N
Sbjct: 10  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHEN 67

Query: 71  IVRLHEVLASR--TKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   +        + +I+EF+  G L + +  ++ ++      +Y  Q+   + +  S
Sbjct: 68  IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGS 127

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ--QGVELLHTTCGTPNY-VAPEVLSNR 184
           +   HRDL   N+L++S   +K+ DFGL+   +  +    +     +P +  APE L   
Sbjct: 128 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS 187

Query: 185 GYDGSAADVWSCGVILFVLM 204
            +   A+DVWS GV L+ L+
Sbjct: 188 KF-YIASDVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 62/240 (25%), Positives = 109/240 (45%), Gaps = 36/240 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           +  +G+ +GEG F +V  A+     N     +VA+K+L K    +  + D +  E+ +MK
Sbjct: 13  RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKML-KDDATEKDLSDLVS-EMEMMK 70

Query: 65  IV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFD----------------KIVHQGRLL 107
           ++ +H NI+ L  V      +Y+++E+   G L D                    +  L 
Sbjct: 71  MIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT 130

Query: 108 ENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL- 166
           + D   +  Q+   +    SK   HRDL   N+L+     +K++DFGL+    + +  + 
Sbjct: 131 QKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLA----RDIHHID 186

Query: 167 ----HTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYK 220
                T    P  ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 187 YYRKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 73.1 bits (179), Expect = 3e-14
 Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 25/227 (11%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y++G  IG G+F  V  A   +T E VA+K + +    K+R       E+ IMK + H N
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR-------ELLIMKNLNHIN 120

Query: 71  IVRLHEVLAS----RTKVYIILEFVTGGELFDKIVHQ--GRLLEND-------CRRYFQQ 117
           I+ L +   +    + +  I L  V   E   + VH+       N+        + Y  Q
Sbjct: 121 IIFLKDYYYTECFKKNEKNIFLNVVM--EFIPQTVHKYMKHYARNNHALPLFLVKLYSYQ 178

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           L  A+A+ HSK + HRDLKP+NLL+D   + LK+ DFG +     G   +   C +  Y 
Sbjct: 179 LCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYIC-SRFYR 237

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKI 222
           APE++       +  D+WS G I+  ++ GY  F G++ +  L + I
Sbjct: 238 APELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRII 284

Length = 440

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 22/270 (8%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVDQIKREISIMKIVRHP 69
           EV   +G G +  V   ++  TG  +A+K +  +  +  + R++  +  +IS M+ V  P
Sbjct: 4   EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDL--DIS-MRSVDCP 60

Query: 70  NIVRLHEVLASRTKVYIILEFV-TGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCH 126
             V  +  L     V+I +E + T  + F K V      + E+   +    ++ A+ + H
Sbjct: 61  YTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH 120

Query: 127 SK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPE---- 179
           SK  V HRD+KP N+L++  G +K+ DFG+S      V+ +  T   G   Y+APE    
Sbjct: 121 SKLSVIHRDVKPSNVLINRNGQVKLCDFGISG---YLVDSVAKTIDAGCKPYMAPERINP 177

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAAEFSCPF-WFSTG 236
            L+ +GYD   +DVWS G+ +  L  G  P+    T    L + +       P   FS  
Sbjct: 178 ELNQKGYD-VKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPE 236

Query: 237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
               ++K L  N K R     + +HP+F  
Sbjct: 237 FQDFVNKCLKKNYKERPNYPELLQHPFFEL 266

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 69.4 bits (170), Expect = 3e-13
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 27/216 (12%)

Query: 19  EGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR---EISIMKIVRHPNIVR-L 74
           EGTF ++ +    +       +V  K T+  H    Q+     E  ++  + H NI+  L
Sbjct: 16  EGTFGRIFYGILIDEKPGKEEEVFVK-TVKDHASEIQVTLLLQESCLLYGLSHQNILPIL 74

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF--QQLID-------AVAHC 125
           H  +      +++  ++  G L    + Q RL E +  +    QQL+         +++ 
Sbjct: 75  HVCIEDGEPPFVLYPYMNWGNL-KLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYL 133

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPN----YVAPE 179
           H +GV H+D+   N ++D    +K++D  LS    P       H      N    ++A E
Sbjct: 134 HKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMD----YHCLGDNENRPVKWMALE 189

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETD 214
            L N+ Y  SA+DVWS GV+L+ LM  G  P+ E D
Sbjct: 190 SLVNKEYS-SASDVWSFGVLLWELMTLGQTPYVEID 224

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 68.7 bits (168), Expect = 3e-13
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 11/200 (5%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F +V           VA+K L + ++      +    E ++MK ++HP +VRL
Sbjct: 12  KKLGAGQFGEVWMGYYNGH-TKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRL 66

Query: 75  HEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           + V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    K   H
Sbjct: 67  YAVV-TQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIH 125

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAA 191
           RDL+  N+L+      K++DFGL+ L +            P  + APE + N G     +
Sbjct: 126 RDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKS 184

Query: 192 DVWSCGVILF-VLMAGYLPF 210
           DVWS G++L  ++  G +P+
Sbjct: 185 DVWSFGILLTEIVTYGRIPY 204

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 69.2 bits (169), Expect = 4e-13
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 38/239 (15%)

Query: 13  VGRTIGEGTFAKVRFA-------QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           +G+ +GEG F +V  A          +   +VA+K+L K       + D I  E+ +MK+
Sbjct: 16  LGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKML-KDNATDKDLADLIS-EMELMKL 73

Query: 66  V-RHPNIVRLHEVLASRTKVYIILEFVTGGEL---------------FDKI-VHQGRLLE 108
           + +H NI+ L  V      +Y+I+E+   G L               FD   V + +L  
Sbjct: 74  IGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSF 133

Query: 109 NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT 168
            D      Q+   + +  S+   HRDL   N+L+     +K++DFGL+    +GV  +  
Sbjct: 134 KDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLA----RGVHDIDY 189

Query: 169 TCGTPN------YVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
              T N      ++APE L +R Y    +DVWS G++++ +   G  P+    +  L+K
Sbjct: 190 YKKTSNGRLPVKWMAPEALFDRVYT-HQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK 247

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 68.6 bits (168), Expect = 5e-13
 Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 72/301 (23%)

Query: 37  VAMKVLAKST--ILKHRMV---------DQIKREISIMKIVRHPNIVRLHEVLASRTKVY 85
           V  KVL + +  I+  +++         +QI RE+ ++     P IV  +    S  ++ 
Sbjct: 16  VVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEIS 75

Query: 86  IILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLD 143
           I +E + GG L D+++ + GR+ EN   +    ++  + +   K  + HRD+KP N+L++
Sbjct: 76  ICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN 134

Query: 144 SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVL 203
           S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y    +D+WS G+ L  +
Sbjct: 135 SRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYTVQ-SDIWSLGLSLVEM 191

Query: 204 MAGYLPFGETDLPTLYKKINAAEFSCPF-------------------------------- 231
             G  P     +P    K   A F  P                                 
Sbjct: 192 AIGRYP-----IPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYI 246

Query: 232 -----------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVN 280
                       FS      + K L  NPK R  ++ + KHP+ ++       +E EEV+
Sbjct: 247 VNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR-------AELEEVD 299

Query: 281 L 281
            
Sbjct: 300 F 300

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 68.1 bits (166), Expect = 6e-13
 Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 11/212 (5%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IG G F  V      E  + VA+K     TI +  M ++    E  +M  + HP +V+L+
Sbjct: 12  IGSGQFGLVWLGYWLEKRK-VAIK-----TIREGAMSEEDFIEEAQVMMKLSHPKLVQLY 65

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
            V   R+ + ++ EF+  G L D +  Q G+  +         + + +A+  S  V HRD
Sbjct: 66  GVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRD 125

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAADV 193
           L   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +DV
Sbjct: 126 LAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYS-SKSDV 184

Query: 194 WSCGVILF-VLMAGYLPFGETDLPTLYKKINA 224
           WS GV+++ V   G  P+       + + INA
Sbjct: 185 WSFGVLMWEVFSEGKTPYENRSNSEVVETINA 216

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 67.1 bits (164), Expect = 1e-12
 Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 25/219 (11%)

Query: 12  EVGRTIGEGTFAKVRFAQNR-ETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRH 68
            + R +G G F +V     R   G++V ++V  K+        D+     E  IM    H
Sbjct: 9   TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH 68

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI----DAVAH 124
            NIVRL  V   R   +I+LE + GG+L   +       E       + L+    D    
Sbjct: 69  QNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKG 128

Query: 125 CH---SKGVYHRDLKPENLLLDSYGN---LKVSDFGL------SALPQQGVELLHTTCGT 172
           C         HRD+   N LL   G     K++DFG+      ++  ++G   +      
Sbjct: 129 CKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWM 188

Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
           P    PE   + G   S  DVWS GV+L+ + + GY+P+
Sbjct: 189 P----PEAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPY 222

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 66.6 bits (162), Expect = 2e-12
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 25/207 (12%)

Query: 15  RTIGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           + +G G F +V     N  T   VA+K L   T+     ++    E  IMK +RH  +V+
Sbjct: 12  KKLGNGQFGEVWMGTWNGNT--KVAVKTLKPGTMSPESFLE----EAQIMKKLRHDKLVQ 65

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVY- 131
           L+ V+ S   +YI+ E+++ G L D +   +GR L+         L+D  A   +   Y 
Sbjct: 66  LYAVV-SEEPIYIVTEYMSKGSLLDFLKDGEGRALK------LPNLVDMAAQVAAGMAYI 118

Query: 132 ------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
                 HRDL+  N+L+      K++DFGL+ L +            P  + APE  +  
Sbjct: 119 ERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALY 177

Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPF 210
           G     +DVWS G++L  L+  G +P+
Sbjct: 178 GRFTIKSDVWSFGILLTELVTKGRVPY 204

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 66.2 bits (161), Expect = 3e-12
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 34/237 (14%)

Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 22  LGKPLGEGCFGQVVMAEAIGLDKEKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 77

Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                V + +L
Sbjct: 78  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQL 137

Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 138 SFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 197

Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 198 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 253

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 65.8 bits (160), Expect = 4e-12
 Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 32/230 (13%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-----IMKIVRHPNI 71
           IGEG F +V  A  ++ G    +K+ A   +LK    +   R+ +     + K+  HPNI
Sbjct: 10  IGEGNFGQVIRAMIKKDG----LKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI 65

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND--------------CRRYFQQ 117
           + L     +R  +YI +E+   G L D  + + R+LE D               ++  Q 
Sbjct: 66  INLLGACENRGYLYIAIEYAPYGNLLD-FLRKSRVLETDPAFAKEHGTASTLTSQQLLQF 124

Query: 118 LIDAVAHCH---SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP- 173
             D          K   HRDL   N+L+      K++DFGLS    + V +  T    P 
Sbjct: 125 ASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSR--GEEVYVKKTMGRLPV 182

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
            ++A E L+   Y  + +DVWS GV+L+ +++ G  P+       LY+K+
Sbjct: 183 RWMAIESLNYSVYT-TKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 65.6 bits (160), Expect = 5e-12
 Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 38/214 (17%)

Query: 17  IGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           +GEG F KV   +      R +  SVA+K L ++   K +   + ++E  +M  ++HPNI
Sbjct: 13  LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQ--QEFRQEAELMSDLQHPNI 70

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIV----HQGRLLEN---------DCRRYFQ-- 116
           V L  V        ++ E++  G+L + +V    H     E+         DC  +    
Sbjct: 71  VCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIA 130

Query: 117 -QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL-------PQQGVELLHT 168
            Q+   + +  S    HRDL   N L+     +K+SDFGLS           Q   LL  
Sbjct: 131 IQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPV 190

Query: 169 TCGTPNYVAPE-VLSNRGYDGSAADVWSCGVILF 201
                 ++ PE +L  +    S  D+WS GV+L+
Sbjct: 191 -----RWMPPEAILYGKFTTES--DIWSFGVVLW 217

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 65.9 bits (160), Expect = 5e-12
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 21/212 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE G  +G GT+  V  A+ ++  +    K  A   I    +     REI++++ ++HP
Sbjct: 3   EYE-GCKVGRGTYGHVYKAKRKDGKDE---KEYALKQIEGTGISMSACREIALLRELKHP 58

Query: 70  NIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQG--------RLLENDCRRYFQQLI 119
           N++ L +V  S +  KV+++ ++           H+         +L  +  +    Q++
Sbjct: 59  NVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQIL 118

Query: 120 DAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSAL---PQQGVELLHTTCGT 172
           D + + H+  V HRDLKP N+L+       G +K++D G + L   P + +  L     T
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 178

Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
             Y APE+L    +   A D+W+ G I   L+
Sbjct: 179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 64.9 bits (158), Expect = 6e-12
 Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 22/208 (10%)

Query: 15  RTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G G F ++     +    RE    VA+  L      K R       E   +    H 
Sbjct: 11  RILGTGRFGELCRGCLKLPSKREL--PVAIHTLRAGCSDKQRR--GFLAEALTLGQFDHS 66

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NIVRL  V+     + I+ E+++ G L D  +  H+G+L+          L   + +   
Sbjct: 67  NIVRLEGVITRGNTMMIVTEYMSNGAL-DSFLRKHEGQLVAGQLMGMLPGLASGMKYLSE 125

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNR 184
            G  H+ L    +L++S    K+S F    L +   E ++TT    + V   APE +   
Sbjct: 126 MGYVHKGLAAHKVLVNSDLVCKISGFR--RLQEDKSEAIYTTMSGKSPVLWAAPEAI-QY 182

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGE 212
            +  SA+DVWS G++++ +M+    +GE
Sbjct: 183 HHFSSASDVWSFGIVMWEVMS----YGE 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 64.7 bits (157), Expect = 7e-12
 Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 32/230 (13%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-----IMKIVRHPNI 71
           IGEG F +V  A+ ++ G    +++ A    +K        R+ +     + K+  HPNI
Sbjct: 3   IGEGNFGQVLKARIKKDG----LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 58

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-----------------CRRY 114
           + L      R  +Y+ +E+   G L D  + + R+LE D                    +
Sbjct: 59  INLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLHF 117

Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP- 173
              +   + +   K   HRDL   N+L+      K++DFGLS    Q V +  T    P 
Sbjct: 118 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPV 175

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
            ++A E L+   Y  + +DVWS GV+L+ +++ G  P+       LY+K+
Sbjct: 176 RWMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 224

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 64.7 bits (157), Expect = 8e-12
 Identities = 74/269 (27%), Positives = 116/269 (43%), Gaps = 26/269 (9%)

Query: 13  VGRTIGEGTFAKVRFAQ--NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +G+T+GEG F  V   Q    ++   VA+K +  +   +  M D +  E   MK   HPN
Sbjct: 3   LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFL-SEAVCMKEFDHPN 61

Query: 71  IVRLHEVLASRTKV------YIILEFVTGGELFDKIVHQGRLLENDCRRYF--QQLI--- 119
           ++RL  V     +        +IL F+  G+L   +++  RL   DC +Y   Q L+   
Sbjct: 62  VMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYS-RL--GDCPQYLPTQMLVKFM 118

Query: 120 ----DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT--P 173
                 + +  SK   HRDL   N +L+   N+ V+DFGLS     G             
Sbjct: 119 TDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPV 178

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAA-EFSCPF 231
            ++A E L++R Y  + +DVWS GV ++ +   G  P+   +   +Y  +        P 
Sbjct: 179 KWIAIESLADRVYT-TKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPP 237

Query: 232 WFSTGATSLIHKILDPNPKTRIRIEGIRK 260
               G  SL+      NPK R   E +R 
Sbjct: 238 DCLDGLYSLMSSCWLLNPKDRPSFETLRC 266

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 65.1 bits (158), Expect = 9e-12
 Identities = 54/212 (25%), Positives = 98/212 (46%), Gaps = 21/212 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE G  +G GT+  V  A+ ++  +    +  A   I    +     REI++++ ++HP
Sbjct: 3   EYE-GCKVGRGTYGHVYKAKRKDGKDD---RDYALKQIEGTGISMSACREIALLRELKHP 58

Query: 70  NIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQG--------RLLENDCRRYFQQLI 119
           N++ L +V  S    KV+++ ++           H+         +L     +    Q++
Sbjct: 59  NVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 118

Query: 120 DAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSAL---PQQGVELLHTTCGT 172
           D + + H+  V HRDLKP N+L+       G +K++D G + L   P + +  L     T
Sbjct: 119 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 178

Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
             Y APE+L    +   A D+W+ G I   L+
Sbjct: 179 FWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 64.3 bits (156), Expect = 1e-11
 Identities = 68/248 (27%), Positives = 109/248 (43%), Gaps = 12/248 (4%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V       T + VA+K L   T+    M +   +E  IMK +RH  +V L+ 
Sbjct: 14  LGQGCFGEVWMGTWNGTTK-VAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYA 68

Query: 77  VLASRTKVYIILEFVTGGELFDKIVH-QGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ S   +YI+ EF+  G L D +    G+ L+         Q+ D +A+       HRD
Sbjct: 69  VV-SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRD 127

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAADV 193
           L+  N+L+      K++DFGL+ L +            P  + APE  +  G     +DV
Sbjct: 128 LRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGRFTIKSDV 186

Query: 194 WSCGVILFVLMA-GYLPF-GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKT 251
           WS G++L  L+  G +P+ G  +   L +        CP         L+      +P  
Sbjct: 187 WSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDE 246

Query: 252 RIRIEGIR 259
           R   E I+
Sbjct: 247 RPTFEYIQ 254

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 64.5 bits (157), Expect = 1e-11
 Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 24/218 (11%)

Query: 13  VGRTIGEGTFAKVRFAQ-NRETGES--VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +G+ +GEG F  V   Q +++ G    VA+K + K  I  +  +++   E + MK   HP
Sbjct: 3   LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTM-KLDIHTYSEIEEFLSEAACMKDFDHP 61

Query: 70  NIVRLHEV---LASRTKV---YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
           N+++L  V    +S  K+    +IL F+  G+L   +++  RL     +   Q L+  + 
Sbjct: 62  NVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYS-RLGGLPEKLPLQTLLKFMV 120

Query: 124 -------HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP--- 173
                  +  ++   HRDL   N +L     + V+DFGLS     G +            
Sbjct: 121 DIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSG-DYYRQGRIAKMPV 179

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
            ++A E L++R Y  S +DVW+ GV ++ +   G  P+
Sbjct: 180 KWIAIESLADRVYT-SKSDVWAFGVTMWEIATRGQTPY 216

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 64.3 bits (156), Expect = 1e-11
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 27/206 (13%)

Query: 17  IGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G+G F +V     N  T   VA+K L   T+     +    +E  +MK +RH  +V+L+
Sbjct: 14  LGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKLVQLY 67

Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLIDAVAHCHSKGVY-- 131
            V+ S   +YI+ E+++ G L D        L+ +  +Y +  QL+D  A   S   Y  
Sbjct: 68  AVV-SEEPIYIVTEYMSKGSLLD-------FLKGEMGKYLRLPQLVDMAAQIASGMAYVE 119

Query: 132 -----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRG 185
                HRDL+  N+L+      KV+DFGL+ L +            P  + APE  +  G
Sbjct: 120 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYG 178

Query: 186 YDGSAADVWSCGVILFVLMA-GYLPF 210
                +DVWS G++L  L   G +P+
Sbjct: 179 RFTIKSDVWSFGILLTELTTKGRVPY 204

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%)

Query: 58  REISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQ 117
           REI I+K + H  I+ L      ++ V +++      +LF  +   G L         ++
Sbjct: 135 REIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRR 193

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC----GTP 173
           L++A+A+ H +G+ HRD+K EN+ LD   N  + DFG  A  +         C    GT 
Sbjct: 194 LLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFG--AACKLDAHPDTPQCYGWSGTL 251

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
              +PE+L+   Y  +  D+WS G++LF +    +  
Sbjct: 252 ETNSPELLALDPY-CAKTDIWSAGLVLFEMSVKNVTL 287

Length = 392

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 62.5 bits (152), Expect = 6e-11
 Identities = 71/270 (26%), Positives = 114/270 (42%), Gaps = 48/270 (17%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGES-----VAMKVLAKSTILKHRMVDQIKREISIM-KI 65
             G+T+G G F KV  A      +S     VA+K+L  +     R  + +  E+ IM  +
Sbjct: 38  SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSER--EALMSELKIMSHL 95

Query: 66  VRHPNIVRLHEVLASRTK---VYIILEFVTGGELFDKIVHQGR---LLENDCRRYFQQLI 119
             H NIV L   L + T    + +I E+   G+L +  + + R   L   D   +  Q+ 
Sbjct: 96  GNHENIVNL---LGACTIGGPILVITEYCCYGDLLN-FLRRKRESFLTLEDLLSFSYQVA 151

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV--- 176
             +A   SK   HRDL   N+LL     +K+ DFGL+       ++++ +    NYV   
Sbjct: 152 KGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR------DIMNDS----NYVVKG 201

Query: 177 ---------APEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT---LYKKI- 222
                    APE + N  Y    +DVWS G++L+ + + G  P+    +P     YK I 
Sbjct: 202 NARLPVKWMAPESIFNCVYT-FESDVWSYGILLWEIFSLGSNPY--PGMPVDSKFYKLIK 258

Query: 223 NAAEFSCPFWFSTGATSLIHKILDPNPKTR 252
                + P         ++    D +P  R
Sbjct: 259 EGYRMAQPEHAPAEIYDIMKTCWDADPLKR 288

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 62.7 bits (152), Expect = 7e-11
 Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 5/158 (3%)

Query: 59  EISIMKIVRHPNIVRLHEVLASRTKVYIIL-EFVTGGELFDKIVHQGRLLENDCRRYFQQ 117
           E  I++ + HP+I++L           +IL  + T  +L+  +  +  +   D     + 
Sbjct: 133 EAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKT--DLYCYLAAKRNIAICDILAIERS 190

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-GVELLHTTCGTPNYV 176
           ++ A+ + H   + HRD+K EN+ ++  G++ + DFG +  P        +   GT    
Sbjct: 191 VLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATN 250

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           APE+L+   Y G A D+WS G++LF +   +    E D
Sbjct: 251 APELLARDPY-GPAVDIWSAGIVLFEMATCHDSLFEKD 287

Length = 391

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 62.3 bits (151), Expect = 7e-11
 Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 30/238 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 16  KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 73

Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V   +
Sbjct: 74  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQ 133

Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      Q+   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 134 MTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYY 193

Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 194 KKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 250

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 61.7 bits (150), Expect = 9e-11
 Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 27/258 (10%)

Query: 16  TIGEGTFAKVRFAQNRETGESVAMK-VLAKSTILKHRMVDQI----KREISIMKIVRHPN 70
           T+G G F +V  A+ +   E      VL K+  L+    + +    +RE+ + + + H N
Sbjct: 12  TLGRGEFGEVFLAKAKGIEEEGGETLVLVKA--LQKTKDENLQSEFRRELDMFRKLSHKN 69

Query: 71  IVRLHEVLASRTKVYIILEFVTGGEL--FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           +VRL  +       Y+ILE+   G+L  F +   + +  +        +   A+    + 
Sbjct: 70  VVRLLGLCREAEPHYMILEYTDLGDLKQFLRA-TKSKDEKLKPPPLSTKQKVALCTQIAL 128

Query: 129 GV--------YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           G+         HRDL   N L+ S   +KVS   LS                P  ++APE
Sbjct: 129 GMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPE 188

Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGAT 238
            +    +  + +DVWS GV+++ V   G LPF       +  ++ A +   P     G  
Sbjct: 189 AVQEDDFS-TKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP--VPEGCP 245

Query: 239 SLIHKIL----DPNPKTR 252
           S ++K++      NPK R
Sbjct: 246 SRLYKLMTRCWAVNPKDR 263

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)

Query: 15  RTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE     VA+K L ++T  K     +I  E  +M  V +P+
Sbjct: 13  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 70

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 71  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR 129

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYT 189

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 190 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 221

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 61.6 bits (149), Expect = 2e-10
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 34/241 (14%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKRE 59
            +  +G+ +GEG F +V  A+         N+    +VA+K+L      K   +  +  E
Sbjct: 12  TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPV--TVAVKMLKDDATDKD--LSDLVSE 67

Query: 60  ISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGEL---------------FDKI-VH 102
           + +MK++ +H NI+ L         +Y+++E+ + G L               FD   + 
Sbjct: 68  MEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLP 127

Query: 103 QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG 162
           + +L   D      Q+   + +  S+   HRDL   N+L+     +K++DFGL+      
Sbjct: 128 EEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNI 187

Query: 163 VELLHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLY 219
                TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+
Sbjct: 188 DYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246

Query: 220 K 220
           K
Sbjct: 247 K 247

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 34/226 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFA-----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
              +G+T+GEG F KV  A     + R    +VA+K+L ++          +  E +++K
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELR--DLLSEFNLLK 58

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGEL----------------FDKIVHQGRLLE 108
            V HP++++L+   +    + +I+E+   G L                 D   +   L  
Sbjct: 59  QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 109 NDCR--------RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LP 159
            D R         +  Q+   + +     + HRDL   N+L+     +K+SDFGLS  + 
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVY 178

Query: 160 QQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
           ++   +  +    P  ++A E L +  Y  + +DVWS GV+L+ ++
Sbjct: 179 EEDSYVKRSKGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLWEIV 223

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 59.6 bits (144), Expect = 5e-10
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 30/229 (13%)

Query: 17  IGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIV 72
           IGEG F +V  A+ ++ G   ++   ++   ++   HR       E+ ++ K+  HPNI+
Sbjct: 15  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCKLGHHPNII 71

Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND----------CRRYFQQLIDAV 122
            L      R  +Y+ +E+   G L D  + + R+LE D               QQL+   
Sbjct: 72  NLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130

Query: 123 A-------HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-N 174
           A       +   K   HRDL   N+L+      K++DFGLS    Q V +  T    P  
Sbjct: 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVR 188

Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
           ++A E L+   Y  + +DVWS GV+L+ ++  G  P+       LY+K+
Sbjct: 189 WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 59.3 bits (143), Expect = 5e-10
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 15/218 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE+    VA+KVL ++T  K     +I  E  +M  V  P 
Sbjct: 13  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN--KEILDEAYVMAGVGSPY 70

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V ++ + +  G L D +  ++ R+   D   +  Q+   +++     
Sbjct: 71  VCRLLGICLTST-VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR 129

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ S  ++K++DFGL+ L        H   G  P  ++A E + +R + 
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFT 189

Query: 188 GSAADVWSCGVILFVLMA----GYLPFGETDLPTLYKK 221
              +DVWS GV ++ LM      Y      ++P L +K
Sbjct: 190 -HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK 226

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 57.8 bits (139), Expect = 2e-09
 Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 27/224 (12%)

Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE+V    A+K+L ++T  K  +  +   E  IM  + HP+
Sbjct: 13  KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPH 70

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ------GRLLENDCRRYFQQLIDAVAH 124
           +VRL  V  S T + ++ + +  G L D  VH+       +LL N C     Q+   + +
Sbjct: 71  LVRLLGVCLSPT-IQLVTQLMPHGCLLD-YVHEHKDNIGSQLLLNWC----VQIAKGMMY 124

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVL 181
              + + HRDL   N+L+ S  ++K++DFGL+ L  +G E  +   G      ++A E +
Sbjct: 125 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARL-LEGDEKEYNADGGKMPIKWMALECI 183

Query: 182 SNRGYDGSAADVWSCGVILFVLMA-GYLPFG---ETDLPTLYKK 221
             R +    +DVWS GV ++ LM  G  P+      ++P L +K
Sbjct: 184 HYRKFT-HQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK 226

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 58.4 bits (141), Expect = 2e-09
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 3/88 (3%)

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ--QGVELLHTTCGTP 173
           +QL+ A+ + H +G+ HRD+K EN+L++   ++ + DFG +   +        +   GT 
Sbjct: 267 RQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTV 326

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILF 201
           +  APEVL+   Y  S  D+WS G+++F
Sbjct: 327 DTNAPEVLAGDPYTPS-VDIWSAGLVIF 353

Length = 461

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 56.1 bits (135), Expect = 5e-09
 Identities = 52/191 (27%), Positives = 99/191 (51%), Gaps = 10/191 (5%)

Query: 17  IGEGTFAKVR--FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  V+    + +++ ++VA+K+L K+      + D++ RE ++M+ + +P IVR+
Sbjct: 3   LGSGNFGTVKKGMYKMKKSEKTVAVKIL-KNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
             +  + + + +++E    G L +K + + + + E +      Q+   + +       HR
Sbjct: 62  IGICEAESWM-LVMELAELGPL-NKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHR 119

Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT-P-NYVAPEVLSNRGYDGSA 190
           DL   N+LL +    K+SDFGLS AL          T G  P  + APE ++   +  S 
Sbjct: 120 DLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFS-SK 178

Query: 191 ADVWSCGVILF 201
           +DVWS GV+++
Sbjct: 179 SDVWSFGVLMW 189

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 56.2 bits (136), Expect = 7e-09
 Identities = 49/242 (20%), Positives = 101/242 (41%), Gaps = 50/242 (20%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL---AKSTILKHRMVDQIKREISIMKIVR 67
             +G+   +     V  A+++ T   VA+K +   + S       +  +++EI   + ++
Sbjct: 4   TLIGKCFEDLMI--VHLAKHKPTNTLVAVKKINLDSCS----KEDLKLLQQEIITSRQLQ 57

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDC---------RRYFQQL 118
           HPNI+         +++Y++   +  G   D       LL+                + +
Sbjct: 58  HPNILPYVTSFIVDSELYVVSPLMAYGSCED-------LLKTHFPEGLPELAIAFILKDV 110

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA--------------LPQQGVE 164
           ++A+ + HSKG  HR +K  ++LL   G + +S    S                P+  V+
Sbjct: 111 LNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170

Query: 165 LLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY-KK 221
            L        +++PEVL    +GY+   +D++S G+    L  G++PF +     +  +K
Sbjct: 171 NL-------PWLSPEVLQQNLQGYN-EKSDIYSVGITACELANGHVPFKDMPATQMLLEK 222

Query: 222 IN 223
           + 
Sbjct: 223 VR 224

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 12/222 (5%)

Query: 17  IGEGTFAKVR--FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  V+    + R+    VA+KVL      +  + D++ RE  IM  + +P IVR+
Sbjct: 3   LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRM 60

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
             V  +   + +++E  +GG L   +   +  +  ++      Q+   + +   K   HR
Sbjct: 61  IGVCEAEA-LMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHR 119

Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT-P-NYVAPEVLSNRGYDGSA 190
           DL   N+LL +    K+SDFGLS AL          + G  P  + APE ++ R +  S 
Sbjct: 120 DLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFS-SR 178

Query: 191 ADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAE-FSCP 230
           +DVWS G+ ++     G  P+ +   P +   I   +   CP
Sbjct: 179 SDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP 220

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 55.2 bits (133), Expect = 1e-08
 Identities = 62/254 (24%), Positives = 105/254 (41%), Gaps = 48/254 (18%)

Query: 15  RTIGEGTFAKVRFAQNRETG-------ESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           R IG+G F +V   Q R  G         VA+K+L +       M    +RE ++M    
Sbjct: 11  RDIGQGAFGRV--FQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALMAEFD 66

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQ---- 116
           HPNIV+L  V A    + ++ E++  G+L +       +         +  R+       
Sbjct: 67  HPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLP 126

Query: 117 -----------QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
                      Q+   +A+   +   HRDL   N L+     +K++DFGLS    + +  
Sbjct: 127 LSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS----RNIYS 182

Query: 166 LHTTCGTPN------YVAPE-VLSNRGYDGSAADVWSCGVILFVLMA-GYLP-FGETDLP 216
                 + N      ++ PE +  NR Y  + +DVW+ GV+L+ + + G  P +G     
Sbjct: 183 ADYYKASENDAIPIRWMPPESIFYNR-YT-TESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240

Query: 217 TLYKKINAAEFSCP 230
            +Y   +    SCP
Sbjct: 241 VIYYVRDGNVLSCP 254

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 55/215 (25%), Positives = 103/215 (47%), Gaps = 32/215 (14%)

Query: 10  KYEVGRTIGEGTFAKVR--FAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V    A++   GE+   VA+K + +S  L+ R+  +   E S+MK
Sbjct: 7   KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMK 64

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELF--------DKIVHQGRLLENDCRRYFQ 116
                ++VRL  V++      +++E +  G+L         +   + GR      +   Q
Sbjct: 65  GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT-LQEMIQ 123

Query: 117 ---QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELL 166
              ++ D +A+ ++K   HRDL   N ++     +K+ DFG++          + G  LL
Sbjct: 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLL 183

Query: 167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                   ++APE L + G   +++D+WS GV+L+
Sbjct: 184 PV-----RWMAPESLKD-GVFTTSSDMWSFGVVLW 212

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 38/224 (16%)

Query: 15  RTIGEGTFAKVRFAQNRE-----TGES-VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
             +G G F +V      +     +G   VA+K L K    + +   +  +E  +M    H
Sbjct: 1   NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKK--EFLKEAHLMSNFNH 58

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFD------KIVHQGRLLENDCRRYFQQLIDAV 122
           PNIV+L  V       YII+E + GG+L               LL    +      +D  
Sbjct: 59  PNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLT--LKELLDICLDVA 116

Query: 123 AHCH---SKGVYHRDLKPENLLLDSYGN-----LKVSDFGLSA-------LPQQGVELLH 167
             C         HRDL   N L+   G      +K+ DFGL+          ++G  LL 
Sbjct: 117 KGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLP 176

Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
                  ++APE L + G   + +DVWS GV+++ +L  G  P+
Sbjct: 177 V-----RWMAPESLLD-GKFTTQSDVWSFGVLMWEILTLGQQPY 214

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 19/203 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVA---MKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           IG G F KV        G S A   +K L  S     ++     +E+   + + HPN+++
Sbjct: 3   IGNGWFGKV-LLGEAHRGMSKARVVVKELRASATPDEQL--LFLQEVQPYRELNHPNVLQ 59

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQ-----LIDAVAHCHSK 128
                       ++LEF   G+L + +     ++    ++   Q     +   +   H  
Sbjct: 60  CLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGL--SALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
              H DL   N  L +  ++K+ D+GL     P+              ++APE++  RG 
Sbjct: 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQ 179

Query: 187 DGSAAD------VWSCGVILFVL 203
           D    D      +WS GV ++ L
Sbjct: 180 DLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 53.6 bits (129), Expect = 4e-08
 Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 23/215 (10%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           R IG+G F  V       +       A+K L + T L+   V+Q  +E  IMK   HPN+
Sbjct: 1   RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEE--VEQFLKEGIIMKDFSHPNV 58

Query: 72  VRLHEV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKG 129
           + L  + L S     ++L ++  G+L + I  +       D   +  Q+   + +  SK 
Sbjct: 59  LSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK 118

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--------LPQQGVELLHTTCGTP-NYVAPEV 180
             HRDL   N +LD    +KV+DFGL+                  HT    P  ++A E 
Sbjct: 119 FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN-----HTGAKLPVKWMALES 173

Query: 181 LSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETD 214
           L  + +  + +DVWS GV+L+ LM  G  P+ + D
Sbjct: 174 LQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVD 207

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 52.7 bits (126), Expect = 8e-08
 Identities = 52/214 (24%), Positives = 100/214 (46%), Gaps = 30/214 (14%)

Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 7   KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 64

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+        ++  Q 
Sbjct: 65  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQM 124

Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 125 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 184

Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 185 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 212

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 53.0 bits (127), Expect = 9e-08
 Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 27/219 (12%)

Query: 17  IGEG--TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           IG G      V  A+ + TGE V ++ +       + MV  ++ E+ + K+  HPNIV  
Sbjct: 6   IGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPY 64

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
                +  +++++  F+  G   D I       + E       Q ++ A+ + H  G  H
Sbjct: 65  RATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVH 124

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQ-----QGVELLHTTCGTPNY-------VAPEV 180
           R +K  ++L+   G + +S  GL +        Q + ++H     P Y       ++PEV
Sbjct: 125 RSVKASHILISVDGKVYLS--GLRSNLSMINHGQRLRVVHD---FPKYSVKVLPWLSPEV 179

Query: 181 LSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT 217
           L    +GYD + +D++S G+    L  G++PF   D+P 
Sbjct: 180 LQQNLQGYD-AKSDIYSVGITACELANGHVPF--KDMPA 215

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 39/172 (22%), Positives = 65/172 (37%), Gaps = 29/172 (16%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGES----------------VAMKVLAKSTILKHRMVDQ 55
                +GEG F +V   +     +                 VA+KVL       +   D 
Sbjct: 8   NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDF 66

Query: 56  IKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL----------FDKIVHQGR 105
           +K E+ I+  +  PNI RL  V      + +I+E++  G+L             +    +
Sbjct: 67  LK-EVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSK 125

Query: 106 LLENDCRRYF-QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS 156
            L      Y   Q+   + +  S    HRDL   N L+     +K++DFG+S
Sbjct: 126 SLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMS 177

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 51.3 bits (123), Expect = 3e-07
 Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 34/213 (15%)

Query: 15  RTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +GEG F KV        +     E VA+K L ++     R     +RE  ++   +H 
Sbjct: 11  RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDAR--KDFEREAELLTNFQHE 68

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGEL----------FDKIVHQ----GRLLENDCRRYF 115
           NIV+ + V        ++ E++  G+L             +       G L  +   +  
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLHT 168
            Q+   + +  S+   HRDL   N L+     +K+ DFG+S            G  +L  
Sbjct: 129 VQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPI 188

Query: 169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                 ++ PE +  R +  + +DVWS GV+L+
Sbjct: 189 -----RWMPPESIMYRKFT-TESDVWSFGVVLW 215

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 27/210 (12%)

Query: 15  RTIGEGTFAKVRFAQNRETGES-----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +GEG F KV  A+      +     VA+K L   T+   +     +RE  ++  ++H 
Sbjct: 11  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK---DFQREAELLTNLQHE 67

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFD---------KIVHQGRLLENDCRRYFQQLID 120
           +IV+ + V      + ++ E++  G+L            I+  G+  +        Q++ 
Sbjct: 68  HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 127

Query: 121 AVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCG 171
             +   S  VY       HRDL   N L+ +   +K+ DFG+S          +   T  
Sbjct: 128 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 187

Query: 172 TPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
              ++ PE +  R +  + +DVWS GVIL+
Sbjct: 188 PIRWMPPESIMYRKFT-TESDVWSFGVILW 216

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 52/219 (23%), Positives = 97/219 (44%), Gaps = 15/219 (6%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS----IMKIVRHP 69
            + +G G F  V        G+S+ + V  K   ++ R   Q  +EI+     M  + H 
Sbjct: 12  LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIK--TIQDRSGRQTFQEITDHMLAMGSLDHA 69

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
            IVRL  +      + ++ +    G L D +  H+  L       +  Q+   + +    
Sbjct: 70  YIVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH 128

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
            + HR+L   N+LL S   ++++DFG++  L     +  ++   TP  ++A E +    Y
Sbjct: 129 RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRY 188

Query: 187 DGSAADVWSCGVILFVLMA-GYLPFGET---DLPTLYKK 221
               +DVWS GV ++ +M+ G  P+      ++P L +K
Sbjct: 189 T-HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK 226

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 50.4 bits (120), Expect = 6e-07
 Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 28/166 (16%)

Query: 17  IGEGTFAKVRFAQ------------NRETGES--VAMKVLAKSTILKHRMVDQIKREISI 62
           +GEG F +V   +                G+   VA+K+L ++ + K    D +K EI I
Sbjct: 13  LGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKML-RADVTKTARNDFLK-EIKI 70

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGG---------ELFDKIVHQGRLLE---ND 110
           M  +++PNI+RL  V  S   + +I E++  G         E+     H   +      +
Sbjct: 71  MSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIAN 130

Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS 156
                 Q+   + +  S    HRDL   N L+ ++  +K++DFG+S
Sbjct: 131 LLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMS 176

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 43/234 (18%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKR----EISIMKI 65
           ++++   +GEGTF KV  A +R+  E  A+K++        R V +  R    EI  M+ 
Sbjct: 130 RFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIV--------RNVPKYTRDAKIEIQFMEK 181

Query: 66  VRHPN------IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           VR  +      ++++     + T    I+    G  L D I+  G        R+  Q+I
Sbjct: 182 VRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPF----SHRHLAQII 237

Query: 120 ----DAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL----LHTTC 170
                A+ + H++  + H DLKPEN+L+++  +  V      ALP     +    L   C
Sbjct: 238 FQTGVALDYFHTELHLMHTDLKPENILMET-SDTVVDPVTNRALPPDPCRVRICDLGGCC 296

Query: 171 ----------GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
                      T +Y +PEV+   G+  S  D+WS G I++ L  G L +   D
Sbjct: 297 DERHSRTAIVSTRHYRSPEVVLGLGWMYS-TDMWSMGCIIYELYTGKLLYDTHD 349

Length = 467

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 49.2 bits (117), Expect = 1e-06
 Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)

Query: 17  IGEGTFAKVR----FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           +GE  F K+     +    +  + VA+K L      +     + ++E S+M  + HPNIV
Sbjct: 13  LGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQW--GEFQQEASLMAELHHPNIV 70

Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVH-----------------QGRLLENDCRRYF 115
            L  V+     V ++ E++  G+L + ++                  +  L   D     
Sbjct: 71  CLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIA 130

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP- 173
            Q+   + +  S    H+DL   N+L+    ++K+SD GLS  +       +      P 
Sbjct: 131 IQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPI 190

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
            ++ PE +    +  S +D+WS GV+L+ + + G  P+
Sbjct: 191 RWMPPEAIMYGKFS-SDSDIWSFGVVLWEIFSFGLQPY 227

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 24/207 (11%)

Query: 15  RTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +GEG F KV  A+       +    VA+K L  ++    +      RE  ++  ++H 
Sbjct: 11  RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK---DFHREAELLTNLQHE 67

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-------------RLLENDCRRYFQ 116
           +IV+ + V      + ++ E++  G+L   +   G              L ++      Q
Sbjct: 68  HIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ 127

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPN 174
           Q+   + +  S+   HRDL   N L+     +K+ DFG+S          +   T     
Sbjct: 128 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 187

Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILF 201
           ++ PE +  R +  + +DVWS GV+L+
Sbjct: 188 WMPPESIMYRKFT-TESDVWSLGVVLW 213

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 47.5 bits (113), Expect = 8e-06
 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 10/74 (13%)

Query: 112 RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGV-----EL 165
           +   +Q++ A+   HS G+ HRD+KP+N++     G+ K+ D G +A  + G+     E 
Sbjct: 258 QTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEF 317

Query: 166 LHTTCGTPNYVAPE 179
           L      P Y APE
Sbjct: 318 LL----DPRYAAPE 327

Length = 566

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 47.6 bits (113), Expect = 9e-06
 Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP 230
           GTP+Y+APE+L  + + G A D W+ GV LF  + G  PF +     +++ I   +   P
Sbjct: 542 GTPDYLAPELLLGKPH-GPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP 600

Query: 231 FW---FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
                 S  A + I  +L  +P  R  ++ +++HP F
Sbjct: 601 EGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLF 637

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 46.2 bits (109), Expect = 2e-05
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 89  EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNL 148
           EF+  G+     + Q +   N  +   +Q++  +   H  G+ HRD+KPENLL+   G +
Sbjct: 289 EFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQV 348

Query: 149 KVSDFGLSALPQQGVEL--LHTTCGTPNYVAPEVL 181
           K+ DFG +     G+    L+     P Y  PE L
Sbjct: 349 KIIDFGAAVDMCTGINFNPLYGML-DPRYSPPEEL 382

Length = 507

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 31/211 (14%)

Query: 16  TIGEGTFAKVRFAQNRETGE-------SVAMKVLAKSTILKHRMVDQIKRE-ISIMKIVR 67
           ++G+GTF K+     RE G+        V +KVL KS    HR   +   E  S+M  + 
Sbjct: 2   SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS----HRNYSESFFEAASMMSQLS 57

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY--FQQLIDAVAHC 125
           H ++V  + V     +  ++ E+V  G L D  + + + L N   +    +QL  A+   
Sbjct: 58  HKHLVLNYGVCVCGDESIMVQEYVKFGSL-DTYLKKNKNLINISWKLEVAKQLAWALHFL 116

Query: 126 HSKGVYHRDLKPENLLL-----DSYGN---LKVSDFGLS--ALPQQGVELLHTTCGTPNY 175
             KG+ H ++  +N+LL        GN   +K+SD G+S   LP+   E+L      P +
Sbjct: 117 EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK---EIL--LERIP-W 170

Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
           V PE + N      AAD WS G  L+ + +G
Sbjct: 171 VPPECIENPQNLSLAADKWSFGTTLWEIFSG 201

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 45.2 bits (107), Expect = 2e-05
 Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 20/203 (9%)

Query: 17  IGEGTFAKVRFAQNRETGESVA---MKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           IG G F KV  ++   T   VA   +K L  +   K +  ++  ++    +I++HPNI++
Sbjct: 3   IGNGWFGKVLLSE-IYTDTGVARVVVKELKANASSKEQ--NEFLQQGDPYRILQHPNILQ 59

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQL---IDA-VAHCHSKG 129
                       ++ E+   G+L   +  +     N      Q++   I A V H H   
Sbjct: 60  CLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN 119

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGL--SALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             H DL   N  L S   +KV D+G+  S   +  +E     C    ++APE++    + 
Sbjct: 120 FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEF-HG 178

Query: 188 G-------SAADVWSCGVILFVL 203
           G         ++VW+ GV L+ L
Sbjct: 179 GLITAEQTKPSNVWALGVTLWEL 201

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 44.6 bits (105), Expect = 4e-05
 Identities = 52/218 (23%), Positives = 89/218 (40%), Gaps = 27/218 (12%)

Query: 17  IGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           +GE  F KV           E  ++VA+K L        R  ++ K E  +   ++HPNI
Sbjct: 13  LGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLR--EEFKHEAMMRSRLQHPNI 70

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRLLENDCRRYF 115
           V L  V+     + +I  + +  +L + +V                 +  L   D     
Sbjct: 71  VCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL--SALPQQGVELLHTTCGTP 173
            Q+   +    S  V H+DL   N+L+    N+K+SD GL          +L+  +    
Sbjct: 131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPI 190

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
            +++PE +   G     +D+WS GV+L+ V   G  P+
Sbjct: 191 RWMSPEAIM-YGKFSIDSDIWSYGVVLWEVFSYGLQPY 227

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 32/217 (14%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           V K+E    +GEG F KV  A+       +    VA+K L +++          +RE  +
Sbjct: 8   VLKWE----LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAEL 60

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFD---------KIVHQGRLLENDCRR 113
           + +++H +IVR + V      + ++ E++  G+L           KI+  G  +    + 
Sbjct: 61  LTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPG-QL 119

Query: 114 YFQQLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVE 164
              Q++   +   S  VY       HRDL   N L+     +K+ DFG+S          
Sbjct: 120 TLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR 179

Query: 165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
           +   T     ++ PE +  R +  + +D+WS GV+L+
Sbjct: 180 VGGRTMLPIRWMPPESILYRKFT-TESDIWSFGVVLW 215

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)

Query: 37  VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL 96
           VA+K+L +    K+   D +K EI IM  ++ PNI+RL  V  +   + +I E++  G+L
Sbjct: 49  VAVKML-REDANKNARNDFLK-EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDL 106

Query: 97  ---FDKIVHQGRLLENDCRRY-FQQLIDAVAHCHSKGVY-------HRDLKPENLLLDSY 145
                +   Q    + D     +  LI       S   Y       HRDL   N L+   
Sbjct: 107 NQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKN 166

Query: 146 GNLKVSDFGLS 156
             +K++DFG+S
Sbjct: 167 YTIKIADFGMS 177

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 17/133 (12%)

Query: 31  RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIV-RLHEVLASRTKVYIIL 88
               E   +K+         R     +RE++I++++      V ++     S    Y+++
Sbjct: 18  GTKDEDYVLKINPSREKGADR-----EREVAILQLLARKGLPVPKVLASGESDGWSYLLM 72

Query: 89  EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY---HRDLKPENLLLDSY 145
           E++ G  L         + E +     +QL + +A  H   +    H DL P N+L+D  
Sbjct: 73  EWIEGETL-------DEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG 125

Query: 146 GNLKVSDFGLSAL 158
             L + D+  +  
Sbjct: 126 KILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 21/182 (11%)

Query: 33  TGESVAMKVLAKSTILKHRMVDQIKREI-SIMKIVRHPNIVRLHEVLASRTKVYIILEFV 91
                 +KV+ K     HR +     E  S+M+ V H +IV L+ V     +  ++ EFV
Sbjct: 27  YSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFV 86

Query: 92  TGGELFDKIVH-QGRLLENDCR-RYFQQLIDAVAHCHSKGVYHRDLKPENLLL-----DS 144
             G L D  +H +  +L    + +  +QL  A+++   K + H ++  +N+LL     D 
Sbjct: 87  EFGPL-DLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG 145

Query: 145 YGN--LKVSDFG--LSALP-QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVI 199
                +K+SD G  ++ L  Q+ VE +        ++APE + +      AAD WS G  
Sbjct: 146 ECGPFIKLSDPGIPITVLSRQECVERI-------PWIAPECVEDSKNLSIAADKWSFGTT 198

Query: 200 LF 201
           L+
Sbjct: 199 LW 200

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 22/159 (13%)

Query: 59  EISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQL 118
           EI+ M  ++HPNIV+L  +  S    Y+I E++ G  L         +L N      +++
Sbjct: 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL-------SEVLRNLSWERRRKI 785

Query: 119 IDAVA------HCH-SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG 171
              +A      HC  S  V   +L PE +++D        D     L   G+    T C 
Sbjct: 786 AIGIAKALRFLHCRCSPAVVVGNLSPEKIIID------GKDEPHLRLSLPGLLCTDTKCF 839

Query: 172 TPN-YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLP 209
             + YVAPE    +      +D++  G+IL  L+ G  P
Sbjct: 840 ISSAYVAPETRETKDIT-EKSDIYGFGLILIELLTGKSP 877

Length = 968

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 23/87 (26%)

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---------- 176
           S+   HRDL   N+LL     +K+ DFGL+                P+YV          
Sbjct: 191 SRKCIHRDLAARNILLSENNVVKICDFGLA----------RDIYKDPDYVRKGDARLPLK 240

Query: 177 --APEVLSNRGYDGSAADVWSCGVILF 201
             APE + ++ Y  + +DVWS GV+L+
Sbjct: 241 WMAPESIFDKVYT-TQSDVWSFGVLLW 266

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.3 bits (97), Expect = 4e-04
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 34/209 (16%)

Query: 15  RTIGEGTFAKVRFAQNRETGE----------SVAMKVLAKSTILKHRMVDQIKREISIMK 64
             +G+GTF  +     R   +          SV +KVL       HR         S+M 
Sbjct: 1   EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGS----DHRDSLAFFETASLMS 56

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYF-QQLIDAV 122
            + H ++V+L+ V   R +  ++ E+V  G L D  +H +   +    +    +QL  A+
Sbjct: 57  QLSHKHLVKLYGVCV-RDENIMVEEYVKFGPL-DVFLHREKNNVSLHWKLDVAKQLASAL 114

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGN-------LKVSDFG--LSALPQQGVELLHTTCGTP 173
            +   K + H ++  +N+L+  YG        +K+SD G  ++ L ++           P
Sbjct: 115 HYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVE-----RIP 169

Query: 174 NYVAPEVLSN-RGYDGSAADVWSCGVILF 201
            ++APE + N +     AAD WS G  L 
Sbjct: 170 -WIAPECIRNGQASLTIAADKWSFGTTLL 197

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 41.5 bits (97), Expect = 5e-04
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 25/134 (18%)

Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           L   D   +  Q+   +    SK   HRDL   N+LL     +K+ DFGL+       ++
Sbjct: 234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR------DI 287

Query: 166 LHTTCGTPNYV------------APEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF-G 211
           +H +    NYV            APE + +  Y  + +DVWS G++L+ + + G  P+ G
Sbjct: 288 MHDS----NYVSKGSTFLPVKWMAPESIFDNLYT-TLSDVWSYGILLWEIFSLGGTPYPG 342

Query: 212 ETDLPTLYKKINAA 225
                T Y KI + 
Sbjct: 343 MIVDSTFYNKIKSG 356

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 41.1 bits (96), Expect = 5e-04
 Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 35/220 (15%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           E+GR  G      V  A++  TG  V +++       +  +   ++ E+ +    RHPNI
Sbjct: 5   EIGR--GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHL-KALQNEVVLSHFFRHPNI 61

Query: 72  VRLHEVLASRTKVYIILEFVTGG---ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           +    V  + + +++I  F+  G    L      +G + E          +  + + H  
Sbjct: 62  MTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEG-MSEALIGNILFGALRGLNYLHQN 120

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSAL----------------PQQGVELLHTTCGT 172
           G  HR++K  ++L+   G + +S  GLS L                PQ    +L      
Sbjct: 121 GYIHRNIKASHILISGDGLVSLS--GLSHLYSLVRNGQKAKVVYDFPQFSTSVL------ 172

Query: 173 PNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPF 210
             +++PE+L     GY+   +D++S G+    L  G +PF
Sbjct: 173 -PWLSPELLRQDLYGYN-VKSDIYSVGITACELATGRVPF 210

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 41.1 bits (96), Expect = 6e-04
 Identities = 64/257 (24%), Positives = 105/257 (40%), Gaps = 58/257 (22%)

Query: 17  IGEGTFAKV--------------RFAQNRETGES--VAMKVLAKSTILKHRMVDQIKREI 60
           +GEG F +V              +F  N   G    VA+K+L +    K+   D +K E+
Sbjct: 13  LGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKIL-RPDANKNARNDFLK-EV 70

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY------ 114
            I+  ++ PNI+RL  V      + +I E++  G+L   +     L + +          
Sbjct: 71  KILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSH-HLDDKEENGNDAVPPA 129

Query: 115 -------FQQLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSA--- 157
                  +  L+       S   Y       HRDL   N L+     +K++DFG+S    
Sbjct: 130 HCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY 189

Query: 158 ----LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF--VLMAGYLPFG 211
                  QG  +L        ++A E +   G   +A+DVW+ GV L+  +++    P+G
Sbjct: 190 AGDYYRIQGRAVLPI-----RWMAWECIL-MGKFTTASDVWAFGVTLWEILMLCKEQPYG 243

Query: 212 E-TDLPTLYKKINAAEF 227
           E TD   +    NA EF
Sbjct: 244 ELTDEQVIE---NAGEF 257

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 23/87 (26%)

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---------- 176
           S+   HRDL   N+LL     +K+ DFGL+                P+YV          
Sbjct: 197 SRKCIHRDLAARNILLSENNVVKICDFGLA----------RDIYKDPDYVRKGDARLPLK 246

Query: 177 --APEVLSNRGYDGSAADVWSCGVILF 201
             APE + +R Y    +DVWS GV+L+
Sbjct: 247 WMAPETIFDRVYT-IQSDVWSFGVLLW 272

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 23/87 (26%)

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---------- 176
           S+   HRDL   N+LL     +K+ DFGL+                P+YV          
Sbjct: 192 SRKCIHRDLAARNILLSENNVVKICDFGLA----------RDIYKDPDYVRKGSARLPLK 241

Query: 177 --APEVLSNRGYDGSAADVWSCGVILF 201
             APE + ++ Y  + +DVWS GV+L+
Sbjct: 242 WMAPESIFDKVYT-TQSDVWSFGVLLW 267

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	379
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	100.0
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.98
PLN00181	793	protein SPA1-RELATED; Provisional	99.97
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
PRK09188	365	serine/threonine protein kinase; Provisional	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.95
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.94
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.94
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.93
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.92
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.92
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.92
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.91
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.91
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.9
PRK12274	218	serine/threonine protein kinase; Provisional	99.9
PRK10345	210	hypothetical protein; Provisional	99.89
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.88
smart00090	237	RIO RIO-like kinase.	99.87
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.87
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.85
PRK14879	211	serine/threonine protein kinase; Provisional	99.84
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.82
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.82
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.8
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.8
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.79
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.74
PF03822	63	NAF: NAF domain; InterPro: IPR004041 The NAF domai	99.73
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.71
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.66
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.64
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.61
KOG1243	690	consensus Protein kinase [General function predict	99.58
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.57
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.55
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.54
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.49
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.36
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.3
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.26
KOG3087	229	consensus Serine/threonine protein kinase [General	99.23
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.13
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.11
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.09
COG4248	637	Uncharacterized protein with protein kinase and he	99.05
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.98
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.92
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.77
PRK09902	216	hypothetical protein; Provisional	98.75
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.68
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.66
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.62
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.6
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.59
PF01636	239	APH: Phosphotransferase enzyme family This family	98.5
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.35
PLN02876	822	acyl-CoA dehydrogenase	98.31
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.22
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.19
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.18
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	98.16
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.16
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.07
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.87
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.83
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.79
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.73
PRK10593	297	hypothetical protein; Provisional	97.68
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.62
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.6
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.59
KOG2270	520	consensus Serine/threonine protein kinase involved	97.58
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.58
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.47
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.34
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.33
PRK05231	319	homoserine kinase; Provisional	97.28
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.06
PLN02756	418	S-methyl-5-thioribose kinase	96.93
PLN02236	344	choline kinase	96.91
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.87
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.62
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	96.03
PRK12396	409	5-methylribose kinase; Reviewed	95.98
PTZ00384	383	choline kinase; Provisional	95.95
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.94
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.79
PRK11768	325	serine/threonine protein kinase; Provisional	95.65
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.49
PRK10271	188	thiK thiamine kinase; Provisional	94.02
PTZ00296	442	choline kinase; Provisional	93.0
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	92.82
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	92.63

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-66  Score=494.59  Aligned_cols=338  Identities=49%  Similarity=0.859  Sum_probs=279.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc--hHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVR-HPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~   82 (379)
                      ...++|.+++.||+|+||+|++|.+..+|..||||++++.....  ....+.+.+|+.+++.++ ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            67889999999999999999999999999999999887753321  134577889999999999 999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~~~~~  161 (379)
                      .+|+|||||.||+|++++.+.+++.|.+++.+|+||++||+|||++||+||||||||||+|.+ +++||+|||++.....
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~  173 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG  173 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence            999999999999999999999999999999999999999999999999999999999999999 9999999999998854


Q ss_pred             CcccccccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCC-CHhHHH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF-STGATS  239 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~-s~~~~~  239 (379)
                      ....+.+.|||+.|+|||++.+.+ |.+.++|||||||+||.|++|+.||++.+...++.+|..+.+.+|.++ |+++.+
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~~  253 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEARS  253 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHHH
Confidence            557889999999999999999988 999999999999999999999999999999999999999999999999 999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCccccc-cCCCCCCccccccC----cccccccccchhh---HHHHhhhcccCCCCcccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRK-NYNPVKCSEEEEVN----LDDVHAVFDDIED---QYVAEQSENKVGGPLLMN  311 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  311 (379)
                      ||++||.+||.+|+|+.+|+.||||+. ...+..+.......    ..+......+.+.   ......... ...+...+
T Consensus       254 Li~~mL~~~P~~R~t~~~i~~h~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  332 (370)
T KOG0583|consen  254 LIEKMLVPDPSTRITLLEILEHPWFQKENPLPSDELPSEVAPSAPSAPSAKDSVSPVETEDEKPLSPTSTP-ESLPLSLN  332 (370)
T ss_pred             HHHHHcCCCcccCCCHHHHhhChhhccCCCCCccccccccccccccccccccccccccccccccccccccc-cccccccC
Confidence            999999999999999999999999998 44333211111100    0000000000000   000000000 01355678


Q ss_pred             ccceec-cCcCC--CchhhhhhhhhccccccceeecCC
Q 016991          312 AFEMIT-LSQGL--NLAALFDRRQDYVKRQTRFVSRQP  346 (379)
Q Consensus       312 ~~~~~~-~s~~~--~~~~l~~~~~~~~~~~~rf~~~~~  346 (379)
                      +++.++ ++++.  +++++|+....  ++..+|.+..+
T Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  368 (370)
T KOG0583|consen  333 AYDLGSSLSTGINEALSGLFENEKE--KEEPRFASLTS  368 (370)
T ss_pred             hhhhccccccccccccccccccccc--chhhhhhhccc
Confidence            888877 88888  88898875432  56667766543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.8e-66  Score=475.59  Aligned_cols=261  Identities=38%  Similarity=0.691  Sum_probs=235.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH----HHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR----MVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~----~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..-+.|.+.+.||.|+||.|.+|..+.||+.||||++++.......    ....+.+|+++|++|+|||||+++++|...
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            3456788999999999999999999999999999999987654321    234478999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeEEeeeccccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSAL  158 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lkl~DfGl~~~  158 (379)
                      +..|+||||++||+|++++..++.+.|+..+.+++|++.||.|||++||+||||||+|||+..+   -.+||+|||+|.+
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            9999999999999999999999999999999999999999999999999999999999999876   5799999999998


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcccCCC--CC-
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGY--DGSAADVWSCGVILFVLMAGYLPFGETDLPT-LYKKINAAEFSCP--FW-  232 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~p--~~-  232 (379)
                      ... ...+.+.||||.|+|||++.+.++  ++.++||||||||||.+|+|.+||.+..... +.+.|..+.|.+-  .| 
T Consensus       329 ~g~-~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~  407 (475)
T KOG0615|consen  329 SGE-GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD  407 (475)
T ss_pred             ccc-ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh
Confidence            774 467889999999999999987653  4468999999999999999999998776554 9999999988753  34 


Q ss_pred             -CCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          233 -FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       233 -~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                       +|.++++||++||..||++|||++|+|+||||+..
T Consensus       408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  408 RISEEALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence             79999999999999999999999999999999853

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.3e-65  Score=492.57  Aligned_cols=265  Identities=43%  Similarity=0.817  Sum_probs=251.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ....+|-|+++++||.|+-|.|.+|.+..||+.+|||++.+..-........+.+||-+|+.+.||||+++|++|+++.+
T Consensus         7 ~~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~   86 (786)
T KOG0588|consen    7 HKNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH   86 (786)
T ss_pred             ccccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence            34678999999999999999999999999999999999988744444456779999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+|.||++||+|++++..+|+++|.++.++|+||+.|+.|||..+|+||||||||+|||..+++||+|||+|.+... .
T Consensus        87 lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~-g  165 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP-G  165 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC-C
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999987554 4


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ..+.+.||+|.|.|||++.+..|+|.++||||||||||.||+|.+||++.+...++.+++.+.|..|..+|+++++||++
T Consensus       166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLLr~  245 (786)
T KOG0588|consen  166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLLRR  245 (786)
T ss_pred             ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHHHH
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCChHhHhcCccccccCC
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      ||+.||.+|+|.+||++|||+.+...
T Consensus       246 ml~VDp~~RiT~~eI~kHP~l~g~~~  271 (786)
T KOG0588|consen  246 MLDVDPSTRITTEEILKHPFLSGYTS  271 (786)
T ss_pred             HhccCccccccHHHHhhCchhhcCCC
Confidence            99999999999999999999987543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.1e-64  Score=484.97  Aligned_cols=263  Identities=36%  Similarity=0.676  Sum_probs=251.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|+.++.||+|+|+.||.+++..+|+.||+|++.+....+....+.+.+||++++.|+|||||+++++|++.+++|+|+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            46999999999999999999999999999999999988888888899999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |+|+.++|..++.+.+.++|.+++.+++||+.||.|||+++|+|||||..|++++++-++||+|||||+....+.+.-.+
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~T  177 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKT  177 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999988876677789


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .||||.|.|||++...++ +..+||||+||+||.||.|++||...+..+.+++|...++.+|..+|.++.+||.+||++|
T Consensus       178 lCGTPNYIAPEVl~k~gH-sfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~  256 (592)
T KOG0575|consen  178 LCGTPNYIAPEVLNKSGH-SFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPN  256 (592)
T ss_pred             ecCCCcccChhHhccCCC-CCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCC
Confidence            999999999999987776 5999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCChHhHhcCccccccCCCCC
Q 016991          249 PKTRIRIEGIRKHPWFRKNYNPVK  272 (379)
Q Consensus       249 P~~R~s~~~il~hp~f~~~~~~~~  272 (379)
                      |.+|||+++++.|+||...+.|..
T Consensus       257 P~~Rpsl~~vL~h~Ff~~g~~p~~  280 (592)
T KOG0575|consen  257 PSERPSLDEVLDHPFFKSGFTPAR  280 (592)
T ss_pred             cccCCCHHHHhcCHhhhCCCcCCC
Confidence            999999999999999977766543

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-63  Score=453.60  Aligned_cols=261  Identities=38%  Similarity=0.710  Sum_probs=247.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++++.||+|+||+|++++.++|++.||+|+++|..+......+....|..+|..++||.||+++..|++.+++
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            35678999999999999999999999999999999999999888887889999999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+|+||+.||+|+.+|++.+.++|..++.|+.+|+.||.|||+.||+||||||||||+|.+|+++|+|||+|+.......
T Consensus       101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999997766666


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-CCCCCCHhHHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHK  243 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~  243 (379)
                      ..++.|||+.|+|||++.+.+|+ ..+|+||||+++|+|++|.+||.+.+....+++|...... .|..+|+++++||++
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~-~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~  259 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYD-KAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKK  259 (357)
T ss_pred             ccccccCCccccChHHHhcCCCC-cccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHH
Confidence            77889999999999999999886 9999999999999999999999999999999999999944 455599999999999


Q ss_pred             ccCCCCCCCC----ChHhHhcCccccc
Q 016991          244 ILDPNPKTRI----RIEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~----s~~~il~hp~f~~  266 (379)
                      +|..||++|.    ++.+|.+||||..
T Consensus       260 LL~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  260 LLKRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             HhccCHHHhcCCCCChHHhhcCccccc
Confidence            9999999996    6899999999975

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-62  Score=433.31  Aligned_cols=257  Identities=36%  Similarity=0.718  Sum_probs=246.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+.+|++.++||.|+||.|.+++.+.+|..||+|++++..+.+...++...+|..+|+.+.||+++++++.+.+.+.+|
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            67889999999999999999999999999999999999999988888999999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||++||+|+.++++.+++++..++.|+.||+.||+|||+++|++|||||||||+|.+|++||+|||++.....   .
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~---r  197 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG---R  197 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC---c
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999986553   3


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHcc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  245 (379)
                      ..+.||||.|+|||++..++|. .++|+|||||++|||++|++||.+.+...+|++|..+++.+|..+|+++++||+++|
T Consensus       198 T~TlCGTPeYLAPEii~sk~yn-kavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL  276 (355)
T KOG0616|consen  198 TWTLCGTPEYLAPEIIQSKGYN-KAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLL  276 (355)
T ss_pred             EEEecCCccccChHHhhcCCCC-cchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHH
Confidence            6788999999999999999885 999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC-----ChHhHhcCccccc
Q 016991          246 DPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       246 ~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +.|-.+|.     ...+|..||||+.
T Consensus       277 ~vD~t~R~gnlknG~~dIk~H~wF~~  302 (355)
T KOG0616|consen  277 QVDLTKRFGNLKNGVEDIKNHPWFKG  302 (355)
T ss_pred             hhhhHhhhcCcCCCccccccCccccc
Confidence            99999994     5689999999974

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-61  Score=456.71  Aligned_cols=261  Identities=34%  Similarity=0.644  Sum_probs=244.4

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      .....+|.+++.||+|+|++|++|+++.+++.||||+++|..+.++..++-+.+|-.+|.+| .||.|++|+..|++...
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            34678999999999999999999999999999999999999988888889999999999999 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+|+||+++|+|+++|.+.+.+++..++.|+.||+.||+|||++|||||||||||||+|.+|++||+|||.+.......
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987654311


Q ss_pred             c-----------c--ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC
Q 016991          164 E-----------L--LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP  230 (379)
Q Consensus       164 ~-----------~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p  230 (379)
                      .           .  ..+.+||..|++||+|.+.. .++.+|||+||||||+|++|.+||.+.+....+++|....+.+|
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp  307 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP  307 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC
Confidence            0           1  13478999999999997654 46999999999999999999999999999999999999999999


Q ss_pred             CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          231 FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +.+++.+++||+++|..||++|+|+.+|.+||||..
T Consensus       308 ~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  308 EGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             CCCCHHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence            999999999999999999999999999999999975

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=9.6e-59  Score=439.61  Aligned_cols=263  Identities=36%  Similarity=0.654  Sum_probs=238.8

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      +....+++|++++.||+||||.||+|+.+.||+.+|+|+++|........++.++.|..+|....+|+||++|..|++.+
T Consensus       135 R~r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~  214 (550)
T KOG0605|consen  135 RTRLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE  214 (550)
T ss_pred             cccCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC
Confidence            34567889999999999999999999999999999999999998888888999999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-  161 (379)
                      ++||||||++||++..+|.+.+.|+|+.++.|+.+++.|++-||+.|+|||||||+|+|||..|++||+|||||.-... 
T Consensus       215 ~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~  294 (550)
T KOG0605|consen  215 YLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK  294 (550)
T ss_pred             eeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999852110 


Q ss_pred             ---------------------Cccc-------------------------ccccccCCCCCchhhhccCCCCCCchhHHH
Q 016991          162 ---------------------GVEL-------------------------LHTTCGTPNYVAPEVLSNRGYDGSAADVWS  195 (379)
Q Consensus       162 ---------------------~~~~-------------------------~~~~~gt~~y~aPE~l~~~~~~~~~~DiwS  195 (379)
                                           ....                         ....+|||.|+|||++.+.+| +..+|+||
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY-~~~cDwWS  373 (550)
T KOG0605|consen  295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY-GKECDWWS  373 (550)
T ss_pred             hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC-CccccHHH
Confidence                                 0000                         123469999999999999997 49999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC--CCCHhHHHHHHHccCCCCCCCCC---hHhHhcCcccccc
Q 016991          196 CGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF--WFSTGATSLIHKILDPNPKTRIR---IEGIRKHPWFRKN  267 (379)
Q Consensus       196 lGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~~~~li~~~L~~dP~~R~s---~~~il~hp~f~~~  267 (379)
                      ||||+||||.|++||.+.+..+.+++|....  +.+|.  .+|++++|||.+||. ||.+|..   ++||.+||||+..
T Consensus       374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence            9999999999999999999999999997765  55554  479999999999999 9999995   8999999999863

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-58  Score=421.98  Aligned_cols=258  Identities=28%  Similarity=0.459  Sum_probs=234.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe-E
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK-V   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~-~   84 (379)
                      ...++.+.++.||+|+.|+||+++++.|+..+|+|++....  +....+++.+|+++++..+|||||.+|+.|..+.. +
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~--~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI--DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI  153 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC--CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence            34557888999999999999999999999999999995433  45567899999999999999999999999999994 9


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +++||||+||+|.+.+...++++|.....++.++++||.|||. ++|+||||||+|||++..|.+||||||.+...... 
T Consensus       154 sI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-  232 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-  232 (364)
T ss_pred             EeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence            9999999999999999988999999999999999999999995 99999999999999999999999999999876654 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhc-ccCCCCC-CCHh
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET-----DLPTLYKKINAA-EFSCPFW-FSTG  236 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~-----~~~~~~~~i~~~-~~~~p~~-~s~~  236 (379)
                       ...+.+||..|||||.+.+..|. .++||||||+.++|+..|+.||...     ++.++...|... ...+|.. +|++
T Consensus       233 -~a~tfvGT~~YMsPERi~g~~Ys-~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~e  310 (364)
T KOG0581|consen  233 -IANTFVGTSAYMSPERISGESYS-VKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPE  310 (364)
T ss_pred             -hcccccccccccChhhhcCCcCC-cccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHH
Confidence             66889999999999999988775 8899999999999999999999774     566778888774 4567776 9999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      +++||..||++||.+|+|+.|+++|||+++..
T Consensus       311 f~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  311 FRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            99999999999999999999999999998653

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-58  Score=422.84  Aligned_cols=261  Identities=38%  Similarity=0.673  Sum_probs=239.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...+++|.+.+.||+|+||+||+|+++.++..||||.+.+... .....+.+..||.+|+.++|||||.++++....+.+
T Consensus         6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i   84 (429)
T KOG0595|consen    6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFI   84 (429)
T ss_pred             ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeE
Confidence            4578999999999999999999999999999999999988764 344568899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC------CCeEEeeeccccC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY------GNLKVSDFGLSAL  158 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~------~~lkl~DfGl~~~  158 (379)
                      |+|||||+||+|.+++.+.++++|..++.++.||+.||++||+++|+||||||.||||+.+      -.+||+|||+|+.
T Consensus        85 ~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   85 YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence            9999999999999999999999999999999999999999999999999999999999865      3589999999998


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCH
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFST  235 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~  235 (379)
                      ...+ ....+.||+|.|||||++....|+ .|+|+||+|+|||+|++|+.||+..+..++...+..+..   .+|.++++
T Consensus       165 L~~~-~~a~tlcGSplYMAPEV~~~~~Yd-AKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~  242 (429)
T KOG0595|consen  165 LQPG-SMAETLCGSPLYMAPEVIMSQQYD-AKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSN  242 (429)
T ss_pred             CCch-hHHHHhhCCccccCHHHHHhcccc-chhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccC
Confidence            7754 677899999999999999888886 999999999999999999999999999999888877654   34567899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ...+|+...|..+|..|.+..+-+.|++.....
T Consensus       243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  243 PLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             chhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            999999999999999999999999999987654

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-58  Score=423.61  Aligned_cols=267  Identities=38%  Similarity=0.705  Sum_probs=251.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..-.||++.++||+|+||+|.+|.....|+.||||.|+++.+.+++..-.+++||+||..|+||||+.+|++|++.+.+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            45579999999999999999999999999999999999999998888889999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||..+|+|.+++...+.++|.+++.+|+||++|+.|||+++++|||||.+|||+|.|+++||+|||++..+... ..
T Consensus       130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-kf  208 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-KF  208 (668)
T ss_pred             EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc-cH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999887654 67


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHcc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  245 (379)
                      +.+.||+|-|.+||++.+.+|.++.+|-|||||+||.|+.|..||++.+...+.++|..+.|.-|. -+.++.-||++||
T Consensus       209 LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-~PSdA~gLIRwmL  287 (668)
T KOG0611|consen  209 LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-TPSDASGLIRWML  287 (668)
T ss_pred             HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-CCchHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999999999999987776 4567789999999


Q ss_pred             CCCCCCCCChHhHhcCccccccCCCCCCc
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCS  274 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~~~~~~~  274 (379)
                      -.||.+|.|+++|-.|=|.+-.|+...+.
T Consensus       288 mVNP~RRATieDiAsHWWvNwgy~~~V~~  316 (668)
T KOG0611|consen  288 MVNPERRATIEDIASHWWVNWGYNMPVIQ  316 (668)
T ss_pred             hcCcccchhHHHHhhhheeeccccccccc
Confidence            99999999999999999988777654443

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-57  Score=437.18  Aligned_cols=260  Identities=33%  Similarity=0.613  Sum_probs=244.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~   83 (379)
                      ...+.+|.+.+.||+|+||+|++|..+.+++.||||+++|..+.....++..+.|-+|+...+ ||.+++++..|++.++
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~  443 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH  443 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence            456789999999999999999999999999999999999999988888999999999998876 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||+.||++ ..+.+.+.+++..++.|+..++.||.|||++||||||||.+|||||..|++||+|||+++......
T Consensus       444 l~fvmey~~Ggdm-~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g  522 (694)
T KOG0694|consen  444 LFFVMEYVAGGDL-MHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQG  522 (694)
T ss_pred             EEEEEEecCCCcE-EEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCC
Confidence            9999999999994 445555899999999999999999999999999999999999999999999999999998766444


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ....|.||||.|+|||++.+..| +.++|+|||||+|||||.|+.||.+.+..++...|...++.+|.|+|.++.+++++
T Consensus       523 ~~TsTfCGTpey~aPEil~e~~Y-t~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~  601 (694)
T KOG0694|consen  523 DRTSTFCGTPEFLAPEVLTEQSY-TRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRR  601 (694)
T ss_pred             CccccccCChhhcChhhhccCcc-cchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHH
Confidence            57789999999999999998887 49999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCh-----HhHhcCccccc
Q 016991          244 ILDPNPKTRIRI-----EGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~-----~~il~hp~f~~  266 (379)
                      +|..||.+|..+     ++|++||||+.
T Consensus       602 ll~k~p~kRLG~~e~d~~~i~~hpFFr~  629 (694)
T KOG0694|consen  602 LLRKNPEKRLGSGERDAEDIKKHPFFRS  629 (694)
T ss_pred             HhccCcccccCCCCCCchhhhhCCcccc
Confidence            999999999965     78999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=3.3e-57  Score=401.83  Aligned_cols=258  Identities=27%  Similarity=0.433  Sum_probs=221.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      |++|+.+.++|+|+||+||++++++||+.||||.+-... .+....+-..+||+.|+.++|||+|.++++|.....+++|
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV   79 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV   79 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence            578999999999999999999999999999999885432 2333445578999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      +|||+..-|.+.-.....+++..++.|++|++.|+.|||+++++|||||||||||+.+|.+||||||+|+......+...
T Consensus        80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT  159 (396)
T KOG0593|consen   80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT  159 (396)
T ss_pred             eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence            99997655544444456899999999999999999999999999999999999999999999999999998876667788


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------------cc----cC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA---------------AE----FS  228 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~---------------~~----~~  228 (379)
                      .++.|.+|+|||.+.+...+|.++||||+||++.||++|++.|++.+...+.-.|..               ..    ..
T Consensus       160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~  239 (396)
T KOG0593|consen  160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVR  239 (396)
T ss_pred             hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeee
Confidence            899999999999999977778999999999999999999999998776543322211               00    11


Q ss_pred             CC------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          229 CP------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       229 ~p------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +|            +.+|..+.||+++||+.||.+|++.+|++.||||..
T Consensus       240 lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  240 LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence            22            125778899999999999999999999999999943

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-56  Score=417.82  Aligned_cols=266  Identities=35%  Similarity=0.640  Sum_probs=235.4

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH-----------HHHHHHHHHHHHHhCCCCCcce
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR-----------MVDQIKREISIMKIVRHPNIVR   73 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~-----------~~~~~~~Ei~~l~~l~hp~Iv~   73 (379)
                      ...++.|++++.||+|.||+|.+|++..+++.||||++.+.......           -.+.+++||.+|+++.|||||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            45688999999999999999999999999999999999875432211           2358999999999999999999


Q ss_pred             EEEEEEe--CCeEEEEEeccCCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEE
Q 016991           74 LHEVLAS--RTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKV  150 (379)
Q Consensus        74 l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~~~~-l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl  150 (379)
                      ++++..+  .+++|+|+|||+.|.+.. .-..+. +++.+++.|+++++.||+|||.+||+||||||+|+||+++|++||
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKI  251 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKI  251 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEe
Confidence            9999975  578999999999998754 333344 999999999999999999999999999999999999999999999


Q ss_pred             eeeccccCCCC-----CcccccccccCCCCCchhhhcc---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 016991          151 SDFGLSALPQQ-----GVELLHTTCGTPNYVAPEVLSN---RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI  222 (379)
Q Consensus       151 ~DfGl~~~~~~-----~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i  222 (379)
                      +|||.+.....     .+..+...+|||.|+|||.+.+   ..+.+.+.||||+||+||-|+.|++||-+....+++.+|
T Consensus       252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI  331 (576)
T KOG0585|consen  252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI  331 (576)
T ss_pred             eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence            99999876632     3344566889999999999977   557789999999999999999999999999999999999


Q ss_pred             HhcccCCCCC--CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCC
Q 016991          223 NAAEFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       223 ~~~~~~~p~~--~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                      ....+.+|..  +.++++|||.+||.+||.+|+++.+|..|||........
T Consensus       332 vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~~~  382 (576)
T KOG0585|consen  332 VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGDSP  382 (576)
T ss_pred             hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCCCC
Confidence            9999998876  799999999999999999999999999999998765433

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=9e-58  Score=394.74  Aligned_cols=259  Identities=40%  Similarity=0.754  Sum_probs=236.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +..-+.|++.+.||+|+|+.||++.+..||+.+|+|+++...+... ..+.+.+|+++-+.|+||||+++++.+.+.+..
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~   85 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFH   85 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhccccee
Confidence            3456789999999999999999999999999999999987776555 458899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lkl~DfGl~~~~~~  161 (379)
                      |+|+|+++|++|..-|..+--++|..+-.+++||+++|.|||.+||+|||+||+|+++-..   .-+||+|||++.... 
T Consensus        86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-  164 (355)
T KOG0033|consen   86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-  164 (355)
T ss_pred             EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence            9999999999999888777788999999999999999999999999999999999999543   359999999998766 


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC--C--CCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF--W--FSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~--~s~~~  237 (379)
                      +.......+|||.|+|||++...+| +.++|||++|||||-||.|++||.+.+...+|+.|..+.+.+|.  |  +++++
T Consensus       165 ~g~~~~G~~GtP~fmaPEvvrkdpy-~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~A  243 (355)
T KOG0033|consen  165 DGEAWHGFAGTPGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEA  243 (355)
T ss_pred             CccccccccCCCcccCHHHhhcCCC-CCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHH
Confidence            4455667889999999999988777 59999999999999999999999999999999999999887664  3  89999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++|+++||..||++|+|+.|+|+|||+..
T Consensus       244 k~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  244 KSLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHHHHHHhccChhhhccHHHHhCCchhcc
Confidence            99999999999999999999999999974

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.6e-57  Score=398.00  Aligned_cols=249  Identities=32%  Similarity=0.570  Sum_probs=227.0

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEE-EEE-eCC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE-VLA-SRT   82 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~-~~~-~~~   82 (379)
                      ......|++.+.||+|+||+||++.+..+|..||.|.+.-.. .+....+.+..||.+|++|+|||||++++ .+. +..
T Consensus        15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e   93 (375)
T KOG0591|consen   15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-MDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE   93 (375)
T ss_pred             cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-ccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch
Confidence            456678999999999999999999999999999999997433 34455678999999999999999999998 344 444


Q ss_pred             eEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--CC--ceeecCCCCcEEEccCCCeEEeeec
Q 016991           83 KVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHS--KG--VYHRDLKPENLLLDSYGNLKVSDFG  154 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~--~g--i~HrDlkp~NIll~~~~~lkl~DfG  154 (379)
                      .+++|||||.+|+|.+.|..    +..++|..+|+++.|++.||+.||+  ..  |+||||||.||+++.+|.+||+|||
T Consensus        94 vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG  173 (375)
T KOG0591|consen   94 VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFG  173 (375)
T ss_pred             hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccch
Confidence            59999999999999998864    3479999999999999999999999  45  9999999999999999999999999


Q ss_pred             cccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-CC-CC
Q 016991          155 LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CP-FW  232 (379)
Q Consensus       155 l~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p-~~  232 (379)
                      ++++........++.+|||.||+||++.+.+|+ .++||||+||++|||++-++||.+.+..++.++|..++++ +| ..
T Consensus       174 L~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~-~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~  252 (375)
T KOG0591|consen  174 LGRFLSSKTTFAHSLVGTPYYMSPERIHESGYN-FKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEH  252 (375)
T ss_pred             hHhHhcchhHHHHhhcCCCcccCHHHHhcCCCC-cchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHH
Confidence            999998887888999999999999999999986 9999999999999999999999999999999999999986 67 56


Q ss_pred             CCHhHHHHHHHccCCCCCCCCCh
Q 016991          233 FSTGATSLIHKILDPNPKTRIRI  255 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~  255 (379)
                      +|.++..||..|+.+||..||+.
T Consensus       253 YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  253 YSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             hhhHHHHHHHHHccCCcccCCCc
Confidence            89999999999999999999986

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-56  Score=386.53  Aligned_cols=260  Identities=38%  Similarity=0.693  Sum_probs=247.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .++.+++|++++.||+|-||.||+|+.+.++..||+|++.+......+...++++|++|...|+||||+++|++|.+...
T Consensus        17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~r   96 (281)
T KOG0580|consen   17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKR   96 (281)
T ss_pred             cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccce
Confidence            56789999999999999999999999999999999999999888887788899999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           84 VYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~--~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +|+++||..+|+++..+.  ...++++..++.|++|++.||.|||.++|+||||||+|+|++.+|.+|++|||-+.....
T Consensus        97 iyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~  176 (281)
T KOG0580|consen   97 IYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  176 (281)
T ss_pred             eEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC
Confidence            999999999999999998  667899999999999999999999999999999999999999999999999999876553


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI  241 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li  241 (379)
                        ..-.+.|||..|.+||...+.+++ ..+|+|++|++.||++.|.+||...+..+.|++|...++.+|..+|.++.|||
T Consensus       177 --~kR~tlcgt~dyl~pEmv~~~~hd-~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI  253 (281)
T KOG0580|consen  177 --NKRKTLCGTLDYLPPEMVEGRGHD-KFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLI  253 (281)
T ss_pred             --CCceeeecccccCCHhhcCCCCcc-chhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHH
Confidence              345688999999999999998886 99999999999999999999999999999999999999999999999999999


Q ss_pred             HHccCCCCCCCCChHhHhcCccccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .+||..+|..|.+..|++.|||+..
T Consensus       254 ~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  254 SRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHHhccCccccccHHHHhhhHHHHh
Confidence            9999999999999999999999864

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-56  Score=416.58  Aligned_cols=262  Identities=32%  Similarity=0.510  Sum_probs=228.7

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASR   81 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~   81 (379)
                      +....++||.+++.||.|+||.||+|+...+|+.||||.+++.....++ + .=.||+..|++++ ||||+++.+++.+.
T Consensus         4 ~~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee-~-~nLREvksL~kln~hpniikL~Evi~d~   81 (538)
T KOG0661|consen    4 TQVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEE-C-MNLREVKSLRKLNPHPNIIKLKEVIRDN   81 (538)
T ss_pred             eehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHH-H-HHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence            4556789999999999999999999999999999999999765444332 2 2357999999999 99999999999888


Q ss_pred             C-eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 T-KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 ~-~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      + .+|+||||| ...|.+.+..+ ..+++..++.|++||++||+|+|++|+.|||+||||||+..+..+||+|||+|+..
T Consensus        82 ~~~L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   82 DRILYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             CceEeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccc
Confidence            8 999999999 56899998765 46899999999999999999999999999999999999999999999999999876


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN----------------  223 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~----------------  223 (379)
                      ... .....++.|.+|+|||+|...++++.+.|+|++|||++|+.+-++.|++.+......+|.                
T Consensus       161 ~Sk-pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~  239 (538)
T KOG0661|consen  161 RSK-PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN  239 (538)
T ss_pred             ccC-CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence            654 456788999999999999999999999999999999999999999999988765555542                


Q ss_pred             ---hcccCCCC-----------CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          224 ---AAEFSCPF-----------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       224 ---~~~~~~p~-----------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                         ...+.+|.           ..++++.++|.+||.+||.+||||+++++||||+...
T Consensus       240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence               12233332           2688999999999999999999999999999998754

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.2e-55  Score=419.21  Aligned_cols=259  Identities=31%  Similarity=0.572  Sum_probs=245.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      |++|.+.+.||+|+||.||+|+.+.|.+.||||.++|.... ....+.+.+|+++++.++|||||.+++.|++..++++|
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV   79 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV   79 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence            57899999999999999999999999999999999886533 33568899999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      .|||.| +|+.++..++.++|+.++.++.|++.||+|||+.+|.|||+||.|||++.+|++|+||||+++.+..+...+.
T Consensus        80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence            999977 9999999999999999999999999999999999999999999999999999999999999998888777778


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      ..-|||.|||||++.+..|+ ..+|+||||||+|||.+|++||-..+..++.+.|...+...|...|..+.+|+..+|.+
T Consensus       159 sikGtPlYmAPElv~e~pyd-~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~k  237 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEEQPYD-HTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIK  237 (808)
T ss_pred             eccCcccccCHHHHcCCCcc-chhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhc
Confidence            88899999999999988886 99999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCChHhHhcCccccccCC
Q 016991          248 NPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       248 dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      ||.+|+|..+++.|||.+....
T Consensus       238 dP~~RltW~~Ll~HpF~k~~~~  259 (808)
T KOG0597|consen  238 DPAQRLTWTDLLGHPFWKGKIN  259 (808)
T ss_pred             ChhhcccHHHHhcChHHhhhhh
Confidence            9999999999999999987554

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-54  Score=407.39  Aligned_cols=260  Identities=31%  Similarity=0.480  Sum_probs=227.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--T   82 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~   82 (379)
                      ....+.|+.++.||+|+||.||+|++..||+.||+|.+..+.. +........+||.||++|+||||+++.+...+.  +
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~  191 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG  191 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence            3456789999999999999999999999999999999977543 344567788999999999999999999999876  7


Q ss_pred             eEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      .+|+|+|||+ -+|.-++.. .-.+++.+++.|+.||+.||+|||++||+|||||.+|||||.+|.+||+|||||+++..
T Consensus       192 siYlVFeYMd-hDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  192 SIYLVFEYMD-HDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             eEEEEEeccc-chhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            8999999995 477777765 34899999999999999999999999999999999999999999999999999998766


Q ss_pred             Cc-ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc----------cCCC
Q 016991          162 GV-ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE----------FSCP  230 (379)
Q Consensus       162 ~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~----------~~~p  230 (379)
                      .. ..+...+-|.+|+|||.|.+...++.++|+||+||||.||+.|+++|++.+..++..+|...-          ..+|
T Consensus       271 ~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP  350 (560)
T KOG0600|consen  271 SGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP  350 (560)
T ss_pred             CCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence            43 346777889999999999999888999999999999999999999999998877766663210          1112


Q ss_pred             -------------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          231 -------------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       231 -------------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                         ..+++.+.+|+..||..||.+|.|+.++|+|+||..
T Consensus       351 ~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t  405 (560)
T KOG0600|consen  351 HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT  405 (560)
T ss_pred             cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence                               126889999999999999999999999999999944

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=8.6e-54  Score=408.09  Aligned_cols=259  Identities=39%  Similarity=0.726  Sum_probs=237.5

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ....+++|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++...+.
T Consensus        13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   92 (329)
T PTZ00263         13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR   92 (329)
T ss_pred             CCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE
Confidence            35668999999999999999999999999999999999987655444456778999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      .|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...... 
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-  171 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR-  171 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence            9999999999999999998889999999999999999999999999999999999999999999999999998755432 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                        ..+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....+..+......+|.++++.+.+||.+
T Consensus       172 --~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  248 (329)
T PTZ00263        172 --TFTLCGTPEYLAPEVIQSKGH-GKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKG  248 (329)
T ss_pred             --cceecCChhhcCHHHHcCCCC-CCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHH
Confidence              235689999999999987766 58999999999999999999999988888888889888889999999999999999


Q ss_pred             ccCCCCCCCCC-----hHhHhcCccccc
Q 016991          244 ILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ||+.||.+|++     +++++.||||+.
T Consensus       249 ~L~~dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        249 LLQTDHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence            99999999997     799999999975

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-54  Score=408.76  Aligned_cols=263  Identities=39%  Similarity=0.691  Sum_probs=244.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +..-|=|.+.++||+|-|+.|.+|++.-||+.||||++++.+.... ....+.+|++.|+.++|||||++|++...+.++
T Consensus        14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKl   92 (864)
T KOG4717|consen   14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKL   92 (864)
T ss_pred             cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceE
Confidence            3455679999999999999999999999999999999998765443 446789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE-ccCCCeEEeeeccccCCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL-DSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll-~~~~~lkl~DfGl~~~~~~~  162 (379)
                      |+|+|.-++|+|+++|.+. ..+.|+.+++||.||+.|+.|||+..++||||||||+.+ ..-|-+||+|||++..+..+
T Consensus        93 yLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   93 YLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             EEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            9999999999999999765 589999999999999999999999999999999999876 56789999999999877665


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                       ..+.+.||+..|.|||++.+..|+.+++||||||||||.|++|++||...+..+....|....|..|..+|.++++||.
T Consensus       173 -~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~  251 (864)
T KOG4717|consen  173 -KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQ  251 (864)
T ss_pred             -chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHH
Confidence             5678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HccCCCCCCCCChHhHhcCccccccCC
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      .||+.||.+|.+.++|..|+|++..-.
T Consensus       252 sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  252 SMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             HHHhcCchhhccHHHHhccccccCCCC
Confidence            999999999999999999999987543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-54  Score=401.22  Aligned_cols=259  Identities=32%  Similarity=0.564  Sum_probs=222.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT--KVY   85 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~--~~~   85 (379)
                      ..+|..++.||+|+||.||++.+.++|..+|||.+....   ....+.+.+|+.+|++++|||||++++......  .++
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~   92 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN   92 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence            346899999999999999999999999999999987652   112678999999999999999999999754444  699


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccccCCCC--
Q 016991           86 IILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQ--  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~--  161 (379)
                      ++|||++||+|.+++.+.+ +++|..++++.+||++||.|||++||+||||||+|||++. +|.+||+|||++.....  
T Consensus        93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~  172 (313)
T KOG0198|consen   93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG  172 (313)
T ss_pred             eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence            9999999999999999877 7999999999999999999999999999999999999999 79999999999876653  


Q ss_pred             -CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcc--cCCCCCCCHhH
Q 016991          162 -GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAE--FSCPFWFSTGA  237 (379)
Q Consensus       162 -~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~-~~~~~~~~~i~~~~--~~~p~~~s~~~  237 (379)
                       .........||+.|||||++.+......++||||+||++.||++|..||.. .......-.+....  +.+|.++|+++
T Consensus       173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a  252 (313)
T KOG0198|consen  173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEA  252 (313)
T ss_pred             ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHH
Confidence             112234578999999999998633334599999999999999999999987 34444333443333  57889999999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      ++||.+||..||++|||++++|.|||.+....
T Consensus       253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  253 KDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             HHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            99999999999999999999999999976543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-53  Score=396.83  Aligned_cols=254  Identities=33%  Similarity=0.622  Sum_probs=232.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            47999999999999999999999999999999997654444445567899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......   ...
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~---~~~  157 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR---TWT  157 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC---ccc
Confidence            99999999999998889999999999999999999999999999999999999999999999999998755332   234


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....++.+......+|..+++.+++||++||+.|
T Consensus       158 ~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~d  236 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGH-NKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVD  236 (291)
T ss_pred             ccCChhhcCHHHHcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCC
Confidence            579999999999987766 5899999999999999999999999888888899988888899999999999999999999


Q ss_pred             CCCCCC-----hHhHhcCccccc
Q 016991          249 PKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       249 P~~R~s-----~~~il~hp~f~~  266 (379)
                      |.+|++     ++++++||||+.
T Consensus       237 p~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         237 RTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHHccCCccCCHHHHhcCccccC
Confidence            999995     999999999974

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=4.1e-53  Score=402.39  Aligned_cols=251  Identities=35%  Similarity=0.604  Sum_probs=229.0

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999998765444445567889999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCC
Q 016991           95 ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN  174 (379)
Q Consensus        95 ~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~  174 (379)
                      +|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~  160 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence            99999998889999999999999999999999999999999999999999999999999998754333334456789999


Q ss_pred             CCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC-
Q 016991          175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI-  253 (379)
Q Consensus       175 y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~-  253 (379)
                      |+|||++.+..+ +.++||||+||++|+|++|..||.+.+.......+......+|..+++++.+||.+||+.||++|| 
T Consensus       161 y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05571         161 YLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             ccChhhhcCCCC-CccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCC
Confidence            999999987666 589999999999999999999999988888888888888889999999999999999999999999 


Q ss_pred             ----ChHhHhcCccccc
Q 016991          254 ----RIEGIRKHPWFRK  266 (379)
Q Consensus       254 ----s~~~il~hp~f~~  266 (379)
                          ++.++++||||..
T Consensus       240 ~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         240 GGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             CCCCCHHHHHcCCCcCC
Confidence                8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2.4e-53  Score=371.23  Aligned_cols=258  Identities=33%  Similarity=0.484  Sum_probs=225.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|...+.||+|+||.||+|++..||+.||||.+......+ .......+||+.|+.++|+||+.++++|...+.+.+|+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence            58999999999999999999999999999999998764432 23456789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||++ .+|...|+... .++..+++.|+.++++||+|||++.|+||||||.|+|++.+|.+||+|||+++..........
T Consensus        81 Efm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~  159 (318)
T KOG0659|consen   81 EFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT  159 (318)
T ss_pred             Eecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence            9995 58888887653 688999999999999999999999999999999999999999999999999999887666666


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-c--------------------
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-E--------------------  226 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~--------------------  226 (379)
                      ..+-|.+|+|||.+.+...++..+|+||.|||+.||+-|.+-|++.+..++...|-.. .                    
T Consensus       160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~  239 (318)
T KOG0659|consen  160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ  239 (318)
T ss_pred             cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence            6689999999999999888899999999999999999999999998876665555221 0                    


Q ss_pred             -cCCC------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          227 -FSCP------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       227 -~~~p------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                       ++.|      +..|.++.||+.+||..||.+|+|+.|+++||||....
T Consensus       240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P  288 (318)
T KOG0659|consen  240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLP  288 (318)
T ss_pred             cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCC
Confidence             0111      12578899999999999999999999999999998643

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-53  Score=403.93  Aligned_cols=258  Identities=41%  Similarity=0.739  Sum_probs=236.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~   85 (379)
                      .-..|++++.||+|.||.||.++.+.||+.+|+|++.+.........+.+.+|+.+|+.+. |||||.+++++++...+|
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~  112 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY  112 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence            3457999999999999999999999999999999999887665555678999999999999 999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC----CCeEEeeeccccCCCC
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY----GNLKVSDFGLSALPQQ  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~----~~lkl~DfGl~~~~~~  161 (379)
                      +|||+|.||+|++.+... .++|..+..++.|++.+++|||+.||+||||||||+|+...    +.+|++|||++.....
T Consensus       113 lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            999999999999999887 49999999999999999999999999999999999999643    4799999999988776


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC--CC--CCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP--FW--FSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p--~~--~s~~~  237 (379)
                       ....++.|||+.|+|||++...+| +..+||||+||++|.|++|.+||.+.+.......|..+.+.++  .|  +|..+
T Consensus       192 -~~~~~~~~Gtp~y~APEvl~~~~y-~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~a  269 (382)
T KOG0032|consen  192 -GERLHTIVGTPEYVAPEVLGGRPY-GDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESA  269 (382)
T ss_pred             -CceEeeecCCccccCchhhcCCCC-CcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHH
Confidence             567889999999999999987777 4999999999999999999999999998888889988877543  34  69999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ++||++||..||.+|+|+.++|+|||++..
T Consensus       270 kd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  270 KDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            999999999999999999999999999764

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.5e-53  Score=389.69  Aligned_cols=262  Identities=28%  Similarity=0.479  Sum_probs=236.0

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ..-+..|++++.||.|.-|+||+++.+.++..+|+|++++..........++..|-+||+.++||.++.+|..|++....
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            44567899999999999999999999999999999999998888777788899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-
Q 016991           85 YIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-  161 (379)
                      |++||||+||+|....+++  +.+++..++.|+.+++.||+|||-.||++||||||||||-++|++.|+||.|+..... 
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~  232 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS  232 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence            9999999999999888765  4799999999999999999999999999999999999999999999999998632100 


Q ss_pred             --------------------------------C-c----------------------ccccccccCCCCCchhhhccCCC
Q 016991          162 --------------------------------G-V----------------------ELLHTTCGTPNYVAPEVLSNRGY  186 (379)
Q Consensus       162 --------------------------------~-~----------------------~~~~~~~gt~~y~aPE~l~~~~~  186 (379)
                                                      . .                      ......+||-.|+|||++.+.+.
T Consensus       233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH  312 (459)
T KOG0610|consen  233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH  312 (459)
T ss_pred             CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence                                            0 0                      00123469999999999999887


Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCC--CCHhHHHHHHHccCCCCCCCCC----hHhHhc
Q 016991          187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW--FSTGATSLIHKILDPNPKTRIR----IEGIRK  260 (379)
Q Consensus       187 ~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~--~s~~~~~li~~~L~~dP~~R~s----~~~il~  260 (379)
                       +.++|+|+|||++||||.|..||.+.+..+....|......+|..  +|..++|||+++|.+||.+|+.    +.||.+
T Consensus       313 -gsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~  391 (459)
T KOG0610|consen  313 -GSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR  391 (459)
T ss_pred             -CchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence             599999999999999999999999999999999998888888764  6899999999999999999998    999999


Q ss_pred             Ccccccc
Q 016991          261 HPWFRKN  267 (379)
Q Consensus       261 hp~f~~~  267 (379)
                      ||||+..
T Consensus       392 HpFF~gV  398 (459)
T KOG0610|consen  392 HPFFEGV  398 (459)
T ss_pred             CccccCC
Confidence            9999864

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.6e-52  Score=401.12  Aligned_cols=259  Identities=32%  Similarity=0.594  Sum_probs=234.9

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCC-cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETG-ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      .....++|++.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+
T Consensus        25 ~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~  104 (340)
T PTZ00426         25 NKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES  104 (340)
T ss_pred             CCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC
Confidence            3456789999999999999999999876655 689999997765544555677889999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ..|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            99999999999999999998889999999999999999999999999999999999999999999999999998765432


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                         ..+.+||+.|+|||++.+..+ +.++||||+||++|+|++|.+||.+.+....++.+......+|..+++.+.++|+
T Consensus       185 ---~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~  260 (340)
T PTZ00426        185 ---TYTLCGTPEYIAPEILLNVGH-GKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMK  260 (340)
T ss_pred             ---cceecCChhhcCHHHHhCCCC-CccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence               245689999999999987665 5899999999999999999999999888888889988888899999999999999


Q ss_pred             HccCCCCCCCC-----ChHhHhcCccccc
Q 016991          243 KILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +||+.||.+|+     +++++++||||+.
T Consensus       261 ~~l~~dp~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        261 KLLSHDLTKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             HHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999999996     8999999999975

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.6e-53  Score=410.17  Aligned_cols=264  Identities=39%  Similarity=0.753  Sum_probs=249.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...++.|.+.++||+|.|++|.+|++..||..||||++++....... ...+.+|+++|+.++|||||+++.+......+
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~l  130 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATL  130 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeeccee
Confidence            46788999999999999999999999999999999999987654443 34589999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||+.+|++++++.+++++.+..++.+|.|+++|++|||+++|+|||||++||||+.+-++||+|||++.++..+ .
T Consensus       131 ylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~-~  209 (596)
T KOG0586|consen  131 YLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG-L  209 (596)
T ss_pred             EEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc-c
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999988743 6


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      .+.+.||++.|.|||++.+..|+++.+|+||+|++||.|+.|.+||++.+...+......+.+.+|..+|.++.++|+++
T Consensus       210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~  289 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKF  289 (596)
T ss_pred             cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHh
Confidence            78899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCChHhHhcCccccccCCC
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      |.++|.+|+++++|+.|+|....+..
T Consensus       290 lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  290 LVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             hccCccccCCHHHhhhhcccchhhhh
Confidence            99999999999999999998765543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-53  Score=385.24  Aligned_cols=262  Identities=29%  Similarity=0.445  Sum_probs=225.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----CCe
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-----RTK   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-----~~~   83 (379)
                      .+|...+.||+|+||.|..|.++.+|+.||||.+.. .+...-.+++..+|+++|+.++|+||+.+.+++..     -..
T Consensus        22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~-~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D  100 (359)
T KOG0660|consen   22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILN-PFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND  100 (359)
T ss_pred             ceecccccccCcceeeEEEEEEcCCCCEeehhhhhh-hhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence            456667999999999999999999999999998864 34556677889999999999999999999999865     457


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC--
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~--  161 (379)
                      +|+|+|+| +.+|...+..+..++++.++.+++||+.||+|+||.+|+||||||.|+|++.+..+||+|||+|+....  
T Consensus       101 vYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~  179 (359)
T KOG0660|consen  101 VYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF  179 (359)
T ss_pred             eEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccC
Confidence            99999999 778888888877799999999999999999999999999999999999999999999999999987653  


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----------------
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA----------------  225 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~----------------  225 (379)
                      ....+..++.|.+|+|||++.+...++.+.||||+|||+.||++|++.|.+.+.....+.|...                
T Consensus       180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~  259 (359)
T KOG0660|consen  180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEK  259 (359)
T ss_pred             cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHH
Confidence            3355678889999999999988777789999999999999999999999988765544433211                


Q ss_pred             -------ccCCC--------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCCC
Q 016991          226 -------EFSCP--------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK  272 (379)
Q Consensus       226 -------~~~~p--------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~~  272 (379)
                             ....|        +..++.+.+|+.+||..||.+|+|++|+|+|||+.....+..
T Consensus       260 ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~d  321 (359)
T KOG0660|consen  260 ARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPED  321 (359)
T ss_pred             HHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence                   01111        247899999999999999999999999999999988766544

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=5.2e-54  Score=376.58  Aligned_cols=259  Identities=35%  Similarity=0.640  Sum_probs=232.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc-----cchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-----LKHRMVDQIKREISIMKIVR-HPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~-----~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~   80 (379)
                      ...+|+-.+.||+|..++|.++.++.+|..+|+|++.....     ...+..+.-.+|+.+|+++. ||||+++.+++++
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes   94 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES   94 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence            45678889999999999999999999999999999974221     12335566788999999885 9999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +..+++|+|.|+.|+|++++.....++|+..+++++||+.|+.|||.++|+||||||+|||+|++.++||+|||+++...
T Consensus        95 ~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen   95 DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLE  174 (411)
T ss_pred             cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998877


Q ss_pred             CCcccccccccCCCCCchhhhccC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC--CCC-
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNR-----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC--PFW-  232 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~--p~~-  232 (379)
                      .+ ..+...||||+|.|||.+...     +-++..+|+|+||||+|.||.|.+||-.....-+.+.|..+.+.+  |.| 
T Consensus       175 ~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWa  253 (411)
T KOG0599|consen  175 PG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA  253 (411)
T ss_pred             Cc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchh
Confidence            65 567889999999999998532     223588999999999999999999998888888889998888764  666 


Q ss_pred             -CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 -FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 -~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                       +|.+++|||++||+.||.+|+|++|+|.||||..
T Consensus       254 dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  254 DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             hccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence             7999999999999999999999999999999954

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.1e-52  Score=394.44  Aligned_cols=250  Identities=35%  Similarity=0.631  Sum_probs=227.7

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            79999999999999999999999999875544444567788999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCC
Q 016991           97 FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV  176 (379)
Q Consensus        97 ~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~  176 (379)
                      .+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+.|+
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~  160 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYL  160 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcccC
Confidence            99999888999999999999999999999999999999999999999999999999999876444333445678999999


Q ss_pred             chhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC---
Q 016991          177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI---  253 (379)
Q Consensus       177 aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~---  253 (379)
                      |||++.+..+ +.++||||+||++|+|++|..||.+.+....++.+......+|..+++++.+||.+||..||.+||   
T Consensus       161 aPE~~~~~~~-~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~  239 (312)
T cd05585         161 APELLLGHGY-TKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYN  239 (312)
T ss_pred             CHHHHcCCCC-CCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            9999987766 489999999999999999999999988888888888888889999999999999999999999997   


Q ss_pred             ChHhHhcCcccccc
Q 016991          254 RIEGIRKHPWFRKN  267 (379)
Q Consensus       254 s~~~il~hp~f~~~  267 (379)
                      ++.+++.||||...
T Consensus       240 ~~~e~l~hp~~~~~  253 (312)
T cd05585         240 GAQEIKNHPFFSQL  253 (312)
T ss_pred             CHHHHHcCCCcCCC
Confidence            57999999999753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=6.4e-52  Score=395.05  Aligned_cols=251  Identities=34%  Similarity=0.611  Sum_probs=228.1

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||+|+||.||++.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999998765544555677889999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCC
Q 016991           95 ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN  174 (379)
Q Consensus        95 ~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~  174 (379)
                      +|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............+||+.
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~  160 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPE  160 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCCcC
Confidence            99999988889999999999999999999999999999999999999999999999999998754333333456789999


Q ss_pred             CCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC-
Q 016991          175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI-  253 (379)
Q Consensus       175 y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~-  253 (379)
                      |+|||++.+..+ +.++|||||||++|+|++|..||...+.......+......+|..+++++.+||++||+.||.+|+ 
T Consensus       161 y~aPE~~~~~~~-~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (328)
T cd05593         161 YLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLG  239 (328)
T ss_pred             ccChhhhcCCCC-CccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCC
Confidence            999999977666 589999999999999999999999888888888888888889999999999999999999999997 


Q ss_pred             ----ChHhHhcCccccc
Q 016991          254 ----RIEGIRKHPWFRK  266 (379)
Q Consensus       254 ----s~~~il~hp~f~~  266 (379)
                          ++.++++||||..
T Consensus       240 ~~~~~~~~il~h~~~~~  256 (328)
T cd05593         240 GGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             CCCCCHHHHhcCCCcCC
Confidence                8999999999965

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.8e-51  Score=397.28  Aligned_cols=256  Identities=33%  Similarity=0.600  Sum_probs=223.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||+||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++.+.+...+|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            47999999999999999999999999999999998765444555677899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-----
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-----  163 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-----  163 (379)
                      ||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.......     
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            999999999999988999999999999999999999999999999999999999999999999999986432210     


Q ss_pred             ------------------------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          164 ------------------------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       164 ------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                                                    ......+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~-~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCC-CchhhhhhHHHHHHHHhCCCCCCCC
Confidence                                          011345899999999999887765 8999999999999999999999988


Q ss_pred             ChHHHHHHHHhc--ccCCCC--CCCHhHHHHHHHccCCCCC---CCCChHhHhcCccccc
Q 016991          214 DLPTLYKKINAA--EFSCPF--WFSTGATSLIHKILDPNPK---TRIRIEGIRKHPWFRK  266 (379)
Q Consensus       214 ~~~~~~~~i~~~--~~~~p~--~~s~~~~~li~~~L~~dP~---~R~s~~~il~hp~f~~  266 (379)
                      +....+..+...  ...+|.  .+|+++.+||.+|+. +|.   .||++++|++||||+.
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~  298 (363)
T cd05628         240 TPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG  298 (363)
T ss_pred             CHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence            887777777653  344554  378999999999875 444   4689999999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-53  Score=381.52  Aligned_cols=263  Identities=32%  Similarity=0.594  Sum_probs=248.1

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      +....+++|+.++.||+|+||+|-+++.+.+|+.||||+++++-+.....+..-..|-++|+..+||.+..+...|+.++
T Consensus       162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d  241 (516)
T KOG0690|consen  162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD  241 (516)
T ss_pred             cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence            34568999999999999999999999999999999999999988777777778888999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .+++||||+.||+|+-++.+...++|+.++.|...|++||.|||+++|++||||.+|+|+|.+|++||+|||+|...-..
T Consensus       242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~  321 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY  321 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence            99999999999999999999899999999999999999999999999999999999999999999999999999866555


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                      .....+.||||.|.|||++....| +.++|+|.+||++|||++|++||...+...++..|...+..+|..+|++++.|+.
T Consensus       322 g~t~kTFCGTPEYLAPEVleDnDY-graVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLs  400 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDNDY-GRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLS  400 (516)
T ss_pred             cceeccccCChhhcCchhhccccc-cceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHH
Confidence            567789999999999999988777 5999999999999999999999999999999999999999999999999999999


Q ss_pred             HccCCCCCCCC-----ChHhHhcCccccc
Q 016991          243 KILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      .+|..||++|.     .+.+|.+|+||..
T Consensus       401 GLL~kdP~kRLGgGpdDakEi~~h~FF~~  429 (516)
T KOG0690|consen  401 GLLKKDPKKRLGGGPDDAKEIMRHRFFAS  429 (516)
T ss_pred             HHhhcChHhhcCCCchhHHHHHhhhhhcc
Confidence            99999999998     4789999999975

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-52  Score=401.01  Aligned_cols=255  Identities=26%  Similarity=0.492  Sum_probs=228.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      -...|.....||+|+.|.||.|....+++.||||.++.......   +-+.+|+.+|+..+|+|||++++.+.-.+.+|+
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k---eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV  347 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK---ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV  347 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch---hhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence            34678999999999999999999999999999999988664443   568999999999999999999999988899999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||||++||+|.+.+.. ..++|.++..++++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|.........-
T Consensus       348 VMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  348 VMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             EEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence            9999999999988765 569999999999999999999999999999999999999999999999999998877665566


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhc--ccCCCCCCCHhHHHHHHH
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAA--EFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~--~~~~p~~~s~~~~~li~~  243 (379)
                      .+.+|||+|||||++....| +.++||||||++++||+-|++||-..+.. .+|..-..+  .+..|..+|+++++||.+
T Consensus       427 ~TmVGTPYWMAPEVvtrk~Y-G~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~  505 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRKPY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDR  505 (550)
T ss_pred             ccccCCCCccchhhhhhccc-CccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHH
Confidence            78899999999999988877 59999999999999999999999866554 344333333  456788899999999999


Q ss_pred             ccCCCCCCCCChHhHhcCccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||+.||.+|+++.+||+||||+.
T Consensus       506 cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  506 CLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             HhhcchhcCCCHHHHhcChhhhh
Confidence            99999999999999999999953

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.4e-51  Score=391.46  Aligned_cols=251  Identities=34%  Similarity=0.631  Sum_probs=226.8

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..+++.||||++.+.........+.+..|+.++..+ +||||+++++++...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            4699999999999999999999999999876544444556777888888876 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP  160 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875433333445668999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+.......+.......|.++++++.+||++||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  239 (320)
T cd05590         161 DYIAPEILQEMLY-GPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRL  239 (320)
T ss_pred             cccCHHHHcCCCC-CCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            9999999987665 489999999999999999999999999888889998888889999999999999999999999999


Q ss_pred             Ch------HhHhcCccccc
Q 016991          254 RI------EGIRKHPWFRK  266 (379)
Q Consensus       254 s~------~~il~hp~f~~  266 (379)
                      ++      +++++||||+.
T Consensus       240 ~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         240 GSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             CCCCCCCHHHHHcCCCcCC
Confidence            98      99999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.4e-51  Score=391.96  Aligned_cols=251  Identities=34%  Similarity=0.605  Sum_probs=227.3

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||+|+||.||++.+..+|..||+|++.+...........+.+|+.+++.++||||+++++.+...+.+|+||||++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            47999999999999999999999999998765444445567788999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCC
Q 016991           95 ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN  174 (379)
Q Consensus        95 ~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~  174 (379)
                      +|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+.
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~  160 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE  160 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence            99999988889999999999999999999999999999999999999999999999999998754333233445679999


Q ss_pred             CCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC-
Q 016991          175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI-  253 (379)
Q Consensus       175 y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~-  253 (379)
                      |+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+......+|..+++++.+||.+||..||.+|+ 
T Consensus       161 y~aPE~~~~~~~-~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~  239 (323)
T cd05595         161 YLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG  239 (323)
T ss_pred             cCCcccccCCCC-CchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCC
Confidence            999999977666 589999999999999999999999888888888888888888999999999999999999999998 


Q ss_pred             ----ChHhHhcCccccc
Q 016991          254 ----RIEGIRKHPWFRK  266 (379)
Q Consensus       254 ----s~~~il~hp~f~~  266 (379)
                          ++.++++||||..
T Consensus       240 ~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         240 GGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             CCCCCHHHHHcCCCcCC
Confidence                8999999999975

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.5e-51  Score=390.22  Aligned_cols=256  Identities=32%  Similarity=0.600  Sum_probs=230.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP-NIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp-~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +|++.+.||+|+||.||+|.+..+++.||||++.+.........+.+..|+.++..++|+ +|+++++++...+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            589999999999999999999999999999999876544444556788899999999765 6888999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++............
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT  160 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceee
Confidence            99999999999988889999999999999999999999999999999999999999999999999998654333334456


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+.......+......+|..+++++.++|++||+.|
T Consensus       161 ~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~  239 (324)
T cd05587         161 FCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKH  239 (324)
T ss_pred             ecCCccccChhhhcCCCC-CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcC
Confidence            789999999999987666 4899999999999999999999999888888888988888889999999999999999999


Q ss_pred             CCCCCCh-----HhHhcCccccc
Q 016991          249 PKTRIRI-----EGIRKHPWFRK  266 (379)
Q Consensus       249 P~~R~s~-----~~il~hp~f~~  266 (379)
                      |.+|+++     +++++||||+.
T Consensus       240 P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         240 PAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HHHcCCCCCCCHHHHhcCCCcCC
Confidence            9999987     89999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.3e-52  Score=374.41  Aligned_cols=265  Identities=32%  Similarity=0.431  Sum_probs=228.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eC
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA--SR   81 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~~   81 (379)
                      +..+++.|+.+.+|++|+||.||+|+++.|++.||+|.++.+. ......=.-.+||.+|...+|||||.+-++..  +-
T Consensus        71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~  149 (419)
T KOG0663|consen   71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM  149 (419)
T ss_pred             CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence            3567889999999999999999999999999999999997654 22223334578999999999999999999986  44


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +.+|+|||||+. +|...+..-+ ++...+++.++.|++.|++|||.++|+||||||+|+|++..|.+||+|||+|+.+.
T Consensus       150 d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg  228 (419)
T KOG0663|consen  150 DKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYG  228 (419)
T ss_pred             ceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhc
Confidence            679999999954 8888887765 89999999999999999999999999999999999999999999999999999887


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------------  225 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------------  225 (379)
                      .........+-|.+|+|||.+.+...++.+.|+||+|||+.||+.+++.|++.+......+|-..               
T Consensus       229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l  308 (419)
T KOG0663|consen  229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL  308 (419)
T ss_pred             CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence            76666677788999999999999887889999999999999999999999998877666655211               


Q ss_pred             ----ccCCC------------CC-CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          226 ----EFSCP------------FW-FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       226 ----~~~~p------------~~-~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                          .+.+|            .. +|....+|+..+|..||.+|+|++|.|+|+||.....+
T Consensus       309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p  370 (419)
T KOG0663|consen  309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLP  370 (419)
T ss_pred             chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCC
Confidence                01111            11 46889999999999999999999999999999875544

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=2.4e-51  Score=389.91  Aligned_cols=251  Identities=33%  Similarity=0.635  Sum_probs=227.2

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||.||+|.+..+|+.||||++.+.........+.+..|..++..+ +||||+++++++...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4699999999999999999999999999876544444556677889988865 799999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      ++|...+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP  160 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875443333445668999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++||||+||++|+|++|+.||...+.....+.+.......|.++++++.++|.+||+.||++|+
T Consensus       161 ~y~aPE~~~~~~~-~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         161 DYIAPEILQELEY-GPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             cccCHHHHcCCCC-CCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcC
Confidence            9999999987666 489999999999999999999999999888899999888889999999999999999999999999


Q ss_pred             -------ChHhHhcCccccc
Q 016991          254 -------RIEGIRKHPWFRK  266 (379)
Q Consensus       254 -------s~~~il~hp~f~~  266 (379)
                             +++++++||||..
T Consensus       240 ~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         240 GCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             CCCCCCCCHHHHhcCCccCC
Confidence                   8999999999964

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=6e-51  Score=381.15  Aligned_cols=255  Identities=26%  Similarity=0.442  Sum_probs=215.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++.+.||.|+||.||+|.+..++..||+|++......  .....+.+|+.+++.++||||+++++++...+..|+
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence            467899999999999999999999999999999998754322  123567789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||++| +|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~  159 (288)
T cd07871          81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKT  159 (288)
T ss_pred             EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCcc
Confidence            9999975 8988887654 5789999999999999999999999999999999999999999999999998765443334


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------c
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------E  226 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------~  226 (379)
                      .....|++.|+|||++.+....+.++||||+||++|+|++|++||.+.+.......+...                   .
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07871         160 YSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRS  239 (288)
T ss_pred             ccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhc
Confidence            455678999999999876555568999999999999999999999877655443332110                   0


Q ss_pred             cCCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          227 FSCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       227 ~~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +.+|           ..+++++.+||++||+.||.+|||++|+++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         240 YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence            0111           2368899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=4.7e-51  Score=387.08  Aligned_cols=251  Identities=30%  Similarity=0.601  Sum_probs=223.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh-CCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI-VRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~-l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||.||+|.+..+|..||+|++.+.........+.+..|..++.. ++||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            479999999999999999999999999987543333344567778888875 4899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|..++...+.+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.............+||+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875433333445678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++||||+||++|+|++|..||.+.+.....+.+.......|.+++.++.+||.+||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~  239 (316)
T cd05620         161 DYIAPEILQGLKY-TFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRL  239 (316)
T ss_pred             CccCHHHHcCCCC-CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            9999999987766 489999999999999999999999888888888888888888999999999999999999999999


Q ss_pred             Ch-HhHhcCccccc
Q 016991          254 RI-EGIRKHPWFRK  266 (379)
Q Consensus       254 s~-~~il~hp~f~~  266 (379)
                      ++ +++++||||+.
T Consensus       240 ~~~~~~~~h~~f~~  253 (316)
T cd05620         240 GVVGNIRGHPFFKT  253 (316)
T ss_pred             CChHHHHcCCCcCC
Confidence            98 58999999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2e-51  Score=391.05  Aligned_cols=252  Identities=35%  Similarity=0.602  Sum_probs=227.7

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||+|+||.||++.+..+|..||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            46999999999999999999999999998765444445567788999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           95 ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        95 ~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      +|..++...+.+++..++.++.||+.||.|||+ .||+||||||+|||++.+|.+||+|||++.............+||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP  160 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence            999999888899999999999999999999997 7999999999999999999999999999875433333345567999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+......+|..+++++.+||.+||+.||++|+
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~  239 (325)
T cd05594         161 EYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRL  239 (325)
T ss_pred             ccCCHHHHccCCC-CCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhC
Confidence            9999999987666 589999999999999999999999988888888888888888999999999999999999999997


Q ss_pred             -----ChHhHhcCcccccc
Q 016991          254 -----RIEGIRKHPWFRKN  267 (379)
Q Consensus       254 -----s~~~il~hp~f~~~  267 (379)
                           ++.++++||||...
T Consensus       240 ~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         240 GGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence                 89999999999753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=5.8e-51  Score=387.73  Aligned_cols=254  Identities=32%  Similarity=0.560  Sum_probs=226.4

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHH---HhCCCCCcceEEEEEEeCCeEEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM---KIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l---~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      |++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.++   +.++||||+++++++...+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            78899999999999999999999999999999876544444556777787765   466799999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |||++|++|...+.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...........
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTS  159 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCccc
Confidence            999999999887754 6799999999999999999999999999999999999999999999999999865433333345


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      ..+|++.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.......+.......|..+++++.++|.+||+.
T Consensus       160 ~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~  238 (324)
T cd05589         160 TFCGTPEFLAPEVLTETSY-TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRR  238 (324)
T ss_pred             ccccCccccCHhHhcCCCC-CcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhc
Confidence            6789999999999987665 589999999999999999999999988888888888888888999999999999999999


Q ss_pred             CCCCCC-----ChHhHhcCccccc
Q 016991          248 NPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       248 dP~~R~-----s~~~il~hp~f~~  266 (379)
                      ||.+||     ++.++++||||+.
T Consensus       239 dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         239 NPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             CHhHcCCCCCCCHHHHhhCCCcCC
Confidence            999999     6899999999975

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.4e-51  Score=394.57  Aligned_cols=256  Identities=34%  Similarity=0.637  Sum_probs=224.1

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||+||+|++..+|+.||||++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            47999999999999999999999999999999998765444455677889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc----
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE----  164 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~----  164 (379)
                      ||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++........    
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            9999999999999888999999999999999999999999999999999999999999999999999864321100    


Q ss_pred             ----------------------------------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCC
Q 016991          165 ----------------------------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF  210 (379)
Q Consensus       165 ----------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf  210 (379)
                                                        .....+||+.|+|||++.+.++ +.++|||||||++|+|++|.+||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~el~~G~~Pf  239 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGY-NKECDWWSLGVIMYEMLVGYPPF  239 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCC-CCeeeeecchhHHHHhhcCCCCC
Confidence                                              1123579999999999987766 48999999999999999999999


Q ss_pred             CCCChHHHHHHHHhcc--cCCCC--CCCHhHHHHHHHccCCCCCCCCC---hHhHhcCccccc
Q 016991          211 GETDLPTLYKKINAAE--FSCPF--WFSTGATSLIHKILDPNPKTRIR---IEGIRKHPWFRK  266 (379)
Q Consensus       211 ~~~~~~~~~~~i~~~~--~~~p~--~~s~~~~~li~~~L~~dP~~R~s---~~~il~hp~f~~  266 (379)
                      .+.+.......+....  +..|.  .+|+++.+||.+||. +|.+|++   ++++++||||+.
T Consensus       240 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~  301 (364)
T cd05599         240 CSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG  301 (364)
T ss_pred             CCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            9888777666665432  33343  369999999999997 9999998   999999999975

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-51  Score=378.42  Aligned_cols=259  Identities=31%  Similarity=0.497  Sum_probs=224.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...+.|++...||.|..++||+|+...+++.||||+++.+.+...  .+.+.+|+..|+.++||||++++..|..+..+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW  100 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW  100 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence            446789999999999999999999999999999999999887654  689999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-C
Q 016991           86 IILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-G  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-~  162 (379)
                      +||.||.+|++++.+...  ..++|..+..++++++.||.|||++|-||||||+.||||+.+|.+||+|||.+..... +
T Consensus       101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            999999999999999764  4699999999999999999999999999999999999999999999999998765433 2


Q ss_pred             ccc---ccccccCCCCCchhhhc-c-CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC-------
Q 016991          163 VEL---LHTTCGTPNYVAPEVLS-N-RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP-------  230 (379)
Q Consensus       163 ~~~---~~~~~gt~~y~aPE~l~-~-~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p-------  230 (379)
                      .+.   ..+.+|||+|+|||++. . .+|+ .|+||||+|++..||.+|..||.......+.-.-..+.++.+       
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYd-fKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~  259 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYD-FKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDK  259 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCcc-chhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCCh
Confidence            111   15678999999999953 2 3554 999999999999999999999988777654433333333222       


Q ss_pred             ---CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          231 ---FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       231 ---~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                         ..++..++.+|..||+.||.+|||++++++|+||+..
T Consensus       260 d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  260 DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence               1267889999999999999999999999999999864

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=8.2e-51  Score=395.23  Aligned_cols=257  Identities=31%  Similarity=0.522  Sum_probs=221.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +.|++++.||+|+||+||+|.+..++..||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            36999999999999999999999999999999998766555556678999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC------
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG------  162 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~------  162 (379)
                      ||++||+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.+|++||+|||++......      
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~  160 (381)
T cd05626          81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY  160 (381)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence            99999999999998889999999999999999999999999999999999999999999999999987532100      


Q ss_pred             -----------------------------------------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHH
Q 016991          163 -----------------------------------------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF  201 (379)
Q Consensus       163 -----------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~  201 (379)
                                                               .....+.+||+.|+|||++.+..+. .++||||+||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlG~il~  239 (381)
T cd05626         161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYT-QLCDWWSVGVILF  239 (381)
T ss_pred             cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCC-CccceeehhhHHH
Confidence                                                     0011245799999999999877764 8999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHh--cccCCCC--CCCHhHHHHHHHcc--CCCCCCCCChHhHhcCccccc
Q 016991          202 VLMAGYLPFGETDLPTLYKKINA--AEFSCPF--WFSTGATSLIHKIL--DPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       202 ~ll~g~~Pf~~~~~~~~~~~i~~--~~~~~p~--~~s~~~~~li~~~L--~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +|++|..||...+.......+..  .....|.  .+++++.+||.+||  ..+|..|++++++++||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence            99999999988776655555442  2344444  47999999999965  455666999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=8e-51  Score=386.60  Aligned_cols=256  Identities=30%  Similarity=0.582  Sum_probs=230.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +|++.+.||+|+||.||+|++..+++.||||++.+.........+....|..++..+ +||+|+++++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            589999999999999999999999999999999876544444455677788888777 5899999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++||+|.+.+...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++............
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~  160 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKT  160 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999998754333334456


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+...+...+......+|..+++++.+++.+||+.|
T Consensus       161 ~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~  239 (323)
T cd05616         161 FCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKH  239 (323)
T ss_pred             CCCChhhcCHHHhcCCCC-CCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccC
Confidence            789999999999987766 4899999999999999999999999988888888988888899999999999999999999


Q ss_pred             CCCCCCh-----HhHhcCccccc
Q 016991          249 PKTRIRI-----EGIRKHPWFRK  266 (379)
Q Consensus       249 P~~R~s~-----~~il~hp~f~~  266 (379)
                      |.+|+++     .++++||||+.
T Consensus       240 p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         240 PGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             HHhcCCCCCCCHHHHhcCCCcCC
Confidence            9999985     89999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-51  Score=388.61  Aligned_cols=254  Identities=31%  Similarity=0.593  Sum_probs=225.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.+++.++||||+++++++...+..|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            57999999999999999999999999999999998765444445577889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++|++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....   ....
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---~~~~  157 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---YANS  157 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---ccCC
Confidence            9999999999998888999999999999999999999999999999999999999999999999999875443   3346


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC------CCCHhHHHH
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF------WFSTGATSL  240 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~------~~s~~~~~l  240 (379)
                      .+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+....  ...|.      .+++++.+|
T Consensus       158 ~~gt~~y~aPE~~~~~~~-~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~l  236 (333)
T cd05600         158 VVGSPDYMAPEVLRGKGY-DFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDL  236 (333)
T ss_pred             cccCccccChhHhcCCCC-CCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHH
Confidence            679999999999987765 489999999999999999999999888777666654322  22232      358999999


Q ss_pred             HHHccCCCCCCCCChHhHhcCccccc
Q 016991          241 IHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      |.+||..+|.+||+++++++||||..
T Consensus       237 i~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         237 ITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             HHHHhhChhhhcCCHHHHHhCcccCC
Confidence            99999999999999999999999985

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=9.4e-51  Score=387.17  Aligned_cols=251  Identities=33%  Similarity=0.626  Sum_probs=221.8

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||.||+|.+..+++.||||++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999876555555567788999999888 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|.+++...+++++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...........+.+||+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875333233445678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET---------DLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---------~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      .|+|||++.+..+ +.++||||+||++|+|++|+.||+..         ......+.+.......|..+++++.++|.+|
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~  239 (329)
T cd05588         161 NYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKGF  239 (329)
T ss_pred             cccCHHHHcCCCC-CCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence            9999999987666 48999999999999999999999632         1223556677777888999999999999999


Q ss_pred             cCCCCCCCCC------hHhHhcCccccc
Q 016991          245 LDPNPKTRIR------IEGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~s------~~~il~hp~f~~  266 (379)
                      |+.||.+|+|      ++++++||||..
T Consensus       240 L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         240 LNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             hccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            9999999997      789999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3e-51  Score=373.67  Aligned_cols=259  Identities=31%  Similarity=0.478  Sum_probs=224.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCC----
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN-IVRLHEVLASRT----   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~-Iv~l~~~~~~~~----   82 (379)
                      +..|+.+++||+|+||+||+|+.+.+|+.||+|.+....-. +.......+|+.+|+.++|+| ||++++++.+.+    
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~   88 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG   88 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence            56788899999999999999999999999999999765422 234456789999999999999 999999998877    


Q ss_pred             --eEEEEEeccCCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           83 --KVYIILEFVTGGELFDKIVHQG----RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~~~----~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                        .+|+|+||+ ..+|..++....    .++...++.+++||+.||+|||++||+||||||+||||+++|.+||+|||+|
T Consensus        89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence              899999999 568999887755    5788899999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----------
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-----------  225 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-----------  225 (379)
                      +....+.......++|.+|+|||++.+...++...||||+|||++||+++++.|++.+...+...|-..           
T Consensus       168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~  247 (323)
T KOG0594|consen  168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG  247 (323)
T ss_pred             HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence            977766666788899999999999999877789999999999999999999999998876665555211           


Q ss_pred             -------ccCCCCC------------CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 -------EFSCPFW------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 -------~~~~p~~------------~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                             ...+|.|            .+++..+++.+||+.+|.+|+|+..+++||||+...
T Consensus       248 v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  248 VSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             ccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence                   1122222            245899999999999999999999999999998654

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.2e-50  Score=384.28  Aligned_cols=251  Identities=33%  Similarity=0.636  Sum_probs=223.2

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh-CCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI-VRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~-l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..+++.||||++.+.........+.+..|..++.. .+||||+++++++...+..|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            469999999999999999999999999987554333444556667777764 4899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~  160 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875443334445678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++||||+||++|+|++|..||.+.+.......+......+|.+++.++.+||.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~-~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         161 DYIAPEILKGQKY-NESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             cccCHHHHcCCCC-CCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            9999999987665 589999999999999999999999988888888888877888999999999999999999999999


Q ss_pred             ChH-hHhcCccccc
Q 016991          254 RIE-GIRKHPWFRK  266 (379)
Q Consensus       254 s~~-~il~hp~f~~  266 (379)
                      ++. ++++||||..
T Consensus       240 ~~~~~l~~h~~~~~  253 (316)
T cd05592         240 GVDGDIRQHPFFRG  253 (316)
T ss_pred             CChHHHHcCcccCC
Confidence            875 8889999975

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.2e-50  Score=378.45  Aligned_cols=255  Identities=29%  Similarity=0.476  Sum_probs=220.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|++.+.||+|+||.||+|.+..+|+.||+|.+.+...........+.+|+.+++.++|+||+++++++...+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            38899999999999999999999999999999977554443344567899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+++|+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++...... ....
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~  159 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-ETVR  159 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-Ceec
Confidence            99999998887643  36899999999999999999999999999999999999999999999999998764332 2234


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP----TLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ..+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...+..    .....+......++..+|+++.+||++
T Consensus       160 ~~~g~~~y~aPE~~~~~~~-~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~  238 (285)
T cd05631         160 GRVGTVGYMAPEVINNEKY-TFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRM  238 (285)
T ss_pred             CCCCCCCccCHhhhcCCCC-CcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHH
Confidence            5679999999999987766 48999999999999999999999875432    333344445556777899999999999


Q ss_pred             ccCCCCCCCCC-----hHhHhcCccccc
Q 016991          244 ILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ||+.||.+||+     ++++++||||..
T Consensus       239 ~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         239 LLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            99999999997     899999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.1e-50  Score=394.36  Aligned_cols=256  Identities=32%  Similarity=0.560  Sum_probs=221.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+++.++||||+++++.+.+.+.+|+||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            46999999999999999999999999999999998765544555678999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC------
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG------  162 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~------  162 (379)
                      ||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......      
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence            99999999999988888999999999999999999999999999999999999999999999999997432100      


Q ss_pred             -----------------------------------------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHH
Q 016991          163 -----------------------------------------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF  201 (379)
Q Consensus       163 -----------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~  201 (379)
                                                               .....+.+||+.|+|||++.+.++. .++||||+||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~DiwSlGvil~  239 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILY  239 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCC-CeeeEEechHHHH
Confidence                                                     0011235799999999999887775 8999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhc--ccCCC--CCCCHhHHHHHHHccCCCCCCCCC---hHhHhcCccccc
Q 016991          202 VLMAGYLPFGETDLPTLYKKINAA--EFSCP--FWFSTGATSLIHKILDPNPKTRIR---IEGIRKHPWFRK  266 (379)
Q Consensus       202 ~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p--~~~s~~~~~li~~~L~~dP~~R~s---~~~il~hp~f~~  266 (379)
                      +|++|++||.+.+.......+...  ....|  ..+++++.++|.+|+ .||.+|++   ++++++||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence            999999999887766555555432  23334  357999999999987 59999997   999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=1.7e-50  Score=380.66  Aligned_cols=258  Identities=27%  Similarity=0.446  Sum_probs=212.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++.......  ....+.+|+.+++.++||||+++++++.+....|+
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   80 (303)
T cd07869           3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL   80 (303)
T ss_pred             ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence            3578999999999999999999999999999999987543222  23457789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  159 (303)
T cd07869          81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT  159 (303)
T ss_pred             EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc
Confidence            999995 5777777654 57899999999999999999999999999999999999999999999999998654433333


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhc--c----------------
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAA--E----------------  226 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~--~----------------  226 (379)
                      ....+|++.|+|||++.+....+.++||||+||++|+|++|..||.+.... .....+...  .                
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (303)
T cd07869         160 YSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFK  239 (303)
T ss_pred             CCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccc
Confidence            455678999999999876655568999999999999999999999875432 222211100  0                


Q ss_pred             ---c--CCC---------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 ---F--SCP---------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ---~--~~p---------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                         +  ..|         ...++++.+||++||+.||++|||+.++++||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         240 PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence               0  001         0135788999999999999999999999999999753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-50  Score=393.94  Aligned_cols=256  Identities=33%  Similarity=0.613  Sum_probs=221.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||+|+||+||+|.+..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            47999999999999999999999999999999997755444555678899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-----
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-----  163 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-----  163 (379)
                      ||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++.......     
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            999999999999888899999999999999999999999999999999999999999999999999985321100     


Q ss_pred             -------c-----------------------------------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHH
Q 016991          164 -------E-----------------------------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF  201 (379)
Q Consensus       164 -------~-----------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~  201 (379)
                             .                                   .....+||+.|+|||++.+..+ +.++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~  239 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGY-GQECDWWSLGAIMF  239 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCC-CCceeeEecchhhh
Confidence                   0                                   0013579999999999987766 58999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhc--ccCCCC--CCCHhHHHHHHHccCCCCCCC---CChHhHhcCccccc
Q 016991          202 VLMAGYLPFGETDLPTLYKKINAA--EFSCPF--WFSTGATSLIHKILDPNPKTR---IRIEGIRKHPWFRK  266 (379)
Q Consensus       202 ~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~--~~s~~~~~li~~~L~~dP~~R---~s~~~il~hp~f~~  266 (379)
                      +|++|.+||.+.+....+..+...  ...+|.  .+++++.+||++||. +|.+|   +|+.+++.||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         240 ECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             hhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            999999999888777766666542  344454  478999999999998 67765   59999999999974

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-51  Score=391.40  Aligned_cols=256  Identities=34%  Similarity=0.652  Sum_probs=227.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||+|+||+||+|.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            47999999999999999999999999999999998765444445677899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-----
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-----  163 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-----  163 (379)
                      ||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......     
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            999999999999888899999999999999999999999999999999999999999999999999987554322     


Q ss_pred             ------------------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH
Q 016991          164 ------------------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY  219 (379)
Q Consensus       164 ------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~  219 (379)
                                              .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~  239 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPY-GLECDWWSLGVILYEMLYGFPPFYSDTLQETY  239 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCCC-CCceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence                                    12345679999999999988765 58999999999999999999999988877777


Q ss_pred             HHHHh--cccCCCCC--CCHhHHHHHHHccCCCCCCCCC-hHhHhcCccccc
Q 016991          220 KKINA--AEFSCPFW--FSTGATSLIHKILDPNPKTRIR-IEGIRKHPWFRK  266 (379)
Q Consensus       220 ~~i~~--~~~~~p~~--~s~~~~~li~~~L~~dP~~R~s-~~~il~hp~f~~  266 (379)
                      ..+..  .....|..  +++++.+||.+||. ||.+|++ ++++++||||+.
T Consensus       240 ~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         240 NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence            77766  44445544  59999999999997 9999999 999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1.7e-50  Score=383.66  Aligned_cols=251  Identities=35%  Similarity=0.672  Sum_probs=226.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..++..||||++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999999999999999876544444556778899999887 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|..++...+.+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.............+|++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~  160 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP  160 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence            99999998888999999999999999999999999999999999999999999999999999865433333345568999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+. .++||||+||++|+|++|+.||.+.+.......+.......|..+++++.+||++||+.||++||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         161 DYIAPEILSYQPYG-PAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             cccCHHHhcCCCCC-cchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcC
Confidence            99999999877664 89999999999999999999999888888888888888888999999999999999999999999


Q ss_pred             Ch-----HhHhcCccccc
Q 016991          254 RI-----EGIRKHPWFRK  266 (379)
Q Consensus       254 s~-----~~il~hp~f~~  266 (379)
                      |+     .++++||||+.
T Consensus       240 s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         240 GCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence            99     99999999975

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2e-50  Score=382.87  Aligned_cols=252  Identities=31%  Similarity=0.589  Sum_probs=223.6

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh-CCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI-VRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~-l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|++..+++.||||++.+.........+....|..+++. ++||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999999999999999987543333334556677888875 5899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTP  160 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecCCc
Confidence            99999998888899999999999999999999999999999999999999999999999999875433333445668999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++||||+||++|+|++|..||.+.+.....+.+.......|.+++.++.++|.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~-~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         161 DYIAPEILLGQKY-NTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             cccCHHHHcCCCC-CchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcC
Confidence            9999999987666 589999999999999999999999888888888888777788889999999999999999999999


Q ss_pred             ChH-hHhcCcccccc
Q 016991          254 RIE-GIRKHPWFRKN  267 (379)
Q Consensus       254 s~~-~il~hp~f~~~  267 (379)
                      ++. ++++||||+..
T Consensus       240 ~~~~~l~~h~~~~~~  254 (316)
T cd05619         240 GVKGDIRQHPFFREI  254 (316)
T ss_pred             CChHHHHcCcccCCC
Confidence            996 89999999763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.6e-50  Score=384.32  Aligned_cols=257  Identities=34%  Similarity=0.633  Sum_probs=223.0

Q ss_pred             CeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~   84 (379)
                      +|++++.||+|+||.||++++.   .+|..||+|++.+.... .....+.+.+|+.+++.++ ||||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999874   57899999999765432 2234567889999999995 99999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-c
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-V  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-~  163 (379)
                      |+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...... .
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            999999999999999988889999999999999999999999999999999999999999999999999998754332 2


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhcccCCCCCCCHhHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET----DLPTLYKKINAAEFSCPFWFSTGATS  239 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~----~~~~~~~~i~~~~~~~p~~~s~~~~~  239 (379)
                      ......+||+.|+|||++.+....+.++|||||||++|+|++|..||...    ........+......+|..+++.+.+
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQD  240 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence            22345689999999999987655568999999999999999999999643    23345556666677788889999999


Q ss_pred             HHHHccCCCCCCCC-----ChHhHhcCccccc
Q 016991          240 LIHKILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       240 li~~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +|.+||+.||++||     +++++++||||+.
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999999999999     7889999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2e-50  Score=390.96  Aligned_cols=261  Identities=31%  Similarity=0.546  Sum_probs=227.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+..++..||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+.+
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            45567999999999999999999999999999999999765444444456688999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |+||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       119 ~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence            999999999999998865 578999999999999999999999999999999999999999999999999987554321 


Q ss_pred             ccccccccCCCCCchhhhccCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC--CCCHh
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRG---YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF--WFSTG  236 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~  236 (379)
                      ......+||+.|+|||++.+..   ..+.++|||||||++|+|++|.+||.+.+....+..+....  ..+|.  .+|.+
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQ  277 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHH
Confidence            1234568999999999986542   34689999999999999999999999988887888776543  44555  47999


Q ss_pred             HHHHHHHccCCCCCC--CCChHhHhcCccccc
Q 016991          237 ATSLIHKILDPNPKT--RIRIEGIRKHPWFRK  266 (379)
Q Consensus       237 ~~~li~~~L~~dP~~--R~s~~~il~hp~f~~  266 (379)
                      +.+||++||+.+|.+  |+|++++++||||+.
T Consensus       278 ~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         278 AKDLICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             HHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence            999999999999998  999999999999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.8e-50  Score=384.23  Aligned_cols=252  Identities=36%  Similarity=0.655  Sum_probs=225.1

Q ss_pred             eeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           14 GRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILK-HRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      ++.||+|+||.||++.+.   .+++.||||++.+..... ......+.+|+.+|+.++||||+++++++..++..|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            368999999999999874   578999999997654322 2234567899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      |++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.............
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            99999999999988899999999999999999999999999999999999999999999999999987543333344556


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP  249 (379)
                      +||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+.......|..+++++.+||.+||+.||
T Consensus       161 ~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  239 (323)
T cd05584         161 CGTIEYMAPEILMRSGH-GKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNP  239 (323)
T ss_pred             CCCccccChhhccCCCC-CCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            89999999999987665 58999999999999999999999998888888888888888999999999999999999999


Q ss_pred             CCCC-----ChHhHhcCccccc
Q 016991          250 KTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       250 ~~R~-----s~~~il~hp~f~~  266 (379)
                      .+||     +++++++||||+.
T Consensus       240 ~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         240 SSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             hHcCCCCCCCHHHHhcCCCcCC
Confidence            9999     8999999999975

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=3.3e-50  Score=382.42  Aligned_cols=256  Identities=30%  Similarity=0.586  Sum_probs=229.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +|++.+.||+|+||+||+|.+..+|+.||||++.+.........+.+..|+.+++.+. |++|+++++++...+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            4788999999999999999999999999999998765444445567788899998886 577889999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~  160 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRT  160 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccC
Confidence            99999999999988889999999999999999999999999999999999999999999999999998754333233445


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+.+.....+.+.......|..+++++.+++.+||+.|
T Consensus       161 ~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~  239 (323)
T cd05615         161 FCGTPDYIAPEIIAYQPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKH  239 (323)
T ss_pred             ccCCccccCHHHHcCCCC-CCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccC
Confidence            679999999999987665 5899999999999999999999999888888888888888889999999999999999999


Q ss_pred             CCCCCCh-----HhHhcCccccc
Q 016991          249 PKTRIRI-----EGIRKHPWFRK  266 (379)
Q Consensus       249 P~~R~s~-----~~il~hp~f~~  266 (379)
                      |.+|+++     +++++||||+.
T Consensus       240 p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         240 PSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             HhhCCCCCCCCHHHHhcCcccCC
Confidence            9999974     78999999975

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.6e-50  Score=384.62  Aligned_cols=251  Identities=34%  Similarity=0.590  Sum_probs=222.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-IMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..+|+.||||++.+...........+..|.. +++.++||||+++++.+...+..|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            47999999999999999999999999998755433333455555555 56789999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP  160 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence            99999998888999999999999999999999999999999999999999999999999999875433333445668999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....+..+.......+..+++++.++|.+||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~-~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (323)
T cd05575         161 EYLAPEVLRKQPY-DRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRL  239 (323)
T ss_pred             hhcChhhhcCCCC-CccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCC
Confidence            9999999987666 489999999999999999999999988888888888888888888999999999999999999999


Q ss_pred             Ch----HhHhcCccccc
Q 016991          254 RI----EGIRKHPWFRK  266 (379)
Q Consensus       254 s~----~~il~hp~f~~  266 (379)
                      ++    .++++||||..
T Consensus       240 ~~~~~~~~il~~~~~~~  256 (323)
T cd05575         240 GAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             CCCCCHHHHHcCCCcCC
Confidence            98    69999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=3e-50  Score=383.71  Aligned_cols=251  Identities=33%  Similarity=0.615  Sum_probs=220.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999876555555567788999988776 799999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|..++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.............+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP  160 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875433333345678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET---------DLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---------~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      .|+|||++.+..+ +.++|||||||++|+|++|..||...         ......+.+......+|..++..+.+||++|
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~  239 (329)
T cd05618         161 NYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF  239 (329)
T ss_pred             cccCHHHHcCCCC-CCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence            9999999987666 48999999999999999999999521         1223556677777888999999999999999


Q ss_pred             cCCCCCCCCC------hHhHhcCccccc
Q 016991          245 LDPNPKTRIR------IEGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~s------~~~il~hp~f~~  266 (379)
                      |+.||.+|++      ++++++||||+.
T Consensus       240 L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         240 LNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             hcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            9999999998      479999999965

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3.5e-50  Score=375.16  Aligned_cols=254  Identities=31%  Similarity=0.453  Sum_probs=213.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|++..+++.||+|++...... ....+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence            4799999999999999999999999999999998764322 234467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-cccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-ELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~~~~  167 (379)
                      ||++++.+..+......+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++....... ....
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (287)
T cd07848          80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYT  159 (287)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccc
Confidence            999988776555555679999999999999999999999999999999999999999999999999987654321 2233


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-------------------cC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-------------------FS  228 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------------~~  228 (379)
                      ..+|++.|+|||++.+..+ +.++||||+||++|+|++|++||.+.+.......+....                   ..
T Consensus       160 ~~~~~~~y~aPE~~~~~~~-~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07848         160 EYVATRWYRSPELLLGAPY-GKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR  238 (287)
T ss_pred             ccccccccCCcHHHcCCCC-CCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence            5679999999999987766 589999999999999999999998765433222221100                   00


Q ss_pred             CC-------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 CP-------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 ~p-------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .|             ..+|+++.+||++||++||++|||++++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            11             1268889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.8e-50  Score=389.81  Aligned_cols=262  Identities=32%  Similarity=0.567  Sum_probs=226.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+
T Consensus        39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            34567999999999999999999999999999999999765444444456688999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-c
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-V  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-~  163 (379)
                      |+||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .
T Consensus       119 ~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCc
Confidence            999999999999998865 57899999999999999999999999999999999999999999999999998765432 1


Q ss_pred             ccccccccCCCCCchhhhccCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC--CCCHh
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRG---YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF--WFSTG  236 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~  236 (379)
                      ....+.+||+.|+|||++.+.+   +.+.++||||+||++|+|++|..||.+.+....+..+....  +.+|.  .++..
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~  277 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKH  277 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHH
Confidence            2234678999999999997543   34689999999999999999999999888777777776533  44554  46999


Q ss_pred             HHHHHHHccCCCCCC--CCChHhHhcCcccccc
Q 016991          237 ATSLIHKILDPNPKT--RIRIEGIRKHPWFRKN  267 (379)
Q Consensus       237 ~~~li~~~L~~dP~~--R~s~~~il~hp~f~~~  267 (379)
                      ++++|.+||..+|.+  |+|++++++||||+..
T Consensus       278 ~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         278 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            999999999866654  8999999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=2e-50  Score=391.78  Aligned_cols=256  Identities=30%  Similarity=0.540  Sum_probs=221.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.+|+.++||||+++++.+.+++.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            47999999999999999999999999999999997655444445567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC------
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG------  162 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~------  162 (379)
                      ||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......      
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            99999999999998889999999999999999999999999999999999999999999999999997422100      


Q ss_pred             -------------------------------------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh
Q 016991          163 -------------------------------------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA  205 (379)
Q Consensus       163 -------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~  205 (379)
                                                           .......+||+.|+|||++.+..+ +.++|||||||++|+|++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvilyell~  239 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLV  239 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCC-Ccceeeeeccceeeehhh
Confidence                                                 000123579999999999987766 489999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHhc--ccCCCC--CCCHhHHHHHHHccCCCCCCCC---ChHhHhcCccccc
Q 016991          206 GYLPFGETDLPTLYKKINAA--EFSCPF--WFSTGATSLIHKILDPNPKTRI---RIEGIRKHPWFRK  266 (379)
Q Consensus       206 g~~Pf~~~~~~~~~~~i~~~--~~~~p~--~~s~~~~~li~~~L~~dP~~R~---s~~~il~hp~f~~  266 (379)
                      |+.||.+.+.......+...  ....|.  .+++++.++|.+|+ .+|.+|+   ++.++++||||+.
T Consensus       240 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         240 GQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             CCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            99999988776655555432  223333  57999999999977 5999999   9999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.2e-50  Score=389.29  Aligned_cols=256  Identities=34%  Similarity=0.628  Sum_probs=223.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.++..++||||+++++.+.+.+.+|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47999999999999999999999999999999998655444455678899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-----
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-----  163 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-----  163 (379)
                      ||++||+|.+++.+.+.+++..++.++.|++.||+|||++||+||||||+|||++.+|.++|+|||++.......     
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            999999999999988899999999999999999999999999999999999999999999999999986432110     


Q ss_pred             ------------------------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          164 ------------------------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       164 ------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                                                    ....+.+||+.|+|||++.+.++. .++|||||||++|+|++|++||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN-KLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCC-CcceeccccceeeecccCCCCCCCC
Confidence                                          011245799999999999887765 8999999999999999999999988


Q ss_pred             ChHHHHHHHHhc--ccCCCC--CCCHhHHHHHHHccCCCCCCCCC---hHhHhcCccccc
Q 016991          214 DLPTLYKKINAA--EFSCPF--WFSTGATSLIHKILDPNPKTRIR---IEGIRKHPWFRK  266 (379)
Q Consensus       214 ~~~~~~~~i~~~--~~~~p~--~~s~~~~~li~~~L~~dP~~R~s---~~~il~hp~f~~  266 (379)
                      +....+..+...  ...+|.  .+|+++.+||.+|+. ||.+|++   ++++++||||+.
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         240 TPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             CHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence            877777776643  234444  379999999999885 9999984   799999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=4e-50  Score=382.11  Aligned_cols=251  Identities=34%  Similarity=0.596  Sum_probs=222.4

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-IMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..+|+.||||++.+...........+..|.. +++.++||||+++++.+...+..|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            46999999999999999999999999997754433334455566655 46789999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.............+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~  160 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP  160 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence            99999998888999999999999999999999999999999999999999999999999999875433333445678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+. .++|||||||++|+|++|..||...+...+++.+.......++..+..+.++|++||+.||.+||
T Consensus       161 ~y~aPE~~~~~~~~-~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~  239 (325)
T cd05604         161 EYLAPEVIRKQPYD-NTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRL  239 (325)
T ss_pred             hhCCHHHHcCCCCC-CcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcC
Confidence            99999999877664 89999999999999999999999988888888888877777788999999999999999999999


Q ss_pred             Ch----HhHhcCccccc
Q 016991          254 RI----EGIRKHPWFRK  266 (379)
Q Consensus       254 s~----~~il~hp~f~~  266 (379)
                      ++    .++++||||..
T Consensus       240 ~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         240 GAKEDFLEIQEHPFFES  256 (325)
T ss_pred             CCCCCHHHHhcCCCcCC
Confidence            87    58999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=7.6e-50  Score=379.49  Aligned_cols=251  Identities=35%  Similarity=0.609  Sum_probs=222.5

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-IMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||.||+|++..+|+.||+|++.+...........+.+|+. +++.++||||+++++++.+.+..|+||||++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            47999999999999999999999999998755443333445555554 67889999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      ++|...+.....+++..++.++.||+.||.|||+.||+||||||+||+++.+|.+||+|||++.............+||+
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP  160 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence            99999998888899999999999999999999999999999999999999999999999999875433333445668999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..++ .++|||||||++|+|++|..||.+.+....+..+......+|...+.++.++|.+||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (321)
T cd05603         161 EYLAPEVLRKEPYD-RTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRL  239 (321)
T ss_pred             ccCCHHHhcCCCCC-CcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcC
Confidence            99999999876664 89999999999999999999999988888888888888888888999999999999999999999


Q ss_pred             Ch----HhHhcCccccc
Q 016991          254 RI----EGIRKHPWFRK  266 (379)
Q Consensus       254 s~----~~il~hp~f~~  266 (379)
                      ++    .++++||||..
T Consensus       240 ~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         240 GAKADFLEIKNHVFFSP  256 (321)
T ss_pred             CCCCCHHHHhCCCCcCC
Confidence            76    49999999974

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-50  Score=384.16  Aligned_cols=250  Identities=33%  Similarity=0.594  Sum_probs=220.9

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l---~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      ||+|+||+||+|++..+|+.||||++.+..............|..++...   +||||+++++++...+..|+||||++|
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999999999999999999765544433444556677777655   699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.............+||+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~  160 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTT  160 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCCc
Confidence            99999999888999999999999999999999999999999999999999999999999999875444334455678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC-CCCHhHHHHHHHccCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF-WFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~-~~s~~~~~li~~~L~~dP~~R  252 (379)
                      .|+|||++.+....+.++|||||||++|+|++|..||.+.+....++.+......+|. .+++++.+||++||.+||.+|
T Consensus       161 ~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         161 EYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             cccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHC
Confidence            9999999976554568999999999999999999999998888888888877777765 479999999999999999999


Q ss_pred             C----ChHhHhcCccccc
Q 016991          253 I----RIEGIRKHPWFRK  266 (379)
Q Consensus       253 ~----s~~~il~hp~f~~  266 (379)
                      |    ++.++++||||..
T Consensus       241 ~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         241 LGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             CCCCCCHHHHhcCccccC
Confidence            8    7899999999975

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.3e-49  Score=378.96  Aligned_cols=251  Identities=31%  Similarity=0.604  Sum_probs=221.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|.+..+++.||+|++.+.........+.+.+|+.++..+ +||||+++++++...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999876555555667788999999888 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  160 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTP  160 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccCCc
Confidence            99999998888999999999999999999999999999999999999999999999999999875333333445678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHhcccCCCCCCCHhHHHHHHHccC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET-------DLPTLYKKINAAEFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~-------~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  246 (379)
                      .|+|||++.+..+ +.++|||||||++|+|++|..||...       ......+.+......+|..+|..+.++|.+||+
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~  239 (327)
T cd05617         161 NYIAPEILRGEEY-GFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLN  239 (327)
T ss_pred             ccCCHHHHCCCCC-CchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhc
Confidence            9999999987666 58999999999999999999999532       223456666777778888999999999999999


Q ss_pred             CCCCCCCC------hHhHhcCccccc
Q 016991          247 PNPKTRIR------IEGIRKHPWFRK  266 (379)
Q Consensus       247 ~dP~~R~s------~~~il~hp~f~~  266 (379)
                      .||.+|++      ++++++||||+.
T Consensus       240 ~dP~~R~~~~~~~~~~~i~~h~~f~~  265 (327)
T cd05617         240 KDPKERLGCQPQTGFSDIKSHTFFRS  265 (327)
T ss_pred             cCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence            99999998      479999999975

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-51  Score=415.55  Aligned_cols=260  Identities=33%  Similarity=0.565  Sum_probs=237.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|+|++.||+|+||.|.+++.+.|++.||+|++++-...+......+..|..+|..-+.+-|+.++..|++..++|+
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEE
Confidence            45789999999999999999999999999999999988665555556779999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-Cccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-GVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-~~~~  165 (379)
                      ||||++||+|...+.+.+++||+.+++|+..|+.||.-||+.|+|||||||+|||||..|++||+|||.|-.+.. +.-.
T Consensus       153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~  232 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVR  232 (1317)
T ss_pred             EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEE
Confidence            999999999999999988999999999999999999999999999999999999999999999999998876653 4455


Q ss_pred             ccccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCC--CCCCHhH
Q 016991          166 LHTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCP--FWFSTGA  237 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p--~~~s~~~  237 (379)
                      ....+|||.|.+||++..    .+.+|..+|+||+||++|||+.|..||...+....|.+|...  .+.+|  ..+|+++
T Consensus       233 s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeea  312 (1317)
T KOG0612|consen  233 SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEA  312 (1317)
T ss_pred             eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHH
Confidence            678899999999999953    356789999999999999999999999999999999999876  67788  5689999


Q ss_pred             HHHHHHccCCCCCCCCC---hHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIR---IEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s---~~~il~hp~f~~~  267 (379)
                      ++||.++|. +|..|..   ++++..||||...
T Consensus       313 kdLI~~ll~-~~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  313 KDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             HHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence            999999885 7888988   9999999999763

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.7e-50  Score=382.31  Aligned_cols=257  Identities=32%  Similarity=0.575  Sum_probs=224.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||+||+|.+..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            47999999999999999999999999999999998765544455677899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-cc
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-LL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-~~  166 (379)
                      ||++||+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........ ..
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence            999999999999876 6899999999999999999999999999999999999999999999999999876543222 23


Q ss_pred             cccccCCCCCchhhhcc-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCC--CCCCHhH
Q 016991          167 HTTCGTPNYVAPEVLSN-----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCP--FWFSTGA  237 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~-----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p--~~~s~~~  237 (379)
                      ...+||+.|+|||++..     ....+.++|||||||++|+|++|..||...+....+..+....  ..+|  ..+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDF  240 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHH
Confidence            34579999999999863     2334589999999999999999999998887777666665432  2233  3579999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .+||.+||. ||.+|||++++++||||..
T Consensus       241 ~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         241 LDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             HHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            999999998 9999999999999999975

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.3e-49  Score=378.59  Aligned_cols=251  Identities=33%  Similarity=0.584  Sum_probs=220.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-IMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||++|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            47999999999999999999999999998654433333344444544 56889999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.............+||+
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~  160 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP  160 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence            99999999888899999999999999999999999999999999999999999999999999875433333445678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+....+..+.......+..+++.+.++|.+||+.||.+|+
T Consensus       161 ~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~  239 (325)
T cd05602         161 EYLAPEVLHKQPY-DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL  239 (325)
T ss_pred             cccCHHHHcCCCC-CCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCC
Confidence            9999999987666 489999999999999999999999988888888888777778888999999999999999999999


Q ss_pred             ChH----hHhcCccccc
Q 016991          254 RIE----GIRKHPWFRK  266 (379)
Q Consensus       254 s~~----~il~hp~f~~  266 (379)
                      ++.    ++++|+||..
T Consensus       240 ~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         240 GAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             CCCCCHHHHhcCcccCC
Confidence            876    8999999964

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=7.1e-50  Score=379.20  Aligned_cols=251  Identities=38%  Similarity=0.662  Sum_probs=224.2

Q ss_pred             eeeecccCCeEEEEEEE---CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           14 GRTIGEGTFAKVRFAQN---RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~---~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      ++.||+|+||.||++.+   ..+|+.||+|++.+..... .....+.+|+.+++.++||||+++++++...+..|+||||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   79 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDF   79 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcC
Confidence            36799999999999886   3678999999997654322 2335677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccc
Q 016991           91 VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC  170 (379)
Q Consensus        91 ~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~  170 (379)
                      ++||+|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.............+
T Consensus        80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  159 (318)
T cd05582          80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC  159 (318)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence            99999999998888899999999999999999999999999999999999999999999999999876544333445678


Q ss_pred             cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCC
Q 016991          171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK  250 (379)
Q Consensus       171 gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~  250 (379)
                      |++.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+.......|..+++++.+||++||+.||.
T Consensus       160 g~~~y~aPE~~~~~~~-~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         160 GTVEYMAPEVVNRRGH-TQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             CChhhcCHHHHcCCCC-CCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHh
Confidence            9999999999987666 489999999999999999999999888888888888888888999999999999999999999


Q ss_pred             CCCC-----hHhHhcCccccc
Q 016991          251 TRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       251 ~R~s-----~~~il~hp~f~~  266 (379)
                      +||+     +++++.||||+.
T Consensus       239 ~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCcCC
Confidence            9999     677999999975

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.4e-49  Score=368.89  Aligned_cols=249  Identities=31%  Similarity=0.516  Sum_probs=215.6

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||+|+||+||++.+..+|+.||+|.+.+.........+.+..|+.+++.++||||+++.+++......|+||||++||+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            79999999999999999999999999765544444456778899999999999999999999999999999999999999


Q ss_pred             HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccC
Q 016991           97 FDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT  172 (379)
Q Consensus        97 ~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt  172 (379)
                      .+.+..    ...+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..............||
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~  160 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGT  160 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCCC
Confidence            887743    3568999999999999999999999999999999999999999999999999987654443334456799


Q ss_pred             CCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       173 ~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      +.|+|||++.+..++ .++||||+||++|+|++|+.||...+.    ......+.......|..+++++.+++.+||+.|
T Consensus       161 ~~y~aPE~~~~~~~~-~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  239 (280)
T cd05608         161 PGFMAPELLQGEEYD-FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKD  239 (280)
T ss_pred             cCccCHHHhcCCCCC-ccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCC
Confidence            999999999877664 899999999999999999999976542    233344444555667789999999999999999


Q ss_pred             CCCCC-----ChHhHhcCccccc
Q 016991          249 PKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       249 P~~R~-----s~~~il~hp~f~~  266 (379)
                      |.+||     +++++++||||+.
T Consensus       240 P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         240 PEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             HHHhcCCCCCCHHHHhcChhhhc
Confidence            99999     8899999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.1e-49  Score=381.81  Aligned_cols=261  Identities=32%  Similarity=0.558  Sum_probs=224.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.++||||+++++.+.+.+.+|
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~  119 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  119 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence            34579999999999999999999999999999999997654444444566889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-cc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-VE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-~~  164 (379)
                      +||||++||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...... ..
T Consensus       120 lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~  198 (371)
T cd05622         120 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV  198 (371)
T ss_pred             EEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence            99999999999998865 56899999999999999999999999999999999999999999999999998755432 12


Q ss_pred             cccccccCCCCCchhhhccCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC--CCCHhH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRG---YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF--WFSTGA  237 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~~  237 (379)
                      ...+.+||+.|+|||++....   ..+.++|||||||++|+|++|.+||.+.+....+..+....  ..+|.  .+|.++
T Consensus       199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  278 (371)
T cd05622         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA  278 (371)
T ss_pred             cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHH
Confidence            234668999999999997543   34689999999999999999999999988887787776543  33443  589999


Q ss_pred             HHHHHHccCCCCCC--CCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKT--RIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~--R~s~~~il~hp~f~~~  267 (379)
                      ++||.+||..++.+  |++++++++||||+..
T Consensus       279 ~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         279 KNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            99999999854443  7899999999999763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-51  Score=381.26  Aligned_cols=255  Identities=28%  Similarity=0.444  Sum_probs=228.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ..|+..+.||+|+||.||+|.+..+++.||||+++.+....  .++.+.+|+.+|..++++||.++|+.+..+..++++|
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d--eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED--EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcch--hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence            36888899999999999999999999999999999876443  5688999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |||.||++.+.+...+.+.|..+..++++++.||.|||+.+.+|||||+.|||+..+|.+||+|||.+...........+
T Consensus        91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t  170 (467)
T KOG0201|consen   91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT  170 (467)
T ss_pred             HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence            99999999999998888899999999999999999999999999999999999999999999999999877665444588


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      .+|||.|||||++...+|+ .++||||||++.+||++|.+||.+...+...-.|-.. .+.....+|+.+++|+..||+.
T Consensus       171 fvGTPfwMAPEVI~~~~Y~-~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k  249 (467)
T KOG0201|consen  171 FVGTPFWMAPEVIKQSGYD-TKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDK  249 (467)
T ss_pred             ccccccccchhhhcccccc-chhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhc
Confidence            9999999999999977876 9999999999999999999999887764443333322 2233346899999999999999


Q ss_pred             CCCCCCChHhHhcCccccc
Q 016991          248 NPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       248 dP~~R~s~~~il~hp~f~~  266 (379)
                      ||+.||+|.++|+|+|++.
T Consensus       250 ~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  250 NPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             CcccCcCHHHHhhhHHHHh
Confidence            9999999999999999986

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.6e-49  Score=374.17  Aligned_cols=256  Identities=27%  Similarity=0.457  Sum_probs=209.7

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----CeE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----TKV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----~~~   84 (379)
                      +|++.+.||+|+||.||+|++..+|..||||++..... .......+.+|+.+++.++||||+++++++...     ..+
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   79 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI   79 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence            69999999999999999999999999999999864322 222345688999999999999999999987543     358


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--  162 (379)
                      |+||||+ +++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  
T Consensus        80 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          80 YVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence            9999999 5689999988888999999999999999999999999999999999999999999999999998754321  


Q ss_pred             -cccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH---------------hc
Q 016991          163 -VELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN---------------AA  225 (379)
Q Consensus       163 -~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~---------------~~  225 (379)
                       .......+||+.|+|||++.+. ...+.++|||||||++|+|++|++||.+.+.......+.               ..
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNE  238 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence             1122456799999999998652 334589999999999999999999997765432221110               00


Q ss_pred             -----------ccCCC-----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          226 -----------EFSCP-----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       226 -----------~~~~p-----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                 ....+     +.+++++.++|.+||+.||++|||++++++||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         239 KARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             hHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence                       00000     1357889999999999999999999999999999754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-48  Score=373.05  Aligned_cols=258  Identities=29%  Similarity=0.545  Sum_probs=220.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||++.+..+++.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            47999999999999999999999999999999998654444445567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-ccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-ELL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~~~  166 (379)
                      ||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence            99999999999976 4579999999999999999999999999999999999999999999999999986543321 122


Q ss_pred             cccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCC---CCCCHhH
Q 016991          167 HTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCP---FWFSTGA  237 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p---~~~s~~~  237 (379)
                      ...+||+.|+|||++..    .+..+.++||||+||++|+|++|+.||.+.+....+..+....  +.+|   ..+|+++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEA  240 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHH
Confidence            33579999999999963    2344689999999999999999999999888777776665432  2333   2479999


Q ss_pred             HHHHHHccCCCCC--CCCChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPK--TRIRIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~--~R~s~~~il~hp~f~~  266 (379)
                      +++|++||..++.  .|++++++++||||..
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         241 KDLIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             HHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence            9999999976444  3889999999999965

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.5e-48  Score=370.70  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=218.9

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||++++..+|..||+|++....  .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            4578999999999999999999999999999999987542  23345679999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||++|++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.....  ..
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~--~~  158 (331)
T cd06649          81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SM  158 (331)
T ss_pred             EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccc--cc
Confidence            999999999999998888899999999999999999999986 699999999999999999999999999875433  22


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------------------
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA---------------------  224 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~---------------------  224 (379)
                      ....+|++.|+|||++.+..+ +.++||||+||++|+|++|+.||...+...+...+..                     
T Consensus       159 ~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (331)
T cd06649         159 ANSFVGTRSYMSPERLQGTHY-SVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPG  237 (331)
T ss_pred             cccCCCCcCcCCHhHhcCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccc
Confidence            345679999999999987665 4899999999999999999999976654433222111                     


Q ss_pred             -------------------------c-ccCC-CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          225 -------------------------A-EFSC-PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       225 -------------------------~-~~~~-p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                               . .... ...+++++.+||.+||+.||++|||+++|++||||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         238 RPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             ccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                                     0 0111 12368899999999999999999999999999999753

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-48  Score=364.55  Aligned_cols=255  Identities=29%  Similarity=0.490  Sum_probs=219.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++.++||||+++++.+...+.+|+|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            48999999999999999999999999999999976544433344567889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |++||+|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++...... ....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~  159 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG-ETIR  159 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-Cccc
Confidence            99999999888654  46899999999999999999999999999999999999999999999999998764332 2224


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT----LYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~----~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ..+|++.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+...    ....+.......|..+++.+.+||.+
T Consensus       160 ~~~~~~~y~aPE~~~~~~~-~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (285)
T cd05605         160 GRVGTVGYMAPEVVKNERY-TFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQ  238 (285)
T ss_pred             cccCCCCccCcHHhcCCCC-CccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHH
Confidence            5579999999999977665 588999999999999999999998765432    23334444455667789999999999


Q ss_pred             ccCCCCCCCC-----ChHhHhcCccccc
Q 016991          244 ILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      ||+.||.+||     +++++++||||..
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         239 LLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            9999999999     8999999999974

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.9e-48  Score=367.79  Aligned_cols=260  Identities=27%  Similarity=0.432  Sum_probs=216.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|.+.+.||+|+||.||+|.+..+++.||+|.+.......  ....+.+|+.+++.++||||+++++++...+..|
T Consensus         3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEE
Confidence            45788999999999999999999999999999999987543222  2345678999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            99999965 788877654 4588999999999999999999999999999999999999999999999999876544333


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------  225 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------  225 (379)
                      ......+++.|+|||++.+....+.++||||+||++|+|++|++||.+.+.......+...                   
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFK  239 (309)
T ss_pred             ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhh
Confidence            3445678999999999876555568999999999999999999999877654333222110                   


Q ss_pred             ccCCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 EFSCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 ~~~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ....|           ..+++++.+||.+||+.||.+|||++|+++||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         240 NYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence            01111           23688999999999999999999999999999998643

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-50  Score=356.11  Aligned_cols=257  Identities=36%  Similarity=0.648  Sum_probs=223.7

Q ss_pred             cceeccCeeee-eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-
Q 016991            4 QTRRVAKYEVG-RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS-   80 (379)
Q Consensus         4 ~~~~~~~y~~~-~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~-   80 (379)
                      +....++|.+- ++||-|-.|+|..+.++.||+.+|+|++.-.        ...++|+++.-+. .|||||.+++++++ 
T Consensus        56 ~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs  127 (400)
T KOG0604|consen   56 EYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENS  127 (400)
T ss_pred             cccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence            34466788885 6799999999999999999999999987432        4567888886555 59999999999863 


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeEEee
Q 016991           81 ---RTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSD  152 (379)
Q Consensus        81 ---~~~~~lv~E~~~gg~L~~~l~~~~~--l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lkl~D  152 (379)
                         ...+.+|||.++||+|+..+..++.  ++|.++..+++||..|+.|||+.+|+||||||||+|...+   ..+||+|
T Consensus       128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence               4678899999999999999998775  9999999999999999999999999999999999999754   4699999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcccC
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEFS  228 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~  228 (379)
                      ||+++.... ...+.+.|-||.|+|||++....|+ ..+|+||+|||+|-||+|++||....    ...+..+|..+.|.
T Consensus       208 fGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKyd-kscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~  285 (400)
T KOG0604|consen  208 FGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYE  285 (400)
T ss_pred             cccccccCC-CccccCCcccccccCHHHhCchhcC-CCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCcc
Confidence            999987654 3567899999999999999877775 89999999999999999999996543    35678889999888


Q ss_pred             CCC--C--CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          229 CPF--W--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       229 ~p~--~--~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      +|.  |  +|.+++|+|+++|..+|.+|+|+++++.|||+......
T Consensus       286 FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~v  331 (400)
T KOG0604|consen  286 FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAV  331 (400)
T ss_pred             CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccC
Confidence            774  4  79999999999999999999999999999999875543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1e-48  Score=372.44  Aligned_cols=249  Identities=27%  Similarity=0.437  Sum_probs=217.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcE-EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-eEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGES-VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-KVY   85 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~-vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-~~~   85 (379)
                      .....+.+.||.|+||+||+|.+.  |.. ||||++......... .+.+.+|+.+|.+++|||||++++++.+.. .+.
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~  116 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLC  116 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceE
Confidence            445667788999999999999997  555 999999876655444 678999999999999999999999999887 799


Q ss_pred             EEEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeecCCCCcEEEccCC-CeEEeeeccccCCCC
Q 016991           86 IILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKG-VYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQ  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~g-i~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~  161 (379)
                      +||||+++|+|.+++..  ...++...+..++.||+.|++|||+++ |+||||||+|||++.++ ++||+|||+++....
T Consensus       117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI  196 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence            99999999999999987  678999999999999999999999999 99999999999999998 999999999987655


Q ss_pred             CcccccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH--HhcccCCCCCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI--NAAEFSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~  237 (379)
                      .........||+.|||||++.+  ..| +.++||||+||+||||++|+.||.+.........+  ......+|..+++.+
T Consensus       197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~-~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l  275 (362)
T KOG0192|consen  197 SKTSMTSVAGTYRWMAPEVLRGEKSPY-TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHL  275 (362)
T ss_pred             ccccccCCCCCccccChhhhcCCCCcC-CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHH
Confidence            3233344789999999999984  455 59999999999999999999999988765444433  344566788899999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..|+.+|++.||.+||++.+|+.
T Consensus       276 ~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  276 SSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHHHHhCCCCCCcCCCHHHHHH
Confidence            99999999999999999999875

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.5e-48  Score=378.50  Aligned_cols=253  Identities=23%  Similarity=0.326  Sum_probs=209.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||+|.+..+++.||||....         ..+.+|+.+++.++||||+++++++......+
T Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence            345689999999999999999999999999999996432         34678999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-Ccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-GVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-~~~  164 (379)
                      +|+|++ +++|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... ...
T Consensus       160 lv~e~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        160 LILPRY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             EEEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            999999 578999998888899999999999999999999999999999999999999999999999999865332 222


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHH---------------
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-------LPTLYKKI---------------  222 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-------~~~~~~~i---------------  222 (379)
                      .....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||...+       .......+               
T Consensus       239 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~  317 (391)
T PHA03212        239 KYYGWAGTIATNAPELLARDPY-GPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA  317 (391)
T ss_pred             ccccccCccCCCChhhhcCCCC-CcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence            3345689999999999987665 589999999999999999998874321       00111111               


Q ss_pred             -----------Hhccc----CCCC-----CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          223 -----------NAAEF----SCPF-----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       223 -----------~~~~~----~~p~-----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                 .....    ..|.     .++.++.+||.+||+.||.+|||++|+++||||+....
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~  384 (391)
T PHA03212        318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD  384 (391)
T ss_pred             hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence                       00000    1111     24668899999999999999999999999999986543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-49  Score=363.39  Aligned_cols=253  Identities=33%  Similarity=0.504  Sum_probs=213.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----e
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-----K   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-----~   83 (379)
                      =.|+-.+.+|.|+||.||.|....+++.||||.+-.+.-.+       .+|+.+|+.+.|||||++..+|....     .
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~   96 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY   96 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence            35888999999999999999999999999999886554332       37999999999999999998885322     4


Q ss_pred             EEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeeccccC
Q 016991           84 VYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSAL  158 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~~  158 (379)
                      ..+||||++ .+|.+.+..    +.+++.-.++-|.+||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+.
T Consensus        97 lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen   97 LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            568999995 588888874    5789999999999999999999999999999999999999976 8999999999988


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh------------c-
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA------------A-  225 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~------------~-  225 (379)
                      ...+... .++..|..|+|||.+.+...++.+.||||+|||+.||+.|++.|.+.+...+...|..            . 
T Consensus       176 L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn  254 (364)
T KOG0658|consen  176 LVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMN  254 (364)
T ss_pred             eccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcC
Confidence            7665443 6778899999999999988888999999999999999999999999876544433311            0 


Q ss_pred             ----ccCCC------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          226 ----EFSCP------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       226 ----~~~~p------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                          +..+|            ...++++.+|+.++|+.+|.+|.++.|++.||||..-..+
T Consensus       255 ~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  255 PNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             cccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence                11111            2368999999999999999999999999999999765433

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=9.6e-49  Score=387.10  Aligned_cols=252  Identities=28%  Similarity=0.370  Sum_probs=206.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR------   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~------   81 (379)
                      .++|++++.||+|+||.||+|.+..+++.||||.+....       ....+|+.+|+.++||||+++++++...      
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~  137 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE  137 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence            457999999999999999999999999999999885432       2345799999999999999999887432      


Q ss_pred             --CeEEEEEeccCCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeec
Q 016991           82 --TKVYIILEFVTGGELFDKIV----HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFG  154 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~----~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfG  154 (379)
                        ..+++||||+++ +|.+.+.    ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus       138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFG  216 (440)
T PTZ00036        138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFG  216 (440)
T ss_pred             CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence              257799999965 6666654    346799999999999999999999999999999999999999765 69999999


Q ss_pred             cccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------
Q 016991          155 LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------  225 (379)
Q Consensus       155 l~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------  225 (379)
                      ++....... .....+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+.......+...         
T Consensus       217 la~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~  295 (440)
T PTZ00036        217 SAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL  295 (440)
T ss_pred             cchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            997654332 2335678999999999877655568999999999999999999999887654433332110         


Q ss_pred             --------cc------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 --------EF------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 --------~~------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                              ..            .+|...++++.+||.+||+.||.+|||+.|+++||||+...
T Consensus       296 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        296 KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             HHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence                    01            13445688999999999999999999999999999997643

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.9e-50  Score=378.34  Aligned_cols=259  Identities=27%  Similarity=0.474  Sum_probs=240.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe-EE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK-VY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~-~~   85 (379)
                      .++.|+.++.+|+|+||.+++++++.++..|++|.++........ .+...+|+.++++++|||||.+.+.|..++. ++
T Consensus         2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~   80 (426)
T KOG0589|consen    2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLC   80 (426)
T ss_pred             ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEE
Confidence            367899999999999999999999999999999999887655443 3578899999999999999999999998887 99


Q ss_pred             EEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           86 IILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |||+||+||++.+.|...+  -++|+.+..|+-|++.||.|||+++|.|||||+.||+++.++.+||.|||+|+......
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            9999999999999997654  68999999999999999999999999999999999999999999999999999988877


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIH  242 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~  242 (379)
                      ....+.+|||.|++||++.+.+|. .++|||||||++|||++-+++|.+.+...+..+|.... .+.|...|.+++.+|+
T Consensus       161 ~~a~tvvGTp~YmcPEil~d~pYn-~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~  239 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCPEILSDIPYN-EKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVK  239 (426)
T ss_pred             hhhheecCCCcccCHHHhCCCCCC-ccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHH
Confidence            788899999999999999999885 99999999999999999999999999999999998887 5778889999999999


Q ss_pred             HccCCCCCCCCChHhHhcCcccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .||..+|..||++.++|.+|..+..
T Consensus       240 ~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  240 SMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             HHhhcCCccCCCHHHHhhChhhhhH
Confidence            9999999999999999999987754

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=2.9e-48  Score=370.45  Aligned_cols=258  Identities=28%  Similarity=0.533  Sum_probs=221.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.++..++|+||+++++.+.+.+..|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            47999999999999999999999999999999997654444444566889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-cccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-VELL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-~~~~  166 (379)
                      ||++||+|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ....
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence            99999999999977 467999999999999999999999999999999999999999999999999998654322 1223


Q ss_pred             cccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC---CCCHhH
Q 016991          167 HTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF---WFSTGA  237 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~---~~s~~~  237 (379)
                      ...+||+.|+|||++..    ....+.++|||||||++|+|++|+.||...+....+..+....  ..+|.   .+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~  240 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDA  240 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHH
Confidence            34679999999999863    2334689999999999999999999999888877777776543  23333   479999


Q ss_pred             HHHHHHccCCCCCC--CCChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKT--RIRIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~--R~s~~~il~hp~f~~  266 (379)
                      .+||++||..+|.+  |++++++++||||+.
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         241 KDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             HHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            99999999765544  789999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.7e-48  Score=375.12  Aligned_cols=257  Identities=30%  Similarity=0.482  Sum_probs=216.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||.||+|.+..+|+.||||++....  .......+.+|+.+++.++|+||+++++++...+.+|
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  148 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQ  148 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEE
Confidence            34678999999999999999999999999999999986543  2334567899999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||+++++|.+.    ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus       149 lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        149 VLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             EEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            99999999998642    34678888999999999999999999999999999999999999999999998765543333


Q ss_pred             ccccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHH-HhcccCCCCCCCHhH
Q 016991          166 LHTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKI-NAAEFSCPFWFSTGA  237 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i-~~~~~~~p~~~s~~~  237 (379)
                      ....+||..|+|||++..    ..+.+.++|||||||++|+|++|+.||.....   ......+ .......+..++.++
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  304 (353)
T PLN00034        225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREF  304 (353)
T ss_pred             ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHH
Confidence            455679999999999743    23455789999999999999999999974332   2222222 223344566789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||.+||+.||++|||+.|+++||||....
T Consensus       305 ~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~  335 (353)
T PLN00034        305 RHFISCCLQREPAKRWSAMQLLQHPFILRAQ  335 (353)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence            9999999999999999999999999998753

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.8e-48  Score=376.21  Aligned_cols=256  Identities=25%  Similarity=0.423  Sum_probs=215.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-----KV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-----~~   84 (379)
                      +|++.+.||+|+||.||+|.+..+|+.||||.+.... ......+.+.+|+.+++.++||||+++++++...+     ..
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence            4889999999999999999999999999999986532 22334567889999999999999999999998776     89


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |+|+||+. ++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus        80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence            99999995 6888888888889999999999999999999999999999999999999999999999999987644321 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-------------------
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA-------------------  224 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~-------------------  224 (379)
                      .......+++.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+..                   
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  238 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARA  238 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHH
Confidence            2233456899999999998766556899999999999999999999987765444333321                   


Q ss_pred             ----ccc---------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          225 ----AEF---------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       225 ----~~~---------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                          ...         ..+...++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         239 HILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence                111         1223458899999999999999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.1e-47  Score=359.23  Aligned_cols=254  Identities=36%  Similarity=0.716  Sum_probs=231.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||++.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++......|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            47999999999999999999999999999999997765545555678899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||+++++|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.+||+|||++......   ...
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---~~~  157 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---TYT  157 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---CCC
Confidence            99999999999998889999999999999999999999999999999999999999999999999998765433   345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .+|++.|+|||.+.+... +.++||||||+++|+|++|..||...+.....+.+......+|..+++.+.++|.+||..|
T Consensus       158 ~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  236 (290)
T cd05580         158 LCGTPEYLAPEIILSKGY-GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVD  236 (290)
T ss_pred             CCCCccccChhhhcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccCC
Confidence            578999999999977654 5889999999999999999999988887777777777788888889999999999999999


Q ss_pred             CCCCC-----ChHhHhcCccccc
Q 016991          249 PKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       249 P~~R~-----s~~~il~hp~f~~  266 (379)
                      |.+|+     +++++++||||+.
T Consensus       237 p~~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         237 LTKRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             HHHccCcccCCHHHHHcCccccc
Confidence            99999     9999999999964

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=5.4e-48  Score=368.48  Aligned_cols=258  Identities=29%  Similarity=0.515  Sum_probs=220.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.++..++|+||+++++++.+.+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            47999999999999999999999999999999997654434444566889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-cc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-LL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-~~  166 (379)
                      ||++||+|.+++.. .+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence            99999999999977 46899999999999999999999999999999999999999999999999999875543221 22


Q ss_pred             cccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC---CCCHhH
Q 016991          167 HTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF---WFSTGA  237 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~---~~s~~~  237 (379)
                      ...+||+.|+|||++.+.    +..+.++||||+||++|+|++|+.||...+....+..+....  +.+|.   .+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~  240 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEA  240 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHH
Confidence            345799999999998652    234589999999999999999999999888777777765543  33343   368999


Q ss_pred             HHHHHHccCCCCCC--CCChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKT--RIRIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~--R~s~~~il~hp~f~~  266 (379)
                      .++|.+||..++.+  |++++++++||||+.
T Consensus       241 ~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         241 KDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             HHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            99999999876654  579999999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3e-48  Score=355.87  Aligned_cols=253  Identities=37%  Similarity=0.640  Sum_probs=215.3

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      |++++.||+|+||+||++.+..+++.||+|++......... .....+|+.+++.++||||+++++++......+++|||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence            89999999999999999999999999999999876543332 23445699999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccc
Q 016991           91 VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC  170 (379)
Q Consensus        91 ~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~  170 (379)
                      +.+++|.+++...+.+++..+..++.||+.||.+||+.||+||||||+||+++.++.++|+|||.+.............+
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  159 (260)
T PF00069_consen   80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV  159 (260)
T ss_dssp             ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999889999999999999999999999999999999999999999999999999999875433334455677


Q ss_pred             cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHhcccCCCC----CCCHhHHHHHHH
Q 016991          171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP---TLYKKINAAEFSCPF----WFSTGATSLIHK  243 (379)
Q Consensus       171 gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~---~~~~~i~~~~~~~p~----~~s~~~~~li~~  243 (379)
                      +++.|+|||++......+.++||||||+++++|++|..||...+..   .............+.    ..++++.++|.+
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  239 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKK  239 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHH
Confidence            8999999999973444569999999999999999999999887332   233322222221111    124899999999


Q ss_pred             ccCCCCCCCCChHhHhcCccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f  264 (379)
                      ||+.||++|||+.++++||||
T Consensus       240 ~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  240 MLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HSSSSGGGSTTHHHHHTSGGG
T ss_pred             HccCChhHCcCHHHHhcCCCC
Confidence            999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.9e-47  Score=368.67  Aligned_cols=259  Identities=29%  Similarity=0.469  Sum_probs=211.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT---   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~---   82 (379)
                      ..+++|++.+.||+|+||.||+|.+..+|..||+|++.... ........+.+|+.+++.++||||+++++++....   
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   96 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE   96 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence            45789999999999999999999999999999999986543 23334567889999999999999999999986443   


Q ss_pred             ---eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           83 ---KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        83 ---~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                         ..|+||||+.+ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus        97 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876          97 EFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             ccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence               57999999965 5666553  45889999999999999999999999999999999999999999999999998754


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN----------------  223 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~----------------  223 (379)
                      ... .......||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+.+.......+.                
T Consensus       174 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (359)
T cd07876         174 CTN-FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP  251 (359)
T ss_pred             ccC-ccCCCCcccCCCCCchhccCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence            332 223456789999999999877764 89999999999999999999998765432221110                


Q ss_pred             ------hcccC---------CCC-----------CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          224 ------AAEFS---------CPF-----------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       224 ------~~~~~---------~p~-----------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                            .....         +|.           ..++++++||.+||+.||++|||+.|+++||||+..+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~  324 (359)
T cd07876         252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDP  324 (359)
T ss_pred             HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCc
Confidence                  00000         111           236789999999999999999999999999999875544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-49  Score=364.67  Aligned_cols=261  Identities=31%  Similarity=0.583  Sum_probs=242.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~   83 (379)
                      ..+..+|.++..||+|+||+|.+|..+.+.+.||||+++++-+.....++--..|-++|.... -|.+++++.+|++-+.
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            466789999999999999999999999999999999999987766655666667888888774 6899999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||+.||+|-..|++-+++.|..+..|+.+|+-||-+||++||++||||.+||++|.+|++||+|||++...-.+.
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~  504 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG  504 (683)
T ss_pred             eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998766666


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ....+.||||.|+|||++...+| +..+|+||+||+|||||+|++||++.+..++++.|......+|..+|.++.++++.
T Consensus       505 ~TTkTFCGTPdYiAPEIi~YqPY-gksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg  583 (683)
T KOG0696|consen  505 VTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKG  583 (683)
T ss_pred             cceeeecCCCcccccceEEeccc-ccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHH
Confidence            77789999999999999988877 59999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCh-----HhHhcCccccc
Q 016991          244 ILDPNPKTRIRI-----EGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~-----~~il~hp~f~~  266 (379)
                      +|...|.+|..+     .+|..||||+.
T Consensus       584 ~ltK~P~kRLGcg~~ge~di~~H~FFR~  611 (683)
T KOG0696|consen  584 LLTKHPGKRLGCGPEGERDIREHPFFRR  611 (683)
T ss_pred             HhhcCCccccCCCCccccchhhCcchhh
Confidence            999999999865     68999999975

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.8e-47  Score=359.69  Aligned_cols=259  Identities=25%  Similarity=0.435  Sum_probs=217.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++.+.||+|+||.||+|.+..+++.||+|.+.......  ....+.+|+.+++.++||||+++++++...+..|
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~   80 (301)
T cd07873           3 GKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT   80 (301)
T ss_pred             ccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEE
Confidence            46789999999999999999999999999999999986543222  2345778999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +||||+. ++|.+.+... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++........
T Consensus        81 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          81 LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            9999996 5888887653 5689999999999999999999999999999999999999999999999999875543333


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------  225 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------  225 (379)
                      ......+++.|+|||++.+....+.++|||||||++|+|++|++||...+.......+...                   
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (301)
T cd07873         160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK  239 (301)
T ss_pred             cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccc
Confidence            3345567899999999877655568999999999999999999999887755443332110                   


Q ss_pred             ccCCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          226 EFSCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       226 ~~~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ....|           ..+++.+.+||.+||+.||.+|||++++++||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         240 SYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             ccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            01111           2468889999999999999999999999999999754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.7e-47  Score=357.47  Aligned_cols=252  Identities=30%  Similarity=0.420  Sum_probs=206.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceEEEEEE-----
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVRLHEVLA-----   79 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l---~hp~Iv~l~~~~~-----   79 (379)
                      .+|++.+.||+|+||+||+|++.. +|..||+|++....... .......+|+.+++.+   +||||+++++++.     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence            479999999999999999999864 46889999987543222 2234456777777665   6999999999885     


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      ....+++||||+. ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            3457999999996 5888888653  458999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cC--------
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FS--------  228 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~--------  228 (379)
                      ..... ......+||+.|+|||++.+..+ +.++||||+||++|+|++|.+||.+.+.......+.... ..        
T Consensus       159 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (290)
T cd07862         159 IYSFQ-MALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  236 (290)
T ss_pred             eccCC-cccccccccccccChHHHhCCCC-CCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence            55433 23345679999999999977665 489999999999999999999998877655554443210 00        


Q ss_pred             ------------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 ------------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 ------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                        ..+.+++.+.+||.+||+.||++|||+.++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                              112467888999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2.3e-47  Score=364.41  Aligned_cols=257  Identities=25%  Similarity=0.398  Sum_probs=217.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+..+|..+|+|++....  .....+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence            3578999999999999999999999999999999987542  23345678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||++|++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.....  ..
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~--~~  158 (333)
T cd06650          81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SM  158 (333)
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhh--hc
Confidence            999999999999998888899999999999999999999985 799999999999999999999999999865432  22


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-----------------------
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI-----------------------  222 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i-----------------------  222 (379)
                      ....+|++.|+|||++.+..+ +.++|+||+||++|+|++|+.||...........+                       
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (333)
T cd06650         159 ANSFVGTRSYMSPERLQGTHY-SVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRP  237 (333)
T ss_pred             cccCCCCccccCHHHhcCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccch
Confidence            234579999999999977655 58999999999999999999999765433221111                       


Q ss_pred             ---------------------Hh-cccCCC-CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          223 ---------------------NA-AEFSCP-FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       223 ---------------------~~-~~~~~p-~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                           .. .....+ ..++.++.+||.+||+.||++|||+.+++.||||+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                                 00 001111 13678899999999999999999999999999998543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.8e-47  Score=368.17  Aligned_cols=260  Identities=28%  Similarity=0.439  Sum_probs=212.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR----   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~----   81 (379)
                      ...++|++.+.||+|+||.||.|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++...    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~   99 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE   99 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence            356899999999999999999999999999999999875432 233446788999999999999999999987543    


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                        ...|+||||+.+ +|.+.+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       100 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875         100 EFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             ccCeEEEEEeCCCC-CHHHHHH--hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence              468999999965 6777664  35889999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--------------  225 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--------------  225 (379)
                      ... .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.......+...              
T Consensus       177 ~~~-~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (364)
T cd07875         177 GTS-FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP  254 (364)
T ss_pred             CCC-CcccCCcccCCcCCHHHHhCCCC-CchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence            432 22345678999999999987766 48999999999999999999999887655444333210              


Q ss_pred             --------ccC--------------C------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCC
Q 016991          226 --------EFS--------------C------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       226 --------~~~--------------~------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                              ...              .      +...+.++++||.+||+.||.+|||++++++||||...+.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~  328 (364)
T cd07875         255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS  328 (364)
T ss_pred             HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcc
Confidence                    000              0      011356789999999999999999999999999998655443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.2e-47  Score=382.10  Aligned_cols=259  Identities=29%  Similarity=0.464  Sum_probs=224.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      ..++|++.+.||+|+||+||+|.+..+|+.||||++...... ......+.+|+.++..++|+||+++++.+...+    
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            347999999999999999999999999999999999765443 334567889999999999999999988775332    


Q ss_pred             ----eEEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeec
Q 016991           83 ----KVYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFG  154 (379)
Q Consensus        83 ----~~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfG  154 (379)
                          .+++||||+++|+|.+++...    ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence                478999999999999988643    468999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCC--cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCC
Q 016991          155 LSALPQQG--VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPF  231 (379)
Q Consensus       155 l~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~  231 (379)
                      ++......  .....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.......+....+ ..|.
T Consensus       189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~-s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  267 (496)
T PTZ00283        189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPY-SKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPP  267 (496)
T ss_pred             cCeeccccccccccccccCCcceeCHHHhCCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence            98764431  223456789999999999987666 4899999999999999999999998887777776665543 4677


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+++++.+++.+||+.||.+||++.++++|||++..
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence            899999999999999999999999999999998753

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=2.6e-47  Score=356.12  Aligned_cols=255  Identities=29%  Similarity=0.490  Sum_probs=216.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|++|+.+++.+...+..|+|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            48889999999999999999999999999999876554444445667889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |++|++|.+++...+  .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...... ....
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~~~~  159 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-QTIK  159 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-cccc
Confidence            999999998886543  5899999999999999999999999999999999999999999999999998654332 2223


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP----TLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ..+|++.|+|||++.+..+ +.++||||+||++|+|++|++||......    .............+..+++++.+|+.+
T Consensus       160 ~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (285)
T cd05630         160 GRVGTVGYMAPEVVKNERY-TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKM  238 (285)
T ss_pred             CCCCCccccChHHHcCCCC-CCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHH
Confidence            4579999999999987665 48999999999999999999999765421    111112222334566789999999999


Q ss_pred             ccCCCCCCCCC-----hHhHhcCccccc
Q 016991          244 ILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ||+.||.+|||     ++++++||||+.
T Consensus       239 ~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         239 LLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            99999999999     899999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.4e-47  Score=379.18  Aligned_cols=256  Identities=27%  Similarity=0.458  Sum_probs=223.0

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC-CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~-~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ....|.+.+.||+|+||.||.|.+..+ +..||+|.+...   .......+.+|+.+|+.++||||+++++++...+..|
T Consensus        65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         65 REHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             cceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEE
Confidence            345599999999999999999999887 788999976443   2334456788999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           86 IILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +||||++||+|.+++..    ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            99999999999987753    34689999999999999999999999999999999999999999999999999876543


Q ss_pred             Cc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHH
Q 016991          162 GV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGAT  238 (379)
Q Consensus       162 ~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~  238 (379)
                      ..  ....+.+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+.......+..... ..|..+++++.
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  300 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWERKRY-SKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMK  300 (478)
T ss_pred             ccccccccccCCCccccCHhHhCCCCC-CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHH
Confidence            21  22446689999999999977665 5899999999999999999999998887777777665554 35667899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++|.+||+.||++||++++++.|||++.
T Consensus       301 ~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        301 ALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            9999999999999999999999999864

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-47  Score=348.74  Aligned_cols=255  Identities=29%  Similarity=0.499  Sum_probs=220.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +.|++.+.||+|++|.||.|.+..+++.||+|.+.......  ....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            46999999999999999999999999999999987543221  2234678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--  164 (379)
                      ++||++|++|.+.+...+.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++........  
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            999999999999998888899999999999999999999999999999999999999999999999999865433111  


Q ss_pred             -cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHHHH
Q 016991          165 -LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li  241 (379)
                       ......|+..|+|||++.+..+ +.++||||+|+++|+|++|+.||...+.......+...  ....|..++..+.++|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  240 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGY-GRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFL  240 (263)
T ss_pred             ccccCCCcCccccCcceeccCCC-CchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHH
Confidence             1134568899999999987664 58999999999999999999999876655444443332  3456777899999999


Q ss_pred             HHccCCCCCCCCChHhHhcCccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .+||..+|.+|||+.++++||||
T Consensus       241 ~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         241 RRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHhhcCcccCCCHHHHhhCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.2e-47  Score=380.61  Aligned_cols=253  Identities=24%  Similarity=0.380  Sum_probs=204.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC------CCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH------PNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h------p~Iv~l~~~~~~~   81 (379)
                      .++|++.+.||+|+||+||+|.+..+++.||||+++...    ........|+.+++.++|      ++++++++++...
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence            468999999999999999999999999999999986432    123445667777777654      4588899988754


Q ss_pred             -CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCC-------------
Q 016991           82 -TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYG-------------  146 (379)
Q Consensus        82 -~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~-------------  146 (379)
                       ..+|+|||++ |++|.+++.+.+.+++..++.++.||+.||.|||+ .||+||||||+|||++.++             
T Consensus       204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~  282 (467)
T PTZ00284        204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP  282 (467)
T ss_pred             CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence             5789999988 88999999888899999999999999999999998 5999999999999998765             


Q ss_pred             ---CeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 016991          147 ---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN  223 (379)
Q Consensus       147 ---~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~  223 (379)
                         .+||+|||++.....   .....+||+.|+|||++.+..|. .++|||||||++|+|++|++||.+.+.......+.
T Consensus       283 ~~~~vkl~DfG~~~~~~~---~~~~~~gt~~Y~APE~~~~~~~~-~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~  358 (467)
T PTZ00284        283 DPCRVRICDLGGCCDERH---SRTAIVSTRHYRSPEVVLGLGWM-YSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLME  358 (467)
T ss_pred             CCceEEECCCCccccCcc---ccccccCCccccCcHHhhcCCCC-cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence               499999998754322   23456899999999999887764 89999999999999999999998766543322221


Q ss_pred             hcccCCC------------------------------------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          224 AAEFSCP------------------------------------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       224 ~~~~~~p------------------------------------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...-.+|                                          ...++.+.|||.+||+.||.+|||++|+|+|
T Consensus       359 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H  438 (467)
T PTZ00284        359 KTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH  438 (467)
T ss_pred             HHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence            1100000                                          0014567799999999999999999999999


Q ss_pred             ccccccCC
Q 016991          262 PWFRKNYN  269 (379)
Q Consensus       262 p~f~~~~~  269 (379)
                      |||+..+.
T Consensus       439 p~~~~~~~  446 (467)
T PTZ00284        439 PYVLKYYP  446 (467)
T ss_pred             ccccccCC
Confidence            99987543

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=4.5e-47  Score=353.01  Aligned_cols=248  Identities=29%  Similarity=0.474  Sum_probs=208.2

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||+|+||.||++.+..+|+.||+|.+.+...........+..|+.+++.++||||+++++.+......|+||||++|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            79999999999999999999999999765443333334566799999999999999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCC
Q 016991           97 FDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN  174 (379)
Q Consensus        97 ~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~  174 (379)
                      .+.+....  .+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...... .......|++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~  159 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQRAGTNG  159 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeeccCCCCC
Confidence            98886543  5888999999999999999999999999999999999999999999999998765432 22234578999


Q ss_pred             CCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcccCCC-CCCCHhHHHHHHHccCCCC
Q 016991          175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYKKINAAEFSCP-FWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       175 y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP  249 (379)
                      |+|||++.+..+ +.++||||+||++|+|++|..||.....    ......+.......+ ..+++++.+||++||+.||
T Consensus       160 y~aPE~~~~~~~-~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P  238 (277)
T cd05607         160 YMAPEILKEEPY-SYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKP  238 (277)
T ss_pred             ccCHHHHccCCC-CCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCH
Confidence            999999987765 5899999999999999999999976432    223333333333322 3579999999999999999


Q ss_pred             CCCCCh----HhHhcCccccc
Q 016991          250 KTRIRI----EGIRKHPWFRK  266 (379)
Q Consensus       250 ~~R~s~----~~il~hp~f~~  266 (379)
                      .+||++    ++++.||||+.
T Consensus       239 ~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         239 EDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             hhCCCCccchhhhhcChhhcC
Confidence            999999    67889999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=4e-47  Score=365.75  Aligned_cols=259  Identities=28%  Similarity=0.454  Sum_probs=211.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR----   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~----   81 (379)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++..... .......+.+|+.+++.++||||+++++++...    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   92 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLE   92 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccc
Confidence            457899999999999999999999999999999999875432 233456788899999999999999999988643    


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                        ...|+||||+++ +|.+.+.  ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        93 ~~~~~~lv~e~~~~-~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874          93 EFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             ccceeEEEhhhhcc-cHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence              357999999965 5666664  35889999999999999999999999999999999999999999999999998754


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--------------  225 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--------------  225 (379)
                      ... ......+||+.|+|||++.+..+. .++|||||||++|+|++|+.||.+.+.......+...              
T Consensus       170 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (355)
T cd07874         170 GTS-FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  247 (355)
T ss_pred             CCc-cccCCccccCCccCHHHHcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence            432 223456799999999999877664 8999999999999999999999877644332221100              


Q ss_pred             --------c-----cC---------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          226 --------E-----FS---------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       226 --------~-----~~---------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                              .     ..               .+...+.++.+||.+||+.||++|||+.|+++||||+..+.+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~  320 (355)
T cd07874         248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP  320 (355)
T ss_pred             HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence                    0     00               111235678999999999999999999999999999866543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-48  Score=348.98  Aligned_cols=254  Identities=30%  Similarity=0.572  Sum_probs=223.3

Q ss_pred             eee-eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 016991           11 YEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        11 y~~-~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      |++ .+.||+|+|+.|--+.+..+|..||||++++..   .....++.+|++++...+ |+||++++++|++++..|+||
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf  155 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF  155 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence            444 367999999999999999999999999998863   334578999999999886 999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccCCC-----
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQ-----  160 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~~~-----  160 (379)
                      |-+.||.|..+|.++.-++|.++.++.++|+.||.+||.+||+||||||||||-....   -+|||||.+..-..     
T Consensus       156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~  235 (463)
T KOG0607|consen  156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC  235 (463)
T ss_pred             ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence            9999999999999999999999999999999999999999999999999999997655   48999999864322     


Q ss_pred             --CCcccccccccCCCCCchhhhc----cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---------------hHHHH
Q 016991          161 --QGVELLHTTCGTPNYVAPEVLS----NRGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLY  219 (379)
Q Consensus       161 --~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---------------~~~~~  219 (379)
                        .....+.+.||+..|||||+..    ...++..++|.||||||||-||+|++||.+.-               ...++
T Consensus       236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF  315 (463)
T KOG0607|consen  236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF  315 (463)
T ss_pred             CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence              1334567889999999999973    23455689999999999999999999996521               24678


Q ss_pred             HHHHhcccCCCCC----CCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          220 KKINAAEFSCPFW----FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       220 ~~i~~~~~~~p~~----~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ..|+.+.|.+|..    +|.+++|||+.+|..|+.+|.++.+.++|||++..
T Consensus       316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~  367 (463)
T KOG0607|consen  316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC  367 (463)
T ss_pred             HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence            8899999999963    89999999999999999999999999999999864

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=9.4e-48  Score=373.58  Aligned_cols=253  Identities=31%  Similarity=0.458  Sum_probs=216.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-C-----CCcceEEEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-H-----PNIVRLHEVLA   79 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-h-----p~Iv~l~~~~~   79 (379)
                      ..-.+|++.+.||+|+||.|.+|.+..|++.||||++++..    ....+...|+.+|..|+ |     -|+|+++++|.
T Consensus       183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~  258 (586)
T KOG0667|consen  183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFY  258 (586)
T ss_pred             eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccc
Confidence            34458999999999999999999999999999999997643    35577888999999997 4     49999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC--CeEEeeecc
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG--NLKVSDFGL  155 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~--~lkl~DfGl  155 (379)
                      ..++.|||+|.+ +.+|.+++..+.  +++...++.+++||+.||.+||+.||||+|||||||||.+.+  .+||+|||.
T Consensus       259 fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGS  337 (586)
T KOG0667|consen  259 FRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGS  337 (586)
T ss_pred             cccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccc
Confidence            999999999998 679999998764  688999999999999999999999999999999999997544  799999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----------
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA----------  225 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~----------  225 (379)
                      |......   ..+++-+..|+|||++.+.+|+ .+.||||||||++||++|.+.|++.+...+...|...          
T Consensus       338 Sc~~~q~---vytYiQSRfYRAPEVILGlpY~-~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~  413 (586)
T KOG0667|consen  338 SCFESQR---VYTYIQSRFYRAPEVILGLPYD-TAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLD  413 (586)
T ss_pred             ccccCCc---ceeeeeccccccchhhccCCCC-CccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            9876543   3488999999999999999986 9999999999999999999999998866555444110          


Q ss_pred             ------------------------------------------ccCCCCC-----------CCHhHHHHHHHccCCCCCCC
Q 016991          226 ------------------------------------------EFSCPFW-----------FSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       226 ------------------------------------------~~~~p~~-----------~s~~~~~li~~~L~~dP~~R  252 (379)
                                                                ....|..           -...+.|||++||+.||.+|
T Consensus       414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R  493 (586)
T KOG0667|consen  414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER  493 (586)
T ss_pred             hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence                                                      0011200           12346899999999999999


Q ss_pred             CChHhHhcCcccccc
Q 016991          253 IRIEGIRKHPWFRKN  267 (379)
Q Consensus       253 ~s~~~il~hp~f~~~  267 (379)
                      +|+.++++||||...
T Consensus       494 ~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  494 ITPAQALNHPFLTGT  508 (586)
T ss_pred             CCHHHHhcCcccccc
Confidence            999999999999843

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.6e-47  Score=365.33  Aligned_cols=258  Identities=25%  Similarity=0.399  Sum_probs=212.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR----   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~----   81 (379)
                      ...++|++.+.||.|+||.||+|.+..++..||||++.+... .....+.+.+|+.+++.++||||+++++++...    
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE   90 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence            345799999999999999999999999999999999875432 222345677899999999999999999987533    


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                        ...|+++|++ |++|.+++. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        91 ~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          91 NFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             ccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence              4579999998 788877664 467999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-------------  226 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------  226 (379)
                      ..   .....+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+....             
T Consensus       169 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd07878         169 DD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS  245 (343)
T ss_pred             CC---CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence            43   23456799999999999875556789999999999999999999998766543333321100             


Q ss_pred             ----------cCCC--------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          227 ----------FSCP--------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       227 ----------~~~p--------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                ...|        ...++.+.+||.+||+.||.+|||+.++++||||.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~  306 (343)
T cd07878         246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHD  306 (343)
T ss_pred             hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCC
Confidence                      0011        135677899999999999999999999999999986543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.6e-46  Score=344.25  Aligned_cols=253  Identities=28%  Similarity=0.526  Sum_probs=219.0

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-RTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~~~~~lv~   88 (379)
                      +|++.+.||+|++|.||.+.+..+++.||+|.+...... ....+.+.+|+.+++.++|||++++++.+.. ....|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence            599999999999999999999999999999998764432 2344678899999999999999999998764 45689999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           89 EFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||+++++|.+++...  ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++..........
T Consensus        80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~  159 (257)
T cd08223          80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA  159 (257)
T ss_pred             cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc
Confidence            999999999998763  458999999999999999999999999999999999999999999999999987654433344


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHcc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L  245 (379)
                      ....|++.|+|||++.+..+ +.++|+||+||++++|++|+.||...+.......+..... ..|..+++++.++|.+||
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  238 (257)
T cd08223         160 STLIGTPYYMSPELFSNKPY-NYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATML  238 (257)
T ss_pred             ccccCCcCccChhHhcCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHh
Confidence            55678999999999977665 4899999999999999999999988776665555544433 456678999999999999


Q ss_pred             CCCCCCCCChHhHhcCccc
Q 016991          246 DPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f  264 (379)
                      ++||.+|||+.++++||||
T Consensus       239 ~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         239 SKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=4.4e-47  Score=354.22  Aligned_cols=251  Identities=30%  Similarity=0.424  Sum_probs=204.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceEEEEEEe-----C
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVRLHEVLAS-----R   81 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l---~hp~Iv~l~~~~~~-----~   81 (379)
                      +|++.+.||+|+||+||+|.+..+|+.||+|.+....... .....+.+|+.+++.+   +||||+++++++..     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            6999999999999999999999999999999987543222 1223456677777665   69999999998864     3


Q ss_pred             CeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ..++++|||+.+ +|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence            568999999974 888888654  35899999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-----------c-
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-----------F-  227 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-----------~-  227 (379)
                      ... .......|++.|+|||++.+..+ +.++||||+||++|+|++|.+||.+.+......++....           . 
T Consensus       159 ~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07863         159 SCQ-MALTPVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT  236 (288)
T ss_pred             cCc-ccCCCccccccccCchHhhCCCC-CCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence            432 22334568999999999977665 589999999999999999999998776554443332110           0 


Q ss_pred             ---------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          228 ---------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       228 ---------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                     .+.+.++..+.+||.+||++||.+|||+.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                           0112367788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-48  Score=362.49  Aligned_cols=261  Identities=31%  Similarity=0.504  Sum_probs=236.4

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      +....+.|+..++||+|+||.|+-++.+.||+-||+|.+++..+..........+|-.+|.+++.+.||.+-..|++.+.
T Consensus       180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~  259 (591)
T KOG0986|consen  180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA  259 (591)
T ss_pred             hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence            45667789999999999999999999999999999999998877666656678899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +++|+..|+||+|.-+|.+.+  .++|..++.|+.+|+.||++||+++|++|||||+|||+|+.|+++|+|+|+|.....
T Consensus       260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~  339 (591)
T KOG0986|consen  260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE  339 (591)
T ss_pred             eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence            999999999999999998877  899999999999999999999999999999999999999999999999999987665


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcccCCCCCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~~p~~~s~~~  237 (379)
                      + ......+||.+|||||++.+..|+ ...|+|||||+||+|+.|+.||....    ..++.+.+......+|..+|+++
T Consensus       340 g-~~~~~rvGT~GYMAPEvl~ne~Y~-~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~ea  417 (591)
T KOG0986|consen  340 G-KPIRGRVGTVGYMAPEVLQNEVYD-FSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEA  417 (591)
T ss_pred             C-CccccccCcccccCHHHHcCCccc-CCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHH
Confidence            4 334456999999999999988864 99999999999999999999996543    34667777888888899999999


Q ss_pred             HHHHHHccCCCCCCCCC-----hHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      +++.+.+|..||++|..     ++++.+||||+.
T Consensus       418 kslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~  451 (591)
T KOG0986|consen  418 KSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKD  451 (591)
T ss_pred             HHHHHHHHccCHHHhccCCCcCcchhhhCccccc
Confidence            99999999999999985     568999999986

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.2e-46  Score=351.48  Aligned_cols=256  Identities=29%  Similarity=0.492  Sum_probs=219.7

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|+..+.||+|+||+||.|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++.+..++..+++||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            47888999999999999999999999999999977554444444567889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+++++|.+.+...  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...... ....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~  159 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-ESIR  159 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-Cccc
Confidence            99999998888653  36999999999999999999999999999999999999999999999999988654332 2224


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL----YKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~----~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ...|++.|+|||++.+..+ +.++|+||+||++|+|++|..||.+......    ...+.......+..+++++.+|+.+
T Consensus       160 ~~~g~~~~~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (285)
T cd05632         160 GRVGTVGYMAPEVLNNQRY-TLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKM  238 (285)
T ss_pred             CCCCCcCccChHHhcCCCC-CcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHH
Confidence            5579999999999977665 4899999999999999999999987654332    2333444445666789999999999


Q ss_pred             ccCCCCCCCCC-----hHhHhcCcccccc
Q 016991          244 ILDPNPKTRIR-----IEGIRKHPWFRKN  267 (379)
Q Consensus       244 ~L~~dP~~R~s-----~~~il~hp~f~~~  267 (379)
                      ||+.||.+||+     +.+++.||||+..
T Consensus       239 ~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         239 LLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            99999999999     8899999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.2e-46  Score=348.77  Aligned_cols=253  Identities=31%  Similarity=0.466  Sum_probs=210.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|++|.||+|.+..+|..||||++..... .....+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE   79 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence            58999999999999999999999999999999865432 22234678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           90 FVTGGELFDKIVHQ---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        90 ~~~gg~L~~~l~~~---~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |++ ++|.+++...   ..+++..++.++.||+.||.|||++|++||||||+||+++.+|.++|+|||++..........
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  158 (285)
T cd07861          80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY  158 (285)
T ss_pred             cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence            997 5788877542   468999999999999999999999999999999999999999999999999987554333333


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc------------------cc-
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA------------------EF-  227 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~------------------~~-  227 (379)
                      ....+++.|+|||++.+....+.++|||||||++|+|++|++||.+.+.......+...                  .. 
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence            44567899999999876555568999999999999999999999876543221111000                  00 


Q ss_pred             ----------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          228 ----------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       228 ----------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                .....+++++.++|.+||+.||.+|||+.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                      0122368999999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.1e-46  Score=356.77  Aligned_cols=245  Identities=27%  Similarity=0.439  Sum_probs=194.4

Q ss_pred             eeeecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEEEEe
Q 016991           14 GRTIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RTKVYIILE   89 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~~~~lv~E   89 (379)
                      +++||+|+||+||+|.+.  .++..||+|.+.....     ...+.+|+.+++.++||||+++++++..  ...+|++||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence            578999999999999976  4678999998865321     2456789999999999999999998854  567899999


Q ss_pred             ccCCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE----ccCCCeEEeeeccc
Q 016991           90 FVTGGELFDKIVHQ---------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLS  156 (379)
Q Consensus        90 ~~~gg~L~~~l~~~---------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll----~~~~~lkl~DfGl~  156 (379)
                      |+. ++|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            984 5788777532         258999999999999999999999999999999999999    45678999999999


Q ss_pred             cCCCCCc---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------HHHHHHHh
Q 016991          157 ALPQQGV---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP---------TLYKKINA  224 (379)
Q Consensus       157 ~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~---------~~~~~i~~  224 (379)
                      .......   ......+||+.|+|||++.+...++.++||||+||++|+|++|++||......         .....+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN  239 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence            7654321   22345678999999999987665678999999999999999999999643310         11111100


Q ss_pred             ----------------------------cccC----------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          225 ----------------------------AEFS----------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       225 ----------------------------~~~~----------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                                  ....          .....+.++.+||.+||+.||.+|||++|+++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         240 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             hcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                                        0000          001135678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=3.6e-46  Score=344.13  Aligned_cols=254  Identities=28%  Similarity=0.497  Sum_probs=219.3

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc------hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK------HRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~------~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      +|.+++.||.|++|.||.|.+..++..||+|.+.......      ....+.+.+|+.+++.++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            5889999999999999999999999999999887543321      2344678999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      .++++||+++++|.+++...+.+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999987654211


Q ss_pred             ------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-ccCCCCCCCHh
Q 016991          164 ------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-EFSCPFWFSTG  236 (379)
Q Consensus       164 ------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~  236 (379)
                            .......|+..|+|||.+.+..+ +.++|+||+||++|+|++|+.||.+.+.......+... ....|..++..
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTSY-TRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSE  239 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCCC-CchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHH
Confidence                  11123468899999999977665 48899999999999999999999876654444443332 34566778999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +.++|.+||++||.+||++.++++||||
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         240 AIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=4.2e-46  Score=351.78  Aligned_cols=254  Identities=27%  Similarity=0.440  Sum_probs=215.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||++.+..+|..+|+|.+....  ......++.+|+++++.++||||+++++.+..++..|+||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   78 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM   78 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence            47999999999999999999999999999999986532  2334567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||++|++|.+++...+.+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.....  ....
T Consensus        79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--~~~~  156 (308)
T cd06615          79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--SMAN  156 (308)
T ss_pred             eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc--cccc
Confidence            999999999999888899999999999999999999997 5999999999999999999999999998865433  2234


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----------------------
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA----------------------  225 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~----------------------  225 (379)
                      ..+|++.|+|||++.+..+ +.++|+||+||++|+|++|..||...+.......+...                      
T Consensus       157 ~~~~~~~~~aPE~~~~~~~-~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (308)
T cd06615         157 SFVGTRSYMSPERLQGTHY-TVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPR  235 (308)
T ss_pred             cCCCCcCccChhHhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccc
Confidence            5678999999999876554 58999999999999999999999765543332222111                      


Q ss_pred             ---------------ccCCCC-CCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          226 ---------------EFSCPF-WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       226 ---------------~~~~p~-~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                     ....|. .+++++.+|+.+||..||++|||+.++++||||...
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         236 PMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             hhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                           011111 267889999999999999999999999999999753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6.6e-47  Score=352.33  Aligned_cols=253  Identities=33%  Similarity=0.496  Sum_probs=210.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+....|+++|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE   79 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence            69999999999999999999999999999999875432 22233567789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           90 FVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        90 ~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |+. ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++............
T Consensus        80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (284)
T cd07839          80 YCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA  158 (284)
T ss_pred             cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence            996 578777754 567999999999999999999999999999999999999999999999999998765443333345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHhc----------------cc----
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA----------------EF----  227 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf-~~~~~~~~~~~i~~~----------------~~----  227 (379)
                      ..+++.|+|||++.+....+.++||||+||++|+|++|..|| .+.+.....+.+...                .+    
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence            567899999999877665568999999999999999988875 444443333332110                00    


Q ss_pred             ---------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          228 ---------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       228 ---------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                               .....+++++.+||.+||+.||.+|||++++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                     0112368899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-46  Score=352.70  Aligned_cols=257  Identities=32%  Similarity=0.541  Sum_probs=225.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|++.+.||+|+||.||+|.+..+++.||||.+.+.........+.+.+|+.+++.++||||+++++.+......|++|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            37999999999999999999999999999999998765554445678999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--
Q 016991           89 EFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--  164 (379)
Q Consensus        89 E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--  164 (379)
                      ||+.|++|.+++...  ..+++..++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........  
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            999999999998754  5789999999999999999999999999999999999999999999999998764432110  


Q ss_pred             ---------------------------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 016991          165 ---------------------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT  217 (379)
Q Consensus       165 ---------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~  217 (379)
                                                 ......|+..|+|||++.+..+ +.++||||||+++|+|++|..||.+.+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDE  239 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCC-CchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence                                       1123468889999999987665 589999999999999999999998888777


Q ss_pred             HHHHHHhcccCCCCC--CCHhHHHHHHHccCCCCCCCCC----hHhHhcCccccc
Q 016991          218 LYKKINAAEFSCPFW--FSTGATSLIHKILDPNPKTRIR----IEGIRKHPWFRK  266 (379)
Q Consensus       218 ~~~~i~~~~~~~p~~--~s~~~~~li~~~L~~dP~~R~s----~~~il~hp~f~~  266 (379)
                      .+..+......+|..  ++.++.++|.+||..||.+|||    +++++.||||+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~  294 (316)
T cd05574         240 TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG  294 (316)
T ss_pred             HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence            666666655555554  6999999999999999999999    999999999975

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=6.8e-46  Score=339.74  Aligned_cols=253  Identities=28%  Similarity=0.492  Sum_probs=222.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|++|.||+|.+..+|..|++|.+...... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence            588999999999999999999999999999998764433 3345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |++|++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++...........
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~  159 (256)
T cd08529          80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFAN  159 (256)
T ss_pred             eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhh
Confidence            99999999999764  5789999999999999999999999999999999999999999999999999876554333334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~  246 (379)
                      ..+|++.|+|||++.+..+ +.++|+|||||++++|++|+.||...+.......+..... ..+..++.++.++|.+||+
T Consensus       160 ~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd08529         160 TIVGTPYYLSPELCEDKPY-NEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLT  238 (256)
T ss_pred             ccccCccccCHHHhcCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcc
Confidence            5678999999999987665 4899999999999999999999988887666666655543 3444688999999999999


Q ss_pred             CCCCCCCChHhHhcCccc
Q 016991          247 PNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f  264 (379)
                      .+|++||++.++++|||+
T Consensus       239 ~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         239 KDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             CCcccCcCHHHHhhCCCC
Confidence            999999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-46  Score=348.42  Aligned_cols=257  Identities=32%  Similarity=0.471  Sum_probs=221.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|++.+.||.|+||.||++.+..++..+|+|++...   .....+.+.+|+.+++.++||||+++++.+..+...|+|
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL   80 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence            46799999999999999999999989999999998643   333456788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++..........
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR  160 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence            9999999999988764 579999999999999999999999999999999999999999999999999876544333333


Q ss_pred             cccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHH
Q 016991          167 HTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATS  239 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~  239 (379)
                      ....|++.|+|||++...    ...+.++|+||+||++|+|++|++||...+.......+....   +..|..++.++.+
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
T cd06611         161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFND  240 (280)
T ss_pred             ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHH
Confidence            455789999999998532    223478999999999999999999998877666555555443   2345678999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +|.+||+.||.+||++.++++||||...
T Consensus       241 li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         241 FLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHHhccChhhCcCHHHHhcChhhccc
Confidence            9999999999999999999999999753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=5e-46  Score=346.37  Aligned_cols=255  Identities=30%  Similarity=0.454  Sum_probs=213.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++......|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   79 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF   79 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence            4799999999999999999999999999999998654321 123356789999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++++.|..++.....+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++............
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (286)
T cd07847          80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD  159 (286)
T ss_pred             eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccC
Confidence            99999888887777678999999999999999999999999999999999999999999999999998765543323334


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------c----cCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------------E----FSC  229 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------------~----~~~  229 (379)
                      ..++..|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+...               .    ...
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07847         160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSI  239 (286)
T ss_pred             cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccC
Confidence            567889999999876555568999999999999999999999876543322222110               0    000


Q ss_pred             C------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          230 P------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       230 p------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      |            ..++..+.+||.+||++||++|||+.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         240 PEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            1            1357889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.8e-46  Score=344.59  Aligned_cols=253  Identities=31%  Similarity=0.587  Sum_probs=224.7

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|+||.||+|.+..++..||+|++.+.........+.+.+|+.+++.++||||+++++.+......|+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            58999999999999999999999999999999987665554567889999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      |+.|++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... .....
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~  159 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-LTTST  159 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-ccccc
Confidence            99999999999887799999999999999999999999999999999999999999999999999987654331 23456


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcccCCCCCCCHhHHHHHHHccC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  246 (379)
                      .|+..|+|||++.+..+ +.++|+||+|+++|+|++|..||...+.   ..............|..+++++.++|.+||.
T Consensus       160 ~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (258)
T cd05578         160 SGTPGYMAPEVLCRQGY-SVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLLE  238 (258)
T ss_pred             CCChhhcCHHHHcccCC-CCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHcc
Confidence            68889999999977664 5899999999999999999999987763   3444444435566777889999999999999


Q ss_pred             CCCCCCCCh--HhHhcCccc
Q 016991          247 PNPKTRIRI--EGIRKHPWF  264 (379)
Q Consensus       247 ~dP~~R~s~--~~il~hp~f  264 (379)
                      .||.+||++  .++++||||
T Consensus       239 ~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         239 RDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             CChhHcCCccHHHHhcCCCC
Confidence            999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-48  Score=372.94  Aligned_cols=255  Identities=30%  Similarity=0.471  Sum_probs=227.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      -+-|+|+..||.|+||+||+|.+++++-..|.|+|.-.   ..+..+.+.-||.||....||+||++++.|...+.+++.
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwil  107 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWIL  107 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEE
Confidence            34689999999999999999999999988899988543   455678899999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      .|||.||-....+.. ...+++++++-+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+.........-
T Consensus       108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkR  187 (1187)
T KOG0579|consen  108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKR  187 (1187)
T ss_pred             EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhh
Confidence            999999998777655 4579999999999999999999999999999999999999999999999999987655444445


Q ss_pred             cccccCCCCCchhhhc-----cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC---CCCCCCHhHH
Q 016991          167 HTTCGTPNYVAPEVLS-----NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS---CPFWFSTGAT  238 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~-----~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~---~p~~~s~~~~  238 (379)
                      .+.+|||+|||||+..     ..+|+ +++||||||++|.+|..+.+|....+.+.+.-+|...+++   -|..+|..+.
T Consensus       188 DsFIGTPYWMAPEVvmCET~KD~PYD-ykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~  266 (1187)
T KOG0579|consen  188 DSFIGTPYWMAPEVVMCETFKDQPYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFS  266 (1187)
T ss_pred             ccccCCcccccchheeeccccCCCch-hhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHH
Confidence            6789999999999974     34565 8999999999999999999999999998888888776643   5777899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||+.+||..||..||++++|++||||+.
T Consensus       267 DfLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  267 DFLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             HHHHHHHhcCCccCCCHHHHhhCccccc
Confidence            9999999999999999999999999985

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.3e-46  Score=344.56  Aligned_cols=254  Identities=30%  Similarity=0.447  Sum_probs=214.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||.|.+..++..||+|++....   ......+.+|+.+++.++||||+++++.+...+..|+
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence            3468999999999999999999999999999999986543   2233567889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      +|||+++++|.+++...+.+++.++..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKR  163 (267)
T ss_pred             EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccc
Confidence            99999999999999888899999999999999999999999999999999999999999999999999986554333333


Q ss_pred             cccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC-----CCCCHhHHH
Q 016991          167 HTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP-----FWFSTGATS  239 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p-----~~~s~~~~~  239 (379)
                      ....|++.|+|||++..  ....+.++|+||+||++|+|++|..||...................+     ..++..+.+
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (267)
T cd06645         164 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHH  243 (267)
T ss_pred             ccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHH
Confidence            45679999999999842  22235899999999999999999999966544333222222222222     236788999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                      +|.+||..||.+|||++++++|||
T Consensus       244 li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         244 FVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHHccCCchhCcCHHHHhcCCC
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=8.1e-46  Score=346.82  Aligned_cols=262  Identities=29%  Similarity=0.452  Sum_probs=220.7

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      .+.-..-+.|++++.||.|+||.||+|.+..++..||+|++...   .....+.+.+|+.+++.++||||+++++.+..+
T Consensus         5 ~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   81 (292)
T cd06644           5 RRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD   81 (292)
T ss_pred             hcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC
Confidence            34444557899999999999999999999999999999998653   233457788999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +..|+||||++|++|..++.+ ...+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++....
T Consensus        82 ~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  161 (292)
T cd06644          82 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV  161 (292)
T ss_pred             CeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence            999999999999999887754 4578999999999999999999999999999999999999999999999999876543


Q ss_pred             CCcccccccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCC
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWF  233 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~  233 (379)
                      ..........+++.|+|||++...    ...+.++|+|||||++|+|++|.+||...+......++....   ...|..+
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (292)
T cd06644         162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKW  241 (292)
T ss_pred             ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCccc
Confidence            322223455688999999998532    222478999999999999999999998776655555544332   2335567


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +.++.++|.+||..||++||+++++++||||..
T Consensus       242 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~  274 (292)
T cd06644         242 SMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS  274 (292)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            899999999999999999999999999999964

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1e-45  Score=348.49  Aligned_cols=257  Identities=30%  Similarity=0.579  Sum_probs=222.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+.+.........+.+.+|+.+++.++||||+++++.+..++..|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            46999999999999999999999999999999987765434445567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC------
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG------  162 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~------  162 (379)
                      ||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......      
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            99999999999988888999999999999999999999999999999999999999999999999987632110      


Q ss_pred             ---------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC--
Q 016991          163 ---------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF--  231 (379)
Q Consensus       163 ---------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~--  231 (379)
                               ........|+..|+|||.+.+..+ +.++|+|||||++|+|++|..||.+.+.......+.......|.  
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  239 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD  239 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcc
Confidence                     001112457889999999877665 58999999999999999999999888777777776655443332  


Q ss_pred             -CCCHhHHHHHHHccCCCCCCCCC---hHhHhcCccccc
Q 016991          232 -WFSTGATSLIHKILDPNPKTRIR---IEGIRKHPWFRK  266 (379)
Q Consensus       232 -~~s~~~~~li~~~L~~dP~~R~s---~~~il~hp~f~~  266 (379)
                       .+++++.++|.+||+.||.+||+   +.++++||||..
T Consensus       240 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         240 EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence             47899999999999999999998   789999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=4.1e-46  Score=343.93  Aligned_cols=254  Identities=29%  Similarity=0.403  Sum_probs=213.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++.....   .....+.+|+.+++.++||||+++++.+...+..|+
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i   83 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI   83 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence            34689999999999999999999999999999999865421   223568899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++..........
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06646          84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR  163 (267)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccccc
Confidence            99999999999999888889999999999999999999999999999999999999999999999999987554332223


Q ss_pred             cccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC-----CCCCCHhHHH
Q 016991          167 HTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-----PFWFSTGATS  239 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-----p~~~s~~~~~  239 (379)
                      ....|++.|+|||.+..  ....+.++|+||+||++|+|++|+.||...+.......+....+..     +..++..+.+
T Consensus       164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (267)
T cd06646         164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHN  243 (267)
T ss_pred             CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHH
Confidence            44578899999999853  2223478999999999999999999996554333222222222222     2236889999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                      ||++||..||.+|||++++++|+|
T Consensus       244 li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         244 FVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHhhCChhhCcCHHHHhcCCC
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=7.1e-46  Score=341.35  Aligned_cols=248  Identities=35%  Similarity=0.675  Sum_probs=220.8

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||.|+||.||+|.+..++..||+|++.+.........+.+.+|+.+++.++||||+++++.+.+....|+++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            79999999999999999999999999876655555567899999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCC
Q 016991           97 FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV  176 (379)
Q Consensus        97 ~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~  176 (379)
                      .+++.+...+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... .....+|++.|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~  159 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFCGTPEYV  159 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-ccccccCCcCcc
Confidence            9999888889999999999999999999999999999999999999999999999999987655432 223457899999


Q ss_pred             chhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHH--hcccCCCCCCCHhHHHHHHHccCCCCCCC
Q 016991          177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKIN--AAEFSCPFWFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       177 aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~--~~~~~~~i~--~~~~~~p~~~s~~~~~li~~~L~~dP~~R  252 (379)
                      |||.+.+..+ +.++|+||+|+++|+|++|..||....  .......+.  ......|...++++.++|.+||..||.+|
T Consensus       160 ~PE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R  238 (262)
T cd05572         160 APEIILNKGY-DFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEER  238 (262)
T ss_pred             ChhHhcCCCC-CChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhC
Confidence            9999877665 489999999999999999999998766  556666665  45566777789999999999999999999


Q ss_pred             CC-----hHhHhcCccccc
Q 016991          253 IR-----IEGIRKHPWFRK  266 (379)
Q Consensus       253 ~s-----~~~il~hp~f~~  266 (379)
                      |+     +.|+++||||+.
T Consensus       239 ~~~~~~~~~~l~~~~~~~~  257 (262)
T cd05572         239 LGNLKGGIKDIKKHKWFNG  257 (262)
T ss_pred             cCCcccCHHHHhcChhhhC
Confidence            99     999999999974

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=3.8e-46  Score=347.41  Aligned_cols=255  Identities=29%  Similarity=0.432  Sum_probs=215.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.+..... ...+.+.+|+.+++.++||||+++++++...+..|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence            47999999999999999999999999999999986543322 34467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++++.|..+......+++.++..++.||+.||.|||+.|++||||+|+||++++++.++|+|||++............
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (286)
T cd07846          80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD  159 (286)
T ss_pred             ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCc
Confidence            99999988887776667999999999999999999999999999999999999999999999999998765443333445


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------ccC-
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------EFS-  228 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------~~~-  228 (379)
                      ..++..|+|||++.+....+.++||||+||++|+|++|++||...+.......+...                   ... 
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07846         160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL  239 (286)
T ss_pred             ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence            668899999999876555568999999999999999999999766543322222110                   000 


Q ss_pred             -----------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 -----------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 -----------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                 .++.++..+.+|+.+||+.||.+||++.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                       123468889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=1.3e-45  Score=343.55  Aligned_cols=255  Identities=30%  Similarity=0.467  Sum_probs=217.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      -|++.+.||.|+||.||+|.+..++..+|+|.+....   ....+.+.+|+.+++.++||||+++++.+...+..|+|+|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e   82 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   82 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence            3788999999999999999999999999999986532   3345678889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           90 FVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        90 ~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |+++++|...+.. ...+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++............
T Consensus        83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  162 (282)
T cd06643          83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS  162 (282)
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccc
Confidence            9999999887765 467999999999999999999999999999999999999999999999999998754433233345


Q ss_pred             cccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHH
Q 016991          169 TCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLI  241 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li  241 (379)
                      ..|++.|+|||++..    ....+.++||||+||++|+|++|.+||...+.......+...   ....|..++.++.++|
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFL  242 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHH
Confidence            578999999999842    222347899999999999999999999877665554444333   2234566889999999


Q ss_pred             HHccCCCCCCCCChHhHhcCcccccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||+.||.+||+++++++||||...
T Consensus       243 ~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         243 KKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHccCChhhCcCHHHHhcCCCEecc
Confidence            99999999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.2e-46  Score=356.11  Aligned_cols=251  Identities=22%  Similarity=0.376  Sum_probs=204.9

Q ss_pred             eccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||.||+|.+     ..++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++..
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (338)
T cd05102           5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTK   82 (338)
T ss_pred             chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence            346899999999999999999975     2456789999986532  222346788999999999 89999999998875


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhc--------------------------------------------------------
Q 016991           81 -RTKVYIILEFVTGGELFDKIVHQ--------------------------------------------------------  103 (379)
Q Consensus        81 -~~~~~lv~E~~~gg~L~~~l~~~--------------------------------------------------------  103 (379)
                       .+.+|++|||+++|+|.+++...                                                        
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (338)
T cd05102          83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE  162 (338)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence             45689999999999999998652                                                        


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--cccccccCCCC
Q 016991          104 ------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNY  175 (379)
Q Consensus       104 ------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y  175 (379)
                            ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........  ......+++.|
T Consensus       163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y  242 (338)
T cd05102         163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW  242 (338)
T ss_pred             ccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence                  2377788899999999999999999999999999999999999999999999875433211  11233456789


Q ss_pred             CchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH-HHHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCC
Q 016991          176 VAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT-LYKKINAA-EFSCPFWFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       176 ~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~-~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R  252 (379)
                      +|||++.+..+ +.++|||||||++|+|++ |..||.+..... ....+... ....|..+++++.+++.+||+.||.+|
T Consensus       243 ~aPE~~~~~~~-~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  321 (338)
T cd05102         243 MAPESIFDKVY-TTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKER  321 (338)
T ss_pred             cCcHHhhcCCC-CcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            99999987666 489999999999999997 999998765433 33333322 344567789999999999999999999


Q ss_pred             CChHhHhc
Q 016991          253 IRIEGIRK  260 (379)
Q Consensus       253 ~s~~~il~  260 (379)
                      ||+.++++
T Consensus       322 Ps~~el~~  329 (338)
T cd05102         322 PTFSALVE  329 (338)
T ss_pred             cCHHHHHH
Confidence            99999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=8.2e-46  Score=344.98  Aligned_cols=249  Identities=30%  Similarity=0.457  Sum_probs=206.9

Q ss_pred             eecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHH---HhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           16 TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM---KIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l---~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      .||+|+||.||++.+..+|..+|+|.+.+.............+|..++   ...+||||+.+++.+...+..|+||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999999999999999999765443332223344444443   34579999999999999999999999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccC
Q 016991           93 GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT  172 (379)
Q Consensus        93 gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt  172 (379)
                      |++|.+++...+.+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......  ......|+
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~  158 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGT  158 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--CccCcCCC
Confidence            9999999988889999999999999999999999999999999999999999999999999998644332  22345799


Q ss_pred             CCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCC
Q 016991          173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       173 ~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP  249 (379)
                      +.|+|||.+.+....+.++||||+||++|+|++|..||.....   ..............|..+++++.++|++||..||
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  238 (279)
T cd05633         159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDV  238 (279)
T ss_pred             cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence            9999999986544445899999999999999999999965432   2222233334456677889999999999999999


Q ss_pred             CCCC-----ChHhHhcCccccc
Q 016991          250 KTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       250 ~~R~-----s~~~il~hp~f~~  266 (379)
                      ++|+     |+.++++||||+.
T Consensus       239 ~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         239 SKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             HHhcCCCCCCHHHHHhCccccC
Confidence            9999     6999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.4e-45  Score=346.25  Aligned_cols=256  Identities=26%  Similarity=0.433  Sum_probs=219.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ....+|++.+.||+|+||.||+|.+..++..||+|.+......   ..+.+.+|+.+++.++||||+++++.+......|
T Consensus        17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~   93 (296)
T cd06654          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELW   93 (296)
T ss_pred             CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence            3457999999999999999999999999999999998764432   2467889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||++|++|.+++.. ..+++.++..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus        94 lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~  172 (296)
T cd06654          94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  172 (296)
T ss_pred             EeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc
Confidence            99999999999998864 57899999999999999999999999999999999999999999999999988765443333


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-c--ccCCCCCCCHhHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA-A--EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~-~--~~~~p~~~s~~~~~li~  242 (379)
                      .....|++.|+|||.+.+..+ +.++||||+||++|+|++|+.||...+.......+.. .  ....|..+++.+.++|.
T Consensus       173 ~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (296)
T cd06654         173 RSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  251 (296)
T ss_pred             cCcccCCccccCHHHHcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHH
Confidence            345578999999999977655 4899999999999999999999987665332222222 1  12345568899999999


Q ss_pred             HccCCCCCCCCChHhHhcCccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +||..||.+|||+.++++||||..
T Consensus       252 ~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         252 RCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             HHCcCCcccCcCHHHHhhChhhhc
Confidence            999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.6e-45  Score=337.66  Aligned_cols=253  Identities=28%  Similarity=0.579  Sum_probs=221.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|+||.||.+.+..+|+.||+|.+....... ...+.+.+|+.+++.++||||+++++++...+..|+|+|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            6999999999999999999999999999999987644322 344678999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+++++|.+.+....  .+++.++..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  159 (256)
T cd08218          80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR  159 (256)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence            999999999887543  578999999999999999999999999999999999999999999999999876554333334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~  246 (379)
                      ...|++.|+|||++.+..+ +.++|+||+||++++|++|..||...+.......+..... ..|..++.++.++|.+||+
T Consensus       160 ~~~~~~~~~~pe~~~~~~~-~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08218         160 TCIGTPYYLSPEICENRPY-NNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFK  238 (256)
T ss_pred             hccCCccccCHHHhCCCCC-CCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhh
Confidence            4568899999999977654 4899999999999999999999988777766666554443 4566789999999999999


Q ss_pred             CCCCCCCChHhHhcCccc
Q 016991          247 PNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f  264 (379)
                      .+|.+||++.++++||||
T Consensus       239 ~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         239 RNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CChhhCcCHHHHhhCcCC
Confidence            999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=1e-45  Score=346.92  Aligned_cols=261  Identities=31%  Similarity=0.446  Sum_probs=219.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL--KHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +|++.+.||+|+||.||+|.+..+|+.||||.+......  .......+..|+.+++.++|+||+++++++.+.+..|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            589999999999999999999999999999999765433  122345677899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++..........
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence            9999 999999998766 79999999999999999999999999999999999999999999999999987665443334


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc----------------c---
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE----------------F---  227 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~----------------~---  227 (379)
                      ....+++.|+|||.+.+....+.++|+||+||++|+|++|.+||.+.+......++....                +   
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (298)
T cd07841         160 THQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF  239 (298)
T ss_pred             cccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc
Confidence            445678899999998665555689999999999999999999998766544444332110                0   


Q ss_pred             ----C-----CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCC
Q 016991          228 ----S-----CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       228 ----~-----~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                          .     .....+.++.++|.+||.+||++|||+.++++||||+....+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         240 KPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             cccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence                0     0123478899999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.3e-45  Score=346.64  Aligned_cols=255  Identities=26%  Similarity=0.449  Sum_probs=220.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ...+|++.+.||.|+||.||+|.+..+|+.||+|.+.....   ...+.+.+|+.+++.++||||+++++.+......|+
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   93 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFV   93 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEE
Confidence            34579999999999999999999999999999999865432   234678899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |+||+++++|..++.. ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++..........
T Consensus        94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~  172 (296)
T cd06655          94 VMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR  172 (296)
T ss_pred             EEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC
Confidence            9999999999988865 578999999999999999999999999999999999999999999999999987654433333


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHHHH
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~  243 (379)
                      ...+|++.|+|||.+.+..+ +.++|+||+||++|+|++|..||...+.......+...   ....|..+++.+.++|.+
T Consensus       173 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  251 (296)
T cd06655         173 STMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNR  251 (296)
T ss_pred             CCcCCCccccCcchhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHH
Confidence            45578899999999977665 48999999999999999999999887654433333322   233556689999999999


Q ss_pred             ccCCCCCCCCChHhHhcCccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||..||.+|||+.++++||||+.
T Consensus       252 ~l~~dp~~Rpt~~~il~~~~~~~  274 (296)
T cd06655         252 CLEMDVEKRGSAKELLQHPFLKL  274 (296)
T ss_pred             HhhcChhhCCCHHHHhhChHhhh
Confidence            99999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=9.4e-46  Score=342.23  Aligned_cols=253  Identities=26%  Similarity=0.395  Sum_probs=211.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe------
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS------   80 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~------   80 (379)
                      -+.|++.+.||+|+||.||+|.+..+++.||+|++.....    ....+.+|+.+++.+ +||||+++++++..      
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            3679999999999999999999999999999999865421    235678899999998 69999999999865      


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      ...+|++|||+.+++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~  160 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  160 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence            34689999999999999998763  3689999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCcccccccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc--CCCCC
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF--SCPFW  232 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~  232 (379)
                      ............|++.|+|||++...    ...+.++|+||+||++|+|++|..||...........+.....  ..+..
T Consensus       161 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  240 (272)
T cd06637         161 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK  240 (272)
T ss_pred             cccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCC
Confidence            54433334456799999999998632    2235789999999999999999999976655443333332221  22345


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      ++.++.+||.+||..||.+|||+.++++||||
T Consensus       241 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         241 WSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            78899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.2e-45  Score=348.67  Aligned_cols=263  Identities=29%  Similarity=0.420  Sum_probs=217.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--Ce
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TK   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~   83 (379)
                      ..+++|++.+.||+|+||.||+|.+..+|+.||+|++....... .....+.+|+.+++.++|+||+++++++...  +.
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDS   82 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCe
Confidence            46789999999999999999999999999999999986543221 2223456799999999999999999998754  57


Q ss_pred             EEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      +|+||||+.+ +|.+.+.. ...+++.++..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++......
T Consensus        83 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          83 IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence            8999999964 78887765 367899999999999999999999999999999999999999999999999998765543


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----------------
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-----------------  225 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-----------------  225 (379)
                      ........+++.|+|||++.+....+.++||||+||++|+|++|++||.+.+.......+...                 
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07845         162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL  241 (309)
T ss_pred             cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence            233334456788999999876555568999999999999999999999887766555444321                 


Q ss_pred             --ccCCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          226 --EFSCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       226 --~~~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                        .+..+           .+.++++.+||.+||++||++|||+++++.||||+....+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~  299 (309)
T cd07845         242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP  299 (309)
T ss_pred             cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence              11111           2358899999999999999999999999999999865544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=1.5e-45  Score=339.86  Aligned_cols=253  Identities=27%  Similarity=0.469  Sum_probs=215.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc---cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI---LKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~---~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +|++++.||.|+||.||+|.+ .+|+.+|+|.+.....   ........+.+|+.+++.++|+||+++++++.+.+..|+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            589999999999999999987 4789999999865432   122344678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-----
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-----  161 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-----  161 (379)
                      ++||++|++|.+++.+.+.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.....     
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence            999999999999998888899999999999999999999999999999999999999999999999998864321     


Q ss_pred             -CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhH
Q 016991          162 -GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGA  237 (379)
Q Consensus       162 -~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~  237 (379)
                       .........|+..|+|||++.+..+ +.++|+|||||++|+|++|..||...+.......+...   ....|..++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESGY-GRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAA  238 (265)
T ss_pred             cccccccccCCCccccChhhhcCCCC-cchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHH
Confidence             1122334568999999999977665 48999999999999999999999876544433333322   234566789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .++|.+||+++|.+||++.++++||||
T Consensus       239 ~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         239 IDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.6e-45  Score=339.10  Aligned_cols=254  Identities=28%  Similarity=0.443  Sum_probs=218.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||.|+||+||+|....++..+|+|++.......  ..+.+.+|+.+++.++|+||+++++.+......|+++
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   78 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM   78 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence            47999999999999999999999999999999987654333  4578999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-
Q 016991           89 EFVTGGELFDKIVHQ---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-  164 (379)
Q Consensus        89 E~~~gg~L~~~l~~~---~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-  164 (379)
                      |+++|++|.+.+...   ..+++..++.++.||+.||.|||+.|++||||+|+||++++++.++|+|||++........ 
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~  158 (267)
T cd06610          79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR  158 (267)
T ss_pred             eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence            999999999999764   4589999999999999999999999999999999999999999999999999876544222 


Q ss_pred             ---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCC-----CCCCH
Q 016991          165 ---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCP-----FWFST  235 (379)
Q Consensus       165 ---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p-----~~~s~  235 (379)
                         .....+|+..|+|||++......+.++|+||+||++++|++|+.||...+.......+..... ..+     ..+++
T Consensus       159 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd06610         159 TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK  238 (267)
T ss_pred             cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccH
Confidence               223456899999999997764456899999999999999999999987766555554433322 121     24688


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .+.+++.+||..||.+|||+.++++||||
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         239 SFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=9.7e-46  Score=347.53  Aligned_cols=258  Identities=26%  Similarity=0.434  Sum_probs=219.8

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +....+|++.+.||.|+||.||+|.+..+|+.||+|.+......   ..+.+.+|+.+++.++||||+++++++...+..
T Consensus        15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~   91 (297)
T cd06656          15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDEL   91 (297)
T ss_pred             CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEE
Confidence            34458999999999999999999999999999999998654322   236688999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||++|++|.+++.+ ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........
T Consensus        92 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          92 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             EEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            999999999999998865 5689999999999999999999999999999999999999999999999999876544333


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li  241 (379)
                      ......|++.|+|||.+.+..+ +.++|+||+||++|+|++|..||...+.......+...   ....|..+++.+.+|+
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFL  249 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHH
Confidence            3345678999999999987665 48999999999999999999999776543222222211   2234556789999999


Q ss_pred             HHccCCCCCCCCChHhHhcCcccccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||..||.+||+++++++||||+..
T Consensus       250 ~~~l~~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         250 NRCLEMDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             HHHccCChhhCcCHHHHhcCchhccc
Confidence            99999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.5e-46  Score=360.98  Aligned_cols=251  Identities=24%  Similarity=0.359  Sum_probs=206.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...+|++++.||+|+||.||++...  .++..||+|.+...        ....+|+.+++.++||||+++++++......
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~  161 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTV  161 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence            3457999999999999999999764  35678999987543        2345799999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |++||++. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... 
T Consensus       162 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~  240 (392)
T PHA03207        162 CMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD  240 (392)
T ss_pred             EEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence            99999994 6898999777889999999999999999999999999999999999999999999999999987544322 


Q ss_pred             -ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHH----h-----------
Q 016991          164 -ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP---TLYKKIN----A-----------  224 (379)
Q Consensus       164 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~---~~~~~i~----~-----------  224 (379)
                       ......+||+.|+|||++....+. .++||||+||++|+|++|..||.+....   .....+.    .           
T Consensus       241 ~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~  319 (392)
T PHA03207        241 TPQCYGWSGTLETNSPELLALDPYC-AKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST  319 (392)
T ss_pred             cccccccccccCccCHhHhcCCCCC-chhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence             122345799999999999877664 8999999999999999999999664321   1111110    0           


Q ss_pred             --------------cccCCCC-----CCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          225 --------------AEFSCPF-----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       225 --------------~~~~~p~-----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                    ..+..|.     .++.++.++|++||..||.+|||+.+++.||||.+.
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence                          0011121     246788999999999999999999999999999753

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.1e-45  Score=340.90  Aligned_cols=255  Identities=27%  Similarity=0.481  Sum_probs=216.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc---chHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL---KHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~---~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +|+.++.||+|+||.||.|.+..+++.||+|++......   .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            588999999999999999999999999999998754321   12245779999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCCc--
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQGV--  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~~--  163 (379)
                      |+||++|++|.+++...+.+++..+..++.||+.||.|||++|++||||+|+||+++.++ .++|+|||++.......  
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            999999999999998888899999999999999999999999999999999999998876 59999999986554321  


Q ss_pred             --ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-----hcccCCCCCCCHh
Q 016991          164 --ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN-----AAEFSCPFWFSTG  236 (379)
Q Consensus       164 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~-----~~~~~~p~~~s~~  236 (379)
                        .......|+..|+|||++.+..+ +.++|+||+|+++++|++|..||...+.......+.     ......|..++++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQY-GRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPG  239 (268)
T ss_pred             CCccccccccccceeCHhHhccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHH
Confidence              11223468889999999977655 489999999999999999999997654332222221     2234456678999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      +.+++.+||+.||.+|||+.++++||||+
T Consensus       240 ~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         240 LRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.2e-45  Score=351.69  Aligned_cols=254  Identities=21%  Similarity=0.362  Sum_probs=206.1

Q ss_pred             eeeeeeccc--CCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           12 EVGRTIGEG--TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        12 ~~~~~LG~G--~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +++++||+|  +||+||++.+..+|+.||+|.++.... .....+.+.+|+.+++.++||||+++++++..++..|+|||
T Consensus         1 ~~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   79 (327)
T cd08227           1 ELLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS   79 (327)
T ss_pred             ChhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEe
Confidence            357889999  789999999999999999999876543 23345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-Cc---
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-GV---  163 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-~~---  163 (379)
                      |+++|+|.+++...  ..+++..++.++.|++.||.|||++||+||||||+|||++.++.++++||+.+..... +.   
T Consensus        80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (327)
T cd08227          80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR  159 (327)
T ss_pred             ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence            99999999998653  4589999999999999999999999999999999999999999999999986533211 10   


Q ss_pred             ---ccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-----------
Q 016991          164 ---ELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-----------  228 (379)
Q Consensus       164 ---~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-----------  228 (379)
                         .......++..|+|||++.+. ...+.++||||+||++|+|++|+.||..................           
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (327)
T cd08227         160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAE  239 (327)
T ss_pred             ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhh
Confidence               111234577889999999753 22358999999999999999999999765443322221111100           


Q ss_pred             -----------------------------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          229 -----------------------------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       229 -----------------------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                                         ....+++++.+||.+||+.||++|||++++++||||+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         240 ELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             hcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                                               11124678999999999999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-45  Score=341.90  Aligned_cols=255  Identities=27%  Similarity=0.452  Sum_probs=221.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||.|+||.||+|.+..+++.||+|++.....  ......+.+|+.+++.++||||+++++.+.+....|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM   78 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence            479999999999999999999999999999999876432  223467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||+++++|.+++... ++++..++.++.|++.|+.|||+.|++||||+|+||+++.++.++|+|||++............
T Consensus        79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence            999999999998764 8999999999999999999999999999999999999999999999999998766543333345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCC-CCHhHHHHHHHccC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFW-FSTGATSLIHKILD  246 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~-~s~~~~~li~~~L~  246 (379)
                      ..|++.|+|||++.+..+ +.++||||+||++|+|++|..||...+.......+.... ...+.. +++++.+++.+||.
T Consensus       158 ~~~~~~y~~PE~~~~~~~-~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  236 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGY-DEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLN  236 (274)
T ss_pred             ccCCccccChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhh
Confidence            678899999999987664 589999999999999999999998766555444444332 333444 78999999999999


Q ss_pred             CCCCCCCChHhHhcCcccccc
Q 016991          247 PNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .||.+|||++++++||||+..
T Consensus       237 ~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         237 KDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             CChhhCcCHHHHhhChhhcCC
Confidence            999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=1.7e-45  Score=342.65  Aligned_cols=249  Identities=31%  Similarity=0.474  Sum_probs=210.0

Q ss_pred             eecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHH---HHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           16 TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI---SIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei---~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      .||+|+||.||+|.+..+++.||||.+.+..............|.   ..++...||+|+++++++...+..|+||||++
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999999999999999999765433222222233333   34555689999999999999999999999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccC
Q 016991           93 GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT  172 (379)
Q Consensus        93 gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt  172 (379)
                      |++|.+++...+.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++......  .....+|+
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~  158 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGT  158 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CCcCcCCC
Confidence            9999999988888999999999999999999999999999999999999999999999999998654332  22355799


Q ss_pred             CCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCC
Q 016991          173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET---DLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       173 ~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP  249 (379)
                      ..|+|||++.+....+.++||||+||++|+|++|..||.+.   ........+.......|..+|+++.+++.+||..||
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p  238 (278)
T cd05606         159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDV  238 (278)
T ss_pred             cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCH
Confidence            99999999975544458999999999999999999999776   333444445555667777789999999999999999


Q ss_pred             CCCC-----ChHhHhcCccccc
Q 016991          250 KTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       250 ~~R~-----s~~~il~hp~f~~  266 (379)
                      .+||     ++.++++||||+.
T Consensus       239 ~~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         239 NRRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             HhccCCCCCCHHHHHhCccccC
Confidence            9999     9999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.3e-45  Score=381.21  Aligned_cols=265  Identities=28%  Similarity=0.429  Sum_probs=219.1

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--   80 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--   80 (379)
                      .+...+++|++++.||.|+||+||+|.+..++..||+|++...... ......+..|+.+++.++|||||+++++|..  
T Consensus         7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~   85 (1021)
T PTZ00266          7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA   85 (1021)
T ss_pred             CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence            3567789999999999999999999999999999999998765433 3345678999999999999999999998854  


Q ss_pred             CCeEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-------CceeecCCCCcEEEcc-----
Q 016991           81 RTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSK-------GVYHRDLKPENLLLDS-----  144 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~-------gi~HrDlkp~NIll~~-----  144 (379)
                      ...+|+||||+++++|.++|..    .+.+++..++.++.||+.||.|||+.       +|+||||||+||||+.     
T Consensus        86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l  165 (1021)
T PTZ00266         86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI  165 (1021)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence            4679999999999999998865    35799999999999999999999985       4999999999999964     


Q ss_pred             ------------CCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCC
Q 016991          145 ------------YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFG  211 (379)
Q Consensus       145 ------------~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~  211 (379)
                                  .+.+||+|||++...... ......+||+.|+|||++.+. ...+.++||||||||||+|++|..||.
T Consensus       166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~-s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~  244 (1021)
T PTZ00266        166 GKITAQANNLNGRPIAKIGDFGLSKNIGIE-SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH  244 (1021)
T ss_pred             ccccccccccCCCCceEEccCCcccccccc-ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                        235899999998765432 223456799999999998643 334689999999999999999999997


Q ss_pred             CCChH-HHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          212 ETDLP-TLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       212 ~~~~~-~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      ..+.. .+...+...........++++.+||..||+.+|.+||++.++|.|||++....
T Consensus       245 ~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~~  303 (1021)
T PTZ00266        245 KANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVGP  303 (1021)
T ss_pred             cCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcCC
Confidence            65543 34444443332222457899999999999999999999999999999975543

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=1e-45  Score=342.80  Aligned_cols=255  Identities=33%  Similarity=0.635  Sum_probs=228.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ++|.+.+.||.|+||.||+|.+..+|..||+|++.+.........+.+.+|..+++.++ ||||+++++++...+..+++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            47999999999999999999999999999999998765545555577889999999998 99999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc----
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV----  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~----  163 (379)
                      |||+++++|.+.+...+.+++..++.++.|++.||.|||+.|++|+||+|+||+++.+++++|+|||++.......    
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence            9999999999999988899999999999999999999999999999999999999999999999999987544321    


Q ss_pred             ----------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc
Q 016991          164 ----------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF  227 (379)
Q Consensus       164 ----------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~  227 (379)
                                      .......|+..|+|||++.+..+ +.++|+||||++++++++|+.||...+.....+.+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  239 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPA-GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY  239 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCCC-ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC
Confidence                            11223457889999999876554 5899999999999999999999998887777777777778


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCCh----HhHhcCccc
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRI----EGIRKHPWF  264 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~----~~il~hp~f  264 (379)
                      ..|..+++.+.++|.+||+.||.+|||+    +++++||||
T Consensus       240 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         240 SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            8888899999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=3.8e-45  Score=337.60  Aligned_cols=255  Identities=29%  Similarity=0.485  Sum_probs=215.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL--KHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RTKV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~~~   84 (379)
                      ..|+..+.||+|+||.||+|.+..+|..||+|.+......  .......+.+|+.+++.++||||+++++++..  ....
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            3689999999999999999999999999999998654322  22345678999999999999999999998865  4678


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--  162 (379)
                      ++++||+++++|.+++...+.+++...+.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......  
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            999999999999999988888999999999999999999999999999999999999999999999999998654321  


Q ss_pred             -cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHH
Q 016991          163 -VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATS  239 (379)
Q Consensus       163 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~  239 (379)
                       ........|+..|+|||.+.+..+ +.++|+||+||++|+|++|+.||...+.......+...  ...+|..+++.+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGY-GRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARD  240 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCC-CchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHH
Confidence             112233568889999999977655 48999999999999999999999876654444333322  34456778999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      +| +|+..+|++||+++++++||||+
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcccc
Confidence            99 56668999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=2.8e-45  Score=341.32  Aligned_cols=254  Identities=30%  Similarity=0.468  Sum_probs=214.8

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++++.||+|+||.||+|.+..+|..||+|++...... ......+.+|+.+++.++||||+++++++......|+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   79 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME   79 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence            699999999999999999999999999999998765432 2345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-cccc
Q 016991           90 FVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-ELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~~~~  167 (379)
                      |+ |++|.+++.. ...+++.+++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++....... ....
T Consensus        80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (286)
T cd07832          80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS  158 (286)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence            99 9999998865 3568999999999999999999999999999999999999999999999999987654432 2234


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------ccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------EFS  228 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------~~~  228 (379)
                      ...|+..|+|||++.+....+.++||||+||++|+|++|.+||.+.+.......+...                   ...
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07832         159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKIT  238 (286)
T ss_pred             cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhccc
Confidence            5678999999999876665568999999999999999999999776654433332210                   000


Q ss_pred             -----------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          229 -----------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       229 -----------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                                 .....+.++.+||.+||+.||.+|||++++++||||.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         239 FPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence                       0123578899999999999999999999999999983

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-45  Score=343.55  Aligned_cols=246  Identities=15%  Similarity=0.184  Sum_probs=211.8

Q ss_pred             Ceeee--eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCe
Q 016991           10 KYEVG--RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----RTK   83 (379)
Q Consensus        10 ~y~~~--~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----~~~   83 (379)
                      +++..  ..||+|++|.||+|..  +|+.||||++.+.........+.+.+|+.+|++++||||+++++++.+    ...
T Consensus        19 ~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~   96 (283)
T PHA02988         19 DIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPR   96 (283)
T ss_pred             HcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCc
Confidence            34444  6799999999999988  689999999987654454556788999999999999999999999876    457


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      +++||||++||+|.+++...+.+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus        97 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~  176 (283)
T PHA02988         97 LSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP  176 (283)
T ss_pred             eEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence            899999999999999998888899999999999999999999984 9999999999999999999999999998754332


Q ss_pred             cccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATS  239 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~  239 (379)
                         .....|++.|+|||++.+. ...+.++|||||||++|+|++|..||.+.+....+..+...  .+..|..+++++.+
T Consensus       177 ---~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~  253 (283)
T PHA02988        177 ---PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKC  253 (283)
T ss_pred             ---cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHH
Confidence               2345688999999999752 23358999999999999999999999988877777776433  44556678999999


Q ss_pred             HHHHccCCCCCCCCChHhHhc
Q 016991          240 LIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~  260 (379)
                      ||.+||+.||.+|||+.++++
T Consensus       254 li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        254 IVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHHHHhcCCcccCcCHHHHHH
Confidence            999999999999999999986

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=5.9e-45  Score=333.91  Aligned_cols=253  Identities=28%  Similarity=0.499  Sum_probs=223.0

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|+||.||.+.+..+++.+++|.+....... .....+.+|+.+++.++|+||+++++++.+.+..+++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence            6999999999999999999999999999999987654333 345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+++++|.+++...  ..+++.++..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||++...........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  159 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAE  159 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccccc
Confidence            99999999999765  4689999999999999999999999999999999999999999999999999876554433345


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-CCCCCCHhHHHHHHHccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKILD  246 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~  246 (379)
                      ...|++.|+|||++.+..+ +.++|+||+|+++|+|++|..||...+.......+....+. .+..++.++.++|.+||.
T Consensus       160 ~~~~~~~y~ape~~~~~~~-~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd08221         160 TVVGTPYYMSPELCQGVKY-NFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQ  238 (256)
T ss_pred             ccCCCccccCHhhcCCCCC-CCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcc
Confidence            5678999999999977664 48899999999999999999999888777777666655443 345678999999999999


Q ss_pred             CCCCCCCChHhHhcCccc
Q 016991          247 PNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f  264 (379)
                      .||.+||++.++++|||+
T Consensus       239 ~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         239 QDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             cCcccCCCHHHHhhCcCC
Confidence            999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-45  Score=335.57  Aligned_cols=251  Identities=31%  Similarity=0.470  Sum_probs=216.6

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||.|+||.||+|.+..++..+|+|++.....   ...+.+.+|+.+++.++||||+++++++......|++|
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence            689999999999999999999999999999999875432   24578899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus        80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  159 (262)
T cd06613          80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK  159 (262)
T ss_pred             eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence            999999999988776 7899999999999999999999999999999999999999999999999999876544322334


Q ss_pred             ccccCCCCCchhhhccC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-----CCCCCCHhHHH
Q 016991          168 TTCGTPNYVAPEVLSNR---GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-----CPFWFSTGATS  239 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~---~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-----~p~~~s~~~~~  239 (379)
                      ...|+..|+|||.+.+.   .+ +.++|+||+||++|+|++|.+||.+.+.......+....+.     .+...+.++.+
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~-~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGY-DGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHD  238 (262)
T ss_pred             cccCCccccCchhhcccccCCc-CchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHH
Confidence            45788899999998765   44 48999999999999999999999877655444444333222     23345788999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                      +|.+||..||..|||+.+++.|||
T Consensus       239 li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         239 FIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHcCCChhhCCCHHHHhcCCC
Confidence            999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-48  Score=362.83  Aligned_cols=259  Identities=34%  Similarity=0.594  Sum_probs=242.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+.+.+++.+||-|+||.|-++........+|+|++++..+.+....+.+..|-.+|...+.|.||++|..|.+..++|
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            45667888999999999999999887666679999999988888888899999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +.||-|-||+|+..+..++.+.+..++.|+..+++|++|||++||++|||||||+++|.+|-+||.|||++.....+ ..
T Consensus       497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g-~K  575 (732)
T KOG0614|consen  497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG-RK  575 (732)
T ss_pred             hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC-Cc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877665 45


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~  243 (379)
                      ..+.||||.|+|||++.+++.+ .++|.||||+++||||+|.+||.+.+.+..|+.|..+  ...+|..++..+.+||++
T Consensus       576 TwTFcGTpEYVAPEIILnKGHD-~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~  654 (732)
T KOG0614|consen  576 TWTFCGTPEYVAPEIILNKGHD-RAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKK  654 (732)
T ss_pred             eeeecCCcccccchhhhccCcc-hhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHH
Confidence            6799999999999999999987 9999999999999999999999999999999999876  367899999999999999


Q ss_pred             ccCCCCCCCCC-----hHhHhcCccccc
Q 016991          244 ILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ++..+|..|..     +.+|.+|.||..
T Consensus       655 LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  655 LCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             HHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            99999999996     799999999964

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-45  Score=342.21  Aligned_cols=255  Identities=29%  Similarity=0.471  Sum_probs=208.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++.+.||+|++|.||+|.+..+++.||||.+.......  ....+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTL   80 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEE
Confidence            4688999999999999999999999999999999987543221  22346689999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||+.+ +|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~  159 (291)
T cd07844          81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKT  159 (291)
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcc
Confidence            9999975 898888654 46899999999999999999999999999999999999999999999999998654332222


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhc-------------------
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYKKINAA-------------------  225 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~~~i~~~-------------------  225 (379)
                      .....++..|+|||++.+....+.++||||+||++|+|++|+.||.+.+ .......+...                   
T Consensus       160 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (291)
T cd07844         160 YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFK  239 (291)
T ss_pred             ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccc
Confidence            2334578899999998765545689999999999999999999997655 22222111100                   


Q ss_pred             ccCC-----------CCCCC--HhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          226 EFSC-----------PFWFS--TGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       226 ~~~~-----------p~~~s--~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      ....           ...++  .++.++|.+||++||.+|||+.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         240 PYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0000           01234  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=5.9e-45  Score=335.96  Aligned_cols=255  Identities=29%  Similarity=0.497  Sum_probs=215.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc--cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RTKV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~~~   84 (379)
                      .+|++++.||+|+||.||.|.+..+|..||||.+.....  ......+.+.+|+.+++.++||||+++++++.+  ...+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            579999999999999999999999999999998864321  122345788999999999999999999998876  3578


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--  162 (379)
                      |++|||++|++|.+++.+.+.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......  
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            899999999999999988788999999999999999999999999999999999999999999999999988754321  


Q ss_pred             -cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHH
Q 016991          163 -VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATS  239 (379)
Q Consensus       163 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~  239 (379)
                       ........|+..|+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+...  ....|..++..+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGY-GRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRD  240 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCC-CcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence             112234568999999999977665 58999999999999999999999876554444333322  23356667889999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      +|++|+. +|++||+++++++|||++
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            9999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=5.2e-45  Score=334.05  Aligned_cols=254  Identities=28%  Similarity=0.473  Sum_probs=219.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc--cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +|+..+.||+|+||+||+|.+..++..||+|.+.....  ......+.+.+|+.+++.++||||+++++++.+....|++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            58889999999999999999998999999999865432  1233457789999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      +||++|++|.+++.+.+.+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++....... ...
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~  159 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-FAK  159 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc-ccc
Confidence            9999999999999888889999999999999999999999999999999999999999999999999987654332 234


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cccCCCCCCCHhHHHHHHHcc
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA--AEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~~L  245 (379)
                      ...|++.|+|||.+......+.++|+||+||++|+|++|+.||...........+..  .....|..+++++.+++.+||
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         160 SFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             ccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHh
Confidence            566889999999987655345899999999999999999999977664443333333  223456678999999999999


Q ss_pred             CCCCCCCCChHhHhcCccc
Q 016991          246 DPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f  264 (379)
                      +.+|.+||++.+++.|||+
T Consensus       240 ~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         240 QRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hcCcccCcCHHHHhcCCCC
Confidence            9999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.7e-45  Score=340.31  Aligned_cols=250  Identities=26%  Similarity=0.387  Sum_probs=210.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..++..||+|++....  .....+.+.+|+.+++.++||||+++++.+...+..++||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   78 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT   78 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence            36899999999999999999999999999999987643  2234467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||+++++|..+    ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++......  ....
T Consensus        79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--~~~~  152 (279)
T cd06619          79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--IAKT  152 (279)
T ss_pred             ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc--cccC
Confidence            99999988643    46789999999999999999999999999999999999999999999999998754332  2345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-------HHHHHHHHhcc-cCC-CCCCCHhHHH
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL-------PTLYKKINAAE-FSC-PFWFSTGATS  239 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-------~~~~~~i~~~~-~~~-p~~~s~~~~~  239 (379)
                      .+|+..|+|||++.+..+ +.++|+||+||++|+|++|..||.....       ....+.+.... ... ....++++.+
T Consensus       153 ~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (279)
T cd06619         153 YVGTNAYMAPERISGEQY-GIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVH  231 (279)
T ss_pred             CCCChhhcCceeecCCCC-CCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHH
Confidence            679999999999987665 5899999999999999999999964321       12222222221 112 2347889999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +|.+||+.||.+||+++++++||||+..
T Consensus       232 li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         232 FITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            9999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2.1e-45  Score=341.50  Aligned_cols=248  Identities=31%  Similarity=0.512  Sum_probs=213.1

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||+|+||+||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+..|+||||++|++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999999999999999999765443333445667899999999999999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCC
Q 016991           97 FDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN  174 (379)
Q Consensus        97 ~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~  174 (379)
                      .+++...+  .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++...... .......++..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC-CccccccCCCC
Confidence            99997766  7999999999999999999999999999999999999999999999999988654332 22334567889


Q ss_pred             CCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCC
Q 016991          175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK  250 (379)
Q Consensus       175 y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~  250 (379)
                      |+|||++.+..+ +.++||||+||++|+|++|+.||.....    ..+...+.......|..+++.+.++|.+||+.||.
T Consensus       160 y~~PE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  238 (277)
T cd05577         160 YMAPEVLQGEVY-DFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPE  238 (277)
T ss_pred             cCCHHHhcCCCC-CchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChh
Confidence            999999877664 5899999999999999999999976543    23333344445566777899999999999999999


Q ss_pred             CCC-----ChHhHhcCccccc
Q 016991          251 TRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       251 ~R~-----s~~~il~hp~f~~  266 (379)
                      +||     ++.+++.||||..
T Consensus       239 ~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         239 KRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             HccCCCcccHHHHHhChhhhc
Confidence            999     8888999999964

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=8.2e-45  Score=333.54  Aligned_cols=253  Identities=32%  Similarity=0.589  Sum_probs=221.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA--SRTKVYII   87 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~~~~~~lv   87 (379)
                      +|++.+.||.|+||.||+|.+..+|..||+|++...... ....+.+..|+.+++.++||||+++++++.  .....|++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence            589999999999999999999999999999998764432 334567889999999999999999999775  45678999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HCCceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           88 LEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCH-----SKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH-----~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      |||+++++|.+++..    ..++++..++.++.||+.||.|||     +.+++|+||+|+||+++.++.+||+|||++..
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~  159 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI  159 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence            999999999999865    367899999999999999999999     89999999999999999999999999999887


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhH
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGA  237 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~  237 (379)
                      ............|++.|+|||++.+..+ +.++|+||||+++++|++|..||...+.....+.+..... ..|..++..+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (265)
T cd08217         160 LGHDSSFAKTYVGTPYYMSPEQLNHMSY-DEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSEL  238 (265)
T ss_pred             ccCCcccccccccCCCccChhhhcCCCC-CchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHH
Confidence            6554333445678999999999977664 4889999999999999999999998887777777766554 4566789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .+++.+||+.+|++|||+.++++|||+
T Consensus       239 ~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         239 NEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            999999999999999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=7.2e-45  Score=340.08  Aligned_cols=256  Identities=26%  Similarity=0.417  Sum_probs=213.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC---
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR---   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~---   81 (379)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++....    .....+.+|+.+++.+ +||||+++++++...   
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~   94 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKL   94 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecccc
Confidence            34678999999999999999999999999999999986532    1235678899999988 799999999998643   


Q ss_pred             --CeEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           82 --TKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                        +..|+||||++|++|.+++..    ...+++..++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||+
T Consensus        95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~  174 (291)
T cd06639          95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGV  174 (291)
T ss_pred             CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeeccc
Confidence              468999999999999988753    45789999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCC----CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cC
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRG----YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FS  228 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~  228 (379)
                      +.............+|+..|+|||++....    ..+.++||||+||++|+|++|++||...+.......+....   ..
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  254 (291)
T cd06639         175 SAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL  254 (291)
T ss_pred             chhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence            876543322233457889999999985432    13589999999999999999999998766544444443332   22


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      .|...+..+.+||.+||+.||.+||++.+|++||||+
T Consensus       255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            3455778899999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.2e-45  Score=355.89  Aligned_cols=247  Identities=25%  Similarity=0.407  Sum_probs=200.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ..+|++.+.||+|+||.||+|.+..++..||+|+..+.         ....|+.+++.++||||+++++++......|+|
T Consensus        65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence            34799999999999999999999999999999975432         234689999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ...
T Consensus       136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~  213 (357)
T PHA03209        136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-PAF  213 (357)
T ss_pred             EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC-ccc
Confidence            99995 578887765 457999999999999999999999999999999999999999999999999998754332 223


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChH----------HHHHHHHhcc---cCCC--
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLP----------TLYKKINAAE---FSCP--  230 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~~----------~~~~~i~~~~---~~~p--  230 (379)
                      ....||+.|+|||++.+..+ +.++||||+||++|+|+++ ..+|......          .+.+.+....   ..+|  
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  292 (357)
T PHA03209        214 LGLAGTVETNAPEVLARDKY-NSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRD  292 (357)
T ss_pred             ccccccccccCCeecCCCCC-CchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCC
Confidence            35679999999999987766 5899999999999999985 4444432211          1111111100   0011  


Q ss_pred             ----------------------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          231 ----------------------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       231 ----------------------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                                  ..++.++.+||.+||+.||.+|||+.|+++||||+.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        293 PGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                        124667888999999999999999999999999974

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=6.3e-45  Score=333.71  Aligned_cols=249  Identities=31%  Similarity=0.548  Sum_probs=217.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|+||.||++.+..++..||+|.+.....  ....+.+.+|+.+++.++||||+++++.+...+.+|++||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME   78 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            58999999999999999999999999999999865432  2345778899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+++++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...........
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  158 (255)
T cd08219          79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC  158 (255)
T ss_pred             eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccc
Confidence            99999999988653  4589999999999999999999999999999999999999999999999999876544333334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~  246 (379)
                      ...|++.|+|||++.+..+ +.++|+||+|+++|+|++|..||...+.......+..... ..|..++..+.+||.+||+
T Consensus       159 ~~~~~~~~~aPE~~~~~~~-~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  237 (255)
T cd08219         159 TYVGTPYYVPPEIWENMPY-NNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFK  237 (255)
T ss_pred             cccCCccccCHHHHccCCc-CchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHh
Confidence            5678999999999977665 5899999999999999999999998887766666655544 3566789999999999999


Q ss_pred             CCCCCCCChHhHhcC
Q 016991          247 PNPKTRIRIEGIRKH  261 (379)
Q Consensus       247 ~dP~~R~s~~~il~h  261 (379)
                      .||.+|||+.+++.-
T Consensus       238 ~~P~~Rp~~~~il~~  252 (255)
T cd08219         238 RNPRSRPSATTILSR  252 (255)
T ss_pred             CCcccCCCHHHHhhc
Confidence            999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=6.5e-45  Score=336.80  Aligned_cols=255  Identities=30%  Similarity=0.474  Sum_probs=214.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc-------chHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-------KHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-------~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      +|.+.+.||.|+||.||+|.+..+|+.||+|.+......       .....+.+.+|+.+++.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            689999999999999999999999999999988643211       1123456889999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ..++||||++|++|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++......
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999998754331


Q ss_pred             --cccccccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCC----CC
Q 016991          163 --VELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPF----WF  233 (379)
Q Consensus       163 --~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~----~~  233 (379)
                        ........|+..|+|||++.... ..+.++|+||||++++++++|..||...+.......+...  ....|.    .+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence              11223456889999999987654 3458999999999999999999999766554333333222  222332    35


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +.++.++|.+||.++|.+|||++++++||||
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            8899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-45  Score=341.01  Aligned_cols=255  Identities=32%  Similarity=0.493  Sum_probs=215.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.++|+||+++++++...+..|++|
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence            479999999999999999999999999999998865432 2334577899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-ccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-LLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-~~~  167 (379)
                      ||++++.+.....+...+++.++..++.||+.||.|||+.|++||||+|+||+++.++.+||+|||++........ ...
T Consensus        80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (288)
T cd07833          80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLT  159 (288)
T ss_pred             ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccccc
Confidence            9999877776666667799999999999999999999999999999999999999999999999999876655332 334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------------c
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------------------E  226 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------------------~  226 (379)
                      ...++..|+|||++.+....+.++||||+|+++|+|++|.+||.+.+.......+...                     .
T Consensus       160 ~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (288)
T cd07833         160 DYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA  239 (288)
T ss_pred             CcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccc
Confidence            5678899999999987745568999999999999999999999876544332221110                     0


Q ss_pred             -----------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          227 -----------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       227 -----------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                 ...|..+++++.+||.+||..||++|||++++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                       01233458899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=4e-45  Score=334.60  Aligned_cols=250  Identities=28%  Similarity=0.469  Sum_probs=216.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||.|+||.||+|.+..++..||+|.+....     ..+.+.+|+.+++.++||||+++++.+......|+++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~   77 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM   77 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence            67999999999999999999999989999999986542     1578999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++...........
T Consensus        78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  157 (256)
T cd06612          78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRN  157 (256)
T ss_pred             ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccc
Confidence            99999999999875 45789999999999999999999999999999999999999999999999999876554332334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---cccCCCCCCCHhHHHHHHHc
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA---AEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~~  244 (379)
                      ...|+..|+|||++.+..+ +.++||||+||++|+|++|+.||...+.......+..   .....+..++.++.++|.+|
T Consensus       158 ~~~~~~~y~~PE~~~~~~~-~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd06612         158 TVIGTPFWMAPEVIQEIGY-NNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC  236 (256)
T ss_pred             cccCCccccCHHHHhcCCC-CchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence            4558899999999977765 4899999999999999999999987655433322222   12233445788999999999


Q ss_pred             cCCCCCCCCChHhHhcCccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f  264 (379)
                      |+.||.+|||+.++++||||
T Consensus       237 l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         237 LVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.7e-45  Score=341.96  Aligned_cols=256  Identities=26%  Similarity=0.432  Sum_probs=216.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||+|+||.||+|.+..+|..||+|.+....  .......+.+|+.+++.++||||+++++.+...+..|+||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM   78 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence            47999999999999999999999999999999886532  2233467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           89 EFVTGGELFDKIVHQ---GRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        89 E~~~gg~L~~~l~~~---~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      ||++|++|..++...   ..+++..+..++.||+.||.|||+ .||+||||||+||+++.++.++|+|||++.....  .
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--~  156 (286)
T cd06622          79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA--S  156 (286)
T ss_pred             eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC--C
Confidence            999999998888663   379999999999999999999997 5999999999999999999999999999865432  2


Q ss_pred             cccccccCCCCCchhhhccCCC-----CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---HHh-cccCCCCCCCH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGY-----DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK---INA-AEFSCPFWFST  235 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~---i~~-~~~~~p~~~s~  235 (379)
                      .....+|++.|+|||.+.+...     .+.++|+||+||++|+|++|..||...+.......   +.. .....|..+++
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd06622         157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSD  236 (286)
T ss_pred             ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCH
Confidence            2345568889999999854432     25789999999999999999999976554443332   222 23456667899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ++.++|.+||+.+|.+||++++++.||||....
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         237 DAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            999999999999999999999999999997643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=9.2e-45  Score=333.76  Aligned_cols=254  Identities=32%  Similarity=0.576  Sum_probs=217.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|.+.+.||+|+||.||+|.+..++..||+|++...... ....+.+.+|+.+++.++|+||+++++.....+..++|+|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            699999999999999999999999999999999765433 3456889999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc----
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL----  165 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~----  165 (379)
                      |+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++.........    
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~  159 (264)
T cd06626          80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEE  159 (264)
T ss_pred             cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccccc
Confidence            9999999999988778999999999999999999999999999999999999999999999999998765442221    


Q ss_pred             ccccccCCCCCchhhhccCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-hcccCCCCCC--CHhHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRG--YDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKIN-AAEFSCPFWF--STGATS  239 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~--~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~-~~~~~~p~~~--s~~~~~  239 (379)
                      .....+++.|+|||++.+..  ..+.++||||+|+++++|++|+.||...+.. .....+. ......|.+.  ++.+.+
T Consensus       160 ~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (264)
T cd06626         160 VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKD  239 (264)
T ss_pred             ccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHH
Confidence            22456889999999997654  2358999999999999999999999765322 2222222 2234455554  899999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +|.+||+.+|.+|||+++++.|||+
T Consensus       240 li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         240 FLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-45  Score=337.10  Aligned_cols=253  Identities=28%  Similarity=0.441  Sum_probs=212.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC----
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT----   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~----   82 (379)
                      .++|++.+.||.|++|.||+|.+..+++.+++|++.....    ..+.+.+|+.+++.+ +||||+++++++....    
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            4799999999999999999999999999999999865432    336788999999998 6999999999996544    


Q ss_pred             --eEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           83 --KVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                        ..|+||||+++++|.+++..    +..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~  160 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS  160 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence              58999999999999988865    357899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSC  229 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~  229 (379)
                      ..............|++.|+|||++...    ...+.++|||||||++|+|++|..||...+.......+....   ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  240 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKS  240 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCc
Confidence            7554433334456789999999998542    223578999999999999999999997665544444443332   222


Q ss_pred             CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +..++.++.+||.+||..||.+|||+.++++|||+
T Consensus       241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         241 PENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            33467899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=3.4e-45  Score=340.81  Aligned_cols=253  Identities=32%  Similarity=0.470  Sum_probs=210.8

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|++.+.||.|++|.||+|.+..+|..||||.+...... ......+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence            489999999999999999999999999999988654322 2233568899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+. ++|..++..  ...+++..+..++.|++.||+|||+.|++||||+|+||+++.++.+||+|||++...........
T Consensus        80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  158 (284)
T cd07860          80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT  158 (284)
T ss_pred             ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccc
Confidence            995 578888765  35689999999999999999999999999999999999999999999999999875544333334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cc-----------------cCC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA-AE-----------------FSC  229 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~-~~-----------------~~~  229 (379)
                      ...+++.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.. ..                 ..+
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence            456788999999987666556889999999999999999999977654332222111 00                 011


Q ss_pred             -----------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          230 -----------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       230 -----------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                 ...++++++++|.+||+.||.+|||++++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                       12368889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.6e-45  Score=360.90  Aligned_cols=248  Identities=20%  Similarity=0.303  Sum_probs=203.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ..+|.+.+.||+|+||.||+|.+..+++.||||....         ..+.+|+.+|+.++|||||++++++...+..++|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv  238 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV  238 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence            4479999999999999999999999999999995321         2356899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc--c
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--E  164 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~--~  164 (379)
                      ||++. ++|.+++... ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .
T Consensus       239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~  317 (461)
T PHA03211        239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP  317 (461)
T ss_pred             EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence            99994 6888888654 469999999999999999999999999999999999999999999999999987653321  1


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC--------ChHHHHHHHHhccc---------
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET--------DLPTLYKKINAAEF---------  227 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~--------~~~~~~~~i~~~~~---------  227 (379)
                      .....+||+.|+|||++.+..+ +.++|||||||+||+|++|..|+...        ....+.+.+.....         
T Consensus       318 ~~~~~~GT~~Y~APE~~~~~~~-~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~  396 (461)
T PHA03211        318 FHYGIAGTVDTNAPEVLAGDPY-TPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA  396 (461)
T ss_pred             cccccCCCcCCcCHHHHcCCCC-CchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence            2234579999999999987766 48999999999999999987654221        11223333322211         


Q ss_pred             --------------------CCCC-----CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          228 --------------------SCPF-----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       228 --------------------~~p~-----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                          ..+.     .++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                0111     24668999999999999999999999999999974

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=8.2e-45  Score=340.06  Aligned_cols=255  Identities=31%  Similarity=0.445  Sum_probs=209.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe----
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTK----   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~----   83 (379)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.+. ||||+++++++...+.    
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD-EEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc-ccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            479999999999999999999999999999998865432 2223456788999999995 6999999999887665    


Q ss_pred             -EEEEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccc
Q 016991           84 -VYIILEFVTGGELFDKIVHQ-----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLS  156 (379)
Q Consensus        84 -~~lv~E~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~  156 (379)
                       .|++|||+++ +|.+++...     ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus        80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~  158 (295)
T cd07837          80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG  158 (295)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence             8999999975 788887643     35799999999999999999999999999999999999998 889999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-----c----
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-----F----  227 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-----~----  227 (379)
                      ..............+++.|+|||++.+....+.++||||+|+++|+|++|.+||.+.+.......+....     .    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (295)
T cd07837         159 RAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG  238 (295)
T ss_pred             eecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence            7544332333344678899999998765545689999999999999999999998776554443332110     0    


Q ss_pred             --------CCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          228 --------SCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       228 --------~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                              ..|           +.+++++.+||.+||++||.+||++++++.||||+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             hhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                    001           23688899999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=8.6e-45  Score=339.59  Aligned_cols=254  Identities=29%  Similarity=0.451  Sum_probs=206.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|.+.+.||+|+||.||+|.+..+|..||+|++.......  ....+.+|+.+++.++|+||+++++++...+..|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   81 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV   81 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence            367999999999999999999999999999999986543222  224567899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      +||+. ++|.+.+.. ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++..........
T Consensus        82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  160 (291)
T cd07870          82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY  160 (291)
T ss_pred             Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC
Confidence            99995 677766654 3568889999999999999999999999999999999999999999999999987544333333


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHh-cc---------------c--
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINA-AE---------------F--  227 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~-~~---------------~--  227 (379)
                      ....+++.|+|||++.+....+.++||||+||++|+|++|..||...+.. +....+.. ..               +  
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (291)
T cd07870         161 SSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKP  240 (291)
T ss_pred             CCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccc
Confidence            45567899999999876544458899999999999999999999765432 11111100 00               0  


Q ss_pred             -----CCC---------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          228 -----SCP---------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       228 -----~~p---------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                           ..+         ...++++.+++.+||..||++|||+.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         241 EWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence                 000         0125688999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=4.1e-45  Score=342.09  Aligned_cols=256  Identities=32%  Similarity=0.459  Sum_probs=214.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TKV   84 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~~   84 (379)
                      .+++|++.+.||.|+||.||+|.+..++..+|+|.+...... ......+.+|+.+++.++||||+++++++...  ...
T Consensus         3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (293)
T cd07843           3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKI   81 (293)
T ss_pred             chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcE
Confidence            457899999999999999999999999999999999754432 22334677899999999999999999998877  899


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+|+||+. ++|.+.+.... .+++..++.++.||+.||.|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus        82 ~lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~  160 (293)
T cd07843          82 YMVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL  160 (293)
T ss_pred             EEEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence            99999996 48888886643 58999999999999999999999999999999999999999999999999987655433


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc------------------
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA------------------  225 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~------------------  225 (379)
                      .......+++.|+|||++.+....+.++|+||+|+++|+|++|.+||...+......++...                  
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (293)
T cd07843         161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA  240 (293)
T ss_pred             cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence            33345567889999999876555568999999999999999999999877655444332210                  


Q ss_pred             -------------ccCCCCC-CCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          226 -------------EFSCPFW-FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       226 -------------~~~~p~~-~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                   ...+|.. +++.+.++|.+||+.||++|||+.|++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                         0112222 58889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=8.1e-45  Score=338.07  Aligned_cols=252  Identities=33%  Similarity=0.514  Sum_probs=212.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|++|.||+|.+..+|..||||++......  ...+.+.+|+.+++.++||||+++++++...+..|+|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence            589999999999999999999999999999998764322  223567789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           90 FVTGGELFDKIVHQ---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        90 ~~~gg~L~~~l~~~---~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |+++ +|.+++...   ..+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||++..........
T Consensus        79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~  157 (284)
T cd07836          79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF  157 (284)
T ss_pred             cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence            9975 888887654   358999999999999999999999999999999999999999999999999987554432333


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc------------------cC
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE------------------FS  228 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~------------------~~  228 (379)
                      ....+++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+....                  ..
T Consensus       158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd07836         158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPT  237 (284)
T ss_pred             ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccc
Confidence            455678899999998765555689999999999999999999998877655444332110                  00


Q ss_pred             -----------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 -----------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 -----------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                 ..+..++.+.++|.+||+.||.+||++.++++||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         238 FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                       112457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.5e-45  Score=335.25  Aligned_cols=249  Identities=34%  Similarity=0.635  Sum_probs=221.3

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||.|+||.||++.+..+|+.||+|++...........+.+.+|+.+++.++||||+++++.+......|+++||++|++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999999999999999776554445567899999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--------cccc
Q 016991           97 FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--------LLHT  168 (379)
Q Consensus        97 ~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--------~~~~  168 (379)
                      .+++.+.+.+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++........        ....
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            99998878999999999999999999999999999999999999999999999999999875433211        2234


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCC--CHhHHHHHHHccC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF--STGATSLIHKILD  246 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~--s~~~~~li~~~L~  246 (379)
                      ..++..|+|||.+.+..+ +.++|+||||+++|+|++|..||...+.......+.......|...  ++.+.+++.+||+
T Consensus       161 ~~~~~~~~~Pe~~~~~~~-~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (265)
T cd05579         161 IVGTPDYIAPEVILGQGH-SKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLV  239 (265)
T ss_pred             cccCccccCHHHhcCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhc
Confidence            568889999999977664 5899999999999999999999998888787777777666666665  9999999999999


Q ss_pred             CCCCCCCCh---HhHhcCccccc
Q 016991          247 PNPKTRIRI---EGIRKHPWFRK  266 (379)
Q Consensus       247 ~dP~~R~s~---~~il~hp~f~~  266 (379)
                      .+|.+|||+   .++++||||+.
T Consensus       240 ~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         240 PDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             CCHhhcCCCccHHHHhcCccccC
Confidence            999999999   99999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-46  Score=308.98  Aligned_cols=257  Identities=35%  Similarity=0.516  Sum_probs=221.6

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|.-.++||+|+||+||+|++.++++.||+|.++.+.- ++.......+||.+++.++|.|||+++++..++..+-+|+
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence            467788999999999999999999999999999987542 3334567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |||. .+|..+... ++.++...++.++.|++.||.+||++++.|||+||.|+|++.+|.+|++|||+++.+..+..-.+
T Consensus        81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcys  159 (292)
T KOG0662|consen   81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS  159 (292)
T ss_pred             HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence            9994 467666644 57899999999999999999999999999999999999999999999999999998777666667


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc----------------c---
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE----------------F---  227 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~----------------~---  227 (379)
                      ..+-|.+|++|.++.+...++...|+||.|||+.|+.. |++.|++.+.....++|-..-                +   
T Consensus       160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y  239 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY  239 (292)
T ss_pred             ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence            77889999999999998888899999999999999984 999999998877766663210                0   


Q ss_pred             -CCC---------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          228 -SCP---------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       228 -~~p---------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                       .+|         +.++...+||++++|.-+|.+|++++.+++||||...
T Consensus       240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence             011         1135567899999999999999999999999999653

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=4.3e-45  Score=345.57  Aligned_cols=245  Identities=26%  Similarity=0.440  Sum_probs=192.8

Q ss_pred             eeeecccCCeEEEEEEECC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEEEEEe
Q 016991           14 GRTIGEGTFAKVRFAQNRE--TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA--SRTKVYIILE   89 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~~~~~~lv~E   89 (379)
                      +.+||+|+||+||+|.+..  ++..||+|.+....     ....+.+|+.+++.++||||+++++++.  .+...|+++|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD   80 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence            4689999999999999754  56899999886532     1245778999999999999999999885  4568899999


Q ss_pred             ccCCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE----ccCCCeEEeeeccc
Q 016991           90 FVTGGELFDKIVHQ---------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLS  156 (379)
Q Consensus        90 ~~~gg~L~~~l~~~---------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll----~~~~~lkl~DfGl~  156 (379)
                      |+. ++|.+.+...         ..+++..++.++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||++
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            985 5777776421         258899999999999999999999999999999999999    56678999999999


Q ss_pred             cCCCCCc---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH----------HHH----
Q 016991          157 ALPQQGV---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP----------TLY----  219 (379)
Q Consensus       157 ~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----------~~~----  219 (379)
                      .......   ......+||+.|+|||++.+....+.++||||+||++|+|++|.+||......          ...    
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~  239 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS  239 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence            7654321   12345578999999999977665578999999999999999999999643211          000    


Q ss_pred             ----------HHHH-------------hccc----------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          220 ----------KKIN-------------AAEF----------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       220 ----------~~i~-------------~~~~----------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                ..+.             ...+          ..+...+..+.+||.+||+.||.+|||++|+++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                      0000             0000          0011235678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1e-44  Score=348.79  Aligned_cols=261  Identities=30%  Similarity=0.474  Sum_probs=213.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----   81 (379)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++.+... .......+.+|+.+++.++||||+++++++...     
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence            46789999999999999999999999999999999865432 233446678899999999999999999988643     


Q ss_pred             -CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 -TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 -~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                       ...|+||||+. ++|.+.+...  +++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus        93 ~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  169 (353)
T cd07850          93 FQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  169 (353)
T ss_pred             cCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence             35799999995 5788877543  8999999999999999999999999999999999999999999999999987554


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------------  225 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------------  225 (379)
                      .. .......|++.|+|||++.+..+. .++|||||||++|+|++|+.||...+....+..+...               
T Consensus       170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~-~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T cd07850         170 TS-FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT  247 (353)
T ss_pred             CC-CCCCCCcccccccCHHHHhCCCCC-CchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence            32 223345688999999999887764 8999999999999999999999876644333332110               


Q ss_pred             -------cc--------------CC-------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCCCC
Q 016991          226 -------EF--------------SC-------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKC  273 (379)
Q Consensus       226 -------~~--------------~~-------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~~~  273 (379)
                             ..              ..       +...++.++++|.+||+.||++|||+.+++.||||+..+.+..+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~~  323 (353)
T cd07850         248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSEV  323 (353)
T ss_pred             hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCccC
Confidence                   00              00       11235678999999999999999999999999999876665443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=1.6e-44  Score=330.71  Aligned_cols=252  Identities=29%  Similarity=0.502  Sum_probs=219.3

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+.+++.++||||+++++.+...+..++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence            6999999999999999999999999999999997654333 345789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCCcccc
Q 016991           90 FVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        90 ~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |++|++|.+++...  ..+++..+..++.|++.||+|||++|++||||+|+||+++.++ .++|+|||++...... ...
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~-~~~  158 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK-SKA  158 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC-ccc
Confidence            99999999999764  3589999999999999999999999999999999999998655 5899999998765432 122


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHcc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L  245 (379)
                      ....|++.|+|||.+.+..+ +.++|+||+|+++|+|++|..||...+.......+.... ..+|..+++++.+++.+||
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  237 (256)
T cd08220         159 YTVVGTPCYISPELCEGKPY-NQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSML  237 (256)
T ss_pred             cccccCCcccCchhccCCCC-CcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHc
Confidence            34568899999999976554 589999999999999999999998887766666655443 3466678999999999999


Q ss_pred             CCCCCCCCChHhHhcCccc
Q 016991          246 DPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f  264 (379)
                      ..||.+|||+.++++||||
T Consensus       238 ~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         238 NLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             cCChhhCCCHHHHhhCCCC
Confidence            9999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.2e-44  Score=336.50  Aligned_cols=249  Identities=33%  Similarity=0.532  Sum_probs=205.5

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--CeEEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASR--TKVYII   87 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~--~~~~lv   87 (379)
                      |++.+.||+|+||.||+|.+..+++.||+|.+.+...... . ....+|+.+++++. ||||+++++++.+.  +..++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-Q-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV   78 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-h-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence            7889999999999999999999999999999865432221 1 23457888888885 99999999999887  899999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+. ++|.+.+... ..+++..++.++.||+.||.|||+.|++||||+|+||+++. +.+||+|||++....... ..
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-~~  155 (282)
T cd07831          79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-PY  155 (282)
T ss_pred             EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC-Cc
Confidence            99996 5788877653 57899999999999999999999999999999999999999 999999999987654322 22


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh------------------cccC
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA------------------AEFS  228 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~------------------~~~~  228 (379)
                      ....+++.|+|||++......+.++||||+||++|+|++|.+||.+.+.......+..                  ..+.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd07831         156 TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN  235 (282)
T ss_pred             CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccccc
Confidence            3456889999999876656667899999999999999999999987765443333321                  0111


Q ss_pred             CC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 CP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 ~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +|           ..+|.++.++|.+||++||.+|||++++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         236 FPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             CcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            11           2367899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.4e-44  Score=334.05  Aligned_cols=250  Identities=20%  Similarity=0.294  Sum_probs=211.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ..+|++.+.||+|+||.||+|.+.   ..+..||+|.+....  .......+.+|+.+++.++||||+++++++..++..
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM   81 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence            457999999999999999999865   456799999987643  223346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++|+|.+++... +.+++..++.++.||+.||+|||++|++||||||+||+++.++.++++|||.+.......
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence            9999999999999998764 578999999999999999999999999999999999999999999999999876433221


Q ss_pred             c-cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHH
Q 016991          164 E-LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSL  240 (379)
Q Consensus       164 ~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~l  240 (379)
                      . ......++..|+|||++.+..+ +.++||||+||++|++++ |..||.+.+.......+... ..+.|..++..+.++
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  240 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHF-SSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQL  240 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCc-cchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence            1 1112335678999999977665 589999999999999875 99999888777666666544 345667789999999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      +.+|++.+|.+||++++|++
T Consensus       241 i~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         241 MLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHcCCCchhCCCHHHHHH
Confidence            99999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-45  Score=336.76  Aligned_cols=256  Identities=28%  Similarity=0.487  Sum_probs=218.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .|++.+.||.|+||.||+|.+..+++.||+|.+.....  ....+.+.+|+.+++.++   |||++++++++......|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            58889999999999999999999999999999865432  223467889999999987   9999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      +|||++|++|.+++.. +.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++..........
T Consensus        80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence            9999999999998865 589999999999999999999999999999999999999999999999999987665443333


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCC-CCHhHHHHHHHc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFW-FSTGATSLIHKI  244 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~-~s~~~~~li~~~  244 (379)
                      ....|+..|+|||.+.+....+.++|+||+||++|+|++|..||...+.......+.... ..++.. ++.++.+++.+|
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC  238 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHH
Confidence            455789999999998765555689999999999999999999998776554443333222 223332 788999999999


Q ss_pred             cCCCCCCCCChHhHhcCccccccC
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |+.||.+||++.+++.||||+...
T Consensus       239 l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         239 LDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cCCCcccCcCHHHHhhChHhhccc
Confidence            999999999999999999997654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=9.5e-45  Score=337.62  Aligned_cols=254  Identities=26%  Similarity=0.392  Sum_probs=210.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEE------
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLA------   79 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~------   79 (379)
                      ..+.|++.+.||.|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+ +||||+++++++.      
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence            4589999999999999999999999999999999986532    2335688899999988 6999999999985      


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      .....|++|||+.+|+|.+++...  ..+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++.
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence            356899999999999999988753  458889999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-C-CCC
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-S-CPF  231 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~-~p~  231 (379)
                      .............|++.|+|||++...    ...+.++|+|||||++|+|++|..||...........+..... . .+.
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  249 (282)
T cd06636         170 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSK  249 (282)
T ss_pred             hhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCccc
Confidence            554332333456789999999998531    2234789999999999999999999976654433332322211 1 223


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .++.++.+||.+||+.||.+|||+.+|++||||
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            478999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1e-44  Score=336.80  Aligned_cols=256  Identities=26%  Similarity=0.413  Sum_probs=219.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .+.|+..+.||.|+||.||.|.+..++..||||++.....  ......+.+|+.+++.++||||+++++++.+....|+|
T Consensus         3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06640           3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII   80 (277)
T ss_pred             HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            3578899999999999999999999999999999875432  23457789999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |||++|++|.+++.. +++++.++..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...........
T Consensus        81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06640          81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence            999999999998865 6789999999999999999999999999999999999999999999999999865544322233


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~  246 (379)
                      ...++..|+|||++.+..+ +.++|+||+||++|+|++|..||...+.......+... ....+..++.++.++|.+||+
T Consensus       160 ~~~~~~~y~apE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06640         160 TFVGTPFWMAPEVIQQSAY-DSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLN  238 (277)
T ss_pred             cccCcccccCHhHhccCCC-ccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcc
Confidence            4568889999999976655 58999999999999999999999876655444443322 223444578899999999999


Q ss_pred             CCCCCCCChHhHhcCcccccc
Q 016991          247 PNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+|.+||++.++++||||...
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         239 KDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             cCcccCcCHHHHHhChHhhhc
Confidence            999999999999999999653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4.7e-45  Score=336.06  Aligned_cols=254  Identities=26%  Similarity=0.442  Sum_probs=217.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+.....  ....+.+.+|+.+++.++||||+++++.+...+..|+++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM   78 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence            478999999999999999999999999999999876532  234567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||.+.......  .
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~--~  156 (265)
T cd06605          79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL--A  156 (265)
T ss_pred             EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH--h
Confidence            999999999999876 789999999999999999999999 999999999999999999999999999886543321  1


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHh-cccCCCCC-CCHhHHH
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-----LPTLYKKINA-AEFSCPFW-FSTGATS  239 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~-~~~~~p~~-~s~~~~~  239 (379)
                      ....|+..|+|||.+.+..+ +.++||||+|+++|+|++|..||...+     .....+.+.. .....|.. +++++.+
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~-~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (265)
T cd06605         157 KTFVGTSSYMAPERIQGNDY-SVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQD  235 (265)
T ss_pred             hcccCChhccCHHHHcCCCC-CchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence            22678899999999977655 489999999999999999999997642     2233333322 22334444 7899999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +|.+||..||.+|||+.+++.||||+..
T Consensus       236 li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         236 FVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            9999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.1e-44  Score=337.62  Aligned_cols=254  Identities=27%  Similarity=0.433  Sum_probs=210.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEE-----e
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLA-----S   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~-----~   80 (379)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++....    .....+.+|+.+++.+ +||||+++++++.     .
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   91 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN   91 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence            4578999999999999999999999999999999875422    1225678899999998 6999999999873     4


Q ss_pred             CCeEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           81 RTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      .+..|+||||++|++|.+.+..    ...+++..++.++.|++.||.|||+.+|+||||||+||+++.++.++|+|||++
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~  171 (286)
T cd06638          92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS  171 (286)
T ss_pred             CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence            5679999999999999987753    356889999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSC  229 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~  229 (379)
                      ..............|++.|+|||++...    ...+.++||||+||++|+|++|+.||...+.......+...   ....
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  251 (286)
T cd06638         172 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQ  251 (286)
T ss_pred             eecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccC
Confidence            7654332233455789999999998532    22357999999999999999999999876654433333222   1223


Q ss_pred             CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      |..++..+.+||.+||+.||.+|||+.++++||||
T Consensus       252 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         252 PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            45568899999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=1.7e-44  Score=339.99  Aligned_cols=257  Identities=25%  Similarity=0.394  Sum_probs=207.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT---   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~---   82 (379)
                      ..+++|++.+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+.+++.++||||+++++++....   
T Consensus         9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   87 (310)
T cd07865           9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPY   87 (310)
T ss_pred             chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence            4578999999999999999999999999999999998654322 222345678999999999999999999886543   


Q ss_pred             -----eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           83 -----KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        83 -----~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                           ..|+||||+. ++|.+.+... ..+++.+++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++
T Consensus        88 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~  166 (310)
T cd07865          88 NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLA  166 (310)
T ss_pred             cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence                 4699999995 5787777654 37899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCc----ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc------
Q 016991          157 ALPQQGV----ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE------  226 (379)
Q Consensus       157 ~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~------  226 (379)
                      .......    .......++..|+|||++.+....+.++||||+|+++|+|++|.+||.+.+.......+....      
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (310)
T cd07865         167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE  246 (310)
T ss_pred             ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            7554321    122345678899999998765544689999999999999999999998766543332221110      


Q ss_pred             -------------cCC-------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          227 -------------FSC-------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       227 -------------~~~-------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                   ...             +...++.+.+||.+||..||.+|||++++++||||
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                         001             11236778899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=6.3e-45  Score=341.25  Aligned_cols=257  Identities=27%  Similarity=0.472  Sum_probs=218.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +.|.....||+|+||.||++.+..++..||||.+....   ....+.+.+|+.+++.++||||+++++.+...+..|+||
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~   98 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM   98 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence            45666788999999999999999999999999886532   234467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||+++++|.+++.. +.+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++............
T Consensus        99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~  177 (292)
T cd06658          99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKS  177 (292)
T ss_pred             eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCce
Confidence            99999999887754 67999999999999999999999999999999999999999999999999998755443333345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHHHHcc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L  245 (379)
                      .+|++.|+|||.+.+..+ +.++|+||+||++|+|++|..||...+.......+...   ....+...+..+.++|.+||
T Consensus       178 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  256 (292)
T cd06658         178 LVGTPYWMAPEVISRLPY-GTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLML  256 (292)
T ss_pred             eecCccccCHHHHccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHc
Confidence            678999999999977665 48999999999999999999999877665544444332   12222347889999999999


Q ss_pred             CCCCCCCCChHhHhcCccccccCCC
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      ..||.+|||++++++||||+....+
T Consensus       257 ~~~P~~Rpt~~~il~~~~~~~~~~~  281 (292)
T cd06658         257 VREPSQRATAQELLQHPFLKLAGPP  281 (292)
T ss_pred             cCChhHCcCHHHHhhChhhhccCCc
Confidence            9999999999999999999865544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-45  Score=349.55  Aligned_cols=244  Identities=27%  Similarity=0.427  Sum_probs=211.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .+.+.+.||+|-||+||.|.... ...||+|.+.......    +.+.+|+.+|+.|+|+|||++++++..++.+|||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~----~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE  281 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSP----EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE  281 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccCh----hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence            35567899999999999999963 3589999986643332    567799999999999999999999999889999999


Q ss_pred             ccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |++.|+|.+++..  .+.+...+...++.||++|++||+++++|||||-..||||+++..+||+|||+++....+.....
T Consensus       282 ~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~  361 (468)
T KOG0197|consen  282 YMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTAS  361 (468)
T ss_pred             ecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeec
Confidence            9999999999987  45788999999999999999999999999999999999999999999999999994433211111


Q ss_pred             ccc-cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHc
Q 016991          168 TTC-GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       168 ~~~-gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~  244 (379)
                      ... -..-|.|||.+....++ .+|||||+||+|+||+| |+.|+++.+..++.+.+..+ +++.|..+|+++.+++..|
T Consensus       362 ~~~kfPIkWtAPEa~~~~~FS-~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~C  440 (468)
T KOG0197|consen  362 EGGKFPIKWTAPEALNYGKFS-SKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSC  440 (468)
T ss_pred             CCCCCCceecCHHHHhhCCcc-cccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence            111 12359999999887775 99999999999999998 99999999999888888776 5788999999999999999


Q ss_pred             cCCCCCCCCChHhHh
Q 016991          245 LDPNPKTRIRIEGIR  259 (379)
Q Consensus       245 L~~dP~~R~s~~~il  259 (379)
                      +..+|++|||++.+.
T Consensus       441 W~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  441 WHEDPEDRPTFETLR  455 (468)
T ss_pred             hhCCcccCCCHHHHH
Confidence            999999999999654

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.9e-45  Score=352.67  Aligned_cols=250  Identities=24%  Similarity=0.348  Sum_probs=206.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      .++|++++.||+|+||.||+|++..+     +..||||++.....  ....+.+.+|+.+++.+ +||||+++++.+...
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            45799999999999999999986543     45899999975432  22346788999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc----------------------------------------------------------
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ----------------------------------------------------------  103 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~----------------------------------------------------------  103 (379)
                      +..|+||||+++|+|.+++...                                                          
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            9999999999999999988642                                                          


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--ccccc
Q 016991          104 ------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTT  169 (379)
Q Consensus       104 ------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~~~~~  169 (379)
                                  .++++.++++++.||+.||.|||++||+||||||+|||++.++.+||+|||++........  ...+.
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~  274 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA  274 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence                        2467888999999999999999999999999999999999999999999999875433211  11122


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHHHHHHccC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~  246 (379)
                      .+++.|+|||++.+..+ +.++||||+||++|+|++ |..||...............  ....|...++++.++|.+||+
T Consensus       275 ~~~~~y~aPE~~~~~~~-~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  353 (374)
T cd05106         275 RLPVKWMAPESIFDCVY-TVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWN  353 (374)
T ss_pred             CCccceeCHHHhcCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence            34567999999977665 589999999999999997 99999776544333332222  345667789999999999999


Q ss_pred             CCCCCCCChHhHhc
Q 016991          247 PNPKTRIRIEGIRK  260 (379)
Q Consensus       247 ~dP~~R~s~~~il~  260 (379)
                      .||.+|||+.++++
T Consensus       354 ~dp~~RPs~~~l~~  367 (374)
T cd05106         354 LEPTERPTFSQISQ  367 (374)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999876

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=2.5e-44  Score=331.83  Aligned_cols=253  Identities=28%  Similarity=0.509  Sum_probs=215.0

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++.+.||+|+||.||+|.+..++..||||.+.............+.+|+.+++.++||||+++++++...+..|++
T Consensus         1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence            47899999999999999999999999999999988764444555566788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           88 LEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +||+++++|.+++..    ...+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence            999999999888753    3458999999999999999999999999999999999999999999999999987655433


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcccC-C-CCCCCHhHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL--PTLYKKINAAEFS-C-PFWFSTGATS  239 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~-~-p~~~s~~~~~  239 (379)
                      .......|++.|+|||.+.+..+ +.++|+||+|+++|+|++|..||.....  ......+....+. . +...+..+.+
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHENGY-NFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRE  239 (267)
T ss_pred             HHHhcCCCCccccChhhhccCCC-CchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence            33345678899999999987665 4899999999999999999999965432  3444444433322 2 2357888999


Q ss_pred             HHHHccCCCCCCCCChHhHhcC
Q 016991          240 LIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +|.+||..+|++||++.++++.
T Consensus       240 li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         240 LVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHCCCCcccCcCHHHHHHH
Confidence            9999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=8e-48  Score=341.75  Aligned_cols=253  Identities=25%  Similarity=0.445  Sum_probs=222.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +-|.++++||+|+||.||+|.++++|..+|||.+..+.     ..+.+.+||.+|++.+.|++|++|+.+.....+++||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeeh
Confidence            34788999999999999999999999999999875533     4578889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |||-.|++.+.++. +++++|.++..+++.-+.||+|||...-+|||||..|||++.+|+.||+|||.+.........-+
T Consensus       108 EYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN  187 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN  187 (502)
T ss_pred             hhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC
Confidence            99999999998864 56899999999999999999999999999999999999999999999999999876655445557


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHHHHHHc
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~  244 (379)
                      +..|||.|||||++..-+|+ .++||||||++..||..|++||.+-......-.|-...   +.-|...|.++.||+++|
T Consensus       188 TVIGTPFWMAPEVI~EIGY~-~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~C  266 (502)
T KOG0574|consen  188 TVIGTPFWMAPEVIEEIGYD-TKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSC  266 (502)
T ss_pred             ccccCcccccHHHHHHhccc-hhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHH
Confidence            88999999999999999997 89999999999999999999997655443333333222   233555789999999999


Q ss_pred             cCCCCCCCCChHhHhcCcccccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      |..+|++|-|+.++++|||++..
T Consensus       267 LiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  267 LIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             hcCCHHHHHHHHHHhhhhhhcCC
Confidence            99999999999999999999764

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.1e-44  Score=330.10  Aligned_cols=253  Identities=30%  Similarity=0.578  Sum_probs=218.0

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|+||.||++.+..+|..||+|.+....... ...+.+.+|+.+++.++||||+++++.+...+..|+++|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence            6899999999999999999999999999999987654322 234678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC-eEEeeeccccCCCCCcccc
Q 016991           90 FVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~-lkl~DfGl~~~~~~~~~~~  166 (379)
                      |+++++|.+++....  .+++..+..++.|++.||.|||+.|++|+||||+||++++++. ++|+|||.+..........
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~  159 (257)
T cd08225          80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA  159 (257)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc
Confidence            999999999987643  5789999999999999999999999999999999999998864 6999999987665443334


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHcc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L  245 (379)
                      ....|++.|+|||++.+..+ +.++|+||+|+++++|++|..||...+.......+..... ..+..++.++.++|.+||
T Consensus       160 ~~~~~~~~~~ape~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  238 (257)
T cd08225         160 YTCVGTPYYLSPEICQNRPY-NNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLF  238 (257)
T ss_pred             cccCCCccccCHHHHcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHh
Confidence            45568999999999876655 4899999999999999999999987776655554443332 345567899999999999


Q ss_pred             CCCCCCCCChHhHhcCccc
Q 016991          246 DPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f  264 (379)
                      ..+|++|||+.++++||||
T Consensus       239 ~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         239 KVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ccChhhCcCHHHHhhCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-44  Score=331.33  Aligned_cols=247  Identities=33%  Similarity=0.608  Sum_probs=209.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~-l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      +.||.|+||.||+|.+..+|+.||+|++.+...........+..|..+ ....+||||+++++++...+..|+++||++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            579999999999999999999999999876543322233344555544 4456899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      ++|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.....    .....|++
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~~~~~~~  157 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NKKFVGTP  157 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cccCCCCc
Confidence            99999998888899999999999999999999999999999999999999999999999998865432    23446889


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC----CCCCCHhHHHHHHHccCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC----PFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~~L~~dP  249 (379)
                      .|+|||.+.+..+ +.++||||+|+++|+|++|.+||...+.......+.......    +..+++++.++|.+||+.||
T Consensus       158 ~y~~pe~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p  236 (260)
T cd05611         158 DYLAPETILGVGD-DKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDP  236 (260)
T ss_pred             CccChhhhcCCCC-cchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCH
Confidence            9999999977664 589999999999999999999998887777666665554332    23578999999999999999


Q ss_pred             CCCCCh---HhHhcCccccc
Q 016991          250 KTRIRI---EGIRKHPWFRK  266 (379)
Q Consensus       250 ~~R~s~---~~il~hp~f~~  266 (379)
                      ++||++   +|++.||||+.
T Consensus       237 ~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         237 AKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             HHccCCCcHHHHHcChHhhc
Confidence            999954   79999999964

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=2.8e-44  Score=336.59  Aligned_cols=258  Identities=29%  Similarity=0.427  Sum_probs=211.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++.+.||+|++|.||+|.+..+|+.||+|.+...... ....+.+.+|+.+++.++||||+++++++.+....|+|
T Consensus         1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   79 (294)
T PLN00009          1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV   79 (294)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence            47899999999999999999999999999999998654322 22345688899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccccCCCCCcc
Q 016991           88 LEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |||++ ++|.+.+....  .+++..++.++.||+.||+|||++|++||||+|+||+++. ++.+||+|||++........
T Consensus        80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~  158 (294)
T PLN00009         80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR  158 (294)
T ss_pred             Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence            99995 57888776544  3578889999999999999999999999999999999985 45799999999875543323


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---c---------------
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---E---------------  226 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~---------------  226 (379)
                      ......|++.|+|||++.+....+.++||||+||++|+|++|.+||...+......++...   .               
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (294)
T PLN00009        159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK  238 (294)
T ss_pred             ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence            3344567899999999876555568999999999999999999999876654443332110   0               


Q ss_pred             cC-----------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 FS-----------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ~~-----------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ..           ....+++++.++|.+||+.||.+||++.++++||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence            00           123468889999999999999999999999999999753

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=2.1e-44  Score=334.72  Aligned_cols=255  Identities=25%  Similarity=0.411  Sum_probs=219.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      -|++.+.||.|+||.||+|.+..++..||||++.....  ....+.+.+|+.+++.++||||+++++.+..++..|+|||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   82 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME   82 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence            47888999999999999999999999999998865432  2234678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      |+++++|.+++.. ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++.++.++|+|||++.............
T Consensus        83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06641          83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence            9999999988864 578999999999999999999999999999999999999999999999999886554432223345


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHccCCC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .|+..|+|||.+.+... +.++|+||+||++|+|++|..||...+.......+.... ...+..++.++.++|.+||+.+
T Consensus       162 ~~~~~y~~PE~~~~~~~-~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  240 (277)
T cd06641         162 VGTPFWMAPEVIKQSAY-DSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKE  240 (277)
T ss_pred             cCCccccChhhhccCCC-CchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCC
Confidence            68889999999976555 488999999999999999999998776655555554332 3355678999999999999999


Q ss_pred             CCCCCChHhHhcCccccccC
Q 016991          249 PKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       249 P~~R~s~~~il~hp~f~~~~  268 (379)
                      |.+||++.++++||||....
T Consensus       241 p~~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         241 PSFRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             hhhCcCHHHHHhCHHHhhhh
Confidence            99999999999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.5e-44  Score=336.28  Aligned_cols=252  Identities=23%  Similarity=0.377  Sum_probs=215.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCC-----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETG-----ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      .+++|++.+.||+|+||.||+|.+...+     ..||+|.+....  .......+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~   80 (283)
T cd05048           3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE   80 (283)
T ss_pred             ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence            3568999999999999999999976555     689999886432  233456789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      ...|++|||+++++|.+++...                ..+++..+..++.|++.||.|||++|++||||||+||+++.+
T Consensus        81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~  160 (283)
T cd05048          81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG  160 (283)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence            9999999999999999999764                457888999999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 016991          146 GNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI  222 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i  222 (379)
                      +.++|+|||++.......  .......+++.|+|||.+.+..+ +.++|||||||++|+|++ |..||.+.+.......+
T Consensus       161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05048         161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKF-TTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI  239 (283)
T ss_pred             CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcC-chhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            999999999987543221  12234457889999999877665 589999999999999998 99999988877777776


Q ss_pred             Hhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          223 NAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       223 ~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .... ...|..+++++.+|+.+||+.||.+||++.+|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         240 RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            5543 34567789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8e-46  Score=333.31  Aligned_cols=261  Identities=31%  Similarity=0.580  Sum_probs=238.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...+.+|++++.||+|+|++|.+++.+.|.+.||+|+++++-+...+.++.+..|-.+...- +||.+|-++.+|++.+.
T Consensus       246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr  325 (593)
T KOG0695|consen  246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR  325 (593)
T ss_pred             ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence            45577999999999999999999999999999999999998887777788888888887655 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +++|.||++||+|--+++++.++||+.++.|...|+.||.|||++||++||||..|+|+|..|++||+|+|++...-.+.
T Consensus       326 lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  326 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence            99999999999998888888999999999999999999999999999999999999999999999999999998766666


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCC--------CChHHHHHHHHhcccCCCCCCCH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE--------TDLPTLYKKINAAEFSCPFWFST  235 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~--------~~~~~~~~~i~~~~~~~p~~~s~  235 (379)
                      ...++.||||.|.|||++.+..| +..+|+|+|||+++||++|+.||+-        .+..-+++.|......+|..+|-
T Consensus       406 d~tstfcgtpnyiapeilrgeey-gfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsv  484 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRGEEY-GFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSV  484 (593)
T ss_pred             cccccccCCCcccchhhhccccc-CceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeeh
Confidence            77889999999999999988777 6999999999999999999999952        22345678888889999999999


Q ss_pred             hHHHHHHHccCCCCCCCCC------hHhHhcCccccc
Q 016991          236 GATSLIHKILDPNPKTRIR------IEGIRKHPWFRK  266 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s------~~~il~hp~f~~  266 (379)
                      .+..+++..|.+||..|..      ..++..|+||+.
T Consensus       485 kas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  485 KASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             hhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            9999999999999999974      589999999984

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2e-44  Score=336.05  Aligned_cols=257  Identities=25%  Similarity=0.396  Sum_probs=217.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||+||++.+..+|..||+|++....  .....+.+.+|+.+++.++||||+++++.+...+..|+
T Consensus         3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (284)
T cd06620           3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM   80 (284)
T ss_pred             cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence            3568999999999999999999999999999999986543  23345788999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||+++++|.+++...+.+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||++......  .
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~--~  158 (284)
T cd06620          81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS--I  158 (284)
T ss_pred             EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh--c
Confidence            99999999999999887889999999999999999999997 59999999999999999999999999987644321  2


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-----------HHHHHHHhc-ccCCCCC-
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-----------TLYKKINAA-EFSCPFW-  232 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-----------~~~~~i~~~-~~~~p~~-  232 (379)
                      ....+|+..|+|||++.+..+ +.++||||+||++|+|++|..||......           .....+... ...++.. 
T Consensus       159 ~~~~~~~~~~~aPE~~~~~~~-~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd06620         159 ADTFVGTSTYMSPERIQGGKY-TVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSD  237 (284)
T ss_pred             cCccccCcccCCHHHHccCCC-CccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchh
Confidence            234578999999999876655 48999999999999999999999764431           222222222 2223333 


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ++.++.+|+.+||++||.+|||++++++||||....
T Consensus       238 ~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         238 FPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            788999999999999999999999999999997654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3.1e-44  Score=338.13  Aligned_cols=251  Identities=21%  Similarity=0.307  Sum_probs=204.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC----------------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE----------------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN   70 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~----------------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~   70 (379)
                      .-++|++.+.||+|+||.||+|.+..                ++..||+|++....  .......+.+|+.+++.++|||
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n   80 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN   80 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence            34689999999999999999998532                34579999986543  2334467889999999999999


Q ss_pred             cceEEEEEEeCCeEEEEEeccCCCChHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHCCce
Q 016991           71 IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-------------------RLLENDCRRYFQQLIDAVAHCHSKGVY  131 (379)
Q Consensus        71 Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-------------------~l~e~~~~~~~~qil~~l~ylH~~gi~  131 (379)
                      |+++++++...+..++||||+++|+|.+++....                   .+++..+..++.||+.||.|||+.||+
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv  160 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV  160 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            9999999999999999999999999999886532                   356778899999999999999999999


Q ss_pred             eecCCCCcEEEccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh--CC
Q 016991          132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA--GY  207 (379)
Q Consensus       132 HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~--g~  207 (379)
                      ||||||+|||++.++.+||+|||++.......  .......++..|+|||++....+ +.++|||||||++|+|++  +.
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~~~~~  239 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF-TTASDVWAFGVTLWEILMLCKE  239 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC-CchhhhHHHHHHHHHHHHccCC
Confidence            99999999999999999999999987543321  11223456788999999876665 589999999999999986  67


Q ss_pred             CCCCCCChHHHHHHHHh--------cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          208 LPFGETDLPTLYKKINA--------AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       208 ~Pf~~~~~~~~~~~i~~--------~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .||.+.+.......+..        .....|..+++.+.+|+.+||+.||.+|||+.+|.+
T Consensus       240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            88887665544433221        112345567899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-46  Score=360.69  Aligned_cols=250  Identities=30%  Similarity=0.474  Sum_probs=218.9

Q ss_pred             eecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCC
Q 016991           16 TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGE   95 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~   95 (379)
                      .||+|+||+||-|+++.|....|||.+...   ..+..+-+.+||.+.+.|+|.|||++.|.+..++.+-|+||-++||+
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS  658 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS  658 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence            599999999999999999999999988543   23345679999999999999999999999999999999999999999


Q ss_pred             hHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc-cCCCeEEeeeccccCCCCCccccccccc
Q 016991           96 LFDKIVHQ-GRL--LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCG  171 (379)
Q Consensus        96 L~~~l~~~-~~l--~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~-~~~~lkl~DfGl~~~~~~~~~~~~~~~g  171 (379)
                      |.+.++.. |++  .|..+..|.+||++||.|||++.|+|||||-+|+|++ -.|.+||+|||-++....-.....+..|
T Consensus       659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTG  738 (1226)
T KOG4279|consen  659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTG  738 (1226)
T ss_pred             HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccccc
Confidence            99999875 566  7888999999999999999999999999999999997 5789999999998877665566778899


Q ss_pred             CCCCCchhhhcc-CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH--HHHHH-HHhcccCCCCCCCHhHHHHHHHccCC
Q 016991          172 TPNYVAPEVLSN-RGYDGSAADVWSCGVILFVLMAGYLPFGETDLP--TLYKK-INAAEFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       172 t~~y~aPE~l~~-~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~--~~~~~-i~~~~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      |..|||||++.. ..-+|.++|||||||++.||.+|++||.....+  .+++. +....+++|..+|.+++.||.+|+.+
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep  818 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP  818 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence            999999999953 234479999999999999999999999765433  23322 33445678889999999999999999


Q ss_pred             CCCCCCChHhHhcCccccccC
Q 016991          248 NPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       248 dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ||..||++.++|++||++...
T Consensus       819 d~~~R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  819 DPCDRPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             CcccCccHHHhccCcccccCC
Confidence            999999999999999998763

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=3.8e-44  Score=329.44  Aligned_cols=255  Identities=27%  Similarity=0.470  Sum_probs=222.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|++.+.||.|++|.||+|.+..+|+.||+|++......  .....+.+|+..+..++||||+++++++......|+++
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL   78 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence            3689999999999999999999999999999998765422  34577899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||+++++|.+++.....+++..+..++.|++.|+.|||+ .|++||||+|+||+++.++.++|+|||++...........
T Consensus        79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  158 (264)
T cd06623          79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN  158 (264)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence            999999999999888899999999999999999999999 9999999999999999999999999999876654433334


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhc-ccCCCCC-CCHhHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET---DLPTLYKKINAA-EFSCPFW-FSTGATSLIH  242 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---~~~~~~~~i~~~-~~~~p~~-~s~~~~~li~  242 (379)
                      ...++..|+|||.+.+..+ +.++|+||||+++|+|++|..||...   ......+.+... ....+.. ++..+.++|.
T Consensus       159 ~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  237 (264)
T cd06623         159 TFVGTVTYMSPERIQGESY-SYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFIS  237 (264)
T ss_pred             ceeecccccCHhhhCCCCC-CchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHH
Confidence            5678899999999877644 58999999999999999999999776   344444444432 2344555 7899999999


Q ss_pred             HccCCCCCCCCChHhHhcCccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +||.++|+.|||+.++++|||++.
T Consensus       238 ~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         238 ACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHccCChhhCCCHHHHHhCHHHHh
Confidence            999999999999999999999964

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-44  Score=328.09  Aligned_cols=247  Identities=40%  Similarity=0.725  Sum_probs=224.1

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||.|+||.||.+.+..+++.||+|++.+...........+..|+.+++.++||||+++++.+......|++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            69999999999999989999999999877665555667899999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCC
Q 016991           97 FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV  176 (379)
Q Consensus        97 ~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~  176 (379)
                      .+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..............|+..|+
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  160 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYL  160 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcccc
Confidence            99998888899999999999999999999999999999999999999999999999999876554333344567889999


Q ss_pred             chhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCCh-
Q 016991          177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI-  255 (379)
Q Consensus       177 aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~-  255 (379)
                      |||.+.+... +.++|+||||+++|+|++|..||...+.....+.+......+|..++..+.++|.+||..||..||++ 
T Consensus       161 ~Pe~~~~~~~-~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         161 APEVLLGKGY-GKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             ChHHhCCCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence            9999876554 58899999999999999999999888777777777777788888899999999999999999999999 


Q ss_pred             --HhHhcCccc
Q 016991          256 --EGIRKHPWF  264 (379)
Q Consensus       256 --~~il~hp~f  264 (379)
                        +++++||||
T Consensus       240 ~~~~l~~~~~f  250 (250)
T cd05123         240 GAEEIKAHPFF  250 (250)
T ss_pred             cHHHHHhCCCC
Confidence              999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-44  Score=335.18  Aligned_cols=252  Identities=33%  Similarity=0.457  Sum_probs=210.9

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      |++.+.||.|++|.||+|.+..+|..||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+++||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~   79 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF   79 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence            67889999999999999999999999999998765322 22335677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           91 VTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        91 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ++ ++|.+++....  .+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++............
T Consensus        80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~  158 (283)
T cd07835          80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH  158 (283)
T ss_pred             cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence            94 68999887765  7899999999999999999999999999999999999999999999999998755433333334


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc----------------------
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE----------------------  226 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~----------------------  226 (379)
                      ..+++.|+|||++.+....+.++||||+|+++|+|++|++||...+.......+....                      
T Consensus       159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07835         159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP  238 (283)
T ss_pred             cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence            4678899999998765544689999999999999999999998766543322221100                      


Q ss_pred             -------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          227 -------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       227 -------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                             ......++.++.++|.+||++||.+|||+++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence                   01123467899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-46  Score=352.02  Aligned_cols=249  Identities=33%  Similarity=0.651  Sum_probs=221.5

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      .+.||.|.||+||-|.++.+|+.||||+|++-++...+. .++++|+.||+.+.||.||.+-..|++.+.+++|||-+.|
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqe-sqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQE-SQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchH-HHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            378999999999999999999999999999988766543 7899999999999999999999999999999999999955


Q ss_pred             CChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccCCCCCcccccc
Q 016991           94 GELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        94 g~L~~~l~--~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                       +..+.|.  ..+++++...+.++.||+.||.|||-++|+|+||||||||+....   .+||||||+++...+. ..-.+
T Consensus       648 -DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-sFRrs  725 (888)
T KOG4236|consen  648 -DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-SFRRS  725 (888)
T ss_pred             -hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh-hhhhh
Confidence             5555553  357999999999999999999999999999999999999997654   6999999999987654 34567


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC--C--CCHhHHHHHHHc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF--W--FSTGATSLIHKI  244 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~--~--~s~~~~~li~~~  244 (379)
                      .+|||.|.|||++.+++|. ..-|+||.|||+|.-|+|..||....  ++..+|++..+-+|+  |  +|+++.|||..+
T Consensus       726 VVGTPAYLaPEVLrnkGyN-rSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW~eis~~AidlIn~L  802 (888)
T KOG4236|consen  726 VVGTPAYLAPEVLRNKGYN-RSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPWSEISPEAIDLINNL  802 (888)
T ss_pred             hcCCccccCHHHHhhcccc-ccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCchhhcCHHHHHHHHHH
Confidence            8899999999999999996 88999999999999999999996544  556677777776664  3  899999999999


Q ss_pred             cCCCCCCCCChHhHhcCccccccC
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |+..-.+|.|++..+.|||++...
T Consensus       803 LqVkm~kRysvdk~lsh~Wlq~yq  826 (888)
T KOG4236|consen  803 LQVKMRKRYSVDKSLSHPWLQDYQ  826 (888)
T ss_pred             HHHHHHHhcchHhhccchhhhcch
Confidence            999999999999999999998653

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-44  Score=325.27  Aligned_cols=253  Identities=30%  Similarity=0.512  Sum_probs=223.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|++|.||++.+..+++.||+|.+...... ....+.+.+|+++++.++|||++++++++.+.+..|+++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence            589999999999999999999999999999999775432 2355789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      |+++++|.+++...+.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++.............
T Consensus        80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  159 (254)
T cd06627          80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASV  159 (254)
T ss_pred             cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccccc
Confidence            99999999999888899999999999999999999999999999999999999999999999999988765544434456


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHhcccCCCCCCCHhHHHHHHHccCCC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK-INAAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~-i~~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      .|+..|+|||.+.+.. .+.++||||+|+++++|++|..||...+....... ........|..++..+.+++.+||..+
T Consensus       160 ~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  238 (254)
T cd06627         160 VGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKD  238 (254)
T ss_pred             ccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCC
Confidence            7899999999987666 45899999999999999999999977664433333 334445567778999999999999999


Q ss_pred             CCCCCChHhHhcCccc
Q 016991          249 PKTRIRIEGIRKHPWF  264 (379)
Q Consensus       249 P~~R~s~~~il~hp~f  264 (379)
                      |++|||+.+++.||||
T Consensus       239 p~~R~~~~~~l~~~~~  254 (254)
T cd06627         239 PNLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-44  Score=343.88  Aligned_cols=258  Identities=29%  Similarity=0.457  Sum_probs=209.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----T   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----~   82 (379)
                      -++|++.+.||+|+||.||+|.+..+|..||||.+....  .......+.+|+.+++.++||||+++++++...     .
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            468999999999999999999999999999999986422  223456678899999999999999999887543     3


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ..|+++||+. ++|.+.+. ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~~lv~e~~~-~~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          82 DVYIVQELME-TDLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             eEEEEehhcc-cCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            5899999995 57877664 467999999999999999999999999999999999999999999999999998754332


Q ss_pred             c---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------------
Q 016991          163 V---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA---------------  224 (379)
Q Consensus       163 ~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~---------------  224 (379)
                      .   ......+|++.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+..               
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence            1   1223457899999999986654456899999999999999999999977654322211100               


Q ss_pred             ---------ccc--C-----CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          225 ---------AEF--S-----CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       225 ---------~~~--~-----~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                               ...  .     ..+..++++.++|.+||+.||.+|||+.++++||||+....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence                     000  0     01235788999999999999999999999999999986654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=5.4e-44  Score=330.11  Aligned_cols=248  Identities=28%  Similarity=0.440  Sum_probs=208.4

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      ...||+|+||.||+|.+..++..||+|.+....   ....+.+.+|+.+++.++|+||+++++++...+..++++||+++
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   89 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPG   89 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCC
Confidence            468999999999999999999999999886532   23446789999999999999999999999999999999999999


Q ss_pred             CChHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccccCCCCCccccccc
Q 016991           94 GELFDKIVHQ-GRL--LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        94 g~L~~~l~~~-~~l--~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      ++|.+++... ..+  ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++.............
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  169 (268)
T cd06624          90 GSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETF  169 (268)
T ss_pred             CCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccC
Confidence            9999999764 455  78889999999999999999999999999999999986 6799999999987554333333445


Q ss_pred             ccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH--HHHH-HHhcccCCCCCCCHhHHHHHHHcc
Q 016991          170 CGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETDLPT--LYKK-INAAEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~--~~~~-i~~~~~~~p~~~s~~~~~li~~~L  245 (379)
                      .|++.|+|||++.+.. ..+.++|+||+|+++|+|++|..||.......  .... ........|..+++++.+++.+||
T Consensus       170 ~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  249 (268)
T cd06624         170 TGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCF  249 (268)
T ss_pred             CCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHc
Confidence            6889999999986533 24589999999999999999999997643321  1111 223334567778999999999999


Q ss_pred             CCCCCCCCChHhHhcCccc
Q 016991          246 DPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f  264 (379)
                      +.+|.+|||+.+++.||||
T Consensus       250 ~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         250 EPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             CCCchhCCCHHHHHhCCCC
Confidence            9999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=7.2e-45  Score=337.73  Aligned_cols=254  Identities=26%  Similarity=0.420  Sum_probs=216.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +.|+..+.||.|+||.||+|.+..++..||+|.+.....  ....+.+.+|+.+++.++||||+++++.+..++..|+|+
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM   81 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence            468888999999999999999999999999999865432  234567899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||+++++|.+++.. +.+++..++.++.||+.|+.|||++|++|+||+|+||+++.++.++|+|||++............
T Consensus        82 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06642          82 EYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             EccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence            99999999988754 67899999999999999999999999999999999999999999999999998765443222234


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccCC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      ..|+..|+|||++.+..+ +.++|+||+||++|+|++|..||...........+... ....+..++.++.++|.+||+.
T Consensus       161 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  239 (277)
T cd06642         161 FVGTPFWMAPEVIKQSAY-DFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLNK  239 (277)
T ss_pred             ccCcccccCHHHhCcCCC-chhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHccC
Confidence            468889999999977665 48999999999999999999999766544443333322 2234445788999999999999


Q ss_pred             CCCCCCChHhHhcCccccc
Q 016991          248 NPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       248 dP~~R~s~~~il~hp~f~~  266 (379)
                      +|.+||++.++++||||..
T Consensus       240 ~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06642         240 DPRFRPTAKELLKHKFITR  258 (277)
T ss_pred             CcccCcCHHHHHHhHHHHH
Confidence            9999999999999999975

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.8e-44  Score=345.03  Aligned_cols=258  Identities=30%  Similarity=0.442  Sum_probs=214.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----T   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----~   82 (379)
                      ..+|.+.+.||+|+||.||.|.+..+|..||||.+..... .......+.+|+.+++.++||||+++++++...     .
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN   82 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence            4689999999999999999999999999999999875432 222345677899999999999999999987643     3


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ..|+++||+. ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  161 (337)
T cd07858          83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK  161 (337)
T ss_pred             cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence            5899999995 689999988889999999999999999999999999999999999999999999999999998765443


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh------------------
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA------------------  224 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~------------------  224 (379)
                      ........|+..|+|||.+.+....+.++||||+||++|+|++|++||.+.+.......+..                  
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07858         162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA  241 (337)
T ss_pred             cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence            33344567899999999987644456899999999999999999999987654322221110                  


Q ss_pred             ------cc----c---CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          225 ------AE----F---SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       225 ------~~----~---~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                            ..    .   .....+++++.++|.+||++||++|||++++++||||...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence                  00    0   0123578999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-44  Score=339.42  Aligned_cols=254  Identities=28%  Similarity=0.436  Sum_probs=206.0

Q ss_pred             CeeeeeeecccCCeEEEEEEECC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRE--TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TKVY   85 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~~~   85 (379)
                      +|++.+.||+|+||.||+|.+..  ++..||+|.+...........+.+.+|+.+++.++||||+++++++...  ...|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            68999999999999999999988  8999999999774322233446678899999999999999999999988  8899


Q ss_pred             EEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc----CCCeEEeeeccc
Q 016991           86 IILEFVTGGELFDKIVHQ-----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS----YGNLKVSDFGLS  156 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~----~~~lkl~DfGl~  156 (379)
                      +||||+.+ +|.+.+...     ..+++..++.++.||+.||.|||+.||+||||||+||+++.    ++.+||+|||++
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            99999964 676666432     36899999999999999999999999999999999999999    899999999998


Q ss_pred             cCCCCCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH---------HHHHH--
Q 016991          157 ALPQQGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT---------LYKKI--  222 (379)
Q Consensus       157 ~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~---------~~~~i--  222 (379)
                      ........   .....++++.|+|||++.+....+.++|||||||++++|++|++||.+.+...         ....+  
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            76543221   22345788999999998765555689999999999999999999997543221         00000  


Q ss_pred             ------------------------HhcccCCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          223 ------------------------NAAEFSCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       223 ------------------------~~~~~~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                              ......++           ...+.++.++|.+||++||++|||+.++++||||
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                                    00000111           1457789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=9.1e-44  Score=325.05  Aligned_cols=253  Identities=32%  Similarity=0.574  Sum_probs=223.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|+||.||++.+..++..||+|++...... ......+.+|+++++.++|||++++++.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence            689999999999999999999999999999998764432 3345678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           90 FVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        90 ~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      |+++++|.+.+...    ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  159 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL  159 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcce
Confidence            99999999998764    67999999999999999999999999999999999999999999999999998766554334


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~  244 (379)
                      ....+|++.|+|||.+.+..+ +.++|+||+|+++++|++|..||...+.......+.... ...|..++.++.+++.+|
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (258)
T cd08215         160 AKTVVGTPYYLSPELCQNKPY-NYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSL  238 (258)
T ss_pred             ecceeeeecccChhHhccCCC-CccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            455678999999999877665 489999999999999999999998887766666554443 345667899999999999


Q ss_pred             cCCCCCCCCChHhHhcCccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f  264 (379)
                      |..+|.+|||+.++++||||
T Consensus       239 l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         239 LQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             cCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.8e-44  Score=349.99  Aligned_cols=251  Identities=24%  Similarity=0.375  Sum_probs=206.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      .++|++++.||+|+||.||+|.+     ..++..||+|++.....  ....+.+.+|+.+++.+ +||||+++++++...
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~  111 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVG  111 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence            34899999999999999999974     45677999999864332  22346788999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC---------------------------------------------------------
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG---------------------------------------------------------  104 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~---------------------------------------------------------  104 (379)
                      +..|+||||++||+|.+++....                                                         
T Consensus       112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (375)
T cd05104         112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS  191 (375)
T ss_pred             CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence            99999999999999999886432                                                         


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--
Q 016991          105 ------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--  164 (379)
Q Consensus       105 ------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--  164 (379)
                                        .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........  
T Consensus       192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  271 (375)
T cd05104         192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV  271 (375)
T ss_pred             ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence                              467888899999999999999999999999999999999999999999999875543211  


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP-TLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~-~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      ......++..|+|||++.+..+ +.++|||||||++|+|++ |..||...... ...+.+... ....|...+.++.+||
T Consensus       272 ~~~~~~~~~~y~aPE~~~~~~~-~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  350 (375)
T cd05104         272 VKGNARLPVKWMAPESIFNCVY-TFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIM  350 (375)
T ss_pred             ccCCCCCCcceeChhHhcCCCC-CCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHH
Confidence            1112334567999999977665 589999999999999997 99999776543 333333332 2334566789999999


Q ss_pred             HHccCCCCCCCCChHhHhcC
Q 016991          242 HKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+||++||++|||+.++++.
T Consensus       351 ~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         351 KSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHccCChhHCcCHHHHHHH
Confidence            99999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1e-43  Score=331.78  Aligned_cols=255  Identities=29%  Similarity=0.482  Sum_probs=218.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ..|.-.+.||+|++|.||++.+..+++.+|+|.+....   ....+.+.+|+.+++.++||||+++++++...+..|+++
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~   95 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM   95 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence            35666789999999999999999999999999886432   223456889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||++|++|.+++.. +++++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++............
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~  174 (285)
T cd06648          96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKS  174 (285)
T ss_pred             eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccccc
Confidence            99999999998877 78999999999999999999999999999999999999999999999999987654433223344


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC---CCCCCCHhHHHHHHHcc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS---CPFWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~---~p~~~s~~~~~li~~~L  245 (379)
                      ..|++.|+|||.+.+..+ +.++|+||+||++|+|++|+.||...+.......+......   .+..++..+.++|.+||
T Consensus       175 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  253 (285)
T cd06648         175 LVGTPYWMAPEVISRLPY-GTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRML  253 (285)
T ss_pred             ccCCccccCHHHhcCCCC-CCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHc
Confidence            568999999999977665 58999999999999999999999877766555555544322   23337889999999999


Q ss_pred             CCCCCCCCChHhHhcCccccccC
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      +.||.+|||+.++++||||+...
T Consensus       254 ~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         254 VRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             ccChhhCcCHHHHccCcccccCC
Confidence            99999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=3.7e-44  Score=331.70  Aligned_cols=245  Identities=24%  Similarity=0.466  Sum_probs=204.9

Q ss_pred             eccCeeeeeee--cccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            7 RVAKYEVGRTI--GEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         7 ~~~~y~~~~~L--G~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ..++|++.+.+  |+|+||.||++.++.++..+|+|++.......        .|+.+...+ +||||+++++.+...+.
T Consensus        12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~   83 (267)
T PHA03390         12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKG   83 (267)
T ss_pred             HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCe
Confidence            34577887776  99999999999999999999999986543221        122222222 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~  162 (379)
                      .|+||||++|++|.+++.....+++.+++.++.|++.||.|||+.|++||||||+||+++.++ .++|+|||++......
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         84 HVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence            999999999999999998878999999999999999999999999999999999999999998 9999999988654332


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhcccCCCCCCCHhH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT-----LYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~-----~~~~i~~~~~~~p~~~s~~~  237 (379)
                          ....|+..|+|||++.+..+ +.++|+||+||++|+|++|..||.......     ..... ......+..+|+.+
T Consensus       164 ----~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  237 (267)
T PHA03390        164 ----SCYDGTLDYFSPEKIKGHNY-DVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKKLPFIKNVSKNA  237 (267)
T ss_pred             ----ccCCCCCcccChhhhcCCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cccCCcccccCHHH
Confidence                23468899999999987666 489999999999999999999997554322     22222 33345556789999


Q ss_pred             HHHHHHccCCCCCCCCC-hHhHhcCcccc
Q 016991          238 TSLIHKILDPNPKTRIR-IEGIRKHPWFR  265 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s-~~~il~hp~f~  265 (379)
                      .+||.+||++||.+||+ ++++++||||.
T Consensus       238 ~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        238 NDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            99999999999999996 69999999996

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-45  Score=355.58  Aligned_cols=244  Identities=34%  Similarity=0.632  Sum_probs=216.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ....|++...+|.|+||.|..+.+..+++.+++|++.+..       .+..+|+.++... +||||+++++++.+....|
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~  392 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY  392 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence            4678999999999999999999999999999999998762       2334677666555 6999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE-ccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL-DSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll-~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||.+.|+.+.+.+.....+. .++..|+.||+.|+.|||++||+||||||+|||+ +..|+++|+|||.+......  
T Consensus       393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--  469 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--  469 (612)
T ss_pred             eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence            9999999999999998866555 7888999999999999999999999999999999 58999999999998766543  


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                       +.+.|-|..|+|||++...+|+ .++||||||++||+||+|+.||...... ++...+..+.++  .++|.++++||++
T Consensus       470 -~~tp~~t~~y~APEvl~~~~yt-~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--~~vS~~AKdLl~~  545 (612)
T KOG0603|consen  470 -CDTPALTLQYVAPEVLAIQEYT-EACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--ECVSDEAKDLLQQ  545 (612)
T ss_pred             -hcccchhhcccChhhhccCCCC-cchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--cccCHHHHHHHHH
Confidence             5577889999999999977775 9999999999999999999999765444 777777766555  8899999999999


Q ss_pred             ccCCCCCCCCChHhHhcCccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f  264 (379)
                      ||+.||.+|+++.+++.||||
T Consensus       546 LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  546 LLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             hccCChhhCcChhhhccCcch
Confidence            999999999999999999999

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=3.3e-44  Score=337.21  Aligned_cols=256  Identities=27%  Similarity=0.472  Sum_probs=217.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .-|+....||+|+||.||+|.+..+++.||||++......   ..+.+.+|+.+++.++||||+++++.+...+..|+++
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM   97 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc---hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence            3456677899999999999999999999999998654322   2356889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||+++++|...+.. ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++............
T Consensus        98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~  176 (297)
T cd06659          98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS  176 (297)
T ss_pred             ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence            99999999887654 67899999999999999999999999999999999999999999999999998654433333345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHHHHHHcc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L  245 (379)
                      .+|+..|+|||++.+..+ +.++||||+||++|+|++|+.||...+.......+....   ...+..++..+.++|.+||
T Consensus       177 ~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l  255 (297)
T cd06659         177 LVGTPYWMAPEVISRTPY-GTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERML  255 (297)
T ss_pred             eecCccccCHHHHccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHh
Confidence            679999999999977665 589999999999999999999998776655555544332   2233457889999999999


Q ss_pred             CCCCCCCCChHhHhcCccccccCC
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      +.+|.+||+++++++||||.+...
T Consensus       256 ~~~P~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         256 TREPQERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             cCCcccCcCHHHHhhChhhccCCC
Confidence            999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-45  Score=347.15  Aligned_cols=256  Identities=26%  Similarity=0.430  Sum_probs=207.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ..|++.+.||.|+.++||++...+. ..||+|.+... ..+.+.+..+.+||..|.+|+ |.+||+++++-..++.+|+|
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            4799999999999999999988654 45566554332 235567788999999999997 89999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--
Q 016991           88 LEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--  164 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e-~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--  164 (379)
                      |||- ..+|..+|.+.....+ ..++.|..|++.|+.++|+.||+|.||||.|+|+-. |.+||+|||.|.....+..  
T Consensus       439 mE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI  516 (677)
T KOG0596|consen  439 MECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSI  516 (677)
T ss_pred             eecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhcccCccccce
Confidence            9986 5688888887665444 688999999999999999999999999999999865 9999999999987665432  


Q ss_pred             cccccccCCCCCchhhhccCCCC----------CCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcc--cCCCC
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYD----------GSAADVWSCGVILFVLMAGYLPFGETD-LPTLYKKINAAE--FSCPF  231 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~----------~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~~~i~~~~--~~~p~  231 (379)
                      .-.+.|||+.||+||.+....+.          +.++||||||||||+|+.|++||..-. ...-...|....  ..+|.
T Consensus       517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~  596 (677)
T KOG0596|consen  517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPD  596 (677)
T ss_pred             eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccC
Confidence            23567999999999999654332          578999999999999999999996532 222333344332  34554


Q ss_pred             CCCHh-HHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          232 WFSTG-ATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       232 ~~s~~-~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .-+.. +.++++.||..||++|||+.++|+|||++...
T Consensus       597 ~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~  634 (677)
T KOG0596|consen  597 IPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQP  634 (677)
T ss_pred             CCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccccc
Confidence            43333 99999999999999999999999999998643

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-43  Score=326.71  Aligned_cols=254  Identities=31%  Similarity=0.504  Sum_probs=216.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccc--ccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKST--ILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TKV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~--~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~~   84 (379)
                      .+|++.+.||+|+||.||+|.+..+|..||+|.+....  .........+.+|+.+++.++||||+++++.+.+.  ...
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            47999999999999999999999999999999885432  11233456889999999999999999999998753  568


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--  162 (379)
                      ++++||+++++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......  
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            999999999999999988788999999999999999999999999999999999999999999999999998754321  


Q ss_pred             -cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHH
Q 016991          163 -VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATS  239 (379)
Q Consensus       163 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~  239 (379)
                       ........|+..|+|||.+.+..+ +.++|+|||||++|+|++|+.||.+.........+...  ....|..+++++.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  240 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGY-GRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRD  240 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCC-CccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHH
Confidence             112234568899999999977665 48999999999999999999999876655444444332  24467789999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +|.+||+ +|.+||++.+++.|||.
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhcCCCC
Confidence            9999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=4.5e-44  Score=341.73  Aligned_cols=264  Identities=27%  Similarity=0.358  Sum_probs=216.7

Q ss_pred             eccCeee-eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH-----------HHHHHHHHHHHHHhCCCCCcceE
Q 016991            7 RVAKYEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR-----------MVDQIKREISIMKIVRHPNIVRL   74 (379)
Q Consensus         7 ~~~~y~~-~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~-----------~~~~~~~Ei~~l~~l~hp~Iv~l   74 (379)
                      .-++|.. .+.||.|+||.||+|.+..+++.||||++.........           ....+.+|+.+++.++||||+++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   85 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL   85 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence            4568875 47799999999999999999999999998654322210           11247789999999999999999


Q ss_pred             EEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeec
Q 016991           75 HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFG  154 (379)
Q Consensus        75 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfG  154 (379)
                      ++++...+..|++|||+. ++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||
T Consensus        86 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg  164 (335)
T PTZ00024         86 VDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFG  164 (335)
T ss_pred             eEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcc
Confidence            999999999999999996 6899999888889999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCC--------------CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 016991          155 LSALPQQ--------------GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK  220 (379)
Q Consensus       155 l~~~~~~--------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~  220 (379)
                      ++.....              .........+++.|+|||++.+....+.++|+|||||++|+|++|.+||.+.+......
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~  244 (335)
T PTZ00024        165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLG  244 (335)
T ss_pred             ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence            8875441              11222334578899999999765555689999999999999999999998877655444


Q ss_pred             HHHhcc-----c-----------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCC
Q 016991          221 KINAAE-----F-----------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       221 ~i~~~~-----~-----------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                      .+....     .                       ......+.++.++|.+||+.+|.+|||+++++.||||+....+.
T Consensus       245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~  323 (335)
T PTZ00024        245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPC  323 (335)
T ss_pred             HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCC
Confidence            332100     0                       00123578899999999999999999999999999998765543

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=7.5e-44  Score=336.09  Aligned_cols=256  Identities=25%  Similarity=0.382  Sum_probs=215.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ...+|++.+.||+|+||.||+|.+..+|+.||+|.+...........+.+.+|+.+++.++||||+++++++...+..|+
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            34679999999999999999999999999999999875544444455678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      |+||+. |++.+.+.. ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++......   
T Consensus        93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---  168 (307)
T cd06607          93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---  168 (307)
T ss_pred             EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC---
Confidence            999996 566666653 457999999999999999999999999999999999999999999999999988654332   


Q ss_pred             ccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCC-CCCCCHhHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSC-PFWFSTGATSLI  241 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~-p~~~s~~~~~li  241 (379)
                       ....|++.|+|||++.+  ....+.++||||+|+++|+|++|+.||.+.+.......+.... ... +..++.++.++|
T Consensus       169 -~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  247 (307)
T cd06607         169 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFV  247 (307)
T ss_pred             -CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHH
Confidence             24568889999999842  2334589999999999999999999998776655444433322 222 234688999999


Q ss_pred             HHccCCCCCCCCChHhHhcCcccccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||..||.+||++.+++.||||...
T Consensus       248 ~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         248 DSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             HHHhcCChhhCcCHHHHhcChhhccc
Confidence            99999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=7e-44  Score=331.59  Aligned_cols=255  Identities=25%  Similarity=0.378  Sum_probs=206.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~-l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .+|++.+.||+|+||.||+|.+..+|..||||.+........  ...+..|+.+ ++.++||||+++++++...+..|++
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv   78 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQE--QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC   78 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHH--HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence            479999999999999999999999999999999876432222  2345556554 6778999999999999999999999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           88 LEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      |||++ |+|.+.+..    ...+++..++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence            99996 577666643    34689999999999999999999997 9999999999999999999999999998754332


Q ss_pred             cccccccccCCCCCchhhhccC---CCCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcccCCC-CCCCHh
Q 016991          163 VELLHTTCGTPNYVAPEVLSNR---GYDGSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKINAAEFSCP-FWFSTG  236 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~--~~~~~~~i~~~~~~~p-~~~s~~  236 (379)
                       .......|+..|+|||++.+.   ...+.++|+||+||++|+|++|+.||....  ...+...+.......| ..+|.+
T Consensus       158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd06617         158 -VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPE  236 (283)
T ss_pred             -cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHH
Confidence             112235688899999988542   123578999999999999999999997532  2233333333333343 347899


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.++|.+||..+|.+||++.++++||||+..
T Consensus       237 l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         237 FQDFVNKCLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence            9999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.6e-43  Score=325.97  Aligned_cols=251  Identities=29%  Similarity=0.543  Sum_probs=214.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+...........+.+.+|+.+++.++|+||+++++.+...+..+++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            68999999999999999999999999999999987644444445678999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           89 EFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        89 E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      ||+++++|.+++..    ...+++.++..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++........
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~  161 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence            99999999998864    34589999999999999999999999999999999999999999999999999876544333


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhccc-CCCC-CCCHhHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL--PTLYKKINAAEF-SCPF-WFSTGATSL  240 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~~~-~~p~-~~s~~~~~l  240 (379)
                      ......|++.|+|||.+.+..+. .++|+||+||++|+|++|..||.....  ......+..... +.|. .++.++.++
T Consensus       162 ~~~~~~~~~~y~apE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T cd08224         162 AAHSLVGTPYYMSPERIHENGYN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDL  240 (267)
T ss_pred             ccceecCCccccCHHHhccCCCC-chhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHH
Confidence            34456789999999999776664 899999999999999999999965432  234444433322 2343 678899999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      |.+||..+|++|||+.+|++
T Consensus       241 i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         241 VSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHcCCCcccCCCHHHHHH
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=5.4e-44  Score=329.55  Aligned_cols=252  Identities=29%  Similarity=0.528  Sum_probs=214.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++.+.||.|+||.||+|.+..+|+.||||.+.............+.+|+.+++.++||||+++++++...+..+++
T Consensus         1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence            46899999999999999999999999999999988765444444556788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           88 LEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |||++|++|.+++..    ...+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence            999999999998863    3468999999999999999999999999999999999999999999999999987665443


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHhcccC--CCCCCCHhHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL--PTLYKKINAAEFS--CPFWFSTGATS  239 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~--~p~~~s~~~~~  239 (379)
                      ......+|+..|+|||.+.+..+ +.++|+||+|+++|+|++|..||.+...  ....+.+....+.  .+..+++++.+
T Consensus       161 ~~~~~~~~~~~~~ape~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08229         161 TAAHSLVGTPYYMSPERIHENGY-NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ  239 (267)
T ss_pred             cccccccCCcCccCHHHhcCCCc-cchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHH
Confidence            33445678999999999977665 4889999999999999999999976543  2333444333322  22357899999


Q ss_pred             HHHHccCCCCCCCCChHhHhc
Q 016991          240 LIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~  260 (379)
                      +|.+||+.||.+|||+.++++
T Consensus       240 li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         240 LVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHhcCCCcccCCCHHHHHH
Confidence            999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8e-47  Score=387.09  Aligned_cols=255  Identities=33%  Similarity=0.535  Sum_probs=227.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      ||.-+..||.|.||.||.|.+.++|+..|+|.+.-.... ......+.+|..++..++|||+|++|++=...+.+||.||
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence            678889999999999999999999999999998654433 4556789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC----ccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG----VEL  165 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~----~~~  165 (379)
                      ||+||+|.+.+...+-.+|...+.|..|++.|+.|||+.||+||||||+||+++.+|.+|++|||.|......    ...
T Consensus      1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~e 1394 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGE 1394 (1509)
T ss_pred             HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHH
Confidence            9999999999998888899999999999999999999999999999999999999999999999988654432    234


Q ss_pred             ccccccCCCCCchhhhccCC--CCCCchhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHhcccCCCCCCCHhHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRG--YDGSAADVWSCGVILFVLMAGYLPFGET--DLPTLYKKINAAEFSCPFWFSTGATSLI  241 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~--~~~~~~DiwSlGvil~~ll~g~~Pf~~~--~~~~~~~~i~~~~~~~p~~~s~~~~~li  241 (379)
                      +....||+.|||||++.+..  -.+.++||||||||+.||.+|+.||...  ++.-+|..-....+++|..+|++.++||
T Consensus      1395 l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFl 1474 (1509)
T KOG4645|consen 1395 LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFL 1474 (1509)
T ss_pred             HHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHH
Confidence            66788999999999997543  2357899999999999999999999764  4556666666667889999999999999


Q ss_pred             HHccCCCCCCCCChHhHhcCcccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      .+||+.||++|.++.||++|.|-+
T Consensus      1475 e~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1475 EHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred             HHHHhcCchhhhHHHHHHHhhccc
Confidence            999999999999999999998864

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=7.7e-44  Score=341.32  Aligned_cols=256  Identities=28%  Similarity=0.390  Sum_probs=208.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR------   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~------   81 (379)
                      -++|++.+.||.|+||.||+|.+..+|..||+|.+.....   ...+.+.+|+.+++.++||||+++++++...      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence            4799999999999999999999999999999999865432   3346788999999999999999999876543      


Q ss_pred             --------CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEee
Q 016991           82 --------TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSD  152 (379)
Q Consensus        82 --------~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~D  152 (379)
                              ...|+||||++ ++|.+.+.. +.+++..++.++.||+.||.|||+.||+||||||+||+++. ++.++|+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d  158 (342)
T cd07854          81 DVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD  158 (342)
T ss_pred             ccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence                    46899999996 588877754 67999999999999999999999999999999999999984 55789999


Q ss_pred             eccccCCCCC---cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----
Q 016991          153 FGLSALPQQG---VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA----  225 (379)
Q Consensus       153 fGl~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~----  225 (379)
                      ||++......   ........|+..|+|||++......+.++|||||||++|+|++|+.||.+.+.......+...    
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~  238 (342)
T cd07854         159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV  238 (342)
T ss_pred             cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            9998654321   112233467889999998866555568999999999999999999999776544333322111    


Q ss_pred             ---------------------cc-----CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 ---------------------EF-----SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 ---------------------~~-----~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                           ..     .+...++.++.+||.+||+.||.+|||+++++.||||+...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence                                 00     01124688899999999999999999999999999998643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.4e-45  Score=328.73  Aligned_cols=261  Identities=29%  Similarity=0.423  Sum_probs=210.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGE----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-RT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~~   82 (379)
                      ...|++.+.||+|+||.||+|...+++.    .+|||.+...+-.. .......+|+.+++.++|||++.+..++-+ +.
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~  101 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHDK  101 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence            3579999999999999999997766543    78999886543221 233557799999999999999999999877 88


Q ss_pred             eEEEEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC----CCeEEeee
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY----GNLKVSDF  153 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~----~~lkl~Df  153 (379)
                      .+++++||++. +|+..|.-.     ..++...++.++.||+.|+.|||++.|+||||||.|||+..+    |.+||+||
T Consensus       102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence            99999999964 788888532     368899999999999999999999999999999999999877    89999999


Q ss_pred             ccccCCCCCccc---ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHH
Q 016991          154 GLSALPQQGVEL---LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------PTLYKK  221 (379)
Q Consensus       154 Gl~~~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---------~~~~~~  221 (379)
                      |+++.+...-..   ....+-|.+|+|||.+.+...++++.|+|+.|||+.||++-++.|.+...         .....+
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r  260 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR  260 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence            999987663322   34456789999999999999889999999999999999999998865321         111111


Q ss_pred             HHh-ccc----------CCCC--------------------C------CCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          222 INA-AEF----------SCPF--------------------W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       222 i~~-~~~----------~~p~--------------------~------~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      |.. ...          ..|.                    |      -++.+.+|+.+||..||.+|+|++++++|+||
T Consensus       261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF  340 (438)
T KOG0666|consen  261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYF  340 (438)
T ss_pred             HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccccc
Confidence            110 000          0111                    1      25668999999999999999999999999999


Q ss_pred             cccCCC
Q 016991          265 RKNYNP  270 (379)
Q Consensus       265 ~~~~~~  270 (379)
                      .....|
T Consensus       341 ~~d~lp  346 (438)
T KOG0666|consen  341 TEDPLP  346 (438)
T ss_pred             ccCCCC
Confidence            987655

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.3e-44  Score=342.62  Aligned_cols=260  Identities=26%  Similarity=0.420  Sum_probs=214.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE----eCCeE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA----SRTKV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~----~~~~~   84 (379)
                      .+|++.+.||.|+||.||+|.+..+|..||+|++..... .......+.+|+.+++.++||||+++++++.    ....+
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            689999999999999999999999999999999875432 2234567788999999999999999998875    34578


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus        84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  162 (334)
T cd07855          84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT  162 (334)
T ss_pred             EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence            99999995 6899998877889999999999999999999999999999999999999999999999999986543311 


Q ss_pred             ---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh----------------
Q 016991          164 ---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA----------------  224 (379)
Q Consensus       164 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~----------------  224 (379)
                         ......+|+..|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+..                
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  242 (334)
T cd07855         163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD  242 (334)
T ss_pred             CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence               1223457899999999987655456899999999999999999999987654332221111                


Q ss_pred             --------ccc--CC-----CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          225 --------AEF--SC-----PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       225 --------~~~--~~-----p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                              ...  ..     ....++++.++|.+||+.||.+|||+++++.||||.....+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~  303 (334)
T cd07855         243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDP  303 (334)
T ss_pred             hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence                    000  01     12368899999999999999999999999999999865544

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=3.8e-44  Score=336.11  Aligned_cols=257  Identities=26%  Similarity=0.448  Sum_probs=217.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||++.+..++..||+|.+....   ....+.+.+|+.+++.++||||+++++.+...+..|
T Consensus        16 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~   92 (293)
T cd06647          16 DPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELW   92 (293)
T ss_pred             CchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEE
Confidence            34679999999999999999999999999999999986432   223467889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +|+||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.........
T Consensus        93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~  171 (293)
T cd06647          93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK  171 (293)
T ss_pred             EEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccc
Confidence            99999999999998865 46889999999999999999999999999999999999999999999999988655443333


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~  242 (379)
                      .....|++.|+|||.+.+..+ +.++|+||+||++|++++|+.||...+.......+...   ....+..++..+.++|.
T Consensus       172 ~~~~~~~~~y~~PE~~~~~~~-~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  250 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  250 (293)
T ss_pred             cccccCChhhcCchhhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence            344578899999999977655 58999999999999999999999776543322222211   12233446888999999


Q ss_pred             HccCCCCCCCCChHhHhcCcccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +||..+|.+||++++++.||||+..
T Consensus       251 ~~l~~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         251 RCLEMDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             HHccCChhhCcCHHHHhcCHHHhcC
Confidence            9999999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.9e-43  Score=322.67  Aligned_cols=253  Identities=32%  Similarity=0.538  Sum_probs=220.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TKVYII   87 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~~~lv   87 (379)
                      +|++.+.||+|++|.||+|.+..++..|++|++...... ....+.+.+|+.++++++||||+++++.+...  ...+++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence            588999999999999999999999999999998765432 34567899999999999999999999999988  899999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--c
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--L  165 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~  165 (379)
                      +||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+........  .
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  159 (260)
T cd06606          80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEG  159 (260)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccccc
Confidence            99999999999998888999999999999999999999999999999999999999999999999999876655322  1


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHH--hcccCCCCCCCHhHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYKKIN--AAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~~~i~--~~~~~~p~~~s~~~~~li~  242 (379)
                      .....++..|+|||.+..... +.++|+||+|+++++|++|..||...+ .......+.  ......|..++..+.++|.
T Consensus       160 ~~~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  238 (260)
T cd06606         160 TGSVRGTPYWMAPEVIRGEEY-GRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLR  238 (260)
T ss_pred             ccCCCCCccccCHhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHH
Confidence            345678899999999976654 589999999999999999999998765 223333333  2334566778999999999


Q ss_pred             HccCCCCCCCCChHhHhcCccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +||..||.+||++.++++||||
T Consensus       239 ~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         239 KCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HhCcCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=7.1e-44  Score=335.80  Aligned_cols=253  Identities=23%  Similarity=0.345  Sum_probs=209.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEE--EEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESV--AMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~v--aiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++.+.||+|+||.||+|.+..++..+  |+|.+..  .........+.+|+.++..+ +||||+++++++...
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~--~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~   80 (303)
T cd05088           3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE--YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR   80 (303)
T ss_pred             ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecc--cCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence            345678999999999999999999998887654  6665542  22333456788999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      +..|+||||+++++|.+++...+                .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~  160 (303)
T cd05088          81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN  160 (303)
T ss_pred             CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence            99999999999999999997543                57889999999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q 016991          146 GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINA  224 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~  224 (379)
                      +.+||+|||++....... ......++..|+|||++.+..+ +.++||||+||++|+|++ |.+||...+.....+.+..
T Consensus       161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  238 (303)
T cd05088         161 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  238 (303)
T ss_pred             CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCC-cccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence            999999999986432211 1111224567999999876554 589999999999999998 9999988777666666544


Q ss_pred             c-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          225 A-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       225 ~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      . ....|..+++++.+||.+||+.+|.+||++++++++
T Consensus       239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3 233455678999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-43  Score=339.23  Aligned_cols=256  Identities=26%  Similarity=0.394  Sum_probs=213.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      ..++|++.+.||+|+||.||+|.+..+|..||||++.+.. ........+.+|+.+|+.++||||+++++++....    
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            4578999999999999999999999999999999986532 23334467889999999999999999999987553    


Q ss_pred             --eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           83 --KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                        ..++||||+ |++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++....
T Consensus        92 ~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          92 FHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             cceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence              468999999 778887765 4689999999999999999999999999999999999999999999999999987544


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------  227 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------  227 (379)
                      ..   .....+++.|+|||.+.+....+.++|+|||||++|+|++|..||.+.+.......+.....             
T Consensus       170 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd07880         170 SE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSE  246 (343)
T ss_pred             cC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcch
Confidence            32   23446789999999997644456899999999999999999999987765444333222110             


Q ss_pred             ------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          228 ------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       228 ------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                        .....+++++.++|.+||+.||.+|||+.+++.||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhc
Confidence                              11235688899999999999999999999999999998654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.7e-43  Score=325.96  Aligned_cols=249  Identities=26%  Similarity=0.377  Sum_probs=213.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ...+|++.+.||+|+||.||+|.+..++..||+|++....    .....+.+|+.+++.++||||+++++++...+..++
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052           4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEE
Confidence            3457999999999999999999999999999999986532    224568899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+++++|.+++...  ..+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||++........
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~  159 (263)
T cd05052          80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  159 (263)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence            99999999999998653  3588999999999999999999999999999999999999999999999999876544221


Q ss_pred             cc-cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          165 LL-HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 ~~-~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .. ....++..|+|||.+.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++++.++|
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  238 (263)
T cd05052         160 TAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELM  238 (263)
T ss_pred             eccCCCCCccccCCHHHhccCCC-CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Confidence            11 12223567999999876665 488999999999999998 99999888877777666553 4556777899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||++|||+.++++
T Consensus       239 ~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         239 RACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHccCCcccCCCHHHHHH
Confidence            9999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8e-44  Score=341.34  Aligned_cols=259  Identities=26%  Similarity=0.408  Sum_probs=216.0

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe--
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK--   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~--   83 (379)
                      ..-++|++.+.||+|++|.||+|.+..++..||||++..... .....+.+.+|+.+++.++||||+++++++...+.  
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE   90 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence            356789999999999999999999999999999999865422 22334667889999999999999999988765554  


Q ss_pred             ----EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           84 ----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        84 ----~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                          .|+|+||+ |++|.+++.. .++++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus        91 ~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851          91 DFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             ccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence                99999998 7799888865 67999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF------------  227 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~------------  227 (379)
                      ...   .....+++.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+....-            
T Consensus       169 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  245 (343)
T cd07851         169 DDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS  245 (343)
T ss_pred             ccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccc
Confidence            432   34556888999999987654556899999999999999999999987766544443322110            


Q ss_pred             -------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          228 -------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       228 -------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                                         .....+++++.++|.+||++||.+|||+.++++||||+....+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence                               0012358899999999999999999999999999999875443

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.4e-43  Score=331.20  Aligned_cols=257  Identities=33%  Similarity=0.619  Sum_probs=217.9

Q ss_pred             CeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~   84 (379)
                      .|++.+.||.|+||.||.|.+.   .+|..||+|++...... .....+.+.+|+.+++.+ +|+||+++++.+..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4899999999999999999875   47899999998764332 223346788999999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-c
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-V  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-~  163 (379)
                      |+|+||+++++|.+++.....+++..+..++.||+.||.|||+.|++||||+|+|||++.++.+||+|||++...... .
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            999999999999999988888999999999999999999999999999999999999999999999999998754332 1


Q ss_pred             ccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcccCCCCCCCHhHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEFSCPFWFSTGAT  238 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~~p~~~s~~~~  238 (379)
                      ......+|+..|+|||.+... ...+.++||||+|+++|+|++|..||...+    .......+.......|..+++.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK  240 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHH
Confidence            223356789999999998653 234578999999999999999999996432    233444444555666777899999


Q ss_pred             HHHHHccCCCCCCCC-----ChHhHhcCccccc
Q 016991          239 SLIHKILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       239 ~li~~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +++.+||+.||.+||     ++++++.||||+.
T Consensus       241 ~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  273 (290)
T cd05613         241 DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK  273 (290)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence            999999999999997     8899999999975

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.6e-45  Score=349.94  Aligned_cols=256  Identities=32%  Similarity=0.571  Sum_probs=221.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +-|..++.||-|+||+|-++...+|...||+|.+++..+...+.+..++.|..||..-..+-||+||..|++++.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            34777899999999999999999999999999999988888888899999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC--------
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ--------  160 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~--------  160 (379)
                      +|++||++-.+|.+.+-++|..++.|+.+|..|+++.|..|+|||||||+|||||.+|++||+|||||+-+.        
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY  788 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  788 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999986321        


Q ss_pred             -CCc-----------c----------------------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC
Q 016991          161 -QGV-----------E----------------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG  206 (379)
Q Consensus       161 -~~~-----------~----------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g  206 (379)
                       .++           .                      ..+..+||+.|+|||++...+|. ..+|+||.|||||+|+.|
T Consensus       789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~-q~cdwws~gvil~em~~g  867 (1034)
T KOG0608|consen  789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT-QLCDWWSVGVILYEMLVG  867 (1034)
T ss_pred             cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc-ccchhhHhhHHHHHHhhC
Confidence             000           0                      01234699999999999998885 899999999999999999


Q ss_pred             CCCCCCCChHHHHHHH----HhcccCCCCCCCHhHHHHHHHccCCCCCCCC---ChHhHhcCccccc
Q 016991          207 YLPFGETDLPTLYKKI----NAAEFSCPFWFSTGATSLIHKILDPNPKTRI---RIEGIRKHPWFRK  266 (379)
Q Consensus       207 ~~Pf~~~~~~~~~~~i----~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~---s~~~il~hp~f~~  266 (379)
                      ++||...+..+...++    ....+..-..+|+++.++|.+++ -+++.|+   .++++..||||+.
T Consensus       868 ~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkg  933 (1034)
T KOG0608|consen  868 QPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKG  933 (1034)
T ss_pred             CCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccc
Confidence            9999776554332222    22233444568999999999966 4678887   4678999999975

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-44  Score=360.67  Aligned_cols=244  Identities=33%  Similarity=0.507  Sum_probs=206.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEE----e---C
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLA----S---R   81 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~----~---~   81 (379)
                      +++|.+.|.+|+|+.||+|.+...|..||+|++-..   ++...+.+++||++|+.|+ |+|||.+++...    .   .
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~  114 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV  114 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence            567789999999999999999988899999987543   5667889999999999998 999999999321    1   1


Q ss_pred             CeEEEEEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           82 TKVYIILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      -.++|.||||.||.|.+++..  ..+|+|.++.+||.|+++||.+||..+  |||||||-|||||+.+|+.||||||.+.
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            257899999999999999974  357999999999999999999999987  9999999999999999999999999886


Q ss_pred             CCCCCccc---------ccccccCCCCCchhhhc---cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Q 016991          158 LPQQGVEL---------LHTTCGTPNYVAPEVLS---NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA  225 (379)
Q Consensus       158 ~~~~~~~~---------~~~~~gt~~y~aPE~l~---~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~  225 (379)
                      ..-.....         --....|+.|+|||++.   +.+ .++|+|||+|||+||-|+....||++...    -.|..+
T Consensus       195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p-I~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng  269 (738)
T KOG1989|consen  195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP-IGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNG  269 (738)
T ss_pred             cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC-CcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEec
Confidence            43221111         11234799999999973   333 36999999999999999999999987743    246778


Q ss_pred             ccCCCC--CCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          226 EFSCPF--WFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       226 ~~~~p~--~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .|.+|+  .+|..+.+||+.||++||.+||++-|++.+
T Consensus       270 ~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  270 NYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             cccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            888886  589999999999999999999999988764

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1e-43  Score=330.02  Aligned_cols=251  Identities=23%  Similarity=0.337  Sum_probs=213.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..++|.+.+.||+|+||.||+|.+..     ++..||||.+.....  ....+.+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   80 (280)
T cd05049           3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEG   80 (280)
T ss_pred             ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence            35679999999999999999998753     468999999865432  22447889999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG--------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN  147 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~--------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~  147 (379)
                      ...|++|||++|++|.+++...+              .+++..+..++.|++.||.|||++|++||||||+||+++.++.
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~  160 (280)
T cd05049          81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence            99999999999999999997542              4788899999999999999999999999999999999999999


Q ss_pred             eEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q 016991          148 LKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINA  224 (379)
Q Consensus       148 lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~  224 (379)
                      ++|+|||++.......  .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKF-TTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQ  239 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccCCc-chhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            9999999986433211  11223346788999999987665 589999999999999998 9999988877777777765


Q ss_pred             cccC-CCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          225 AEFS-CPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       225 ~~~~-~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +... .|..++..+.+++.+||+.||.+|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         240 GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            5543 45568999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.9e-43  Score=365.57  Aligned_cols=252  Identities=23%  Similarity=0.355  Sum_probs=206.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||.||+|.+..+|+.||||++...........+++.+|+.+++.++||||+++++++.+.+..|++
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            58999999999999999999999999999999999765444444557789999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           88 LEFVTGGELFDKIVHQ-----------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-----------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      |||++|++|.+++...           ..++...+..++.||+.||+|||++||+||||||+||+++.+|.++|+|||++
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence            9999999999988642           23456678899999999999999999999999999999999999999999998


Q ss_pred             cCCCCCc------------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH
Q 016991          157 ALPQQGV------------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL  218 (379)
Q Consensus       157 ~~~~~~~------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~  218 (379)
                      .......                  ......+||+.|+|||++.+..+ +.++||||+||++|+|++|..||...+....
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~-S~kSDIWSLGVILyELLTG~~PF~~~~~~ki  239 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPA-SESTDIYALGVILYQMLTLSFPYRRKKGRKI  239 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCC-CcHhHHHHHHHHHHHHHHCCCCCCCcchhhh
Confidence            7552110                  01123479999999999987766 5899999999999999999999977554332


Q ss_pred             HHHHH-hcc--cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          219 YKKIN-AAE--FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       219 ~~~i~-~~~--~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..... ...  ......+++.+.+++.+||..||++|++..+.+.
T Consensus       240 ~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        240 SYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            22111 111  1111347889999999999999999987765554

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=2.5e-43  Score=329.43  Aligned_cols=256  Identities=23%  Similarity=0.299  Sum_probs=212.0

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      -++|++.+.||+|+||.||+|.++.     .+..||+|.+.....  ......+.+|+.+++.++||||+++++++...+
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS--LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ   82 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC--HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence            4689999999999999999997652     355899998864432  223345788999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           83 KVYIILEFVTGGELFDKIVHQG----------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~----------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      ..|+||||+++|+|.+++...+          ..+...+..++.||+.||.|||++||+||||||+||+++.++.++|+|
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~D  162 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGD  162 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECc
Confidence            9999999999999999997532          245677889999999999999999999999999999999999999999


Q ss_pred             eccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cC
Q 016991          153 FGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FS  228 (379)
Q Consensus       153 fGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~  228 (379)
                      ||++........  ......++..|+|||.+.+..+ +.++|+||+||++|+|++ |..||.+.+.......+.... ..
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~-~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~  241 (288)
T cd05061         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF-TTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLD  241 (288)
T ss_pred             CCccccccccccccccCCCcccccccCHHHhccCCC-ChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            999875433211  1122345678999999977665 589999999999999998 899998887777666655443 34


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhc------Cccccc
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRK------HPWFRK  266 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~------hp~f~~  266 (379)
                      .|...++.+.+++.+||+.||.+|||+.++++      ||||+.
T Consensus       242 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~  285 (288)
T cd05061         242 QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE  285 (288)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence            56677899999999999999999999999987      888864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.2e-44  Score=340.34  Aligned_cols=258  Identities=29%  Similarity=0.417  Sum_probs=218.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-----KV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-----~~   84 (379)
                      +|++.+.||.|++|.||+|.+..+|..||||.+.... ......+.+.+|+.+++.++||||+++++++....     .+
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence            6999999999999999999999999999999987543 22334567899999999999999999999987765     89


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |++|||+. ++|.+.+.....+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++....... 
T Consensus        80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence            99999996 5898888887799999999999999999999999999999999999999999999999999987655432 


Q ss_pred             --ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-------------
Q 016991          164 --ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-------------  228 (379)
Q Consensus       164 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-------------  228 (379)
                        .......+++.|+|||++.+....+.++|+||+|+++|+|++|.+||.+.+....+..+....-.             
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  238 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEK  238 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccc
Confidence              22345568899999999987744568999999999999999999999887765555444321100             


Q ss_pred             ------------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          229 ------------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       229 ------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                        ....+++++.++|.+||+.||.+|||+++++.||||+....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         239 ARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             hhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence                              11236788999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-45  Score=349.62  Aligned_cols=253  Identities=25%  Similarity=0.401  Sum_probs=216.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|.-++.||.|+||.||.|++..+.+.||||.+.-..-...+.-..+.+|+..|+.++|||++.+.++|-.....|+|||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46667899999999999999999999999999876544444445679999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           90 FVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        90 ~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      ||- |+-.|.+. ..+++.|.++..++.+.+.||.|||+.+.||||||..|||+++.|.+||+|||.+.....    .++
T Consensus       107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P----Ans  181 (948)
T KOG0577|consen  107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP----ANS  181 (948)
T ss_pred             HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc----hhc
Confidence            994 56666664 457899999999999999999999999999999999999999999999999998876543    467


Q ss_pred             cccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcccCCCC-CCCHhHHHHHHHc
Q 016991          169 TCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT-LYKKINAAEFSCPF-WFSTGATSLIHKI  244 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~p~-~~s~~~~~li~~~  244 (379)
                      .+|||.|||||++..  .+.++-++||||||++..+|.-.++|....+.+. +|-...+..+.++. ..|..+++|+..|
T Consensus       182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~C  261 (948)
T KOG0577|consen  182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC  261 (948)
T ss_pred             ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHH
Confidence            899999999999853  3444589999999999999999999998877764 44433444444432 3688999999999


Q ss_pred             cCCCCCCCCChHhHhcCcccccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      |+.-|..|||.+++++|+|....
T Consensus       262 LqKipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  262 LQKIPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             HhhCcccCCcHHHHhhcchhccC
Confidence            99999999999999999998754

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-43  Score=323.01  Aligned_cols=244  Identities=25%  Similarity=0.391  Sum_probs=213.9

Q ss_pred             eeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 016991           15 RTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      +.||+|+||.||+|.+...   +..||+|++.......  ..+.+.+|+..++.++|+||+++++++......+++|||+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence            4699999999999999866   8999999987654322  4578999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           92 TGGELFDKIVHQ---------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        92 ~gg~L~~~l~~~---------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ++++|.+++...         ..+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||.+......
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  158 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD  158 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence            999999999875         78999999999999999999999999999999999999999999999999998765543


Q ss_pred             c--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHH
Q 016991          163 V--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGAT  238 (379)
Q Consensus       163 ~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  238 (379)
                      .  .......+++.|+|||.+....+ +.++|||||||++|+|++ |..||...+.....+.+... ....|..+|+++.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (262)
T cd00192         159 DYYRKKTGGKLPIRWMAPESLKDGIF-TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELY  237 (262)
T ss_pred             cccccccCCCcCccccCHHHhccCCc-chhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHH
Confidence            2  22334567889999999877654 589999999999999998 69999988877777776643 3456778899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcC
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +++.+||..||.+|||+.+++++
T Consensus       238 ~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         238 ELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHHHccCCcccCcCHHHHHHh
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.2e-43  Score=334.21  Aligned_cols=258  Identities=26%  Similarity=0.399  Sum_probs=208.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC---
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR---   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~---   81 (379)
                      ...+++|++.+.||.|+||.||+|.+..+++.||||++....... .....+.+|+.+++.++||||+++++++...   
T Consensus         4 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (311)
T cd07866           4 CSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDK   82 (311)
T ss_pred             CcccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheeccccc
Confidence            345789999999999999999999999999999999986543222 1224567899999999999999999887433   


Q ss_pred             -----CeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           82 -----TKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        82 -----~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                           ..+|+|+||+.+ +|...+.. ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||+
T Consensus        83 ~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866          83 SKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             ccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence                 357999999964 67666654 45799999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcc-----------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q 016991          156 SALPQQGVE-----------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA  224 (379)
Q Consensus       156 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~  224 (379)
                      +........           ......|++.|+|||.+.+....+.++||||+||++|+|++|++||.+.+.......+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~  241 (311)
T cd07866         162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFK  241 (311)
T ss_pred             chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            875433211           112335788899999987655456899999999999999999999988776554444322


Q ss_pred             ccc-----------------------CCC-------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          225 AEF-----------------------SCP-------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       225 ~~~-----------------------~~p-------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      ...                       ..|       ..+++.+.++|.+||+.||.+|||+.+++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            100                       001       1245678899999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.7e-43  Score=328.11  Aligned_cols=252  Identities=22%  Similarity=0.356  Sum_probs=211.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEE----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQN----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      .+.+|++.+.||+|+||+||+|.+    ..++..||+|.+....  .......+.+|+.+++.++||||+++++++....
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   80 (283)
T cd05090           3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ   80 (283)
T ss_pred             ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence            457899999999999999999985    3456899999886432  2334467889999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      ..|++|||+++++|.+++...                 ..+++.++..++.|++.||.|||++||+||||||+||+++.+
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~  160 (283)
T cd05090          81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ  160 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence            999999999999999988532                 247888899999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 016991          146 GNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI  222 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i  222 (379)
                      +.+||+|||++.......  .......++..|+|||++.+..+ +.++|+|||||++|+|++ |.+||.+.+.......+
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~  239 (283)
T cd05090         161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKF-SSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMV  239 (283)
T ss_pred             CcEEeccccccccccCCcceecccCCCccceecChHHhccCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            999999999987543321  12233446678999999976655 589999999999999998 99999887766655555


Q ss_pred             Hhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          223 NAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       223 ~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .... ...|..+++.+.+++.+||+.||.+||++.+|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         240 RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            4433 45667789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3e-43  Score=322.98  Aligned_cols=247  Identities=23%  Similarity=0.383  Sum_probs=209.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|++.+.||+|+||.||++... ++..+|+|.+......    .+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence            357999999999999999999886 4568999987654322    25678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc-
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL-  165 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~-  165 (379)
                      |||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||.+......... 
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05114          78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS  157 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence            9999999999998753 56899999999999999999999999999999999999999999999999988754332111 


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHK  243 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~  243 (379)
                      .....++..|+|||++.+..+ +.++|+||+|+++|+|++ |+.||...+.......+.... ...|...+.++.+++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~-~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~  236 (256)
T cd05114         158 SSGAKFPVKWSPPEVFNFSKY-SSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYS  236 (256)
T ss_pred             cCCCCCchhhCChhhcccCcc-chhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Confidence            112234567999999976665 489999999999999999 999998888777777766543 34466678899999999


Q ss_pred             ccCCCCCCCCChHhHhc
Q 016991          244 ILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~  260 (379)
                      |++.||.+|||++++++
T Consensus       237 c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         237 CWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HccCCcccCcCHHHHHH
Confidence            99999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.6e-43  Score=332.35  Aligned_cols=259  Identities=29%  Similarity=0.474  Sum_probs=212.2

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-   82 (379)
                      ++..+++|++.+.||+|+||.||+|.+..+|+.||||++....... .....+.+|+.+++.++||||+++++++.+.. 
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~   80 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQLNHRNIVNLKEIVTDKQD   80 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhCCCCCeeeeeheecCcch
Confidence            3456789999999999999999999999999999999987543222 22356778999999999999999999887654 


Q ss_pred             ---------eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           83 ---------KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        83 ---------~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                               .+|+++||+++ ++.+.+... ..+++..++.++.||+.||.|||+.||+||||||+||++++++.+||+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d  159 (302)
T cd07864          81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD  159 (302)
T ss_pred             hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence                     89999999976 676766543 4789999999999999999999999999999999999999999999999


Q ss_pred             eccccCCCCCcc-cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--c--
Q 016991          153 FGLSALPQQGVE-LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--F--  227 (379)
Q Consensus       153 fGl~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~--  227 (379)
                      ||++........ ......++..|+|||.+.+....+.++||||+||++++|++|++||...+.......+....  .  
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~  239 (302)
T cd07864         160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCP  239 (302)
T ss_pred             ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence            999876544321 22234567889999998765545689999999999999999999998766554443332210  0  


Q ss_pred             --------------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          228 --------------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       228 --------------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                                .....+++.+.++|.+||+.||.+|||+++++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         240 AVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             hhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                                      0012368899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=4.4e-43  Score=327.82  Aligned_cols=248  Identities=23%  Similarity=0.351  Sum_probs=210.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .+|.+.+.||+|+||+||++..     ..++..+|+|.+....   ....+.+.+|+.+++.++||||+++++++...+.
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   81 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            5799999999999999999985     3355679999886532   3345678999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEE
Q 016991           84 VYIILEFVTGGELFDKIVHQG-------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKV  150 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~-------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl  150 (379)
                      .|++|||+++++|.+++...+             .+++..+..++.||+.||+|||++|++||||||+||+++.++.++|
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEe
Confidence            999999999999999997543             4899999999999999999999999999999999999999999999


Q ss_pred             eeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-
Q 016991          151 SDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-  226 (379)
Q Consensus       151 ~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-  226 (379)
                      +|||++........  ......+++.|+|||++.+..+ +.++|||||||++|+|++ |.+||...+.......+.... 
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~  240 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF-TTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV  240 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc
Confidence            99999875433211  1223345778999999977655 489999999999999998 999998887777777776655 


Q ss_pred             cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          227 FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       227 ~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ...+..+++++.+|+.+||++||.+|||+.+++.
T Consensus       241 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         241 LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            3445568999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=7.2e-44  Score=357.61  Aligned_cols=261  Identities=27%  Similarity=0.410  Sum_probs=197.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCC-cEEEEEE--------------eecccccchHHHHHHHHHHHHHHhCCCC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETG-ESVAMKV--------------LAKSTILKHRMVDQIKREISIMKIVRHP   69 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~-~~vaiK~--------------i~~~~~~~~~~~~~~~~Ei~~l~~l~hp   69 (379)
                      ....++|++++.||+|+||+||++..+... ...+.|.              +.+...........+.+|+.+|+.++||
T Consensus       144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp  223 (501)
T PHA03210        144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE  223 (501)
T ss_pred             hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence            345679999999999999999998765332 2222221              1111111223446688999999999999


Q ss_pred             CcceEEEEEEeCCeEEEEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc
Q 016991           70 NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS  144 (379)
Q Consensus        70 ~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~-----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~  144 (379)
                      ||+++++++...+..|++++++ +++|..++...     .......++.++.||+.||.|||++||+||||||+|||++.
T Consensus       224 nIv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~  302 (501)
T PHA03210        224 NILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNC  302 (501)
T ss_pred             CcCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence            9999999999999999999998 56777776542     23446778899999999999999999999999999999999


Q ss_pred             CCCeEEeeeccccCCCCCc-ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCC-CCCCCC--h-HHHH
Q 016991          145 YGNLKVSDFGLSALPQQGV-ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYL-PFGETD--L-PTLY  219 (379)
Q Consensus       145 ~~~lkl~DfGl~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~-Pf~~~~--~-~~~~  219 (379)
                      ++.+||+|||++....... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|.. ||....  . ..+.
T Consensus       303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~  381 (501)
T PHA03210        303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGY-CEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL  381 (501)
T ss_pred             CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCC-CcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence            9999999999997654322 22335679999999999988776 489999999999999999875 453322  1 1222


Q ss_pred             HHHHhc---------------------cc-----CCC-----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          220 KKINAA---------------------EF-----SCP-----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       220 ~~i~~~---------------------~~-----~~p-----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.+...                     .+     .++     ..++.++.++|.+||+.||.+|||+.|++.||||...
T Consensus       382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence            111110                     00     000     1246678889999999999999999999999999753

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=7.9e-43  Score=325.90  Aligned_cols=255  Identities=27%  Similarity=0.419  Sum_probs=210.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RTKVYI   86 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~~~~l   86 (379)
                      ++|+..+.||.|++|.||++.+..++..+|+|.+......  .....+.+|+++++.++||||+++++++..  .+.+|+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   78 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI   78 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence            4799999999999999999999999999999998754322  345678999999999999999999998864  447899


Q ss_pred             EEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           87 ILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ||||++|++|.+++..    ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  158 (287)
T cd06621          79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS  158 (287)
T ss_pred             EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence            9999999999887643    346899999999999999999999999999999999999999999999999998654332


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcc-cCCC------
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-----LPTLYKKINAAE-FSCP------  230 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~~~-~~~p------  230 (379)
                        ......++..|+|||.+.+..+ +.++|||||||++|+|++|..||....     .......+.... ...+      
T Consensus       159 --~~~~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd06621         159 --LAGTFTGTSFYMAPERIQGKPY-SITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNG  235 (287)
T ss_pred             --ccccccCCccccCHHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCC
Confidence              1224457889999999977665 489999999999999999999997652     223333333211 1111      


Q ss_pred             CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          231 FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ...++.+.++|.+||..||.+|||+.|+++||||+...
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         236 IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             CchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence            12467899999999999999999999999999996543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.6e-43  Score=325.30  Aligned_cols=249  Identities=24%  Similarity=0.411  Sum_probs=213.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .-++|++++.||.|+||.||+|.+.. +..+|+|++.....   .....+.+|+.+++.++||||+++++++......++
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI   79 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence            34679999999999999999999987 89999999876432   234578899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      ||||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence            99999999999999753  4689999999999999999999999999999999999999999999999999876543322


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                      ......++..|+|||++.+..+ +.++||||||+++|+|++ |..||...+.......+... ....|..+++++.+++.
T Consensus       160 ~~~~~~~~~~~~~PE~~~~~~~-~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  238 (261)
T cd05148         160 LSSDKKIPYKWTAPEAASHGTF-STKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIML  238 (261)
T ss_pred             cccCCCCceEecCHHHHccCCC-CchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHH
Confidence            2223345678999999977655 489999999999999998 89999887766666665543 34556778999999999


Q ss_pred             HccCCCCCCCCChHhHhc
Q 016991          243 KILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~  260 (379)
                      +||+.||.+|||+.+|++
T Consensus       239 ~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         239 ECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHcCCCchhCcCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.5e-43  Score=321.58  Aligned_cols=243  Identities=27%  Similarity=0.455  Sum_probs=203.8

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||+|+||.||+|.+..+|..||+|.+....  .......+.+|+.+++.++||||+++++++......|+||||++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence            46999999999999999999999999875432  2334567899999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc--ccccc
Q 016991           95 ELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL--HTTCG  171 (379)
Q Consensus        95 ~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~--~~~~g  171 (379)
                      +|.+++...+ .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++..........  ....+
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  158 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI  158 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence            9999987644 68999999999999999999999999999999999999999999999999987543221110  11123


Q ss_pred             CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh-cccCCCCCCCHhHHHHHHHccCCCC
Q 016991          172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINA-AEFSCPFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       172 t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~li~~~L~~dP  249 (379)
                      +..|+|||.+.+..+ +.++|||||||++|+|++ |.+||...+.......+.. .....|..++..+.+|+.+||+.||
T Consensus       159 ~~~y~aPE~~~~~~~-~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (252)
T cd05084         159 PVKWTAPEALNYGRY-SSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDP  237 (252)
T ss_pred             ceeecCchhhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCCh
Confidence            456999999876665 589999999999999997 9999987665554444433 2445666789999999999999999


Q ss_pred             CCCCChHhHhc
Q 016991          250 KTRIRIEGIRK  260 (379)
Q Consensus       250 ~~R~s~~~il~  260 (379)
                      ++|||+.++++
T Consensus       238 ~~Rps~~~~~~  248 (252)
T cd05084         238 GQRPSFSTVHQ  248 (252)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=5.3e-43  Score=323.11  Aligned_cols=251  Identities=24%  Similarity=0.354  Sum_probs=213.0

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++.+.||+|+||+||+|.+..+   ...||||.+....  .......+.+|+.+++.++||||+++++.+...+..
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV   80 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence            46799999999999999999998654   4589999886543  233446788899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +++|||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus        81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence            9999999999999998764 478999999999999999999999999999999999999999999999999988764322


Q ss_pred             cccc--ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHH
Q 016991          164 ELLH--TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATS  239 (379)
Q Consensus       164 ~~~~--~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~  239 (379)
                      ....  ...+++.|+|||.+.+..+ +.++||||||+++|+|++ |..||...........+... ....|...++.+.+
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~-~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  239 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKF-TSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQ  239 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCC-ccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            2211  2234578999999977665 489999999999999997 99999887776666666544 33556678999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcC
Q 016991          240 LIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.+||+.+|++||++.+++++
T Consensus       240 li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         240 LMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.2e-43  Score=326.67  Aligned_cols=252  Identities=21%  Similarity=0.267  Sum_probs=209.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      .-++|++.+.||+|+||.||.|.+.     .++..||||++....  .......+.+|+.+++.++||||+++++++...
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~   81 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   81 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            3468999999999999999999865     245789999885432  222345688999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEe
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG----------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~----------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                      ...++||||+++++|.+++....          .++...+..++.|++.||.|||+.|++||||||+||++++++.++|+
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~  161 (277)
T cd05062          82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG  161 (277)
T ss_pred             CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence            99999999999999999986532          35677889999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-c
Q 016991          152 DFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-F  227 (379)
Q Consensus       152 DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~  227 (379)
                      |||++........  ......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.... .
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05062         162 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF-TTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL  240 (277)
T ss_pred             CCCCccccCCcceeecCCCCccCHhhcChhHhhcCCc-CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            9999865433211  1122345778999999977655 589999999999999998 799998887766666554443 3


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..|..+++.+.+++.+||+.||++|||+.+++++
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            5566788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=3e-43  Score=329.91  Aligned_cols=254  Identities=27%  Similarity=0.463  Sum_probs=214.3

Q ss_pred             eeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 016991           12 EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        12 ~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      +....||+|+||.||++.+..+|+.||||.+....   ......+.+|+.+++.++||||+++++.+...+..|++|||+
T Consensus        23 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   99 (292)
T cd06657          23 DNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL   99 (292)
T ss_pred             hhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence            33467999999999999999999999999875432   234467889999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccccc
Q 016991           92 TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG  171 (379)
Q Consensus        92 ~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~g  171 (379)
                      ++++|.+++. .+.+++..++.++.|++.||+|||+.|++||||+|+||+++.++.++|+|||++..............|
T Consensus       100 ~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  178 (292)
T cd06657         100 EGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVG  178 (292)
T ss_pred             CCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccccc
Confidence            9999988764 467899999999999999999999999999999999999999999999999987654433222344568


Q ss_pred             CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHHHHHHccCCC
Q 016991          172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       172 t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      ++.|+|||.+.+..+ +.++|+||+||++|+|++|..||.+.+.......+....   ......+++.+.+++.+||+.|
T Consensus       179 ~~~y~~pE~~~~~~~-~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~  257 (292)
T cd06657         179 TPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRD  257 (292)
T ss_pred             CccccCHHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCC
Confidence            899999999876555 589999999999999999999998776655444443221   2223347899999999999999


Q ss_pred             CCCCCChHhHhcCccccccCCC
Q 016991          249 PKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       249 P~~R~s~~~il~hp~f~~~~~~  270 (379)
                      |.+||++.+++.||||.+...+
T Consensus       258 P~~R~~~~~ll~~~~~~~~~~~  279 (292)
T cd06657         258 PAQRATAAELLKHPFLAKAGPP  279 (292)
T ss_pred             cccCcCHHHHhcChHHhccCCC
Confidence            9999999999999999887643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=3.9e-43  Score=327.59  Aligned_cols=255  Identities=29%  Similarity=0.480  Sum_probs=219.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .-..|++.+.||.|++|.||.|.+..++..||+|++.....    ..+.+.+|+.+++.++|+||+++++.+...+..|+
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   92 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV   92 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence            44579999999999999999999998999999999875432    34678899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ++||++|++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.........
T Consensus        93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence            999999999999998876 8999999999999999999999999999999999999999999999999987654433223


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCHhHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTGATSLIH  242 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~  242 (379)
                      .....+++.|+|||++.+..+ +.++|+||+||++|+|++|..||...+.......+.....   ..+..++.++.++|.
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~-~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDY-GPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN  251 (286)
T ss_pred             hccccCCcccCCHhHhcCCCC-CCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHH
Confidence            334567889999999877665 4899999999999999999999987665544444433222   122337889999999


Q ss_pred             HccCCCCCCCCChHhHhcCccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +||+.+|.+|||+.+++.||||..
T Consensus       252 ~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         252 KCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHhccChhhCcCHHHHhhChHhhc
Confidence            999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-43  Score=327.43  Aligned_cols=252  Identities=32%  Similarity=0.486  Sum_probs=211.0

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TKVYIIL   88 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~~~lv~   88 (379)
                      |++.+.||.|+||.||+|.+..+|+.+|+|.+.... ........+.+|+.+++.++|||++++++++...  +..|+|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   79 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF   79 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence            788999999999999999999999999999997654 2233446688899999999999999999999988  8999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-cc
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-LL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-~~  166 (379)
                      ||+++ +|.+.+... ..+++..++.++.||+.||+|||+.|++|+||+|+||++++++.++|+|||++........ ..
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~  158 (287)
T cd07840          80 EYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADY  158 (287)
T ss_pred             ccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccc
Confidence            99964 888888665 5799999999999999999999999999999999999999999999999999876544321 22


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------------
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------------  227 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------------  227 (379)
                      ....++..|+|||.+.+....+.++||||+|+++|+|++|+.||...+.......+....-                   
T Consensus       159 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T cd07840         159 TNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENL  238 (287)
T ss_pred             cccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhc
Confidence            3446788999999887655456899999999999999999999988776544443322100                   


Q ss_pred             ----C--------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          228 ----S--------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       228 ----~--------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                          .        +...+++++.++|.+||..||.+||+++++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         239 KPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             cccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                0        011138889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.4e-43  Score=333.06  Aligned_cols=251  Identities=21%  Similarity=0.320  Sum_probs=209.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcE----EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~----vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...+|++.+.||+|+||.||+|.+..+|..    ||||++....  .....+.+.+|+.+++.++||||+++++++... 
T Consensus         5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-   81 (316)
T cd05108           5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-   81 (316)
T ss_pred             chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence            456899999999999999999998766664    8999886432  233456788999999999999999999998764 


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..++++||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence            578999999999999999774 4688999999999999999999999999999999999999999999999999986543


Q ss_pred             Cccc--ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhH
Q 016991          162 GVEL--LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~  237 (379)
                      ....  .....++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.........+... ..+.|..++.++
T Consensus       162 ~~~~~~~~~~~~~~~y~apE~~~~~~~-~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (316)
T cd05108         162 DEKEYHAEGGKVPIKWMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDV  240 (316)
T ss_pred             CCcceeccCCccceeecChHHhccCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHH
Confidence            2221  122334668999999977666 489999999999999997 99999887766555444333 334567789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+++.+||..||.+||++.+++.+
T Consensus       241 ~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         241 YMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=5.1e-43  Score=325.44  Aligned_cols=251  Identities=23%  Similarity=0.325  Sum_probs=210.7

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      -++|.+.+.||+|+||.||+|.+..     ++..||+|.+....  .......+.+|+.+++.++|+||+++++++.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~   82 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL   82 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence            4679999999999999999999987     77899999875432  2223456888999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEee
Q 016991           83 KVYIILEFVTGGELFDKIVHQG-------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSD  152 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~-------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~D  152 (379)
                      ..|+||||++|++|.+++...+       .+++..+..++.||+.||.|||++|++||||||+||+++.++   .+||+|
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d  162 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD  162 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence            9999999999999999997653       488899999999999999999999999999999999998765   599999


Q ss_pred             eccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccC
Q 016991          153 FGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFS  228 (379)
Q Consensus       153 fGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~  228 (379)
                      ||++........  ......++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ...
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~  241 (277)
T cd05036         163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIF-TSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLD  241 (277)
T ss_pred             CccccccCCccceecCCCCCccHhhCCHHHHhcCCc-CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC
Confidence            999876532211  1112233567999999977665 589999999999999997 99999887776666555433 345


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .|..++..+.+++.+||+.||++|||+.++++|
T Consensus       242 ~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         242 PPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            567789999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.2e-42  Score=316.25  Aligned_cols=249  Identities=33%  Similarity=0.529  Sum_probs=214.3

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||.|++|.||++.+..++..+++|++.....   .....+.+|+.+++.++||||+++++.+......++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e   77 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME   77 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence            58899999999999999999999999999999876443   345788999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           90 FVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        90 ~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |++|++|.+++... ..+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||.+........ ...
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~  156 (253)
T cd05122          78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-RNT  156 (253)
T ss_pred             cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-ccc
Confidence            99999999998776 5899999999999999999999999999999999999999999999999999876554322 345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-ccCCC--CCCCHhHHHHHHHcc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-EFSCP--FWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p--~~~s~~~~~li~~~L  245 (379)
                      ..|+..|+|||.+....+ +.++|+||+|+++|+|++|..||...+.......+... ....+  ..++..+.++|.+||
T Consensus       157 ~~~~~~~~~PE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  235 (253)
T cd05122         157 MVGTPYWMAPEVINGKPY-DYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCL  235 (253)
T ss_pred             eecCCcccCHHHHcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHc
Confidence            678899999999976554 58999999999999999999999877544333333222 22222  234889999999999


Q ss_pred             CCCCCCCCChHhHhcCcc
Q 016991          246 DPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~  263 (379)
                      +.||++|||+.++++|||
T Consensus       236 ~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         236 QKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             cCChhhCCCHHHHhcCCC
Confidence            999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.8e-43  Score=335.68  Aligned_cols=258  Identities=26%  Similarity=0.403  Sum_probs=210.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----   81 (379)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++.+... .....+.+.+|+.+++.++||||+++++++...     
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE   93 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence            34789999999999999999999999999999999875432 222345678899999999999999999988543     


Q ss_pred             -CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 -TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 -~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                       ...|++++++ |++|.+.+.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        94 ~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~  171 (345)
T cd07877          94 FNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD  171 (345)
T ss_pred             cccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence             4578888887 7888877654 579999999999999999999999999999999999999999999999999987543


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--------------  226 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--------------  226 (379)
                      .   ......|++.|+|||++.+....+.++||||+||++|+|++|+.||...+.......+....              
T Consensus       172 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (345)
T cd07877         172 D---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  248 (345)
T ss_pred             c---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccH
Confidence            2   22345688999999998764445689999999999999999999997665443332221100              


Q ss_pred             ---------cCCC--------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          227 ---------FSCP--------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       227 ---------~~~p--------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                               ...|        ...++++.++|.+||+.||.+||++.+++.||||+....+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~  309 (345)
T cd07877         249 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP  309 (345)
T ss_pred             hHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence                     0001        1257889999999999999999999999999999875544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=7.6e-43  Score=360.78  Aligned_cols=151  Identities=30%  Similarity=0.572  Sum_probs=141.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++.+.||.|+||.||+|.+..+++.||||++.+...........+.+|+.+++.++||||+++++++.....+|+
T Consensus         2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEE
Confidence            36899999999999999999999999999999999987665555566789999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      ||||+.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999999999888889999999999999999999999999999999999999999999999999874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=8.1e-43  Score=319.14  Aligned_cols=251  Identities=27%  Similarity=0.489  Sum_probs=219.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+....... .....+.+|+.+++.++||||+++++++......|+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence            5899999999999999999999999999999987644332 334667889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           90 FVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        90 ~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      |+++++|.+++.+    ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......  .
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--~  157 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--M  157 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC--C
Confidence            9999999998866    356899999999999999999999999999999999999999999999999998765543  3


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKI  244 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~  244 (379)
                      .....|++.|+|||.+.+..+ +.++|+||+|+++++|++|+.||...+.......+....+ ..+..++.++.+++.+|
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~-~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  236 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGRPY-SYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSM  236 (256)
T ss_pred             cccccCCccccCHHHHCCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHH
Confidence            344668899999999977665 4899999999999999999999998887766666655543 34556889999999999


Q ss_pred             cCCCCCCCCChHhHhcCccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f  264 (379)
                      |..+|.+|||+.++++||++
T Consensus       237 l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         237 LQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             cCCCcccCCCHHHHhcCCCC
Confidence            99999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=8.3e-43  Score=320.33  Aligned_cols=242  Identities=22%  Similarity=0.349  Sum_probs=205.5

Q ss_pred             eecccCCeEEEEEEE--CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           16 TIGEGTFAKVRFAQN--RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      .||+|+||.||+|.+  ..++..+|+|++.... ......+.+.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~   79 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL   79 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence            689999999999964  4678899999986543 233456778999999999999999999998754 567999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc---ccccc
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL---LHTTC  170 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~---~~~~~  170 (379)
                      ++|.+++...+.+++..+..++.|++.||.|||++||+||||||.||+++.++.+||+|||++.........   .....
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05116          80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGK  159 (257)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCC
Confidence            999999988788999999999999999999999999999999999999999999999999998765443221   12223


Q ss_pred             cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHccCCC
Q 016991          171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       171 gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      ++..|+|||.+....+ +.++|||||||++|+|++ |..||.+.+.......+.... ...|..+++++.++|.+||+.|
T Consensus       160 ~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~  238 (257)
T cd05116         160 WPVKWYAPECMNYYKF-SSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYG  238 (257)
T ss_pred             CCccccCHhHhccCCc-CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccC
Confidence            4578999999866554 589999999999999998 999998877777777666543 4567789999999999999999


Q ss_pred             CCCCCChHhHhc
Q 016991          249 PKTRIRIEGIRK  260 (379)
Q Consensus       249 P~~R~s~~~il~  260 (379)
                      |.+||++++|.+
T Consensus       239 p~~Rp~~~~i~~  250 (257)
T cd05116         239 VDERPGFAVVEL  250 (257)
T ss_pred             chhCcCHHHHHH
Confidence            999999999865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.9e-43  Score=321.70  Aligned_cols=247  Identities=23%  Similarity=0.395  Sum_probs=208.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|++.+....    ...+.+|+.+++.++||||+++++++...+..|+||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT   78 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence            46899999999999999999886 5678999998654322    245778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc-c
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL-L  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~-~  166 (379)
                      ||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......... .
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~  158 (256)
T cd05059          79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSS  158 (256)
T ss_pred             ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccccc
Confidence            999999999998763 46899999999999999999999999999999999999999999999999988754332111 1


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~  244 (379)
                      ....++..|+|||.+.+..+ +.++||||+|+++|+|++ |..||...+.......+... ....|...++++.+++.+|
T Consensus       159 ~~~~~~~~y~~Pe~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  237 (256)
T cd05059         159 QGTKFPVKWAPPEVFDYSRF-SSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSC  237 (256)
T ss_pred             CCCCCCccccCHHHhccCCC-CchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHH
Confidence            11123357999999977665 489999999999999998 89999877766666665544 3455667899999999999


Q ss_pred             cCCCCCCCCChHhHhcC
Q 016991          245 LDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       245 L~~dP~~R~s~~~il~h  261 (379)
                      |..+|.+|||+.++++.
T Consensus       238 l~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         238 WHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             hcCChhhCcCHHHHHHH
Confidence            99999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=6.6e-43  Score=329.64  Aligned_cols=254  Identities=24%  Similarity=0.380  Sum_probs=212.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRE-------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHE   76 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~   76 (379)
                      +...++|.+++.||+|+||.||+|.+..       ++..+|+|.+....  .......+.+|+.+++.+ +||||+++++
T Consensus        14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~   91 (307)
T cd05098          14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLG   91 (307)
T ss_pred             eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence            3455899999999999999999998643       23579999987542  223346788899999999 7999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcE
Q 016991           77 VLASRTKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENL  140 (379)
Q Consensus        77 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NI  140 (379)
                      ++...+..|+||||+++|+|.+++....                .++..++..++.|++.||+|||++|++||||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            9999999999999999999999997642                478889999999999999999999999999999999


Q ss_pred             EEccCCCeEEeeeccccCCCCCcccccc--cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 016991          141 LLDSYGNLKVSDFGLSALPQQGVELLHT--TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT  217 (379)
Q Consensus       141 ll~~~~~lkl~DfGl~~~~~~~~~~~~~--~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~  217 (379)
                      +++.++.+||+|||++...........+  ..+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+...
T Consensus       172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~~~g~~p~~~~~~~~  250 (307)
T cd05098         172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEE  250 (307)
T ss_pred             EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC-CcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence            9999999999999998755432111112  224568999999977655 589999999999999998 999998877777


Q ss_pred             HHHHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          218 LYKKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       218 ~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ....+.... ...|..++.++.+||.+||..+|.+|||+.+++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         251 LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            666665543 35667789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=7.7e-43  Score=327.66  Aligned_cols=249  Identities=24%  Similarity=0.357  Sum_probs=207.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCc--EEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ++|++.+.||+|+||.||+|....++.  .+++|.+...  ......+.+.+|+.+++++ +||||+++++++...+..|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence            689999999999999999999987765  4688877532  2233446788999999999 7999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeE
Q 016991           86 IILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLK  149 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lk  149 (379)
                      +++||+++++|.+++....                .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence            9999999999999996532                478899999999999999999999999999999999999999999


Q ss_pred             EeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-cc
Q 016991          150 VSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EF  227 (379)
Q Consensus       150 l~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~  227 (379)
                      |+|||++........ ......+..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ..
T Consensus       160 l~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~-~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~  237 (297)
T cd05089         160 IADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVY-TTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM  237 (297)
T ss_pred             ECCcCCCccccceec-cCCCCcCccccCchhhccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC
Confidence            999999864322111 111223457999999977665 489999999999999997 99999888877766666543 23


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..|..++.++.+||.+||+.||.+|||++++++.
T Consensus       238 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         238 EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4566789999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2.9e-43  Score=328.63  Aligned_cols=255  Identities=21%  Similarity=0.320  Sum_probs=206.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .++|+..+.||+|+||.||++.+..+|..||+|.+......  .....+.+|+.++.++. ||||+++++++...+..++
T Consensus         3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI   80 (288)
T ss_pred             HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence            35678889999999999999999999999999998764432  33467889999999986 9999999999999999999


Q ss_pred             EEeccCCCChHHH---HH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           87 ILEFVTGGELFDK---IV--HQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        87 v~E~~~gg~L~~~---l~--~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +|||+.+ ++.+.   +.  ....+++..+..++.|++.||+|||+. |++||||||+||+++.++.++|+|||++....
T Consensus        81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            9999854 44433   22  236799999999999999999999975 99999999999999999999999999986543


Q ss_pred             CCcccccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhc-ccCC----CCC
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAA-EFSC----PFW  232 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~-~~~~----p~~  232 (379)
                      .. .......|++.|+|||++.+.  ...+.++||||+||++|+|++|++||...+.. .....+... ....    +..
T Consensus       160 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd06616         160 DS-IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEERE  238 (288)
T ss_pred             cC-CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCc
Confidence            32 122344688999999999765  24468999999999999999999999765421 122222211 1122    223


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++.++.+||.+||+.||.+|||++++++||||+.
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         239 FSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            7889999999999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-44  Score=314.03  Aligned_cols=251  Identities=26%  Similarity=0.415  Sum_probs=205.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-----eCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA-----SRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~-----~~~   82 (379)
                      -+||+|.+.||+|+|+.||++.+..++..||+|.+....   .+..+...+||+..++++|||+++++++..     ...
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~   96 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH   96 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence            359999999999999999999999999999999886543   345688999999999999999999987653     334


Q ss_pred             eEEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           83 KVYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      ..|+++.|...|+|.+.+...    ..++|.++..|+.+|++||++||+..  ++||||||.|||+.+.+..+|.|||.+
T Consensus        97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCc
Confidence            599999999999999998653    36999999999999999999999998  999999999999999999999999988


Q ss_pred             cCCCCCccc------c---cccccCCCCCchhhhccCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH
Q 016991          157 ALPQQGVEL------L---HTTCGTPNYVAPEVLSNRGY--DGSAADVWSCGVILFVLMAGYLPFGETDL--PTLYKKIN  223 (379)
Q Consensus       157 ~~~~~~~~~------~---~~~~gt~~y~aPE~l~~~~~--~~~~~DiwSlGvil~~ll~g~~Pf~~~~~--~~~~~~i~  223 (379)
                      +........      +   .....|..|+|||.+.-+.+  .++++|||||||+||+|+.|..||+..-.  ..+.-.+.
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~  256 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQ  256 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeee
Confidence            754431110      0   12246889999999854433  36899999999999999999999943110  01111234


Q ss_pred             hcccCCCC--CCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          224 AAEFSCPF--WFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       224 ~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.+.+|.  .+|+.+.++|++||++||.+||++.+++.+
T Consensus       257 n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  257 NAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            44555554  389999999999999999999999999864

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-43  Score=326.18  Aligned_cols=252  Identities=33%  Similarity=0.503  Sum_probs=213.4

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      |++.+.||+|++|.||+|.+..+++.||+|++.... ......+.+.+|+.+++.++||||+++++++.+.+..|+|+||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   79 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY   79 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence            678899999999999999999999999999997654 2233446678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           91 VTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        91 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      ++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.............
T Consensus        80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (282)
T cd07829          80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE  158 (282)
T ss_pred             cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence            97 5899999876 589999999999999999999999999999999999999999999999999987665443333445


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc------------------ccCCC-
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA------------------EFSCP-  230 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~------------------~~~~p-  230 (379)
                      .++..|+|||.+.+....+.++|+||+||++++|++|.+||...+.......+...                  ...+| 
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd07829         159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK  238 (282)
T ss_pred             ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence            66788999999977645568999999999999999999999887755444333210                  00111 


Q ss_pred             ----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          231 ----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       231 ----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                +.++..+.++|.+||+.||++||++++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence                      1247789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=1.9e-42  Score=327.65  Aligned_cols=253  Identities=24%  Similarity=0.383  Sum_probs=212.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +.|...+.||+|+||+||+|.+..+|..||||++.............+.+|+.+++.++|||++++++++.+....|+||
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  100 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVM  100 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEE
Confidence            34677788999999999999999999999999997655444445567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||+. +++.+.+.. ...+++.++..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++.....    ..
T Consensus       101 e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----~~  175 (313)
T cd06633         101 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----AN  175 (313)
T ss_pred             ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC----CC
Confidence            9995 577777754 45789999999999999999999999999999999999999999999999998764322    23


Q ss_pred             ccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC--CCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS--CPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~  243 (379)
                      ...|+..|+|||++..  .+..+.++||||+||++|+|++|..||...+.......+......  ....++..+.+|+.+
T Consensus       176 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  255 (313)
T cd06633         176 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDY  255 (313)
T ss_pred             CccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence            4568899999999853  233457899999999999999999999877655444444333221  123467889999999


Q ss_pred             ccCCCCCCCCChHhHhcCccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||+.+|.+||++.+++.||||+.
T Consensus       256 ~l~~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         256 CLQKIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             HccCChhhCcCHHHHhcCcccCC
Confidence            99999999999999999999985

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=8e-43  Score=320.54  Aligned_cols=248  Identities=23%  Similarity=0.377  Sum_probs=208.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|++.+.||+|+||.||.|.+.. +..+|+|.+.....    ..+.+.+|+.+++.++||||+++++++...+..|++
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence            4679999999999999999998764 45699998865432    135688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc-
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL-  165 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~-  165 (379)
                      |||+.+++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+......... 
T Consensus        78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05113          78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS  157 (256)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence            9999999999998764 46899999999999999999999999999999999999999999999999988754332111 


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHK  243 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~  243 (379)
                      .....++..|+|||.+.+..+ +.++|||||||++|+|++ |..||...+.......+.... ...|...+..+.+++.+
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~-~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  236 (256)
T cd05113         158 SVGSKFPVRWSPPEVLLYSKF-SSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYS  236 (256)
T ss_pred             cCCCccChhhCCHHHHhcCcc-cchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            112234567999999976655 489999999999999998 999998877766666665543 33455678999999999


Q ss_pred             ccCCCCCCCCChHhHhcC
Q 016991          244 ILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~h  261 (379)
                      ||+.||.+||++.+|+.+
T Consensus       237 cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         237 CWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HcCCCcccCCCHHHHHHh
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=4.8e-43  Score=326.34  Aligned_cols=252  Identities=23%  Similarity=0.356  Sum_probs=213.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      .+.+|++.+.||+|+||.||+|.+..+     +..||||++....  .....+.+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~   80 (283)
T cd05091           3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE   80 (283)
T ss_pred             CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence            456799999999999999999987543     5789999987543  233456788999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      +..++++||+.+++|.+++...                ..+++..+..++.|++.||.|||++||+||||||+||+++++
T Consensus        81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~  160 (283)
T cd05091          81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK  160 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence            9999999999999999998532                347888899999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 016991          146 GNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI  222 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i  222 (379)
                      +.+||+|||++.......  .......+++.|+|||.+.+..+ +.++|||||||++|+|++ |..||.+.+.......+
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05091         161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI  239 (283)
T ss_pred             CceEecccccccccccchheeeccCccCCccccCHHHHhcCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            999999999987543321  11233446788999999976665 589999999999999998 89999888777777777


Q ss_pred             Hhccc-CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          223 NAAEF-SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       223 ~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..... ..|..++..+.+|+.+||+.+|.+||++.+|++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         240 RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            66543 4577789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=9.1e-43  Score=322.24  Aligned_cols=249  Identities=27%  Similarity=0.380  Sum_probs=206.4

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCc--EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------CC
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS------RT   82 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~------~~   82 (379)
                      |.+++.||+|+||.||+|.+..++.  .||+|.+.... ......+.+.+|+.+++.++||||+++++++..      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   79 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP   79 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence            4578999999999999999987775  68999886543 233445778899999999999999999997642      23


Q ss_pred             eEEEEEeccCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           83 KVYIILEFVTGGELFDKIVHQ------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      ..+++|||+.+|+|.+++...      ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence            578999999999999887432      34789999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCC
Q 016991          157 ALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFW  232 (379)
Q Consensus       157 ~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~  232 (379)
                      ........  ......+++.|+|||++.+..+ +.++||||+||++|+|++ |++||.+.+.......+.... ...+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  238 (272)
T cd05075         160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVY-TTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPD  238 (272)
T ss_pred             cccCcccceecCCcccCCcccCCHHHccCCCc-ChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            76543221  1123346778999999977655 589999999999999999 899998877766666666543 345667


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++..+.++|.+||+.||.+|||+.+++++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         239 CLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            88999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.8e-43  Score=322.89  Aligned_cols=251  Identities=21%  Similarity=0.277  Sum_probs=212.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..++|++.+.||+|+||.||+|.+...     +..||+|.+....  .......+.+|+.+++.++||||+++++++...
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   81 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG   81 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence            457899999999999999999998644     4789999986543  222345688999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEe
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG----------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~----------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                      ...|+||||+++++|.+++....          .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+
T Consensus        82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~  161 (277)
T cd05032          82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG  161 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEEC
Confidence            99999999999999999986532          36778899999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-cc
Q 016991          152 DFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EF  227 (379)
Q Consensus       152 DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~  227 (379)
                      |||++.......  .......++..|+|||.+.+..+ +.++|||||||++|+|++ |..||.+.+.....+.+... ..
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~  240 (277)
T cd05032         162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVF-TTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHL  240 (277)
T ss_pred             CcccchhhccCcccccCCCCCccccccCHHHHhcCCC-CcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCC
Confidence            999987543321  12234456788999999976655 589999999999999998 99999887777666665543 34


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..|..++.++.++|.+||+.+|++|||+.++++
T Consensus       241 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         241 DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            567778999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=3.7e-43  Score=335.74  Aligned_cols=260  Identities=30%  Similarity=0.411  Sum_probs=213.0

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC--
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR--   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~--   81 (379)
                      ....++|++.+.||+|+||.||+|.+..+|..+|||.+.+.. ........+.+|+.+++.+ +||||+++++++...  
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~   81 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND   81 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence            356789999999999999999999999999999999886532 2222345677899999999 999999999998643  


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ...|+||||+. ++|..++... .+++...+.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852          82 KDIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             ceEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence            46899999996 5898888764 788999999999999999999999999999999999999999999999999875543


Q ss_pred             Cc-----ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----------
Q 016991          162 GV-----ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-----------  225 (379)
Q Consensus       162 ~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-----------  225 (379)
                      ..     .......|++.|+|||++.+....+.++||||||+++|+|++|++||.+.........+...           
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T cd07852         160 LEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIES  239 (337)
T ss_pred             ccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            21     22334568999999999876555568999999999999999999999776544332222111           


Q ss_pred             ----------------cc----CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          226 ----------------EF----SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       226 ----------------~~----~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                      ..    .....++.++.++|.+||+.||.+|||+.++++||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         240 IKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence                            00    0112268899999999999999999999999999999864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=8.6e-43  Score=320.66  Aligned_cols=248  Identities=21%  Similarity=0.375  Sum_probs=209.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|+++++||+|+||.||+|.+. ++..||+|.+.....    ..+.+.+|+.+++.++||||+++++.+...+..|+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           4 PRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             chHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence            4578999999999999999999975 567899998764322    24678899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+++++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence            99999999999998653  4688899999999999999999999999999999999999999999999999876543211


Q ss_pred             c-ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          165 L-LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 ~-~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      . .....++..|+|||++....+ +.++|||||||++|+|++ |..||...+.......+... ..+.+..++.++.+++
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  237 (261)
T cd05072         159 TAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIM  237 (261)
T ss_pred             eccCCCccceecCCHHHhccCCC-ChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            1 122335668999999876655 589999999999999998 99999887766666555443 2334456789999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||..||++|||++++.+
T Consensus       238 ~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         238 KTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHccCCcccCcCHHHHHH
Confidence            9999999999999999865

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.8e-42  Score=328.37  Aligned_cols=254  Identities=25%  Similarity=0.389  Sum_probs=214.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ..|+..+.||+|+||.||+|.+..+|..||+|++.............+.+|+.+++.++|||++++++++......|+||
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  104 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM  104 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence            34888999999999999999999999999999987654444455677899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||+.| +|.+.+.. ...+++.++..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.....    ..
T Consensus       105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----~~  179 (317)
T cd06635         105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP----AN  179 (317)
T ss_pred             eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC----cc
Confidence            99975 77776654 46789999999999999999999999999999999999999999999999998765433    23


Q ss_pred             ccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC--CCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS--CPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~  243 (379)
                      ...|++.|+|||.+..  .+..+.++|+||+||++|+|++|..||...+.......+......  .+..+++.+.++|.+
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  259 (317)
T cd06635         180 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDS  259 (317)
T ss_pred             cccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHH
Confidence            4568899999999842  233458999999999999999999999877665555555443322  233478899999999


Q ss_pred             ccCCCCCCCCChHhHhcCcccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||+.+|.+||++.++++|||+...
T Consensus       260 ~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         260 CLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HccCCcccCcCHHHHHhChhhhcc
Confidence            999999999999999999999653

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-43  Score=325.15  Aligned_cols=252  Identities=34%  Similarity=0.501  Sum_probs=211.9

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      |++.+.||.|++|.||+|.+..+|+.+|+|.+...... ......+.+|+.+++.++||||+++++++...+..|+++||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   79 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF   79 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence            67889999999999999999999999999998764432 23456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           91 VTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        91 ~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      +++ +|.+.+.. ...+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+.............
T Consensus        80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~  158 (283)
T cd05118          80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY  158 (283)
T ss_pred             cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence            965 88887766 3589999999999999999999999999999999999999999999999999887655433233345


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------ccC--
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------EFS--  228 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------~~~--  228 (379)
                      .++..|+|||.+.+....+.++|+||+|+++|+|++|+.||...+.......+...                   ...  
T Consensus       159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05118         159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP  238 (283)
T ss_pred             cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence            68889999999977644568999999999999999999999877765444333211                   000  


Q ss_pred             ---------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 ---------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 ---------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                               ....++.++.++|.+||++||.+||++.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                     112367889999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=4.9e-43  Score=335.15  Aligned_cols=250  Identities=22%  Similarity=0.383  Sum_probs=203.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-C
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS-R   81 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~-~   81 (379)
                      ++|++.+.||+|+||.||+|....     +++.||+|++.....  ....+.+.+|+.+++.+ +||||+++++++.. .
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            489999999999999999997543     457999999864332  22346678899999999 79999999998764 4


Q ss_pred             CeEEEEEeccCCCChHHHHHhc----------------------------------------------------------
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ----------------------------------------------------------  103 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~----------------------------------------------------------  103 (379)
                      ..++++|||+++++|.+++...                                                          
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            6789999999999999988542                                                          


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--cccccccCCCCCch
Q 016991          104 ---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAP  178 (379)
Q Consensus       104 ---~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aP  178 (379)
                         ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++........  ......++..|+||
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence               2578899999999999999999999999999999999999999999999999876533211  11233456789999


Q ss_pred             hhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH-HHHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCCh
Q 016991          179 EVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT-LYKKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRI  255 (379)
Q Consensus       179 E~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~-~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~  255 (379)
                      |++.+..+. .++||||+||++|+|++ |..||.+..... ....+... ....|...++++.+++.+||+.+|.+||++
T Consensus       245 E~~~~~~~~-~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~  323 (337)
T cd05054         245 ESIFDKVYT-TQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTF  323 (337)
T ss_pred             HHhcCCCCC-ccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCH
Confidence            999887764 89999999999999998 999997754332 22333322 234566678999999999999999999999


Q ss_pred             HhHhcC
Q 016991          256 EGIRKH  261 (379)
Q Consensus       256 ~~il~h  261 (379)
                      +++++|
T Consensus       324 ~ell~~  329 (337)
T cd05054         324 SELVEI  329 (337)
T ss_pred             HHHHHH
Confidence            999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.2e-42  Score=325.43  Aligned_cols=251  Identities=20%  Similarity=0.259  Sum_probs=209.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCC----------------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETG----------------ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN   70 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~----------------~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~   70 (379)
                      ..++|++++.||+|+||.||+|.+..++                ..||+|.+.....  ....+.+.+|+.+++.++|||
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~   80 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPN   80 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCC
Confidence            3578999999999999999999887644                5689998875432  234577899999999999999


Q ss_pred             cceEEEEEEeCCeEEEEEeccCCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCc
Q 016991           71 IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-----------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPEN  139 (379)
Q Consensus        71 Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~N  139 (379)
                      |+++++++...+..+++|||+++++|.+++....           .+++..++.++.|++.||.|||+.||+||||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            9999999999999999999999999999997765           68999999999999999999999999999999999


Q ss_pred             EEEccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh--CCCCCCCCCh
Q 016991          140 LLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA--GYLPFGETDL  215 (379)
Q Consensus       140 Ill~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~--g~~Pf~~~~~  215 (379)
                      |+++.++.++|+|||++.......  .......+++.|+|||++.+..+ +.++|||||||++|+|++  |..||...+.
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~~~~~~~p~~~~~~  239 (296)
T cd05051         161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKF-TTKSDVWAFGVTLWEILTLCREQPYEHLTD  239 (296)
T ss_pred             eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCC-CccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence            999999999999999987543321  11224456778999999876554 589999999999999997  7889987665


Q ss_pred             HHHHHHHHhc--------ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          216 PTLYKKINAA--------EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       216 ~~~~~~i~~~--------~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ....+.+...        ....|..++.++.+++.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         240 QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            5554444322        12344567899999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=5.2e-43  Score=333.59  Aligned_cols=253  Identities=18%  Similarity=0.288  Sum_probs=202.9

Q ss_pred             eeeccc--CCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEG--TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G--~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      ..||+|  +||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++...+..|+|+||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            456666  9999999999999999999998764332 2345789999999999999999999999999999999999999


Q ss_pred             CCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc------
Q 016991           93 GGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE------  164 (379)
Q Consensus        93 gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~------  164 (379)
                      +++|.+++.+.  ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++++||+.+........      
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY  162 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence            99999988764  3589999999999999999999999999999999999999999999999985432211100      


Q ss_pred             -cccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---------------
Q 016991          165 -LLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---------------  227 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---------------  227 (379)
                       ......++..|+|||++.+. ...+.++||||+||++|+|++|.+||...........+.....               
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (328)
T cd08226         163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR  242 (328)
T ss_pred             cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence             01122356679999999764 2235899999999999999999999977654333222211110               


Q ss_pred             --------------------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          228 --------------------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       228 --------------------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                                      ..+..+++.+.+||++||+.||.+|||++++++||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHH
Confidence                                            01122567899999999999999999999999999997654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1.7e-42  Score=330.65  Aligned_cols=257  Identities=28%  Similarity=0.385  Sum_probs=207.8

Q ss_pred             CeeeeeeecccCCeEEEEEEECCC--CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----CC
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRET--GESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS----RT   82 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~----~~   82 (379)
                      +|++.+.||+|+||.||++.+..+  +..||||.+.... ......+.+.+|+.+++.+ +||||+++++....    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            589999999999999999999988  9999999986432 2222346678899999999 59999999987542    25


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .+|+++||+. ++|.+.+.....+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++......
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            6889999984 689999988889999999999999999999999999999999999999999999999999998754331


Q ss_pred             ----cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--------------
Q 016991          163 ----VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA--------------  224 (379)
Q Consensus       163 ----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~--------------  224 (379)
                          ........|++.|+|||++.+....+.++||||+||++|+|++|.+||...+.......+..              
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG  238 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence                11223457899999999986644446899999999999999999999987654332221110              


Q ss_pred             -c-------------ccC---CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          225 -A-------------EFS---CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       225 -~-------------~~~---~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                       .             ...   .....+..+.+++.+||+.||.+|||+.+++.|||++...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence             0             000   1112578899999999999999999999999999997543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=1.2e-42  Score=324.64  Aligned_cols=258  Identities=34%  Similarity=0.600  Sum_probs=216.7

Q ss_pred             CeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~   84 (379)
                      +|++.+.||+|+||.||++.+.   .++..||||++.+.... .....+.+.+|+.++..+ +||||+++++.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4899999999999999999864   46789999998764332 223446688999999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |+||||+++++|.+++.....+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++....... 
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            9999999999999999887889999999999999999999999999999999999999999999999999987544321 


Q ss_pred             ccccccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcccCCCCCCCHhHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEFSCPFWFSTGAT  238 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~~p~~~s~~~~  238 (379)
                      ......+|+..|+|||.+.+.. ..+.++|+||+|+++|+|++|..||...+    .....+.+.......|..+++++.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEAR  240 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHH
Confidence            1223456899999999986543 24589999999999999999999996432    233444555556677788999999


Q ss_pred             HHHHHccCCCCCCCCC---hHhHhcCcccccc
Q 016991          239 SLIHKILDPNPKTRIR---IEGIRKHPWFRKN  267 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s---~~~il~hp~f~~~  267 (379)
                      ++|.+||+.||++|||   +.++++||||+..
T Consensus       241 ~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         241 DFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             HHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            9999999999999998   5678999999753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-42  Score=321.30  Aligned_cols=249  Identities=23%  Similarity=0.341  Sum_probs=207.7

Q ss_pred             eeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK----   83 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~----   83 (379)
                      |++++.||+|+||.||.|....+   +..||||.+..... .....+.+.+|+..++.++||||+++++++.....    
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   79 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI   79 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence            67899999999999999987653   47899999875433 23345678999999999999999999998865544    


Q ss_pred             --EEEEEeccCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           84 --VYIILEFVTGGELFDKIVHQ------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        84 --~~lv~E~~~gg~L~~~l~~~------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                        .++++||+++++|..++...      ..+++..+..++.|++.||.|||++|++||||||+||++++++.+||+|||+
T Consensus        80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence              79999999999999888542      3689999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCC
Q 016991          156 SALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPF  231 (379)
Q Consensus       156 ~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~  231 (379)
                      +........  ......++..|+|||++.+..+ +.++||||+||++|+|++ |.+||.+.+.....+.+... ....|.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  238 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY-TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPE  238 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCC-CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence            875543211  1122335678999999876555 589999999999999999 99999887776666665543 445677


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .++.++.+++.+||+.||.+|||+.+++++
T Consensus       239 ~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         239 DCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=8.1e-43  Score=326.41  Aligned_cols=251  Identities=24%  Similarity=0.401  Sum_probs=211.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      .++|++.+.||+|+||.||++.+...     ...+|+|.+....  .......+.+|+.+++.+ +||||+++++++...
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            46899999999999999999998644     3789999987543  223446688999999999 799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           82 TKVYIILEFVTGGELFDKIVH----------------QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~----------------~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      +..|++|||+++|+|.+++..                .+.+++..+..++.||+.||.|||+.||+||||||+||+++.+
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~  168 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED  168 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence            999999999999999999864                2468889999999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 016991          146 GNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI  222 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i  222 (379)
                      +.+||+|||++........  ......++..|+|||++.+..+ +.++||||+||++|+|++ |..||...+.....+.+
T Consensus       169 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  247 (293)
T cd05053         169 HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL  247 (293)
T ss_pred             CeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCc-CcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            9999999999876543211  1112234567999999876655 489999999999999997 99999888877777666


Q ss_pred             Hhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          223 NAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       223 ~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .... ...|...+.++.+|+.+||..||.+|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         248 KEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            5543 34566789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.5e-42  Score=319.82  Aligned_cols=247  Identities=23%  Similarity=0.363  Sum_probs=207.0

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+..+ ..||+|++.....    ..+.+.+|+.+++.++||||+++++.+.. ...|+
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~l   77 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI   77 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEE
Confidence            357899999999999999999998765 4699999875432    12568899999999999999999998754 56899


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      ||||+++++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||.+........
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~  157 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  157 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence            99999999999999753  3578999999999999999999999999999999999999999999999999875543221


Q ss_pred             -cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          165 -LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                       ......++..|+|||++.+..+ +.++||||+||++|+|++ |..||.+.........+... ....+..++..+.+++
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~-~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  236 (262)
T cd05071         158 TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM  236 (262)
T ss_pred             ccccCCcccceecCHhHhccCCC-CchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHH
Confidence             1223346678999999876665 589999999999999999 89999887766666655443 2445566899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||++||++||++.++++
T Consensus       237 ~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         237 CQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHccCCcccCCCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=5.7e-43  Score=321.67  Aligned_cols=253  Identities=29%  Similarity=0.508  Sum_probs=213.7

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL--KHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ||.+.+.||+|+||.||++.+..++..+++|++......  .......+..|+.+++.++||||+++++.+.+....++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            699999999999999999999888887888776543221  122234577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           88 LEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +||+++++|.+.+..    ...+++.++..++.|++.||.|||+.|++|+||+|+||+++. +.++|+|||++.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999988753    357899999999999999999999999999999999999975 679999999987654443


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                      .......|++.|+|||.+.+..++ .++|+||+|+++|+|++|..||...+.......+... ....|..++.++.++|.
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~~~~~-~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKHQGYD-SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQ  238 (260)
T ss_pred             ccccCCCCCcCccCHHHHccCCCC-chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHHH
Confidence            344456688999999998766654 7899999999999999999999877666655555443 33456678899999999


Q ss_pred             HccCCCCCCCCChHhHhcCccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +||..||.+||++.++++||||
T Consensus       239 ~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         239 SMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHhcCChhhCcCHHHHhhCCCC
Confidence            9999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-42  Score=317.60  Aligned_cols=242  Identities=26%  Similarity=0.372  Sum_probs=205.1

Q ss_pred             eeecccCCeEEEEEEECCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 016991           15 RTIGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      +.||+|+||.||+|....++   ..+|+|.+......  ...+.+.+|+.+++.+.||||+++++++.. +..+++|||+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELA   77 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeC
Confidence            47999999999999876554   79999998765543  344678899999999999999999998764 5689999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc---c
Q 016991           92 TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH---T  168 (379)
Q Consensus        92 ~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~---~  168 (379)
                      ++++|.+++.....+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++...........   .
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence            9999999998888899999999999999999999999999999999999999999999999999876543322211   1


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHccC
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~  246 (379)
                      ..++..|+|||.+.+..+ +.++|||||||++|+|++ |.+||...+.......+.... ...|..+++.+.++|.+||.
T Consensus       158 ~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  236 (257)
T cd05060         158 GRWPLKWYAPECINYGKF-SSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWK  236 (257)
T ss_pred             ccccccccCHHHhcCCCC-CccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence            123457999999976665 589999999999999997 999998877766666665443 35677789999999999999


Q ss_pred             CCCCCCCChHhHhc
Q 016991          247 PNPKTRIRIEGIRK  260 (379)
Q Consensus       247 ~dP~~R~s~~~il~  260 (379)
                      +||++||++.++++
T Consensus       237 ~~p~~Rp~~~~l~~  250 (257)
T cd05060         237 YRPEDRPTFSELES  250 (257)
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999876

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-42  Score=318.85  Aligned_cols=247  Identities=22%  Similarity=0.357  Sum_probs=208.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|++.+.||+|++|.||+|.+. ++..||+|.+.....    ..+.+.+|+.+++.++||||+++++++...+..|++
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   79 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIV   79 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeee
Confidence            467999999999999999999975 457899999865432    235688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           88 LEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      |||+++++|.+++....  .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (261)
T cd05068          80 TELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE  159 (261)
T ss_pred             eecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc
Confidence            99999999999997654  6899999999999999999999999999999999999999999999999998765432111


Q ss_pred             -ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          166 -LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       166 -~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                       .....++..|+|||++.+..+ +.++||||||+++|+|++ |+.||.+.+.......+... ....+...+..+.+++.
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  238 (261)
T cd05068         160 AREGAKFPIKWTAPEAALYNRF-SIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIML  238 (261)
T ss_pred             ccCCCcCceeccCccccccCCC-CchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHH
Confidence             111122357999999876555 589999999999999999 99999887776666665443 33456668999999999


Q ss_pred             HccCCCCCCCCChHhHhc
Q 016991          243 KILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~  260 (379)
                      +||+.+|.+||++.++.+
T Consensus       239 ~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         239 DCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHhhcCcccCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.4e-42  Score=321.15  Aligned_cols=250  Identities=23%  Similarity=0.335  Sum_probs=209.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGE----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...+|++.+.||+|+||+||+|.+..+|.    .||+|++....  .....+.+.+|+.+++.++||||+++++++.. .
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~   81 (279)
T cd05109           5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT-S   81 (279)
T ss_pred             chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-C
Confidence            35689999999999999999999877776    48999886543  23344678899999999999999999999875 4


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..++++||+++|+|.+.+... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~  161 (279)
T cd05109          82 TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI  161 (279)
T ss_pred             CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence            578999999999999999764 5789999999999999999999999999999999999999999999999999876543


Q ss_pred             Cccc--ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhH
Q 016991          162 GVEL--LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~  237 (379)
                      ....  .....+++.|+|||.+.+..+ +.++|||||||++|+|++ |..||...........+.... ...+..++.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (279)
T cd05109         162 DETEYHADGGKVPIKWMALESILHRRF-THQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDV  240 (279)
T ss_pred             ccceeecCCCccchhhCCHHHhccCCC-CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHH
Confidence            2221  112234678999999977665 489999999999999998 999998777666665555432 34556789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+++.+||..||+.||++.+++.
T Consensus       241 ~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         241 YMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.3e-44  Score=344.28  Aligned_cols=251  Identities=24%  Similarity=0.456  Sum_probs=218.7

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccc-cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe--EEEEEecc
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK--VYIILEFV   91 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~--~~lv~E~~   91 (379)
                      ..||+|+|-+||+|.+..+|-.||--.+....+ ......+++..|+.+|+.|+||||+++|+.|.+..+  +.+|+|.+
T Consensus        46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~  125 (632)
T KOG0584|consen   46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF  125 (632)
T ss_pred             hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence            689999999999999999999998755544333 344566889999999999999999999999987655  88999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--CceeecCCCCcEEEcc-CCCeEEeeeccccCCCCCcccccc
Q 016991           92 TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK--GVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        92 ~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~--gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      .+|+|+.++.+.++++...++.|++||+.||.|||++  .|+|||||.+||+|+. .|.+||+|+|||+.....  ....
T Consensus       126 TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s--~aks  203 (632)
T KOG0584|consen  126 TSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS--HAKS  203 (632)
T ss_pred             cCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc--ccce
Confidence            9999999999999999999999999999999999988  4999999999999985 489999999999987664  2345


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcccC--CCCCCCHhHHHHHHHcc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET-DLPTLYKKINAAEFS--CPFWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L  245 (379)
                      .+|||.|||||++. ..|+ ..+||||||+.+.||.|+..||... +..++|+++..+..+  +..--.+++++||.+||
T Consensus       204 vIGTPEFMAPEmYE-E~Yn-E~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl  281 (632)
T KOG0584|consen  204 VIGTPEFMAPEMYE-ENYN-ELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCL  281 (632)
T ss_pred             eccCccccChHHHh-hhcc-hhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHh
Confidence            78999999999996 4565 9999999999999999999999764 566899998877543  22334899999999999


Q ss_pred             CCCCCCCCChHhHhcCccccccCCC
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      .. .+.|+|+.|+|.||||......
T Consensus       282 ~~-~~~R~sa~eLL~d~Ff~~d~g~  305 (632)
T KOG0584|consen  282 AT-KSERLSAKELLKDPFFDEDGGI  305 (632)
T ss_pred             cC-chhccCHHHHhhChhhcccccc
Confidence            99 9999999999999999876443

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.4e-42  Score=332.64  Aligned_cols=254  Identities=26%  Similarity=0.407  Sum_probs=207.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR------   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~------   81 (379)
                      ..+|.+.+.||+|+||.||+|.+..+|+.||||++.+... .......+.+|+.+++.++||||+++++++...      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~   92 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF   92 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence            4689999999999999999999999999999999875432 223345678999999999999999999998654      


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ...|+|+||+. .+|....  ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus        93 ~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~  169 (342)
T cd07879          93 QDFYLVMPYMQ-TDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA  169 (342)
T ss_pred             ceEEEEecccc-cCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC
Confidence            35699999995 4666554  34789999999999999999999999999999999999999999999999999875432


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----------------
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA----------------  225 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~----------------  225 (379)
                         ......|++.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+...                
T Consensus       170 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (342)
T cd07879         170 ---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKA  246 (342)
T ss_pred             ---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccc
Confidence               2234567889999999876544568999999999999999999999887654433322210                


Q ss_pred             -------ccCC--------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 -------EFSC--------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 -------~~~~--------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                             ....        .+..++++.+||.+||+.||.+||++++++.||||+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence                   0000        123578899999999999999999999999999998653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.6e-42  Score=318.87  Aligned_cols=247  Identities=23%  Similarity=0.369  Sum_probs=207.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+. ++..+|+|.+......    .+.+.+|+.+++.++||||+++++++. ....|+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~l   77 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYI   77 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEE
Confidence            4568999999999999999999876 5677999998764432    256889999999999999999999885 456899


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+++++|.+++...  ..+++..+..++.|++.||.|||++|++||||||+||++++++.++|+|||++........
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05070          78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence            99999999999998753  3589999999999999999999999999999999999999999999999999876543211


Q ss_pred             -cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          165 -LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                       ......++..|+|||++.+..+ +.++||||||+++|+|++ |.+||.+.+.......+... ....|...+..+.+|+
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (260)
T cd05070         158 TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELM  236 (260)
T ss_pred             ccccCCCCCccccChHHHhcCCC-cchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHH
Confidence             1122235567999999876555 589999999999999999 99999887766666666543 4456677899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||.+||.+|||+.++.+
T Consensus       237 ~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         237 LQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HHHcccCcccCcCHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.1e-42  Score=339.38  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=205.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||.||+|.+...     +..||||++....  .....+.+.+|+.+++.+. ||||+++++++..
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~  112 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK  112 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence            356888999999999999999987533     3479999986543  2333467899999999996 9999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc---------------------------------------------------------
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ---------------------------------------------------------  103 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~---------------------------------------------------------  103 (379)
                      .+.+|+|||||++|+|.+++...                                                         
T Consensus       113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (400)
T cd05105         113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML  192 (400)
T ss_pred             CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence            99999999999999999988642                                                         


Q ss_pred             ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc
Q 016991          104 ---------------------------------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS  144 (379)
Q Consensus       104 ---------------------------------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~  144 (379)
                                                             ..+++..+..++.||+.||.|||+.||+||||||+|||++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~  272 (400)
T cd05105         193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ  272 (400)
T ss_pred             hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence                                                   13677888899999999999999999999999999999999


Q ss_pred             CCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHHH
Q 016991          145 YGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP-TLYK  220 (379)
Q Consensus       145 ~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~-~~~~  220 (379)
                      ++.+||+|||++........  ......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||...... ..+.
T Consensus       273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~  351 (400)
T cd05105         273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLY-TTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN  351 (400)
T ss_pred             CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCC-CchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH
Confidence            99999999999875433211  1223456788999999977665 589999999999999997 99999775443 3333


Q ss_pred             HHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          221 KINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       221 ~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+... ....|..++.++.+++.+||+.||++|||+.++.+
T Consensus       352 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         352 KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            33332 34456678999999999999999999999998776

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=2.6e-42  Score=318.81  Aligned_cols=250  Identities=26%  Similarity=0.399  Sum_probs=209.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++++.||+|+||.||+|.+..++.   .+|+|.+.....  ....+.+.+|+.+++.++||||+++++++...+..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (267)
T cd05066           3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV   80 (267)
T ss_pred             HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            4689999999999999999999875544   799998865332  23456789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++++|.+++... +.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence            9999999999999999764 468999999999999999999999999999999999999999999999999987654422


Q ss_pred             ccccc---cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHH
Q 016991          164 ELLHT---TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGAT  238 (379)
Q Consensus       164 ~~~~~---~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  238 (379)
                      .....   ..++..|+|||.+.+..+ +.++|+|||||++|++++ |..||.+.+.......+... ..+.+..+++.+.
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALH  239 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCcc-CchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHH
Confidence            21111   123467999999977665 589999999999999886 99999887766665555543 2344556789999


Q ss_pred             HHHHHccCCCCCCCCChHhHhc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +++.+||+.+|.+||++.++++
T Consensus       240 ~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         240 QLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHHHcccCchhCCCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=2.1e-42  Score=318.06  Aligned_cols=247  Identities=24%  Similarity=0.396  Sum_probs=207.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .-++|+++++||+|+||.||+|... ++..||+|.+......    .+.+.+|+.+++.++||||+++++++. .+..|+
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYI   77 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEE
Confidence            4568999999999999999999865 5788999998754322    357889999999999999999999874 457899


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      +|||+.+++|.+++...  ..+++.++..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++....... 
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05067          78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY  157 (260)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence            99999999999988653  368899999999999999999999999999999999999999999999999987554221 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......++..|+|||++....+ +.++||||+|+++|+|++ |++||.+.+.......+... ....|...+.++.++|
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (260)
T cd05067         158 TAREGAKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELM  236 (260)
T ss_pred             ccccCCcccccccCHHHhccCCc-CcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            11123345678999999976655 589999999999999998 99999888776666655443 3345666889999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||..+|++|||+++++.
T Consensus       237 ~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         237 RLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHccCChhhCCCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-42  Score=316.20  Aligned_cols=244  Identities=26%  Similarity=0.471  Sum_probs=211.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ...+|++.+.||.|+||.||+|...  |+.||+|.+.....    ..+++.+|+.+++.++|+||+++++++...+..|+
T Consensus         4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence            3568999999999999999999875  88999999865432    35678899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      ||||+++++|.+++....  .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+........
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~  157 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD  157 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence            999999999999997765  689999999999999999999999999999999999999999999999999876533211


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                         ...++..|+|||.+....+ +.++||||||+++++|++ |..||...+...+...+... ....|..+++++.++|.
T Consensus       158 ---~~~~~~~~~ape~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  233 (256)
T cd05039         158 ---SGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMK  233 (256)
T ss_pred             ---cCCCcccccCchhhcCCcC-CcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHH
Confidence               3334567999999876554 589999999999999997 99999888777666655443 33456678999999999


Q ss_pred             HccCCCCCCCCChHhHhc
Q 016991          243 KILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~  260 (379)
                      +||..+|.+|||++++++
T Consensus       234 ~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         234 DCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHhccChhhCcCHHHHHH
Confidence            999999999999999886

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2.8e-42  Score=322.82  Aligned_cols=250  Identities=23%  Similarity=0.340  Sum_probs=210.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..++|.+.+.||+|+||.||+|.+.     .++..+++|.+....   ....+.+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (291)
T cd05094           3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDG   79 (291)
T ss_pred             chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence            4568999999999999999999854     345678999875432   22346788999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      +..++||||+++++|.+++...+                .+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence            99999999999999999997542                37899999999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 016991          146 GNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI  222 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i  222 (379)
                      +.++|+|||++.......  .......|+..|+|||++.+..+ +.++||||+||++|+|++ |..||...+.....+.+
T Consensus       160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  238 (291)
T cd05094         160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKF-TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECI  238 (291)
T ss_pred             CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            999999999987543321  11233456788999999977665 489999999999999998 99999887776666666


Q ss_pred             Hhccc-CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          223 NAAEF-SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       223 ~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..... ..+..++..+.+++.+||+.||++|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         239 TQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             hCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            55443 345567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-42  Score=321.29  Aligned_cols=250  Identities=31%  Similarity=0.432  Sum_probs=206.0

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCe----
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVRLHEVLASRTK----   83 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l---~hp~Iv~l~~~~~~~~~----   83 (379)
                      |++.+.||.|+||.||+|.+..++..||+|++..... .......+.+|+.+++.+   +||||+++++++...+.    
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            7889999999999999999998999999999975432 222334566788777666   59999999999988776    


Q ss_pred             -EEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           84 -VYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        84 -~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                       ++++|||+.+ +|.+++....  .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus        80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838          80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence             9999999964 7888887643  58999999999999999999999999999999999999999999999999987654


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-----cC-------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-----FS-------  228 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-----~~-------  228 (379)
                      .. .......++..|+|||++.+..+ +.++|+||+||++|+|++|.+||.+.+......++....     ..       
T Consensus       159 ~~-~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07838         159 FE-MALTSVVVTLWYRAPEVLLQSSY-ATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL  236 (287)
T ss_pred             CC-cccccccccccccChHHhccCCC-CCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence            33 22234457889999999977665 589999999999999999999998877665554443210     00       


Q ss_pred             ---------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 ---------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 ---------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                                     ....+++.+.++|.+||+.||.+||+++++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                           001246778899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=8.9e-44  Score=363.16  Aligned_cols=255  Identities=28%  Similarity=0.477  Sum_probs=208.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      ...+|+.+..||+||||.||+++++-+|..||||.|....  .......+.+|+.+|.+|+|||||++|..|.+..    
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~  554 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT  554 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence            3567888999999999999999999999999999997754  4445678999999999999999999987652110    


Q ss_pred             --------------------------------------------------------------------------------
Q 016991           83 --------------------------------------------------------------------------------   82 (379)
Q Consensus        83 --------------------------------------------------------------------------------   82 (379)
                                                                                                      
T Consensus       555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS  634 (1351)
T KOG1035|consen  555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS  634 (1351)
T ss_pred             cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------------eEEEEEeccCCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHH
Q 016991           83 -----------------------------------KVYIILEFVTGGELFDKIVHQGRL-LENDCRRYFQQLIDAVAHCH  126 (379)
Q Consensus        83 -----------------------------------~~~lv~E~~~gg~L~~~l~~~~~l-~e~~~~~~~~qil~~l~ylH  126 (379)
                                                         .+||-||||+...+.+++..+... ....+|++|+||+.||.|+|
T Consensus       635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH  714 (1351)
T KOG1035|consen  635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH  714 (1351)
T ss_pred             ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence                                               489999999988887777765544 47889999999999999999


Q ss_pred             HCCceeecCCCCcEEEccCCCeEEeeeccccCCC----C--------------CcccccccccCCCCCchhhhccCC--C
Q 016991          127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ----Q--------------GVELLHTTCGTPNYVAPEVLSNRG--Y  186 (379)
Q Consensus       127 ~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~----~--------------~~~~~~~~~gt~~y~aPE~l~~~~--~  186 (379)
                      ++|||||||||.||++|+++.+||+|||+++...    .              +.......+||.-|+|||++.+..  .
T Consensus       715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~  794 (1351)
T KOG1035|consen  715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK  794 (1351)
T ss_pred             hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence            9999999999999999999999999999987611    0              112345678999999999998766  3


Q ss_pred             CCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhcccCCCCCC----CHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          187 DGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYKKINAAEFSCPFWF----STGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       187 ~~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~----s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.|+|+|||||||+||+   .||+... .......+..+.++.|..+    -+...++|++||+.||++||||.|+|++
T Consensus       795 Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  795 YNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             ccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence            469999999999999998   4564332 2344555565555555221    2445789999999999999999999999


Q ss_pred             ccccc
Q 016991          262 PWFRK  266 (379)
Q Consensus       262 p~f~~  266 (379)
                      .||..
T Consensus       872 ~llpp  876 (1351)
T KOG1035|consen  872 ELLPP  876 (1351)
T ss_pred             cCCCc
Confidence            99973

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=2.4e-42  Score=326.11  Aligned_cols=255  Identities=25%  Similarity=0.372  Sum_probs=212.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ..+|+..+.||+|+||.||+|++..++..+|+|.+.............+.+|+.+++.++|||++++++++......|+|
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   93 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence            34688889999999999999999999999999998754433444556788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+. |++.+.+.. ...+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++......    
T Consensus        94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----  168 (308)
T cd06634          94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----  168 (308)
T ss_pred             EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc----
Confidence            99996 577776654 456899999999999999999999999999999999999999999999999988654332    


Q ss_pred             cccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-C-CCCCCCHhHHHHHH
Q 016991          167 HTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-S-CPFWFSTGATSLIH  242 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~-~p~~~s~~~~~li~  242 (379)
                      ....|++.|+|||.+.+  .+..+.++|||||||++|+|++|..||...+.......+..... . .+..++..+.+||.
T Consensus       169 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  248 (308)
T cd06634         169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVD  248 (308)
T ss_pred             ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHH
Confidence            24568899999999853  23345799999999999999999999977655443333333322 2 23357889999999


Q ss_pred             HccCCCCCCCCChHhHhcCcccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +||..+|.+||+++++++|||+...
T Consensus       249 ~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         249 SCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             HHhhCCcccCCCHHHHhhCcccccc
Confidence            9999999999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=4.3e-42  Score=325.21  Aligned_cols=251  Identities=23%  Similarity=0.385  Sum_probs=209.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE-------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVL   78 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~   78 (379)
                      ..++|.+++.||+|+||.||+|.+..       .+..+|+|.+....  .......+.+|+.+++.+ +||||+++++++
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~   87 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVC   87 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEE
Confidence            45689999999999999999998642       34579999886532  223456788999999999 699999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE
Q 016991           79 ASRTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL  142 (379)
Q Consensus        79 ~~~~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll  142 (379)
                      ...+..|++|||+++|+|.+++...                ..++...+..++.||+.||.|||++|++||||||+||++
T Consensus        88 ~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill  167 (314)
T cd05099          88 TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV  167 (314)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE
Confidence            9999999999999999999999753                247888899999999999999999999999999999999


Q ss_pred             ccCCCeEEeeeccccCCCCCccc--ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 016991          143 DSYGNLKVSDFGLSALPQQGVEL--LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLY  219 (379)
Q Consensus       143 ~~~~~lkl~DfGl~~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~  219 (379)
                      +.++.+||+|||++.........  .....++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.....
T Consensus       168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  246 (314)
T cd05099         168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY-THQSDVWSFGILMWEIFTLGGSPYPGIPVEELF  246 (314)
T ss_pred             cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCc-CccchhhHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            99999999999998765432111  122234567999999977655 589999999999999998 99999888777766


Q ss_pred             HHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          220 KKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       220 ~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..+.... ...|..++.++.+++.+||..||++|||+.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         247 KLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            6665543 3456678899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=3.9e-42  Score=323.89  Aligned_cols=252  Identities=25%  Similarity=0.361  Sum_probs=208.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLA   79 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~   79 (379)
                      ...++|++.+.||+|+||.||+|.+     ..++..||+|.+....  .....+.+.+|+.+++++ +||||+++++.+.
T Consensus        32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  109 (302)
T cd05055          32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACT  109 (302)
T ss_pred             ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence            3456899999999999999999975     3456689999886543  223446789999999999 7999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      ..+..|++|||+++|+|.+++....  .+++.++..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus       110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~  189 (302)
T cd05055         110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR  189 (302)
T ss_pred             cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence            9999999999999999999987543  38999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH-HHhc-ccCCCCC
Q 016991          158 LPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKK-INAA-EFSCPFW  232 (379)
Q Consensus       158 ~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~-i~~~-~~~~p~~  232 (379)
                      .......  ......+++.|+|||.+.+..+ +.++||||+||++|+|++ |..||.+......... +... ....|..
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVY-TFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEH  268 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCC-CcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCC
Confidence            5443211  1122345678999999977665 589999999999999998 9999987665443333 3222 2334566


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .++++.+++.+||+++|.+|||+.++++
T Consensus       269 ~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         269 APAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            8999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=4.9e-42  Score=327.03  Aligned_cols=258  Identities=27%  Similarity=0.453  Sum_probs=210.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-RTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~~~~~   85 (379)
                      .-++|++.+.||.|+||.||+|.+..+|..||||.+.+... .....+.+.+|+.+++.++||||+++++++.. ....|
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            35689999999999999999999999999999998865432 22344678899999999999999999999865 56799


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +++||+ +++|.+.+. ..++++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++.....   .
T Consensus        87 lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~---~  161 (328)
T cd07856          87 FVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP---Q  161 (328)
T ss_pred             EEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC---C
Confidence            999998 668877665 36788999999999999999999999999999999999999999999999999875432   2


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh---------------------
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA---------------------  224 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~---------------------  224 (379)
                      .....+++.|+|||++.+....+.++||||+||++|+|++|+.||...+.......+..                     
T Consensus       162 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (328)
T cd07856         162 MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRF  241 (328)
T ss_pred             cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHH
Confidence            23456788999999986644456899999999999999999999977654322111110                     


Q ss_pred             ---c--ccCCC-----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          225 ---A--EFSCP-----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       225 ---~--~~~~p-----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                         .  ....|     +.+++++.++|.+||+.+|.+|||+++++.||||.....+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         242 VQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             HhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence               0  00111     2467899999999999999999999999999999765444

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=4.3e-42  Score=321.28  Aligned_cols=248  Identities=24%  Similarity=0.346  Sum_probs=207.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+.....  ......+.+|+.+++.++||||+++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence            58899999999999999998753     235789898865432  22346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcE
Q 016991           85 YIILEFVTGGELFDKIVHQ------------------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENL  140 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~------------------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NI  140 (379)
                      |+++||+.+++|.+++...                        ..+++..+..++.|++.||.|||+.||+||||||+||
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni  158 (290)
T cd05045          79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV  158 (290)
T ss_pred             EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence            9999999999999988642                        2477888999999999999999999999999999999


Q ss_pred             EEccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 016991          141 LLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT  217 (379)
Q Consensus       141 ll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~  217 (379)
                      ++++++.+||+|||++........  ......++..|+|||.+.+..+ +.++||||||+++++|++ |..||.+.....
T Consensus       159 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~  237 (290)
T cd05045         159 LVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIY-TTQSDVWSFGVLLWEIVTLGGNPYPGIAPER  237 (290)
T ss_pred             EEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCc-chHhHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            999999999999999875433211  1223346678999999876655 589999999999999998 999998877766


Q ss_pred             HHHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          218 LYKKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       218 ~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +...+... ....|..++.++.+++.+||++||.+||++.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         238 LFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            66555432 34456778999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=4.4e-42  Score=319.77  Aligned_cols=249  Identities=22%  Similarity=0.343  Sum_probs=209.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ..+|.+.+.||+|+||.||++...     .++..+|+|.+...   .......+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   80 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTEGR   80 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC
Confidence            357889999999999999999743     35678999987543   2334567999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG---------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN  147 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~---------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~  147 (379)
                      ..+++|||+++++|.+++...+               .+++..+..++.||+.||.|||++|++||||||+||++++++.
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~  160 (280)
T cd05092          81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLV  160 (280)
T ss_pred             ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCC
Confidence            9999999999999999987643               4788999999999999999999999999999999999999999


Q ss_pred             eEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q 016991          148 LKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINA  224 (379)
Q Consensus       148 lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~  224 (379)
                      +||+|||++.......  .......+++.|+|||.+.+..+ +.++|||||||++|+|++ |.+||...+.......+..
T Consensus       161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  239 (280)
T cd05092         161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF-TTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQ  239 (280)
T ss_pred             EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCc-CchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHc
Confidence            9999999986443221  11223345678999999977665 489999999999999998 9999987776655555544


Q ss_pred             c-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          225 A-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       225 ~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      . ....|..+++.+.++|.+||+.||.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         240 GRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            3 34556778999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2e-42  Score=321.75  Aligned_cols=250  Identities=32%  Similarity=0.481  Sum_probs=207.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEe
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      |++.+.||.|++|+||+|....+++.||||.+........  .....+|+..++.++ ||||+++++++..++..|+|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchh--HHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            7889999999999999999999999999998865432211  133457899999999 9999999999999999999999


Q ss_pred             ccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           90 FVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |+ +|+|.+.+....  .+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++...... ....
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~-~~~~  156 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR-PPYT  156 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC-CCcC
Confidence            99 889999887764  7899999999999999999999999999999999999999999999999998765432 2223


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------ccC
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------EFS  228 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------~~~  228 (379)
                      ...|+..|+|||++......+.++|+||+|+++++|++|++||...+......++...                   ...
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07830         157 DYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFR  236 (283)
T ss_pred             CCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence            4568889999999865554568999999999999999999999877654443332210                   000


Q ss_pred             C-----------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          229 C-----------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       229 ~-----------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .           ....++++.++|.+||+.||.+|||++|++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         237 FPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence            0           11236789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=5.6e-42  Score=315.39  Aligned_cols=247  Identities=25%  Similarity=0.382  Sum_probs=205.9

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|++|.||+|.+..+ ..+|+|.+.....    ..+.+.+|+.+++.++|||++++++++.. +..|+
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   77 (260)
T cd05069           4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYI   77 (260)
T ss_pred             ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEE
Confidence            457899999999999999999988655 4699998765432    23567889999999999999999998754 56899


Q ss_pred             EEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+.+++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++++++.++|+|||++........
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence            999999999999997643  478899999999999999999999999999999999999999999999999875533211


Q ss_pred             -cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          165 -LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                       ......++..|+|||.+.+..+ +.++||||+||++|+|++ |.+||.+.........+... ....|..++..+.+++
T Consensus       158 ~~~~~~~~~~~y~~Pe~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (260)
T cd05069         158 TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELM  236 (260)
T ss_pred             cccCCCccchhhCCHHHhccCCc-ChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHH
Confidence             1122345678999999876554 589999999999999999 99999887766666655443 3345667899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      ++||.+||.+||+++++++
T Consensus       237 ~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         237 KLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHccCCcccCcCHHHHHH
Confidence            9999999999999999876

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=4.9e-42  Score=314.86  Aligned_cols=243  Identities=25%  Similarity=0.438  Sum_probs=206.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEE-EeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVL-ASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~-~~~~~~~   85 (379)
                      .+.+|++.+.||+|+||.||++...  |..||+|.+....     ..+.+.+|+.+++.++|+|++++++++ ...+..|
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   76 (256)
T cd05082           4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY   76 (256)
T ss_pred             cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceE
Confidence            3568999999999999999999775  7889999885432     235688999999999999999999975 4567899


Q ss_pred             EEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           86 IILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      ++|||+++++|.+++...+  .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~  156 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  156 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence            9999999999999987654  47899999999999999999999999999999999999999999999999987543321


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                         ....++..|+|||++.+..+ +.++|||||||++|+|++ |++||...+.......+... ....+..+++.+.+++
T Consensus       157 ---~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  232 (256)
T cd05082         157 ---DTGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVM  232 (256)
T ss_pred             ---CCCccceeecCHHHHccCCC-CchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence               23345668999999977665 489999999999999997 99999888777666666544 2345667899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||++|||+.++++
T Consensus       233 ~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         233 KQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHhcCChhhCcCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=4.5e-42  Score=323.41  Aligned_cols=254  Identities=22%  Similarity=0.383  Sum_probs=212.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEEC-------CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNR-------ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHE   76 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~   76 (379)
                      .....+|++.+.||+|+||.||+|+..       .++..||+|.+....  .....+.+.+|+.+++.+ +||||+++++
T Consensus        11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   88 (304)
T cd05101          11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG   88 (304)
T ss_pred             cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence            345678999999999999999999753       234589999886532  223456789999999999 8999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcE
Q 016991           77 VLASRTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENL  140 (379)
Q Consensus        77 ~~~~~~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NI  140 (379)
                      ++......|++|||+++++|.+++...                ..++...+..++.||+.||.|||++||+||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            999999999999999999999999763                2467788899999999999999999999999999999


Q ss_pred             EEccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH
Q 016991          141 LLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT  217 (379)
Q Consensus       141 ll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~  217 (379)
                      +++.++.+||+|||++........  ......+++.|+|||++.+..+ +.++||||||+++|+|++ |..||.+.+...
T Consensus       169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  247 (304)
T cd05101         169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  247 (304)
T ss_pred             EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCC-CchhhHHHHHHHHHHHHcCCCCCcccCCHHH
Confidence            999999999999999875543211  1223345678999999977665 488999999999999998 899998888877


Q ss_pred             HHHHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          218 LYKKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       218 ~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ....+.... ...|..++.++.++|.+||.++|.+|||+.++++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         248 LFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            777765443 34566789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=6.5e-42  Score=318.55  Aligned_cols=250  Identities=19%  Similarity=0.306  Sum_probs=207.0

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcE----EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~----vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ..++|++.+.||+|+||+||+|.+..+|..    +++|.+....  .......+..|+..++.++||||+++++++.. .
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~   81 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A   81 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence            457899999999999999999999877774    6667664321  22334677888889999999999999998754 5


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..++++||+++|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            578999999999999999764 5789999999999999999999999999999999999999999999999999875433


Q ss_pred             Ccc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhH
Q 016991          162 GVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~  237 (379)
                      ...  ......++..|+|||.+.+..+ +.++||||+||++|+|++ |..||.+.......+.+.... ...|..++.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~-~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALESILFGRY-THQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDV  240 (279)
T ss_pred             CCcccccCCCCCcccccCHHHhccCCc-CchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHH
Confidence            211  2233456778999999976665 589999999999999998 999998877666555555443 34455678899


Q ss_pred             HHHHHHccCCCCCCCCChHhHhc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+++.+|+..||++|||+.++++
T Consensus       241 ~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         241 YMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHH
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-42  Score=322.41  Aligned_cols=250  Identities=21%  Similarity=0.304  Sum_probs=204.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCC--------------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcce
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETG--------------ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR   73 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~--------------~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~   73 (379)
                      ..+|++.+.||+|+||.||++++..++              ..||+|.+....  .......+.+|+++++.++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~   81 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR   81 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence            458999999999999999999876432              358999986542  2334567899999999999999999


Q ss_pred             EEEEEEeCCeEEEEEeccCCCChHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEE
Q 016991           74 LHEVLASRTKVYIILEFVTGGELFDKIVHQG------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLL  141 (379)
Q Consensus        74 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIl  141 (379)
                      +++++...+..++||||+++++|.+++....            .+++..+..++.|++.||.|||++|++||||||+||+
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil  161 (295)
T cd05097          82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL  161 (295)
T ss_pred             EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence            9999999999999999999999999886532            3678889999999999999999999999999999999


Q ss_pred             EccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh--CCCCCCCCChHH
Q 016991          142 LDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA--GYLPFGETDLPT  217 (379)
Q Consensus       142 l~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~--g~~Pf~~~~~~~  217 (379)
                      ++.++.+||+|||++.......  .......++..|+|||++.+..+ +.++|||||||++|+|++  |..||...+...
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~  240 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF-TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ  240 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCc-CchhhHHHHHHHHHHHHHcCCCCCCcccChHH
Confidence            9999999999999987543321  11122345678999999877665 589999999999999988  678998766554


Q ss_pred             HHHHHHh--------cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          218 LYKKINA--------AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       218 ~~~~i~~--------~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ....+..        .....+..+++.+.+|+.+||+.||.+|||++++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         241 VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            4433321        112235557899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=7.5e-42  Score=314.34  Aligned_cols=241  Identities=24%  Similarity=0.378  Sum_probs=201.4

Q ss_pred             eecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           16 TIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      .||+|+||.||+|.+.  .++..||+|++....  .....+.+.+|+.+++.++||||+++++++.. ...++||||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence            4899999999999775  446679999986543  23345678999999999999999999998764 578999999999


Q ss_pred             CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc---ccc
Q 016991           94 GELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL---HTT  169 (379)
Q Consensus        94 g~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~---~~~  169 (379)
                      ++|.+++.. ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++..........   ...
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            999998875 4578999999999999999999999999999999999999999999999999987544322111   112


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccCC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      .+++.|+|||++....+ +.++|||||||++|+|++ |..||.+.........+... ...+|...++++.++|.+|+..
T Consensus       159 ~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~  237 (257)
T cd05115         159 KWPLKWYAPECINFRKF-SSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIY  237 (257)
T ss_pred             CCCcccCCHHHHccCCC-CchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            23568999999876655 589999999999999996 99999887776666655543 3556778899999999999999


Q ss_pred             CCCCCCChHhHhc
Q 016991          248 NPKTRIRIEGIRK  260 (379)
Q Consensus       248 dP~~R~s~~~il~  260 (379)
                      ||++||++.++.+
T Consensus       238 ~~~~Rp~~~~i~~  250 (257)
T cd05115         238 KWEDRPNFAKVEE  250 (257)
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.7e-42  Score=314.15  Aligned_cols=248  Identities=23%  Similarity=0.371  Sum_probs=210.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+. ++..||||.+.....    ..+.+.+|+.+++.++||||+++++++......++
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEE
Confidence            3568999999999999999999976 457899999875432    23568899999999999999999999999899999


Q ss_pred             EEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      +|||+++++|.+++....  .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....... 
T Consensus        79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY  158 (261)
T ss_pred             EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence            999999999999997643  68999999999999999999999999999999999999999999999999987554311 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......++..|+|||.+.+..+ +.++|+||+||++|+|++ |+.||.+.+.......+... ....|...+.++.+++
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  237 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRF-TIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLM  237 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCc-CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            11112234568999999976554 589999999999999998 99999887776666666543 3455666789999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||..||.+||+++++.+
T Consensus       238 ~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         238 LQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHcccCcccCCCHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=4.7e-42  Score=322.07  Aligned_cols=259  Identities=26%  Similarity=0.394  Sum_probs=208.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~   83 (379)
                      ....++|++.+.||.|+||.||+|.+..++..||||.+.+....  .....+.+|+.++.... ||||+++++++.+...
T Consensus        11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~   88 (296)
T cd06618          11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD   88 (296)
T ss_pred             cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence            34568899999999999999999999999999999998754322  22345666777666665 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           84 VYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      .|++|||+. +.+.+.+.. .+.+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++.....
T Consensus        89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~  167 (296)
T cd06618          89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD  167 (296)
T ss_pred             EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence            999999984 466666654 4578999999999999999999997 5999999999999999999999999999865433


Q ss_pred             CcccccccccCCCCCchhhhccCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcc-cCCCC--CCC
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRG---YDGSAADVWSCGVILFVLMAGYLPFGETDL-PTLYKKINAAE-FSCPF--WFS  234 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~~-~~~p~--~~s  234 (379)
                      ... .....+++.|+|||.+.+..   ..+.++||||+|+++|+|++|+.||..... ......+.... ...+.  .++
T Consensus       168 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (296)
T cd06618         168 SKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFS  246 (296)
T ss_pred             CCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCC
Confidence            211 12345788999999986542   235789999999999999999999976432 23333333222 22222  368


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .++.+||.+||..||.+||+++++++||||+..
T Consensus       247 ~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         247 PDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence            899999999999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-43  Score=310.01  Aligned_cols=256  Identities=25%  Similarity=0.389  Sum_probs=208.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +++.+++..||.|+.|.|++++.+.+|...|||.+.+..  ..+..+++...+.++..-+ .|+||+.+++|..+..+++
T Consensus        91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~I  168 (391)
T KOG0983|consen   91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFI  168 (391)
T ss_pred             hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHH
Confidence            345667788999999999999999999999999987654  3445578888888876654 8999999999999999999


Q ss_pred             EEeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      .||.|.- .+..++. -.++++|..+-.+...++.||.||.+ +||+|||+||+|||+|+.|++||||||.+....... 
T Consensus       169 cMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-  246 (391)
T KOG0983|consen  169 CMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-  246 (391)
T ss_pred             HHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc-
Confidence            9999842 3333332 24689999999999999999999985 589999999999999999999999999987655432 


Q ss_pred             cccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccc-CCCC--CCCHhHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEF-SCPF--WFSTGAT  238 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~-~~p~--~~s~~~~  238 (379)
                      ......|.+.|||||.+.-.  ..+.-.+||||||+.|+||.+|+.||.+.+.. +...++...+. .+|.  .+|+.+.
T Consensus       247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~  326 (391)
T KOG0983|consen  247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQ  326 (391)
T ss_pred             ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHH
Confidence            22345699999999998532  22347999999999999999999999885433 45555555443 3333  3899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +|+..||..|+.+||...++|+|||+...
T Consensus       327 ~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  327 SFVKDCLTKDHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             HHHHHHhhcCcccCcchHHHhcCcceeec
Confidence            99999999999999999999999999754

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3.1e-42  Score=330.37  Aligned_cols=251  Identities=23%  Similarity=0.382  Sum_probs=203.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS-   80 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~-   80 (379)
                      -++|++++.||+|+||.||+|.+     ..+++.||||++.....  ......+.+|+.++..+ +||||+++++++.. 
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~   83 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKP   83 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence            35899999999999999999984     35678999999865432  22346788999999999 68999999998764 


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc---------------------------------------------------------
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ---------------------------------------------------------  103 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~---------------------------------------------------------  103 (379)
                      ...++++|||+++|+|.+++...                                                         
T Consensus        84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (343)
T cd05103          84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  163 (343)
T ss_pred             CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence            45689999999999999998643                                                         


Q ss_pred             ----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--ccccccc
Q 016991          104 ----------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCG  171 (379)
Q Consensus       104 ----------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~g  171 (379)
                                ..++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........  ......+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  243 (343)
T cd05103         164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL  243 (343)
T ss_pred             hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence                      1357778889999999999999999999999999999999999999999999875433211  1122345


Q ss_pred             CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHHHHHH-hcccCCCCCCCHhHHHHHHHccCCC
Q 016991          172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP-TLYKKIN-AAEFSCPFWFSTGATSLIHKILDPN  248 (379)
Q Consensus       172 t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~-~~~~~i~-~~~~~~p~~~s~~~~~li~~~L~~d  248 (379)
                      +..|+|||++.+..+ +.++||||||+++|+|++ |..||...... .....+. ......|.+.++++.+++.+||+.|
T Consensus       244 ~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~  322 (343)
T cd05103         244 PLKWMAPETIFDRVY-TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE  322 (343)
T ss_pred             CcceECcHHhcCCCC-CchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence            677999999977665 489999999999999997 99999775433 2222222 2334567778999999999999999


Q ss_pred             CCCCCChHhHhcC
Q 016991          249 PKTRIRIEGIRKH  261 (379)
Q Consensus       249 P~~R~s~~~il~h  261 (379)
                      |.+|||+.+|++|
T Consensus       323 p~~Rps~~eil~~  335 (343)
T cd05103         323 PSQRPTFSELVEH  335 (343)
T ss_pred             hhhCcCHHHHHHH
Confidence            9999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.6e-42  Score=319.30  Aligned_cols=246  Identities=30%  Similarity=0.495  Sum_probs=204.1

Q ss_pred             eeeeeecccCCeEEEEEEEC----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           12 EVGRTIGEGTFAKVRFAQNR----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        12 ~~~~~LG~G~~g~V~~a~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .+.+.||.|+||.||+|...    ..+..|+||++...  ......+.+.+|+..++.++||||+++++++...+..++|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv   79 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV   79 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence            46789999999999999987    45678999999442  2333468899999999999999999999999988889999


Q ss_pred             EeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--c
Q 016991           88 LEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--V  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--~  163 (379)
                      +||+++|+|.+++...  ..+++.....++.||+.||.|||+++++|+||+|+||+++.++.+||+|||++......  .
T Consensus        80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999886  68999999999999999999999999999999999999999999999999998765221  1


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li  241 (379)
                      .......+...|+|||.+.+..+ +.++||||||+++|||++ |+.||.+.+.......+.... ...|..++..+.++|
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~-~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  238 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEY-TKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLI  238 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEE-SHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHH
T ss_pred             ccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHH
Confidence            22234456778999999977665 589999999999999999 789998888777777765443 445667899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||..||.+|||+.+|++
T Consensus       239 ~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  239 QQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHT-SSGGGS--HHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHh
Confidence            9999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=8.4e-42  Score=315.61  Aligned_cols=250  Identities=26%  Similarity=0.385  Sum_probs=210.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++.+.||+|+||.||+|.+..++.   .||||++....  .......+..|+.+++.++||||+++++++......
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~   80 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV   80 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence            5679999999999999999999987765   69999986532  233457799999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      ++||||+++++|.+++... +.+++.+++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence            9999999999999988753 568999999999999999999999999999999999999999999999999886543321


Q ss_pred             c--cccccc---cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHh
Q 016991          164 E--LLHTTC---GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTG  236 (379)
Q Consensus       164 ~--~~~~~~---gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~  236 (379)
                      .  ......   .+..|+|||.+.+..+ +.++||||+||++|+|++ |..||...+.......+... ..+.|..++..
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTA  239 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcc-cchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHH
Confidence            1  111111   2357999999977666 489999999999999886 99999887776666665433 23445667899


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +.+++.+||..+|.+||++.+++.
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         240 LHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=6.8e-42  Score=319.50  Aligned_cols=251  Identities=25%  Similarity=0.360  Sum_probs=210.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..++|++.+.||+|+||.||+|.+.     .++..||+|++....  .......+.+|+.+++.++||||+++++++...
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~   80 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG   80 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            3468999999999999999999875     367899999986543  233446788999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCc
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG----------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPEN  139 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~----------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~N  139 (379)
                      ...|+++||+++++|.+++....                      .+++..+..++.||+.||.|||++|++||||||+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n  160 (288)
T cd05050          81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN  160 (288)
T ss_pred             CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence            99999999999999999997432                      36788889999999999999999999999999999


Q ss_pred             EEEccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 016991          140 LLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP  216 (379)
Q Consensus       140 Ill~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~  216 (379)
                      |+++.++.++|+|||++.......  .......++..|+|||.+.+..+ +.++|||||||++|+|++ |..||.+.+..
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~~~~~p~~~~~~~  239 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRY-TTESDVWAYGVVLWEIFSYGMQPYYGMAHE  239 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            999999999999999886443211  11122334667999999877665 489999999999999997 88999887777


Q ss_pred             HHHHHHHhccc-CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          217 TLYKKINAAEF-SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       217 ~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +....+..... ..|..++.++.+||.+||+.||.+|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         240 EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            76666655543 456678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=1.5e-42  Score=315.28  Aligned_cols=229  Identities=29%  Similarity=0.463  Sum_probs=194.7

Q ss_pred             cCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCChHHH
Q 016991           20 GTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDK   99 (379)
Q Consensus        20 G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~   99 (379)
                      |++|+||++++..+|+.||+|.+.+..        ...+|...+....||||+++++++...+..|++|||++||+|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            899999999999999999999986643        123445555566799999999999999999999999999999999


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchh
Q 016991          100 IVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE  179 (379)
Q Consensus       100 l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE  179 (379)
                      +.....+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||.+......   .....++..|+|||
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~~y~aPE  152 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVENMYCAPE  152 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCccccCCc
Confidence            988888999999999999999999999999999999999999999999999999987544332   23445677899999


Q ss_pred             hhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCCh----
Q 016991          180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI----  255 (379)
Q Consensus       180 ~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~----  255 (379)
                      .+....+ +.++|+||+||++|+|++|+.||.......    -......+|.++++.+.++|.+||+.||++|+++    
T Consensus       153 ~~~~~~~-~~~~DvwslG~il~el~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~  227 (237)
T cd05576         153 VGGISEE-TEACDWWSLGAILFELLTGKTLVECHPSGI----NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAG  227 (237)
T ss_pred             ccCCCCC-CchhhHHHHHHHHHHHHHCcchhhcCchhc----ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccc
Confidence            9866555 589999999999999999999885432211    0112345778899999999999999999999986    


Q ss_pred             -HhHhcCccc
Q 016991          256 -EGIRKHPWF  264 (379)
Q Consensus       256 -~~il~hp~f  264 (379)
                       +++++||||
T Consensus       228 ~~~~~~h~~~  237 (237)
T cd05576         228 VEDIKSHPFF  237 (237)
T ss_pred             hHHHHcCCCC
Confidence             999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.4e-41  Score=313.82  Aligned_cols=250  Identities=26%  Similarity=0.366  Sum_probs=209.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ..+|+..+.||+|+||.||+|.+..++.   .+|+|.+....  .....+.+.+|+.+++.++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA   81 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence            4578999999999999999999876665   79999886542  222346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++++|.+++... +.+++.++..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++.......
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  161 (268)
T cd05063          82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP  161 (268)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence            9999999999999998754 578999999999999999999999999999999999999999999999999987554322


Q ss_pred             cccc---ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHH
Q 016991          164 ELLH---TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGAT  238 (379)
Q Consensus       164 ~~~~---~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  238 (379)
                      ....   ....+..|+|||++.+..+ +.++||||+||++|+|++ |..||...+.......+... ..+.+..++.++.
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  240 (268)
T cd05063         162 EGTYTTSGGKIPIRWTAPEAIAYRKF-TSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVY  240 (268)
T ss_pred             ccceeccCCCcCceecCHHHhhcCCc-ChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHH
Confidence            1111   1123457999999977665 589999999999999997 99999887776666666543 2334445789999


Q ss_pred             HHHHHccCCCCCCCCChHhHhc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +++.+|++.+|..||++.++++
T Consensus       241 ~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         241 QLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHHHcCCCcccCcCHHHHHH
Confidence            9999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.6e-41  Score=315.56  Aligned_cols=250  Identities=24%  Similarity=0.344  Sum_probs=212.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGE----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ..++|++.+.||+|+||.||+|.+..+|.    .+|+|.+.....  ......+.+|+.+++.++||||+++++++.. .
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   81 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-S   81 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence            35789999999999999999999877765    589998765532  3345678899999999999999999999887 7


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..++++||+++|+|.+++... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            899999999999999998764 4689999999999999999999999999999999999999999999999999876543


Q ss_pred             Ccccc--cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhH
Q 016991          162 GVELL--HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~~~--~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~  237 (379)
                      .....  ....++..|+|||.+....+ +.++|+||+||++|++++ |..||.+.......+.+.... ...|...+.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILHRIY-THKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDV  240 (279)
T ss_pred             cccceecCCCcccccccCHHHhhcCCc-CchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHH
Confidence            22211  11223567999999876655 489999999999999998 999999888777776666543 45666788999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+++.+||..||..||++.++++
T Consensus       241 ~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         241 YMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-41  Score=315.41  Aligned_cols=242  Identities=24%  Similarity=0.366  Sum_probs=200.9

Q ss_pred             eeecccCCeEEEEEEECCCCc--EEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecc
Q 016991           15 RTIGEGTFAKVRFAQNRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~--~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      +.||+|+||.||+|.+..++.  .+|+|.+....  .....+.+.+|+.+++++ +||||+++++++...+..|++|||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            468999999999999988876  45888775322  233446788999999999 7999999999999999999999999


Q ss_pred             CCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           92 TGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        92 ~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                      ++++|.+++....                .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||+
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl  158 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  158 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence            9999999987543                478899999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCC
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWF  233 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~  233 (379)
                      +....... .......+..|+|||++....+ +.++|||||||++|+|++ |..||.+.+.....+.+... ....|..+
T Consensus       159 ~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~-~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  236 (270)
T cd05047         159 SRGQEVYV-KKTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNC  236 (270)
T ss_pred             ccccchhh-hccCCCCccccCChHHHccCCC-CchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcC
Confidence            85332211 1112234567999999876555 589999999999999997 99999887777766666443 23455567


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +.++.+++.+|+..||.+|||+.++++
T Consensus       237 ~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         237 DDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=4.8e-42  Score=324.46  Aligned_cols=247  Identities=20%  Similarity=0.337  Sum_probs=197.7

Q ss_pred             CCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCChHHHH
Q 016991           21 TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI  100 (379)
Q Consensus        21 ~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  100 (379)
                      ++|.||.+++..+|..||||++..... .....+.+.+|+.+++.++||||+++++++...+..|++|||+++++|.+++
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l   90 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL   90 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence            445666777777999999999976532 2335678999999999999999999999999999999999999999999998


Q ss_pred             Hhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-------cccccccc
Q 016991          101 VHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-------ELLHTTCG  171 (379)
Q Consensus       101 ~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-------~~~~~~~g  171 (379)
                      ...  ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+||+|||.+.......       .......+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (314)
T cd08216          91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK  170 (314)
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence            753  468999999999999999999999999999999999999999999999999875432211       11233457


Q ss_pred             CCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhc------------------------
Q 016991          172 TPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL-YKKINAA------------------------  225 (379)
Q Consensus       172 t~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~-~~~i~~~------------------------  225 (379)
                      +..|+|||++... ...+.++|+||+||++|+|++|..||........ ...+...                        
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (314)
T cd08216         171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN  250 (314)
T ss_pred             cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence            7889999998653 2235899999999999999999999976543322 1222110                        


Q ss_pred             ---------ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 ---------EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 ---------~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                               ....+..++.++.+|+.+||..||++|||++++++||||+...
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence                     0001112456788999999999999999999999999997543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=9.7e-42  Score=319.95  Aligned_cols=249  Identities=21%  Similarity=0.323  Sum_probs=203.1

Q ss_pred             cCeeeeeeecccCCeEEEEEEECC----------------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcc
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRE----------------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV   72 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~----------------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv   72 (379)
                      ++|++.+.||+|+||.||++.+..                ++..||+|++....  .......+.+|+.+++.++||||+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence            579999999999999999986532                34578999986542  233456789999999999999999


Q ss_pred             eEEEEEEeCCeEEEEEeccCCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEE
Q 016991           73 RLHEVLASRTKVYIILEFVTGGELFDKIVHQG-----------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLL  141 (379)
Q Consensus        73 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~-----------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIl  141 (379)
                      ++++++...+..|++|||+++++|.+++....           .+++..+..++.||+.||.|||+.|++||||||+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil  162 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL  162 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence            99999999999999999999999999987642           3667789999999999999999999999999999999


Q ss_pred             EccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh--CCCCCCCCChHH
Q 016991          142 LDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA--GYLPFGETDLPT  217 (379)
Q Consensus       142 l~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~--g~~Pf~~~~~~~  217 (379)
                      ++.++.++|+|||++.......  .......+++.|+|||+.....+ +.++|||||||++|+|++  |..||...+...
T Consensus       163 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~  241 (296)
T cd05095         163 VGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKF-TTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ  241 (296)
T ss_pred             EcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCc-cchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence            9999999999999987543321  11122344678999998876655 589999999999999998  789997766544


Q ss_pred             HHHHHH--------hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          218 LYKKIN--------AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       218 ~~~~i~--------~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ......        ......|..+++.+.+|+.+||+.||.+||++.++.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         242 VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            433221        1122345567899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=8.4e-42  Score=316.49  Aligned_cols=251  Identities=24%  Similarity=0.357  Sum_probs=211.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      .++|++.+.||+|+||.||+|..+.     +...||+|.+....  .....+.+.+|+.+++.++||||+++++++...+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   81 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE   81 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence            4689999999999999999999754     34689999876533  2224567899999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeee
Q 016991           83 KVYIILEFVTGGELFDKIVHQG---------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDF  153 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~---------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~Df  153 (379)
                      ..|+||||+++++|.+++....         .+++..+..++.||+.||.|||+.||+||||||+||+++.++.++++||
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence            9999999999999999997655         6899999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCC-cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccc--CC
Q 016991          154 GLSALPQQG-VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEF--SC  229 (379)
Q Consensus       154 Gl~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~--~~  229 (379)
                      |++...... ........++..|+|||.+.+..+ +.++||||||+++|+|++ |..||...........+.....  ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  240 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDF-STKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV  240 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCC
Confidence            987643221 112233456778999999876655 488999999999999998 8999987766666666654443  34


Q ss_pred             CCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +..++..+.+++.+||+.||.+|||+.+++..
T Consensus       241 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         241 PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            55688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.4e-41  Score=310.97  Aligned_cols=247  Identities=26%  Similarity=0.394  Sum_probs=211.1

Q ss_pred             eeeeeeecccCCeEEEEEEECCCC----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETG----ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +++.+.||.|+||.||++.+..++    ..||+|++.....  ....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   78 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI   78 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence            467899999999999999998766    8999999865432  2245788999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~--l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+++++|.+++.....  +++.++..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........
T Consensus        79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence            9999999999999976544  99999999999999999999999999999999999999999999999999876544311


Q ss_pred             ccc-ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHH
Q 016991          165 LLH-TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLI  241 (379)
Q Consensus       165 ~~~-~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li  241 (379)
                      ... ...+++.|+|||.+.+..+ +.++|+||+|+++++|++ |.+||...+.....+.+.... ...+...+.++.+++
T Consensus       159 ~~~~~~~~~~~y~~Pe~~~~~~~-~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  237 (258)
T smart00219      159 YKKKGGKLPIRWMAPESLKDGKF-TSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLM  237 (258)
T ss_pred             cccccCCCcccccChHHhccCCC-CcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHH
Confidence            111 1236789999999865544 589999999999999998 899998877777776665543 345667899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||..||.+|||+.++++
T Consensus       238 ~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      238 LQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHCcCChhhCcCHHHHHh
Confidence            9999999999999999886

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-43  Score=337.24  Aligned_cols=234  Identities=24%  Similarity=0.417  Sum_probs=207.4

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      ++-||.|+.|.||+|+..  ++.||||.++.          .-..+|+-|+.|+||||+.+.++|.....++||||||..
T Consensus       129 LeWlGSGaQGAVF~Grl~--netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~  196 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQ  196 (904)
T ss_pred             hhhhccCcccceeeeecc--CceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccc
Confidence            466999999999999986  79999996632          123578899999999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCC
Q 016991           94 GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP  173 (379)
Q Consensus        94 g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~  173 (379)
                      |-|...++....++......|..+|+.|++|||.+.|||||||.-||||..+..+||+|||-+...... ...-..+||.
T Consensus       197 GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-STkMSFaGTV  275 (904)
T KOG4721|consen  197 GQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK-STKMSFAGTV  275 (904)
T ss_pred             ccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-hhhhhhhhhH
Confidence            999999999999999999999999999999999999999999999999999999999999987654432 3344678999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHHHHHHccCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATSLIHKILDPNPKT  251 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~  251 (379)
                      .|||||++.+.+.. .|+||||+||||||||+|+.||.+-+...+..-+...  .++.|..++..++=||+.|++-.|.+
T Consensus       276 aWMAPEvIrnePcs-EKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRN  354 (904)
T KOG4721|consen  276 AWMAPEVIRNEPCS-EKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRN  354 (904)
T ss_pred             hhhCHHHhhcCCcc-cccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCC
Confidence            99999999887765 9999999999999999999999887766655554443  35667889999999999999999999


Q ss_pred             CCChHhHhcC
Q 016991          252 RIRIEGIRKH  261 (379)
Q Consensus       252 R~s~~~il~h  261 (379)
                      ||++.+|+.|
T Consensus       355 RPSFrqil~H  364 (904)
T KOG4721|consen  355 RPSFRQILLH  364 (904)
T ss_pred             CccHHHHHHH
Confidence            9999999998

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.6e-42  Score=317.36  Aligned_cols=239  Identities=25%  Similarity=0.292  Sum_probs=198.7

Q ss_pred             eeecccCCeEEEEEEECCCCcE-------EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           15 RTIGEGTFAKVRFAQNRETGES-------VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~-------vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +.||.|+||.||+|.+..++..       +|+|.+....   ....+.+.+|+.+++.++||||+++++++......++|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence            4699999999999998765544       8888875432   23446788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC--------eEEeeeccccC
Q 016991           88 LEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN--------LKVSDFGLSAL  158 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~--------lkl~DfGl~~~  158 (379)
                      |||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.        ++++|||++..
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            99999999999997644 5899999999999999999999999999999999999987765        69999998764


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhcccCCCCCCCHhH
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPTLYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  237 (379)
                      ...    .....+++.|+|||++.+....+.++||||+||++|+|++| .+||...+..... .+.......|...+.++
T Consensus       158 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  232 (258)
T cd05078         158 VLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLPAPKWTEL  232 (258)
T ss_pred             cCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCCCCCcHHH
Confidence            432    23456888999999997755556899999999999999998 5777655544332 23344556677778999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .++|.+||+.||.+|||+++|++.
T Consensus       233 ~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         233 ANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHhccChhhCCCHHHHHHh
Confidence            999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.2e-41  Score=312.06  Aligned_cols=242  Identities=26%  Similarity=0.432  Sum_probs=205.3

Q ss_pred             eeecccCCeEEEEEEECC-CCc--EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 016991           15 RTIGEGTFAKVRFAQNRE-TGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~-~~~--~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      +.||+|++|.||+|.+.. .+.  .||||.+......  ...+.+.+|+.+++.++||||+++++++.. ...++++||+
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence            468999999999999865 333  6999999775543  456789999999999999999999999988 8999999999


Q ss_pred             CCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc---c
Q 016991           92 TGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL---L  166 (379)
Q Consensus        92 ~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~---~  166 (379)
                      ++++|.+++....  .+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.........   .
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME  157 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence            9999999997754  6899999999999999999999999999999999999999999999999998765442111   1


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc--ccCCCCCCCHhHHHHHHH
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA--EFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~  243 (379)
                      ....++..|+|||.+.+..+ +.++|||||||++|+|++ |..||...+.......+...  ....|...+..+.+++.+
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~-~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  236 (257)
T cd05040         158 EHLKVPFAWCAPESLRTRTF-SHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQ  236 (257)
T ss_pred             cCCCCCceecCHHHhcccCc-CchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHH
Confidence            23456788999999877665 488999999999999998 99999887777666665532  233455678999999999


Q ss_pred             ccCCCCCCCCChHhHhc
Q 016991          244 ILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~  260 (379)
                      ||..+|++|||+.++++
T Consensus       237 ~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         237 CWAHNPADRPTFAALRE  253 (257)
T ss_pred             HCCCCcccCCCHHHHHH
Confidence            99999999999999876

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1.1e-41  Score=325.14  Aligned_cols=251  Identities=23%  Similarity=0.390  Sum_probs=209.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCC-------CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRET-------GESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLA   79 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~-------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~   79 (379)
                      -.+|++++.||+|+||.||.|.+...       +..||+|++....  .....+.+.+|+.+++++ +||||+++++++.
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACT   88 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence            34799999999999999999986532       2378999876432  233457789999999999 7999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD  143 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~  143 (379)
                      ..+..|+++||+++|+|.+++....                .++...+..++.|++.||.|||++|++||||||+||+++
T Consensus        89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~  168 (334)
T cd05100          89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT  168 (334)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence            9999999999999999999987532                367788889999999999999999999999999999999


Q ss_pred             cCCCeEEeeeccccCCCCCccc--ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 016991          144 SYGNLKVSDFGLSALPQQGVEL--LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYK  220 (379)
Q Consensus       144 ~~~~lkl~DfGl~~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~  220 (379)
                      .++.+||+|||++.........  .....++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+......
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  247 (334)
T cd05100         169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  247 (334)
T ss_pred             CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCc-CchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            9999999999998754432111  112234567999999977665 488999999999999998 899999888777777


Q ss_pred             HHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          221 KINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       221 ~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+.... ...|..++.++.+++.+||+.+|.+|||+.+++++
T Consensus       248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         248 LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            665543 34566788999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=8e-42  Score=333.31  Aligned_cols=252  Identities=25%  Similarity=0.363  Sum_probs=207.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~   80 (379)
                      ..++|.+++.||+|+||.||+|.+.     .++..||+|++.....  ....+.+.+|+.+|..+. ||||+++++++..
T Consensus        35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~  112 (401)
T cd05107          35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGACTK  112 (401)
T ss_pred             cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence            3457888999999999999999864     3457899999975432  223457889999999997 9999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcC--------------------------------------------------------
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQG--------------------------------------------------------  104 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~--------------------------------------------------------  104 (379)
                      .+.+|+||||+++|+|.+++...+                                                        
T Consensus       113 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (401)
T cd05107         113 GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM  192 (401)
T ss_pred             CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence            999999999999999999986432                                                        


Q ss_pred             ------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE
Q 016991          105 ------------------------------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL  142 (379)
Q Consensus       105 ------------------------------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll  142 (379)
                                                                .++...+..++.||+.||.|||+.|++||||||+|||+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl  272 (401)
T cd05107         193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI  272 (401)
T ss_pred             hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE
Confidence                                                      25666788899999999999999999999999999999


Q ss_pred             ccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH-
Q 016991          143 DSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTL-  218 (379)
Q Consensus       143 ~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~-  218 (379)
                      +.++.+||+|||++........  ......+++.|+|||.+.+..+ +.++|||||||++|+|++ |..||........ 
T Consensus       273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~  351 (401)
T cd05107         273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLY-TTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF  351 (401)
T ss_pred             eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCC-CcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence            9999999999999875433211  1223457788999999977655 589999999999999998 8999977554443 


Q ss_pred             HHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          219 YKKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       219 ~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...+... ....|..++.++.+|+.+|+..+|.+||++++|++.
T Consensus       352 ~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         352 YNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            3333332 345677789999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2.8e-41  Score=308.43  Aligned_cols=242  Identities=26%  Similarity=0.441  Sum_probs=203.1

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||+|+||.||+|... ++..+|+|.+....  .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            46899999999999865 68899999886543  2233456889999999999999999999999999999999999999


Q ss_pred             ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc-ccccccC
Q 016991           95 ELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL-LHTTCGT  172 (379)
Q Consensus        95 ~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~-~~~~~gt  172 (379)
                      +|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......... .....++
T Consensus        78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05085          78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP  157 (250)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence            999988653 46789999999999999999999999999999999999999999999999998654332111 1122345


Q ss_pred             CCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCC
Q 016991          173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILDPNPK  250 (379)
Q Consensus       173 ~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~  250 (379)
                      ..|+|||++.+..+ +.++||||+|+++|++++ |..||.+.+.......+... ....|..++..+.+++.+||..+|.
T Consensus       158 ~~y~aPE~~~~~~~-~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  236 (250)
T cd05085         158 IKWTAPEALNYGRY-SSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPE  236 (250)
T ss_pred             ccccCHHHhccCCC-CchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcc
Confidence            67999999976554 589999999999999998 99999887766665555444 3355677899999999999999999


Q ss_pred             CCCChHhHhc
Q 016991          251 TRIRIEGIRK  260 (379)
Q Consensus       251 ~R~s~~~il~  260 (379)
                      +||++.++++
T Consensus       237 ~Rp~~~~l~~  246 (250)
T cd05085         237 NRPKFSELQK  246 (250)
T ss_pred             cCCCHHHHHH
Confidence            9999999876

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.8e-41  Score=310.75  Aligned_cols=248  Identities=25%  Similarity=0.379  Sum_probs=209.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ..+|++.+.||.|+||.||+|.+. ++..+|+|.+......    ...+.+|+.+++.++||||+++++++......|++
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence            357999999999999999999885 4778999988654332    24678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-c
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-L  165 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-~  165 (379)
                      |||+++++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++........ .
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~  157 (256)
T cd05112          78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS  157 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence            9999999999998764 5689999999999999999999999999999999999999999999999998865432211 1


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~  243 (379)
                      .....++..|+|||.+.+..+ +.++||||||+++|+|++ |..||...........+... ....|...+..+.+|+.+
T Consensus       158 ~~~~~~~~~~~aPe~~~~~~~-~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  236 (256)
T cd05112         158 STGTKFPVKWSSPEVFSFSKY-SSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQH  236 (256)
T ss_pred             cCCCccchhhcCHhHhccCCc-ChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHH
Confidence            112234568999999976655 489999999999999998 99999887777766666544 233455679999999999


Q ss_pred             ccCCCCCCCCChHhHhcC
Q 016991          244 ILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~h  261 (379)
                      ||+.+|.+|||+.+++++
T Consensus       237 ~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         237 CWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HcccChhhCCCHHHHHHh
Confidence            999999999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-41  Score=309.13  Aligned_cols=242  Identities=26%  Similarity=0.399  Sum_probs=205.3

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      +.||.|+||.||+|.+.. ++.||+|.+......  .....+.+|+.+++.++||||+++++++......|+||||++|+
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            479999999999999987 999999988764432  34567899999999999999999999999999999999999999


Q ss_pred             ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc--ccccc
Q 016991           95 ELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL--HTTCG  171 (379)
Q Consensus        95 ~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~--~~~~g  171 (379)
                      +|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........  ....+
T Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (251)
T cd05041          78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI  157 (251)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence            999998663 468899999999999999999999999999999999999999999999999987554221111  12234


Q ss_pred             CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccCCCC
Q 016991          172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       172 t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP  249 (379)
                      +..|+|||.+.+..+ +.++|+|||||++|+|++ |..||...+.......+... ....|..++.++.+++.+||..+|
T Consensus       158 ~~~y~~PE~~~~~~~-~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  236 (251)
T cd05041         158 PIKWTAPEALNYGRY-TSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDP  236 (251)
T ss_pred             eeccCChHhhccCCC-CcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccCh
Confidence            567999999876554 589999999999999998 89999887766665555443 345566789999999999999999


Q ss_pred             CCCCChHhHhc
Q 016991          250 KTRIRIEGIRK  260 (379)
Q Consensus       250 ~~R~s~~~il~  260 (379)
                      .+|||+.++++
T Consensus       237 ~~Rp~~~ell~  247 (251)
T cd05041         237 ENRPSFSEIYN  247 (251)
T ss_pred             hhCcCHHHHHH
Confidence            99999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.7e-41  Score=316.05  Aligned_cols=248  Identities=28%  Similarity=0.397  Sum_probs=200.0

Q ss_pred             cCe-eeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 016991            9 AKY-EVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--R   81 (379)
Q Consensus         9 ~~y-~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~   81 (379)
                      +|| ++.+.||+|+||+||++.    ...++..||+|++.....  ......+.+|+.+++.++||||+++++++..  .
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG   80 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            566 999999999999998764    445788999999865422  2234668899999999999999999998764  3


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ...|++|||+++++|.+++.. ..+++.+++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  159 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE  159 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence            468999999999999998876 5699999999999999999999999999999999999999999999999999876543


Q ss_pred             Ccc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH--H-------------HHHHHH
Q 016991          162 GVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP--T-------------LYKKIN  223 (379)
Q Consensus       162 ~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~--~-------------~~~~i~  223 (379)
                      ...   ......++..|+|||++.+..+ +.++||||||+++|+|++|..||......  .             ....+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05080         160 GHEYYRVREDGDSPVFWYAVECLKENKF-SYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLE  238 (283)
T ss_pred             cchhhccCCCCCCCceeeCHhHhcccCC-CcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhh
Confidence            221   1122345667999999876655 58999999999999999999998653311  0             001111


Q ss_pred             -hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          224 -AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       224 -~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                       ....+.|..++.++.+++.+||++||++|||++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         239 RGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence             1122345667899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=3.7e-41  Score=309.91  Aligned_cols=248  Identities=22%  Similarity=0.400  Sum_probs=206.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||+|.+. .+..+|+|.+....    ...+.+.+|+.+++.++|+||+++++.+.. ...|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~   76 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY   76 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence            34679999999999999999999865 45679999876532    234678899999999999999999999887 7789


Q ss_pred             EEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           86 IILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      ++|||+++++|.+++...  ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++.......
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  156 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE  156 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence            999999999999999763  357888899999999999999999999999999999999999999999999886543321


Q ss_pred             c-cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHH
Q 016991          164 E-LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSL  240 (379)
Q Consensus       164 ~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~l  240 (379)
                      . ......++..|+|||++....+ +.++|+|||||++|++++ |..||.+.+.......+... ....+...+.++.++
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~-~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (260)
T cd05073         157 YTAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNI  235 (260)
T ss_pred             cccccCCcccccccCHhHhccCCc-CccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHH
Confidence            1 1122335667999999976554 589999999999999998 99999887776666655443 234456688999999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      +.+||++||++||++.++++
T Consensus       236 i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         236 MMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHcccCcccCcCHHHHHH
Confidence            99999999999999998764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4.2e-41  Score=311.13  Aligned_cols=251  Identities=27%  Similarity=0.381  Sum_probs=208.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .-.+|.+.+.||+|+||.||+|.+...   ...||||......  .....+.+.+|+.+++.++||||+++++++.. +.
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~   80 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP   80 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence            346799999999999999999987644   3578999875433  13345678999999999999999999998876 45


Q ss_pred             EEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .|++|||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            789999999999999997644 5899999999999999999999999999999999999999999999999998654332


Q ss_pred             ccc-ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHH
Q 016991          163 VEL-LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATS  239 (379)
Q Consensus       163 ~~~-~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~  239 (379)
                      ... .....+++.|+|||.+....+ +.++|||||||++|+|++ |..||...+.......+... ....|..++.++.+
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFRRF-TSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYS  239 (270)
T ss_pred             cceecCCCCccccccChhhhccCCC-CchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHH
Confidence            111 112234568999999876655 589999999999999986 99999887766665555443 34567778999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcC
Q 016991          240 LIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +|.+|+..+|.+|||+.+++..
T Consensus       240 li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         240 LMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999998763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.7e-41  Score=311.63  Aligned_cols=239  Identities=22%  Similarity=0.247  Sum_probs=194.6

Q ss_pred             eeecccCCeEEEEEEECCC------------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991           15 RTIGEGTFAKVRFAQNRET------------GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~------------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      +.||+|+||.||+|.....            ...||+|++....   ......+.+|+.+++.++||||+++++++....
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            4689999999999985322            2368889876532   234457888999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC-------eEEeeec
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN-------LKVSDFG  154 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~-------lkl~DfG  154 (379)
                      ..+++|||+++++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.       ++++|||
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            999999999999998888653 56899999999999999999999999999999999999987664       8999999


Q ss_pred             cccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhcccCCCCCC
Q 016991          155 LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM-AGYLPFGETDLPTLYKKINAAEFSCPFWF  233 (379)
Q Consensus       155 l~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll-~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~  233 (379)
                      ++......    ....|+..|+|||++.+....+.++||||+||++|+|+ .|..||.......... ............
T Consensus       158 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~  232 (262)
T cd05077         158 IPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCMLVTPS  232 (262)
T ss_pred             CCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCccCCCCC
Confidence            87644321    23457889999999875555568999999999999998 5899997765444332 223333333345


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++++.+||.+||+.||.+||++.+|+++
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            6889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=5.1e-41  Score=312.17  Aligned_cols=251  Identities=21%  Similarity=0.284  Sum_probs=209.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-C
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-R   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~   81 (379)
                      .-++|++.+.||+|+||.||.|.+..    ++..|++|.+....  .....+.+.+|+.+++.++||||+++++++.. +
T Consensus         4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   81 (280)
T cd05043           4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG   81 (280)
T ss_pred             chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            45689999999999999999999876    35889999876432  33345778899999999999999999998765 5


Q ss_pred             CeEEEEEeccCCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeee
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ--------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDF  153 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~--------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~Df  153 (379)
                      ...++++||+++++|.+++...        ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+||
T Consensus        82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCC
Confidence            7889999999999999998653        35889999999999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCC
Q 016991          154 GLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSC  229 (379)
Q Consensus       154 Gl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~  229 (379)
                      |+++.......  ......++..|+|||++.+..+ +.++|||||||++|++++ |++||...+.......+... ....
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  240 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEY-SSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQ  240 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCC-CchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCC
Confidence            99875433211  1122345678999999977665 589999999999999998 99999887766666555443 2344


Q ss_pred             CCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +..+++++.+++.+|+..||++|||+.++++
T Consensus       241 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         241 PINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            5567899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.1e-41  Score=313.76  Aligned_cols=248  Identities=25%  Similarity=0.385  Sum_probs=200.9

Q ss_pred             eeeeeeecccCCeEEEEEEE----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 016991           11 YEVGRTIGEGTFAKVRFAQN----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR--TKV   84 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~--~~~   84 (379)
                      |++.+.||+|+||.||+|..    ..++..||+|.+....  .......+.+|+.+++.++||||+++++++...  ...
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            68899999999999999974    4678999999986542  233456799999999999999999999998765  678


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      ++||||++|++|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence            9999999999999998664 368999999999999999999999999999999999999999999999999987654322


Q ss_pred             c---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---------------HHHHHHHHh-
Q 016991          164 E---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA-  224 (379)
Q Consensus       164 ~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---------------~~~~~~i~~-  224 (379)
                      .   ......|+..|+|||++.+..+ +.++||||+||++|+|+++..|+.....               ......+.. 
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~-~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKF-YIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG  242 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCC-CccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence            1   1223456778999999877655 4899999999999999998766532110               111111111 


Q ss_pred             cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          225 AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       225 ~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...+.+..+++.+.+|+.+||+.||.+|||+.+++++
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            1233455689999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=4.8e-41  Score=307.97  Aligned_cols=242  Identities=27%  Similarity=0.462  Sum_probs=204.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||.+..  +++.||+|.+....     ..+.+.+|+.+++.++||||+++++++... ..|+
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~   75 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI   75 (254)
T ss_pred             cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence            457899999999999999999864  68899999885432     235688999999999999999999998765 4799


Q ss_pred             EEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+++++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++......  
T Consensus        76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--  153 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--  153 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence            999999999999997643  5789999999999999999999999999999999999999999999999988654322  


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIH  242 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~  242 (379)
                       ......+..|+|||.+.+..+ +.++|+|||||++|+|++ |.+||...+.......+.... ...+..+++.+.+++.
T Consensus       154 -~~~~~~~~~y~~pe~~~~~~~-~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  231 (254)
T cd05083         154 -VDNSKLPVKWTAPEALKHKKF-SSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMT  231 (254)
T ss_pred             -CCCCCCCceecCHHHhccCCc-CchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHH
Confidence             112234567999999876655 589999999999999997 999998888776666655442 3345567899999999


Q ss_pred             HccCCCCCCCCChHhHhc
Q 016991          243 KILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~  260 (379)
                      +||+.+|..||+++++++
T Consensus       232 ~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         232 SCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999876

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=3.1e-41  Score=313.29  Aligned_cols=238  Identities=24%  Similarity=0.278  Sum_probs=194.3

Q ss_pred             eecccCCeEEEEEEECCC------------------------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc
Q 016991           16 TIGEGTFAKVRFAQNRET------------------------GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI   71 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~------------------------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I   71 (379)
                      .||+|+||.||+|....+                        ...||+|++....   ......+.+|+.+++.++||||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence            589999999999975322                        2358888885432   2334568889999999999999


Q ss_pred             ceEEEEEEeCCeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC----
Q 016991           72 VRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG----  146 (379)
Q Consensus        72 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~----  146 (379)
                      +++++++...+..|+||||+++|+|..++.. .+.+++..+..++.||+.||+|||++||+||||||+||+++..+    
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999988865 46789999999999999999999999999999999999998654    


Q ss_pred             ---CeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHHH
Q 016991          147 ---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM-AGYLPFGETDLPTLYKKI  222 (379)
Q Consensus       147 ---~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll-~g~~Pf~~~~~~~~~~~i  222 (379)
                         .+|++|||++......    ....++..|+|||.+.+....+.++||||+||++|+|+ +|..||...+....... 
T Consensus       159 ~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-  233 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-  233 (274)
T ss_pred             ccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-
Confidence               3899999987543221    23457888999999876554568999999999999995 69999987665443332 


Q ss_pred             HhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          223 NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       223 ~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .......|...++++.++|.+||+.+|.+|||+.+++++
T Consensus       234 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         234 YEKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            233344555567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.9e-41  Score=315.00  Aligned_cols=251  Identities=22%  Similarity=0.328  Sum_probs=207.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGE----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ..++|++.+.||+|+||.||+|.+..+|.    .||+|.+.....  ......+.+|+.+++.++||||+++++++... 
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-   81 (303)
T cd05110           5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMDHPHLVRLLGVCLSP-   81 (303)
T ss_pred             chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence            45689999999999999999999987776    468888764332  22335688999999999999999999998754 


Q ss_pred             eEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..++++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence            4679999999999999987644 689999999999999999999999999999999999999999999999999876543


Q ss_pred             Ccc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhH
Q 016991          162 GVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~  237 (379)
                      ...  ......++..|+|||++.+..+ +.++|||||||++|+|++ |..||.+.........+.... +..+...+..+
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~-~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (303)
T cd05110         162 DEKEYNADGGKMPIKWMALECIHYRKF-THQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDV  240 (303)
T ss_pred             cccccccCCCccccccCCHHHhccCCC-ChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHH
Confidence            221  1223345678999999876665 589999999999999997 999998776555544444332 34455678999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+++.+|+..+|++||+++++++.
T Consensus       241 ~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         241 YMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999998874

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=9e-41  Score=311.17  Aligned_cols=248  Identities=27%  Similarity=0.405  Sum_probs=199.7

Q ss_pred             cCeeeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CC
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RT   82 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~   82 (379)
                      .+|++.+.||+|+||.||.+.    +..++..||+|.+....   ....+.+.+|+.+++.++||||+++++++..  ..
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   80 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR   80 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence            479999999999999999997    45678999999986532   3345678999999999999999999998643  45


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      .+++|+||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence            789999999999999998764 4689999999999999999999999999999999999999999999999999876543


Q ss_pred             Ccccc---cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH----------------HHHHH
Q 016991          162 GVELL---HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT----------------LYKKI  222 (379)
Q Consensus       162 ~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~----------------~~~~i  222 (379)
                      .....   ....++..|+|||++.+..+ +.++||||+||++|+|++|..|+.......                +...+
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELL  239 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCc-ChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHH
Confidence            22211   11223446999999976655 589999999999999999887764432211                11111


Q ss_pred             Hh-cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          223 NA-AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       223 ~~-~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .. ..+..+..++.++.+||.+||..+|++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         240 KNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             hcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            11 123445568899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-42  Score=330.33  Aligned_cols=249  Identities=26%  Similarity=0.399  Sum_probs=214.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCc---E-EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGE---S-VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~---~-vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      +-.+.+.||+|+||.||+|..+..+.   . ||||...............+.+|.++|+.++|||||++||+......+|
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~  237 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM  237 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence            44556899999999999999775422   3 8999887644455667788999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||+|+||+|.+++.+.+ .++..+...++.+.+.||+|||+++++||||-.+|+|++.++.+||+|||+++..... .
T Consensus       238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~-~  316 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY-V  316 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcce-e
Confidence            9999999999999999877 4999999999999999999999999999999999999999999999999998765421 1


Q ss_pred             cccccc-cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccc--CCCCCCCHhHHHH
Q 016991          165 LLHTTC-GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEF--SCPFWFSTGATSL  240 (379)
Q Consensus       165 ~~~~~~-gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~l  240 (379)
                      .....+ -...|+|||.+....| +.++||||+||++||+++ |..||.+....+...+|....+  +.|...++++..+
T Consensus       317 ~~~~~~klPirWLAPEtl~~~~~-s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~  395 (474)
T KOG0194|consen  317 MKKFLKKLPIRWLAPETLNTGIF-SFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKV  395 (474)
T ss_pred             eccccccCcceecChhhhccCcc-ccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHH
Confidence            111112 3457999999987755 599999999999999998 8999999999999999955544  4566778899999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      +.+|+..||+.|||+.++.+
T Consensus       396 ~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  396 MKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHhccCChhhccCHHHHHH
Confidence            99999999999999999876

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.1e-40  Score=306.61  Aligned_cols=244  Identities=25%  Similarity=0.326  Sum_probs=197.7

Q ss_pred             eeecccCCeEEEEEEECC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeEEEEEec
Q 016991           15 RTIGEGTFAKVRFAQNRE---TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA-SRTKVYIILEF   90 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~-~~~~~~lv~E~   90 (379)
                      +.||+|+||.||+|.+..   ++..||||.+....  .....+.+.+|+.+++.++||||+++++++. .++..+++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence            468999999999998754   34579999875422  2334567889999999999999999999765 45678999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc----cc
Q 016991           91 VTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV----EL  165 (379)
Q Consensus        91 ~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~----~~  165 (379)
                      +.+++|.+++... ..+++..+..++.||+.||.|||+.|++||||||+|||++.++.+||+|||++.......    ..
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  158 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHN  158 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecc
Confidence            9999999998764 356777888999999999999999999999999999999999999999999987543211    11


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHK  243 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~  243 (379)
                      .....+++.|+|||.+.+..+ +.++|||||||++|+|++ |.+||...+.......+.... ...|..+++.+.+++.+
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  237 (262)
T cd05058         159 HTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLS  237 (262)
T ss_pred             cccCcCCccccChhHhccCcc-chHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence            123345678999999877665 489999999999999999 577887766655555554433 34456678999999999


Q ss_pred             ccCCCCCCCCChHhHhcC
Q 016991          244 ILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~h  261 (379)
                      ||.++|++||++.++++.
T Consensus       238 cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         238 CWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HcCCChhhCCCHHHHHHH
Confidence            999999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-43  Score=319.37  Aligned_cols=253  Identities=30%  Similarity=0.469  Sum_probs=207.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--C----CcceEEEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH--P----NIVRLHEVLA   79 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h--p----~Iv~l~~~~~   79 (379)
                      ..-+||.++++||+|+||+|-.+.+..++..||||+++.-.  +  ..+..+-|+++|.++.+  |    -+|.+.++|.
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--k--YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFd  161 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--K--YREAALIEIEVLQKINESDPNGKFRCVQMRDWFD  161 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--H--HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhh
Confidence            45679999999999999999999999999999999986532  2  33566779999999942  3    3678888899


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-------------
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-------------  144 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-------------  144 (379)
                      -.+++++|+|.+ |.++++++..++  +++.+.++.+.+||+.++.|||+.+++|-||||||||+.+             
T Consensus       162 yrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~  240 (415)
T KOG0671|consen  162 YRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV  240 (415)
T ss_pred             ccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence            999999999998 889999998765  6889999999999999999999999999999999999832             


Q ss_pred             -------CCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 016991          145 -------YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT  217 (379)
Q Consensus       145 -------~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~  217 (379)
                             +..++|+|||.++...+.   -++.+.|..|+|||++.+-++. .++||||+||||+|+.+|...|+..+..+
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS-~pCDvWSiGCIL~ElytG~~LFqtHen~E  316 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWS-QPCDVWSIGCILVELYTGETLFQTHENLE  316 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcC-CccCceeeeeEEEEeeccceecccCCcHH
Confidence                   235899999998866543   2566789999999999999996 99999999999999999999997655322


Q ss_pred             ---HHHHHHhc------------------ccCCCCC----------------------C---CHhHHHHHHHccCCCCCC
Q 016991          218 ---LYKKINAA------------------EFSCPFW----------------------F---STGATSLIHKILDPNPKT  251 (379)
Q Consensus       218 ---~~~~i~~~------------------~~~~p~~----------------------~---s~~~~~li~~~L~~dP~~  251 (379)
                         +.+.|...                  .+..|..                      .   -.++.|||++||..||.+
T Consensus       317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~  396 (415)
T KOG0671|consen  317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR  396 (415)
T ss_pred             HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence               33333221                  1111111                      0   124779999999999999


Q ss_pred             CCChHhHhcCcccccc
Q 016991          252 RIRIEGIRKHPWFRKN  267 (379)
Q Consensus       252 R~s~~~il~hp~f~~~  267 (379)
                      |+|+.|+|.||||...
T Consensus       397 RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  397 RITLREALSHPFFARL  412 (415)
T ss_pred             cccHHHHhcCHHhhcC
Confidence            9999999999999753

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.4e-40  Score=307.48  Aligned_cols=243  Identities=19%  Similarity=0.278  Sum_probs=192.1

Q ss_pred             eeecccCCeEEEEEEECC--CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEGTFAKVRFAQNRE--TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~--~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      +.||+|+||+||+|....  ....+|+|.+....  .......+.+|+.+++.++||||+++++.+......|+||||++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP   78 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence            469999999999996532  34578888775432  23334668889999999999999999999999999999999999


Q ss_pred             CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--c
Q 016991           93 GGELFDKIVHQG-----RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--L  165 (379)
Q Consensus        93 gg~L~~~l~~~~-----~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~  165 (379)
                      +|+|.+++....     ..++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........  .
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            999999997643     246778899999999999999999999999999999999999999999999865332211  1


Q ss_pred             ccccccCCCCCchhhhccC------CCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH-HHhcccC-----CCCC
Q 016991          166 LHTTCGTPNYVAPEVLSNR------GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKK-INAAEFS-----CPFW  232 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~------~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~-i~~~~~~-----~p~~  232 (379)
                      .....+++.|+|||++...      ...+.++||||+||++|+|++ |..||........... +......     .+..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLK  238 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccccc
Confidence            1233456789999998532      233579999999999999998 8899987665444333 3333222     2335


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +++...+++..|+ .||.+|||++++++
T Consensus       239 ~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         239 YSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             CCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            7888899999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.3e-40  Score=307.75  Aligned_cols=243  Identities=20%  Similarity=0.249  Sum_probs=193.0

Q ss_pred             eeecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      +.||+|+||.||+|...  .++..+|+|.+.....  ......+.+|+.+++.++||||+++++.+.+....++||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence            46899999999999864  3567899998865432  2233568889999999999999999999999999999999999


Q ss_pred             CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc--c
Q 016991           93 GGELFDKIVHQG-----RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--L  165 (379)
Q Consensus        93 gg~L~~~l~~~~-----~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~--~  165 (379)
                      +|+|.+++....     ..++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++........  .
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            999999986532     356677889999999999999999999999999999999999999999999865433211  1


Q ss_pred             ccccccCCCCCchhhhccCC------CCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHH-HHhcccCC-----CCC
Q 016991          166 LHTTCGTPNYVAPEVLSNRG------YDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKK-INAAEFSC-----PFW  232 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~------~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~-i~~~~~~~-----p~~  232 (379)
                      .....|++.|+|||++.+..      ..+.++||||+||++|+|++ |..||...+....... +.......     +..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd05087         159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLP  238 (269)
T ss_pred             CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCC
Confidence            12345778899999986432      13579999999999999996 9999987665544332 22222221     224


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .++.+.+++.+|+ .+|.+|||+++|+.
T Consensus       239 ~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         239 LSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             CChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            6788999999998 68999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=6.6e-41  Score=309.32  Aligned_cols=243  Identities=23%  Similarity=0.359  Sum_probs=201.9

Q ss_pred             eeecccCCeEEEEEEECCCC------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991           15 RTIGEGTFAKVRFAQNRETG------ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~------~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +.||+|+||.||+|.+...+      ..+|||.+.+...  ......+.+|+.+++.++||||+++++++...+..|++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence            46899999999999986544      6899998865321  223467889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-----CeEEeeeccc
Q 016991           89 EFVTGGELFDKIVHQ-------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-----NLKVSDFGLS  156 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-----~lkl~DfGl~  156 (379)
                      ||+++++|.+++...       ..+++..+..++.||+.||.|||+.+++|+||||+||+++.++     .++|+|||++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            999999999999642       3478889999999999999999999999999999999999887     8999999998


Q ss_pred             cCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCC
Q 016991          157 ALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFW  232 (379)
Q Consensus       157 ~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~  232 (379)
                      .......  .......++..|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+... .+..+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd05044         159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF-TTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPEN  237 (269)
T ss_pred             cccccccccccCcccCCCccccCHHHHccCCc-ccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCccc
Confidence            6543221  11123345678999999977655 589999999999999998 99999877766665555433 3455667


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +++.+.++|.+||.++|.+||+++++++
T Consensus       238 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         238 CPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             chHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            8999999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.7e-40  Score=306.79  Aligned_cols=250  Identities=29%  Similarity=0.506  Sum_probs=209.7

Q ss_pred             CeeeeeeecccCCeEEEEEEECC-CCcEEEEEEeeccc-------ccchHHHHHHHHHHHHHHh-CCCCCcceEEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKST-------ILKHRMVDQIKREISIMKI-VRHPNIVRLHEVLAS   80 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~-~~~~vaiK~i~~~~-------~~~~~~~~~~~~Ei~~l~~-l~hp~Iv~l~~~~~~   80 (379)
                      .|++.+.||+|+||.||+|.+.. ++..+|+|.+....       .........+.+|+.++.. ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48899999999999999999987 68899999886422       1222344567788888764 799999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           81 RTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                      .+..+++|||++|++|.+.+..    ...+++..++.++.|++.||.|||+ .|++||||+|+||+++.++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            9999999999999999888743    3568999999999999999999996 7899999999999999999999999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-CCC-CC
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPF-WF  233 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p~-~~  233 (379)
                      +....... ......|+..|+|||.+.+..+ +.++|+||||+++|+|++|..||...+.......+...... .+. .+
T Consensus       161 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~-~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (269)
T cd08528         161 AKQKQPES-KLTSVVGTILYSCPEIVKNEPY-GEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMY  238 (269)
T ss_pred             eeeccccc-ccccccCcccCcChhhhcCCCC-chHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccC
Confidence            87654432 3445678999999999977554 58999999999999999999999887776666665554433 222 57


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++++.++|.+||+.||++||++.++..+
T Consensus       239 ~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         239 SEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            8999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=8.5e-41  Score=306.47  Aligned_cols=236  Identities=22%  Similarity=0.259  Sum_probs=194.2

Q ss_pred             eeecccCCeEEEEEEECCCC----------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991           15 RTIGEGTFAKVRFAQNRETG----------ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~----------~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +.||+|+||.||+|.+..++          ..+++|++.....    ....+.+|+.+++.++||||+++++++.. ...
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence            46899999999999998777          3577787654321    14678899999999999999999999888 778


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-------CeEEeeeccc
Q 016991           85 YIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-------NLKVSDFGLS  156 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-------~lkl~DfGl~  156 (379)
                      ++||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++.++       .+||+|||++
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999999998766 789999999999999999999999999999999999999888       7999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcccCCCCCCC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEFSCPFWFS  234 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s  234 (379)
                      .....    .....++..|+|||++... ...+.++||||+||++|+|++ |..||...+......... .....|...+
T Consensus       156 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~  230 (259)
T cd05037         156 ITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMPDC  230 (259)
T ss_pred             ccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCCCc
Confidence            75433    2234567889999998765 344689999999999999999 688887765433333322 2222233334


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..+.++|.+||..+|.+|||+.++++
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         231 AELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHHH
Confidence            88999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-42  Score=329.81  Aligned_cols=250  Identities=22%  Similarity=0.336  Sum_probs=212.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      +..+...++.+||+|.||+||+|.+-   -.||||+++......+ ..+.+++|+.++++-+|.||+-+.|++..... .
T Consensus       389 Ip~~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-A  463 (678)
T KOG0193|consen  389 IPPEEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMNPPL-A  463 (678)
T ss_pred             cCHHHhhccceeccccccceeecccc---cceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcCCce-e
Confidence            44567788999999999999999986   3799999987665544 67899999999999999999999999998887 9


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC--C
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--G  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~--~  162 (379)
                      ||+-+|+|.+|..++.- ..++.....+.|++||+.|+.|||.++|||||||..||++++++.+||+|||++.....  +
T Consensus       464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g  543 (678)
T KOG0193|consen  464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG  543 (678)
T ss_pred             eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence            99999999999998854 35788889999999999999999999999999999999999999999999999875432  3


Q ss_pred             cccccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-----CCCCCCH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-----CPFWFST  235 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-----~p~~~s~  235 (379)
                      ...+....|...|+|||++...  -.++..+||||+|+++|||++|.+||...+..++...+..+...     .-..++.
T Consensus       544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk  623 (678)
T KOG0193|consen  544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPK  623 (678)
T ss_pred             ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHH
Confidence            3455667789999999999633  22358999999999999999999999977766666555555322     2234577


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++++|+..|+..+++.||.+.+||.
T Consensus       624 ~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  624 AMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHHHHHhcCcccCccHHHHHH
Confidence            9999999999999999999999887

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.9e-40  Score=306.96  Aligned_cols=249  Identities=26%  Similarity=0.402  Sum_probs=204.7

Q ss_pred             eeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 016991           11 YEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-----   82 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-----   82 (379)
                      |++.+.||+|+||.||+|...   .++..||||++.... ......+.+.+|+.+++.++||||+++++++....     
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence            678899999999999999864   357899999986543 23334577889999999999999999999875432     


Q ss_pred             -eEEEEEeccCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           83 -KVYIILEFVTGGELFDKIVHQ------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        83 -~~~lv~E~~~gg~L~~~l~~~------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                       ..+++++|+.+|+|.+++...      ..++...+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074          80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence             347889999999998877532      2578899999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCC
Q 016991          156 SALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPF  231 (379)
Q Consensus       156 ~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~  231 (379)
                      +........  ......+++.|++||.+....+ +.++|||||||++|+|++ |.+||.+.+....+..+... ....+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~-~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  238 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVY-TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPP  238 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCcc-chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCC
Confidence            875543211  1123345678999999977665 489999999999999999 99999887776666655443 345566


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..++.+.+++.+||+.+|+.|||+.+++++
T Consensus       239 ~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         239 DCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            788999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.6e-43  Score=306.15  Aligned_cols=264  Identities=26%  Similarity=0.420  Sum_probs=215.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----   80 (379)
                      ...++.|+-..+||+|.||.||+|+.+.+|+.||+|++-.+. .+........+|+++|..++|+|++.+++++.+    
T Consensus        13 ~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp   91 (376)
T KOG0669|consen   13 CDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATP   91 (376)
T ss_pred             eecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence            345778999999999999999999999999999998764322 122344567789999999999999999988743    


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           81 ----RTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        81 ----~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                          ...+|+|+.+|+ -+|.-.+.+. .+++..++..++.+++.||.|+|+..|+|||+||+|+||+.+|.+||+|||+
T Consensus        92 ~~r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   92 TNRDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             cccccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence                346999999995 4788777665 6899999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCc----ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--cc--
Q 016991          156 SALPQQGV----ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EF--  227 (379)
Q Consensus       156 ~~~~~~~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~--  227 (379)
                      ++.+....    ......+-|.+|++||.+.+...++++.|||..|||+.+|+++.+.|.+.+.......|...  ..  
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            96544321    12334566999999999999888899999999999999999999999887655444333210  00  


Q ss_pred             ------------------CC-------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          228 ------------------SC-------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       228 ------------------~~-------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                                        +.             |..-++++.||+.+||..||.+|+++++++.|.||.+...|
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence                              01             12235689999999999999999999999999999876443

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=5.2e-40  Score=308.26  Aligned_cols=250  Identities=14%  Similarity=0.131  Sum_probs=190.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccc--hHH------HHHHHHHHHHHHhCCCCCcceEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILK--HRM------VDQIKREISIMKIVRHPNIVRLHE   76 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~--~~~------~~~~~~Ei~~l~~l~hp~Iv~l~~   76 (379)
                      -++|++.+.||+|+||+||+|.+..+   +..+|+|+........  +..      ......++..+..++|+||+++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   90 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG   90 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence            36899999999999999999999877   6778888654322110  000      011223344556778999999998


Q ss_pred             EEEeCC----eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           77 VLASRT----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        77 ~~~~~~----~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      ......    ..++++|++ ..++.+.+......++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|
T Consensus        91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~D  169 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIID  169 (294)
T ss_pred             eeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEE
Confidence            765433    457888887 446666666655678899999999999999999999999999999999999999999999


Q ss_pred             eccccCCCCCc-------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HH-------
Q 016991          153 FGLSALPQQGV-------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL-PT-------  217 (379)
Q Consensus       153 fGl~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~-------  217 (379)
                      ||++.......       .......||+.|+|||++.+..+ +.++||||+||++|+|++|.+||.+.+. ..       
T Consensus       170 FGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~-~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~  248 (294)
T PHA02882        170 YGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACV-TRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC  248 (294)
T ss_pred             cCCceeeccCCcccccccccccccCCCccccCHHHhCCCCC-CcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH
Confidence            99987543211       11223469999999999987766 5999999999999999999999977632 11       


Q ss_pred             -HHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          218 -LYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       218 -~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                       ....+......+ ...++.+.++++.|+..+|.+||++++|++
T Consensus       249 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        249 DFIKRLHEGKIKI-KNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHhhhhhhcc-CCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence             223333333333 345889999999999999999999999875

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.4e-40  Score=307.55  Aligned_cols=249  Identities=25%  Similarity=0.376  Sum_probs=204.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEEC----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CC
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNR----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RT   82 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~   82 (379)
                      ..|++.+.||+|+||.||+|...    .++..||||++......  ...+.+.+|+.+++.++||||+++++++..  ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence            57889999999999999999864    34889999998765432  345789999999999999999999999877  56


Q ss_pred             eEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..+++|||+++++|.+++.... .+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            8999999999999999997654 689999999999999999999999999999999999999999999999999876553


Q ss_pred             Ccccc---cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH---------------HHHHHH
Q 016991          162 GVELL---HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT---------------LYKKIN  223 (379)
Q Consensus       162 ~~~~~---~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~---------------~~~~i~  223 (379)
                      .....   ....++..|+|||.+.+..+ +.++||||+|+++++|++|..||.......               ....+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~-~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKF-SSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK  240 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCC-CcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence            22111   12234567999999977655 489999999999999999999986543211               112222


Q ss_pred             h-cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          224 A-AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       224 ~-~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      . .....|..++.++.+++.+||++||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            1 123445567889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=3.1e-41  Score=336.29  Aligned_cols=253  Identities=26%  Similarity=0.383  Sum_probs=217.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      +....+-...+.||+|+||+||+|+..     .....||||.++...  ..+...+|++|+++|..++|||||+++|++.
T Consensus       482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~  559 (774)
T KOG1026|consen  482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCR  559 (774)
T ss_pred             EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence            344556777899999999999999864     234689999987654  3446688999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQG--------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~--------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      .++.+|+|+|||..|+|.++|...+              +++..+...++.||+.|+.||-++.++||||-..|.||.++
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN  639 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence            9999999999999999999997532              27788999999999999999999999999999999999999


Q ss_pred             CCeEEeeeccccCCCCCccc--ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q 016991          146 GNLKVSDFGLSALPQQGVEL--LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI  222 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i  222 (379)
                      -.+||+|||+++-.-..+..  .....=...|||||.+....|. .+|||||+||+|||+++ |..||.+.+..++.+.|
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFT-teSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i  718 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFT-TESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI  718 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCccc-chhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence            99999999999754332110  1111124579999999887775 99999999999999997 99999999999999888


Q ss_pred             Hhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          223 NAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       223 ~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..+. +++|..+++++.+|+..|++.+|++||++.||-.
T Consensus       719 ~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~  757 (774)
T KOG1026|consen  719 RAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHS  757 (774)
T ss_pred             HcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            7766 6789999999999999999999999999999753

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-40  Score=315.98  Aligned_cols=247  Identities=28%  Similarity=0.366  Sum_probs=196.1

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-eEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-KVYII   87 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-~~~lv   87 (379)
                      +.|.-...||+|+||.||+|...+ |..||||.+.......   ..++.+|+.++.+++|||+|+++|+|.+.+ ..++|
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV  150 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV  150 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence            456667899999999999999864 4899999776543221   345999999999999999999999999988 59999


Q ss_pred             EeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           88 LEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKG---VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~g---i~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      +||+++|+|.+++....  .+++.+..+|+.+++.||+|||+..   |+||||||+|||||++.+.||+|||+|......
T Consensus       151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~  230 (361)
T KOG1187|consen  151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG  230 (361)
T ss_pred             EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc
Confidence            99999999999997765  8899999999999999999999853   999999999999999999999999999655431


Q ss_pred             ccccccc-ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---h---HHH-HHHHHhcc------cC
Q 016991          163 VELLHTT-CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD---L---PTL-YKKINAAE------FS  228 (379)
Q Consensus       163 ~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---~---~~~-~~~i~~~~------~~  228 (379)
                      .....+. .||.+|+|||++.. +..+.++||||+||+|.||++|+.|.+...   .   ... ...+....      ..
T Consensus       231 ~~~~~~~~~gt~gY~~PEy~~~-g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~  309 (361)
T KOG1187|consen  231 DTSVSTTVMGTFGYLAPEYAST-GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPR  309 (361)
T ss_pred             ccceeeecCCCCccCChhhhcc-CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCC
Confidence            1222233 89999999999976 444689999999999999999998887532   1   111 11122211      11


Q ss_pred             CC-CCCC--Hh---HHHHHHHccCCCCCCCCChHhHhc
Q 016991          229 CP-FWFS--TG---ATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       229 ~p-~~~s--~~---~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +. ...+  .+   +..+..+|++.+|..||++.++.+
T Consensus       310 l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  310 LKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             ccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            11 1122  22   456889999999999999999644

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.5e-39  Score=300.86  Aligned_cols=243  Identities=19%  Similarity=0.295  Sum_probs=191.9

Q ss_pred             eeecccCCeEEEEEEECCC--CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEGTFAKVRFAQNRET--GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      +.||+|+||+||++....+  ...+++|.+....  .....+.+.+|+.+++.++||||+++++.+......|+||||++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE   78 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCC
Confidence            3699999999999975433  2345666655432  22345678999999999999999999999999999999999999


Q ss_pred             CCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc--ccc
Q 016991           93 GGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--ELL  166 (379)
Q Consensus        93 gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~--~~~  166 (379)
                      +|+|.+++...    ...++..+..++.||+.||+|||+.+++||||||+|||++.++.++|+|||++.......  ...
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            99999999754    245677788999999999999999999999999999999999999999999875432211  122


Q ss_pred             cccccCCCCCchhhhccCC------CCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-c-----cCCCCCC
Q 016991          167 HTTCGTPNYVAPEVLSNRG------YDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-E-----FSCPFWF  233 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~------~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~-----~~~p~~~  233 (379)
                      ...+|+..|+|||++....      ..+.++|||||||++|+|++ |..||...+....+..+... .     ...+..+
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPY  238 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCC
Confidence            3457889999999985321      12478999999999999996 68899776665555543322 1     2233457


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++.+.+++..|+ .+|.+||+++++++
T Consensus       239 ~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         239 SERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             cHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            889999999999 67999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-41  Score=327.62  Aligned_cols=242  Identities=31%  Similarity=0.525  Sum_probs=198.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC------
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT------   82 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~------   82 (379)
                      +-|..-+.||+||||.||+++++.+|+.||||.+++.....  -.+...+|+++|++++|||||+++++=.+..      
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r--~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~   90 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR--PRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR   90 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccc--hHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence            56888899999999999999999999999999998755333  3477889999999999999999998765433      


Q ss_pred             eEEEEEeccCCCChHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc--CC--CeEEeeecc
Q 016991           83 KVYIILEFVTGGELFDKIVH---QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS--YG--NLKVSDFGL  155 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~---~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~--~~--~lkl~DfGl  155 (379)
                      .-.+|||||+||+|+..+.+   ...++|.+...++.++..|+.|||++||+||||||+||++-.  +|  ..||+|||.
T Consensus        91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~  170 (732)
T KOG4250|consen   91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA  170 (732)
T ss_pred             cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence            46799999999999999964   358999999999999999999999999999999999999843  23  479999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHh------
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-----TLYKKINA------  224 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-----~~~~~i~~------  224 (379)
                      |+....+ ....+.+||+.|.+||++....+++.-+|.||+||++|++.||..||-....+     .++..+..      
T Consensus       171 Arel~d~-s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~  249 (732)
T KOG4250|consen  171 ARELDDN-SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA  249 (732)
T ss_pred             cccCCCC-CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence            9877665 36778899999999999986667789999999999999999999999443222     22222211      


Q ss_pred             --------------cccCCCCCCCHh----HHHHHHHccCCCCCCCC
Q 016991          225 --------------AEFSCPFWFSTG----ATSLIHKILDPNPKTRI  253 (379)
Q Consensus       225 --------------~~~~~p~~~s~~----~~~li~~~L~~dP~~R~  253 (379)
                                    ..+++|..+++.    +...+..||..||.+|.
T Consensus       250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                          112334445544    34678889999999998

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=7.1e-40  Score=331.35  Aligned_cols=256  Identities=18%  Similarity=0.264  Sum_probs=180.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCC----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEE---
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRET----GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEV---   77 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~---   77 (379)
                      ....++|++.+.||+|+||.||+|.+..+    +..||+|.+......     +....+  .++...+.++..+...   
T Consensus       128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~  200 (566)
T PLN03225        128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLE  200 (566)
T ss_pred             CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhc
Confidence            34578999999999999999999999988    999999987542211     111111  1112222222222111   


Q ss_pred             ---EEeCCeEEEEEeccCCCChHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCceeec
Q 016991           78 ---LASRTKVYIILEFVTGGELFDKIVHQGR--------------------LLENDCRRYFQQLIDAVAHCHSKGVYHRD  134 (379)
Q Consensus        78 ---~~~~~~~~lv~E~~~gg~L~~~l~~~~~--------------------l~e~~~~~~~~qil~~l~ylH~~gi~HrD  134 (379)
                         .......++|+||+.+++|.+++.....                    ..+..+..++.||+.||.|||++||+|||
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD  280 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD  280 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence               2456789999999999999998865321                    12344678999999999999999999999


Q ss_pred             CCCCcEEEcc-CCCeEEeeeccccCCCCC-cccccccccCCCCCchhhhccCCCC---------------------CCch
Q 016991          135 LKPENLLLDS-YGNLKVSDFGLSALPQQG-VELLHTTCGTPNYVAPEVLSNRGYD---------------------GSAA  191 (379)
Q Consensus       135 lkp~NIll~~-~~~lkl~DfGl~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~---------------------~~~~  191 (379)
                      |||+|||++. ++.+||+|||++...... .......+|++.|+|||.+......                     +.++
T Consensus       281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~  360 (566)
T PLN03225        281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF  360 (566)
T ss_pred             CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence            9999999986 579999999999755432 2233567899999999976432211                     2356


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC---------------------CCCCCCHhHHHHHHHccCCCCC
Q 016991          192 DVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS---------------------CPFWFSTGATSLIHKILDPNPK  250 (379)
Q Consensus       192 DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~---------------------~p~~~s~~~~~li~~~L~~dP~  250 (379)
                      ||||+||+||+|+++..|++.. .......+......                     .....+....+||.+||+.||.
T Consensus       361 DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~  439 (566)
T PLN03225        361 DIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR  439 (566)
T ss_pred             ccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence            9999999999999987775432 22222222211111                     0011233456899999999999


Q ss_pred             CCCChHhHhcCccccccC
Q 016991          251 TRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       251 ~R~s~~~il~hp~f~~~~  268 (379)
                      +|||+.++|+||||+...
T Consensus       440 kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        440 QRISAKAALAHPYFDREG  457 (566)
T ss_pred             cCCCHHHHhCCcCcCCCC
Confidence            999999999999998643

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=8.2e-41  Score=286.94  Aligned_cols=251  Identities=27%  Similarity=0.467  Sum_probs=207.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--Ce
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASR--TK   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~--~~   83 (379)
                      ..++|++.+++|+|.|++||.|.+..+++.++||+++.-      ..+.+++|+.+|..|. ||||++++++..+.  ..
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence            467899999999999999999999999999999998542      2367999999999998 99999999998754  45


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~~~~~~  162 (379)
                      ..+++||+++.+....-   ..++...++.++.||+.||.||||+||+|||+||.|+++|.. ..++|+|+|++.+...+
T Consensus       110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~  186 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG  186 (338)
T ss_pred             chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence            67999999887654433   568889999999999999999999999999999999999964 57999999999887665


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCC-CCChHHHHHHH-------------HhcccC
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFG-ETDLPTLYKKI-------------NAAEFS  228 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~-~~~~~~~~~~i-------------~~~~~~  228 (379)
                       ...+..+.+..|-.||.+.....+...-|+||+||+|..|+..+-||- +.+.....-+|             ..-...
T Consensus       187 -~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~  265 (338)
T KOG0668|consen  187 -KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQID  265 (338)
T ss_pred             -ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccC
Confidence             334667788999999999888777799999999999999999998883 33322222111             111111


Q ss_pred             CC-------------C-----------CCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          229 CP-------------F-----------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       229 ~p-------------~-----------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ++             .           ..++++.||+.++|..|...|+|+.|++.||||...
T Consensus       266 Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  266 LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence            11             1           157999999999999999999999999999999753

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=334.64  Aligned_cols=249  Identities=24%  Similarity=0.359  Sum_probs=212.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCc-----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGE-----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ..-++.+.||+|+||.||.|.......     .||||.+.+.  .+.+....+.+|..+|+.++|||||+++|++.+...
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP  769 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence            356778999999999999998765433     3888877653  356667889999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           84 VYIILEFVTGGELFDKIVHQ-------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~-------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      .++++|||+||+|..+|++.       ..++......++.||+.|.+||++++++||||-..|+||+....+||+|||+|
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLA  849 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchh
Confidence            99999999999999999875       35788899999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccccccccc--CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH-HHHhcccCCCCC
Q 016991          157 ALPQQGVELLHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYK-KINAAEFSCPFW  232 (379)
Q Consensus       157 ~~~~~~~~~~~~~~g--t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~-~i~~~~~~~p~~  232 (379)
                      +-....+.......+  ...|||||.+.+..+ +.++||||+||+|||+++ |..||++.+..++.. ....+++..|..
T Consensus       850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iF-tskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~  928 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIF-TSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSY  928 (1025)
T ss_pred             HhhhhchheeccCccccceecCCHHHHhhccc-ccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCC
Confidence            832221111111112  246999999988666 599999999999999998 999999988776666 556667888999


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++..+.+++..|++.+|+.||++..|++
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHh
Confidence            9999999999999999999999999987

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=309.37  Aligned_cols=262  Identities=27%  Similarity=0.425  Sum_probs=218.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc----chHHHHHHHHHHHHHHhCCCCCcceEEEEEE-e
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL----KHRMVDQIKREISIMKIVRHPNIVRLHEVLA-S   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~----~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~-~   80 (379)
                      ..-+||-++..||+|+|+.||+|-+....+.||||+-..++.-    ++...+...+|.+|.+.|.||.||++|++|. +
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            3456899999999999999999999999999999997644321    2334566889999999999999999999996 5


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--CceeecCCCCcEEEcc---CCCeEEeeecc
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK--GVYHRDLKPENLLLDS---YGNLKVSDFGL  155 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~--gi~HrDlkp~NIll~~---~~~lkl~DfGl  155 (379)
                      .+..|-|+|||+|.+|.-++..+.-++|.+++.|+-||+.||.||...  .|||-||||.|||+-.   .|.+||+|||+
T Consensus       540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL  619 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL  619 (775)
T ss_pred             cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence            677899999999999999999999999999999999999999999965  6999999999999953   46899999999


Q ss_pred             ccCCCCC-------cccccccccCCCCCchhhhcc---CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHH--HH-
Q 016991          156 SALPQQG-------VELLHTTCGTPNYVAPEVLSN---RGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLY--KK-  221 (379)
Q Consensus       156 ~~~~~~~-------~~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~--~~-  221 (379)
                      +..++..       ........||-+|.+||.+.-   .+..+.++||||.|||+|.++.|+.||...... .+.  .. 
T Consensus       620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI  699 (775)
T KOG1151|consen  620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI  699 (775)
T ss_pred             hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence            9887652       223455679999999998743   234468999999999999999999999764322 222  12 


Q ss_pred             HHhcccCCC--CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          222 INAAEFSCP--FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       222 i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +...+..+|  +.+|+++.+||++||+..-..|+...++-.||+|...
T Consensus       700 lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  700 LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence            333445555  4589999999999999999999999999999999763

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=2.7e-38  Score=285.41  Aligned_cols=240  Identities=46%  Similarity=0.792  Sum_probs=208.1

Q ss_pred             CCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCChHHHH
Q 016991           21 TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI  100 (379)
Q Consensus        21 ~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l  100 (379)
                      +||.||+|.+..+|+.+|+|++........  .+.+.+|+..++.++|+||+++++.+......++++||+.+++|.+++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            589999999999999999999876543221  578999999999999999999999999999999999999999999999


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhh
Q 016991          101 VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV  180 (379)
Q Consensus       101 ~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~  180 (379)
                      .....++...+..++.+++.++.|||+.|++|+||+|.||+++.++.++|+|||.+....... ......++..|+|||.
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~pE~  157 (244)
T smart00220       79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPEYMAPEV  157 (244)
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcCCCCHHH
Confidence            876668999999999999999999999999999999999999999999999999987655432 3345668889999999


Q ss_pred             hccCCCCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHhcccCCCCC---CCHhHHHHHHHccCCCCCCCCChH
Q 016991          181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW---FSTGATSLIHKILDPNPKTRIRIE  256 (379)
Q Consensus       181 l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~-~~~~~~~~~i~~~~~~~p~~---~s~~~~~li~~~L~~dP~~R~s~~  256 (379)
                      +....+ +.++||||+|+++++|++|..||.. .+.....+.+.......+..   ++.++.+++.+||..||+.||++.
T Consensus       158 ~~~~~~-~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~  236 (244)
T smart00220      158 LLGKGY-GKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAE  236 (244)
T ss_pred             HccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHH
Confidence            976665 4799999999999999999999987 55555555555544443322   889999999999999999999999


Q ss_pred             hHhcCccc
Q 016991          257 GIRKHPWF  264 (379)
Q Consensus       257 ~il~hp~f  264 (379)
                      ++++||||
T Consensus       237 ~~~~~~~~  244 (244)
T smart00220      237 EALQHPFF  244 (244)
T ss_pred             HHhhCCCC
Confidence            99999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-39  Score=320.95  Aligned_cols=254  Identities=27%  Similarity=0.436  Sum_probs=220.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEE-----eC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLA-----SR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~-----~~   81 (379)
                      -+.|+|.++||.|.+|.||++.++.+|+..|+|+.+...-    .-+.+..|..+|+.+. |||++.+++++.     .+
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d----~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~   93 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED----EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG   93 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc----ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence            4679999999999999999999999999999999876532    2367888999998885 999999999985     45


Q ss_pred             CeEEEEEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 TKVYIILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      +.+|||||||.||+..|++..  ..++.|..+..+++.++.|+.+||.+.++|||||-.|||++.+|.+||+|||.+...
T Consensus        94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl  173 (953)
T KOG0587|consen   94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  173 (953)
T ss_pred             CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence            789999999999999999875  357899999999999999999999999999999999999999999999999999887


Q ss_pred             CCCcccccccccCCCCCchhhhccC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCC
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNR-----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPF  231 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~  231 (379)
                      ......-.+.+|||.|||||++...     .| +..+|+||||++..||-.|.+|+-+.......-+|.....   .-|.
T Consensus       174 dsT~grRnT~iGtP~WMAPEViac~e~~d~ty-d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~  252 (953)
T KOG0587|consen  174 DSTVGRRNTFIGTPYWMAPEVIACDESPDATY-DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPK  252 (953)
T ss_pred             ecccccccCcCCCcccccceeeecccCCCCCc-ccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchh
Confidence            7766667889999999999999543     23 4789999999999999999999987766554444443322   2345


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ..+.++.++|..||..|-.+||+..++++|||+..
T Consensus       253 kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  253 KWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             hHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            57899999999999999999999999999999974

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=1e-39  Score=292.49  Aligned_cols=257  Identities=30%  Similarity=0.472  Sum_probs=213.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC---
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR---   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~---   81 (379)
                      .....||.-++.+|.|+- .|-.|-+.-++++||+|.+..+ +......++..+|..++..++|+||++++.+|...   
T Consensus        13 ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l   90 (369)
T KOG0665|consen   13 FTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTL   90 (369)
T ss_pred             eeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccH
Confidence            344568888999999999 7778888889999999988776 44444567889999999999999999999998643   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           82 ---TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        82 ---~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                         ...|+|||++ ..+|.+.+.  -.++...+..++.|++.|++|||+.||+||||||+||++..++.+||.|||+++.
T Consensus        91 ~~~~e~y~v~e~m-~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~  167 (369)
T KOG0665|consen   91 EEFQEVYLVMELM-DANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLART  167 (369)
T ss_pred             HHHHhHHHHHHhh-hhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcc
Confidence               3689999999 557877776  4577888999999999999999999999999999999999999999999999986


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------  225 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------  225 (379)
                      .... -....++.|..|+|||++.+.+| .+.+||||+|||+.||+.|...|.+.+....+.++...             
T Consensus       168 e~~~-~~mtpyVvtRyyrapevil~~~~-ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~  245 (369)
T KOG0665|consen  168 EDTD-FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ  245 (369)
T ss_pred             cCcc-cccCchhheeeccCchheeccCC-cccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence            5543 35667889999999999999986 59999999999999999999999887755444443110             


Q ss_pred             -----------c---cC----CCCC-----------CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 -----------E---FS----CPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 -----------~---~~----~p~~-----------~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                 +   +.    +|.+           -+..+++|+.+||..||++|+|++++|+|||++-.+
T Consensus       246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~  317 (369)
T KOG0665|consen  246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWY  317 (369)
T ss_pred             HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeec
Confidence                       0   11    1111           244689999999999999999999999999998443

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=291.37  Aligned_cols=249  Identities=27%  Similarity=0.448  Sum_probs=200.9

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~-l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      -...||.|+||+|++..++.+|+..|||.++....  +....++..|.+. ++.-+.||||++|+.....+..|+.||.|
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM  145 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM  145 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence            35679999999999999999999999999987654  3344778888875 55667999999999999999999999999


Q ss_pred             CCCChHHHH------HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           92 TGGELFDKI------VHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        92 ~gg~L~~~l------~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      + .+| +.+      .++..++|...-.+.-..+.||.||.. ..|+|||+||+|||+|..|.+||||||.+.....+. 
T Consensus       146 d-~Sl-DklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si-  222 (361)
T KOG1006|consen  146 D-ISL-DKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI-  222 (361)
T ss_pred             h-hhH-HHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHH-
Confidence            4 343 222      234679999999999999999999985 589999999999999999999999999986543321 


Q ss_pred             cccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcccC---CCC---CCCH
Q 016991          165 LLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDL-PTLYKKINAAEFS---CPF---WFST  235 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~~~~---~p~---~~s~  235 (379)
                      ......|..+|+|||.+..  .+|+ -++|+||||++|||+.+|..|+.+-+. .+....+..+.++   .+.   .+|.
T Consensus       223 AkT~daGCrpYmAPERi~p~~~gyD-iRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~  301 (361)
T KOG1006|consen  223 AKTVDAGCRPYMAPERIDPSDKGYD-IRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSF  301 (361)
T ss_pred             HhhhccCCccccChhccCCccCCcc-hhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCH
Confidence            1234568999999999954  3454 899999999999999999999976443 2333334444432   222   2789


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+..+|.-||.+|-+.||...+++++||++..
T Consensus       302 ~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  302 SMVRFINTCLIKDRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             HHHHHHHHHhhcccccCcchhhhhcCchhhhh
Confidence            99999999999999999999999999999754

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=5.8e-38  Score=310.74  Aligned_cols=263  Identities=18%  Similarity=0.261  Sum_probs=190.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEEC----------------CCCcEEEEEEeecccccch-H----------HHHHHH
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNR----------------ETGESVAMKVLAKSTILKH-R----------MVDQIK   57 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~----------------~~~~~vaiK~i~~~~~~~~-~----------~~~~~~   57 (379)
                      ....++|++.++||+|+||.||+|...                ..++.||||.+........ +          ..+...
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~  220 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM  220 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence            356779999999999999999999752                3456899999864321110 0          011233


Q ss_pred             HHHHHHHhCCCCCc-----ceEEEEEEe--------CCeEEEEEeccCCCChHHHHHhc---------------------
Q 016991           58 REISIMKIVRHPNI-----VRLHEVLAS--------RTKVYIILEFVTGGELFDKIVHQ---------------------  103 (379)
Q Consensus        58 ~Ei~~l~~l~hp~I-----v~l~~~~~~--------~~~~~lv~E~~~gg~L~~~l~~~---------------------  103 (379)
                      .|+..+.+++|.++     +++++++..        .+..++|+||+++++|.+++...                     
T Consensus       221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~  300 (507)
T PLN03224        221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN  300 (507)
T ss_pred             HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence            46667777766544     666666542        35689999999999999888632                     


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-cccccccCCCCCchh
Q 016991          104 ---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-LLHTTCGTPNYVAPE  179 (379)
Q Consensus       104 ---~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-~~~~~~gt~~y~aPE  179 (379)
                         ..+++..++.++.|++.||.|||+.+|+||||||+|||++.++.+||+|||++........ ......+++.|+|||
T Consensus       301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE  380 (507)
T PLN03224        301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE  380 (507)
T ss_pred             cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence               1234567889999999999999999999999999999999999999999999865433211 111223478999999


Q ss_pred             hhccCCC--------------------C-CCchhHHHHHHHHHHHHhCCC-CCCCCCh-----------HHHHHHHHhcc
Q 016991          180 VLSNRGY--------------------D-GSAADVWSCGVILFVLMAGYL-PFGETDL-----------PTLYKKINAAE  226 (379)
Q Consensus       180 ~l~~~~~--------------------~-~~~~DiwSlGvil~~ll~g~~-Pf~~~~~-----------~~~~~~i~~~~  226 (379)
                      ++.....                    . ..+.||||+||++|+|++|.+ ||.+...           ...++.+....
T Consensus       381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~  460 (507)
T PLN03224        381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK  460 (507)
T ss_pred             hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence            9854321                    1 124799999999999999986 7754211           11122222333


Q ss_pred             cCCC--CCCCHhHHHHHHHccCCCC---CCCCChHhHhcCcccccc
Q 016991          227 FSCP--FWFSTGATSLIHKILDPNP---KTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ~~~p--~~~s~~~~~li~~~L~~dP---~~R~s~~~il~hp~f~~~  267 (379)
                      +.++  ...++.++||+.+||..+|   .+|+|++|+|+||||...
T Consensus       461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~  506 (507)
T PLN03224        461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE  506 (507)
T ss_pred             CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence            3333  3478999999999999766   789999999999999653

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=7.7e-40  Score=308.77  Aligned_cols=254  Identities=26%  Similarity=0.411  Sum_probs=212.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC------CCcceEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH------PNIVRLHEVL   78 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h------p~Iv~l~~~~   78 (379)
                      ..+-++|.+....|+|-||+|..|.+..-|+.||||+|.++.+    +.+.=.+|+.+|++|+.      -|+++++..|
T Consensus       428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~----M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F  503 (752)
T KOG0670|consen  428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV----MHKTGLKELEILKKLNDADPEDKFHCLRLFRHF  503 (752)
T ss_pred             hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH----HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh
Confidence            4556799999999999999999999999999999999987543    44566789999999973      4899999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeec
Q 016991           79 ASRTKVYIILEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFG  154 (379)
Q Consensus        79 ~~~~~~~lv~E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfG  154 (379)
                      ...+++|+|+|.+ ...|.+.+.+.|   .|....++.|++||+.||..|...||+|.||||.|||+++.. .+||||||
T Consensus       504 ~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfG  582 (752)
T KOG0670|consen  504 KHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFG  582 (752)
T ss_pred             hhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCc
Confidence            9999999999988 678999998755   588899999999999999999999999999999999999765 58999999


Q ss_pred             cccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCC--
Q 016991          155 LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW--  232 (379)
Q Consensus       155 l~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~--  232 (379)
                      .|......  ....+.-+..|+|||++.+.+|+ .+.|+||.||.||||.+|+..|++.+...+.+......-.+|..  
T Consensus       583 SA~~~~en--eitPYLVSRFYRaPEIiLG~~yd-~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Kml  659 (752)
T KOG0670|consen  583 SASFASEN--EITPYLVSRFYRAPEIILGLPYD-YPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKML  659 (752)
T ss_pred             cccccccc--cccHHHHHHhccCcceeecCccc-CCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHh
Confidence            88655432  23344566789999999999997 99999999999999999999999987665544332211111100  


Q ss_pred             ---------------------------------------------------C-------CHhHHHHHHHccCCCCCCCCC
Q 016991          233 ---------------------------------------------------F-------STGATSLIHKILDPNPKTRIR  254 (379)
Q Consensus       233 ---------------------------------------------------~-------s~~~~~li~~~L~~dP~~R~s  254 (379)
                                                                         +       -..+++||.+||..||.+|+|
T Consensus       660 RKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit  739 (752)
T KOG0670|consen  660 RKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT  739 (752)
T ss_pred             hhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC
Confidence                                                               1       124789999999999999999


Q ss_pred             hHhHhcCccccc
Q 016991          255 IEGIRKHPWFRK  266 (379)
Q Consensus       255 ~~~il~hp~f~~  266 (379)
                      +.++|+||||+.
T Consensus       740 ~nqAL~HpFi~~  751 (752)
T KOG0670|consen  740 VNQALKHPFITE  751 (752)
T ss_pred             HHHHhcCCcccC
Confidence            999999999963

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-40  Score=291.31  Aligned_cols=256  Identities=27%  Similarity=0.421  Sum_probs=213.6

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-----KV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-----~~   84 (379)
                      +.+-.+.||-|+||.||.+.+..+|+.||.|.+.. .+.+-...+.+.+|++.|..++|.|++...++.....     .+
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pn-vfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPN-VFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcch-HHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence            34556889999999999999999999999998754 3334445678999999999999999999998876543     47


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      |+++|.+ ..+|...|..-..++.+.++-+++||++||+|||+.||.||||||.|+|++.|..+||||||+++..+... 
T Consensus       133 YV~TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~  211 (449)
T KOG0664|consen  133 YVLTELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR  211 (449)
T ss_pred             HHHHHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh
Confidence            8889988 56888888888899999999999999999999999999999999999999999999999999998766532 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--------------------
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN--------------------  223 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~--------------------  223 (379)
                      ..+...+-|..|+|||++.+...++.+.||||.|||+.||+..+..|...+..+..+.|.                    
T Consensus       212 ~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~  291 (449)
T KOG0664|consen  212 LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKN  291 (449)
T ss_pred             hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHH
Confidence            334556778999999999998888899999999999999999999998777655544442                    


Q ss_pred             ---hcccCCCC-----------CCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          224 ---AAEFSCPF-----------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       224 ---~~~~~~p~-----------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                         ......|.           ....+..+++.+||.+||.+|++.++.+.|++....
T Consensus       292 H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  292 HVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             HhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence               11122221           234568899999999999999999999999997643

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-38  Score=303.43  Aligned_cols=204  Identities=31%  Similarity=0.580  Sum_probs=186.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHH-----HHHHHHHHHHhCC---CCCcceEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD-----QIKREISIMKIVR---HPNIVRLHEV   77 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~-----~~~~Ei~~l~~l~---hp~Iv~l~~~   77 (379)
                      ..+..|...+.||+|+||.|++|.++.+...|+||.|.|+++.....++     .+-.||.||..++   |+||++++++
T Consensus       558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf  637 (772)
T KOG1152|consen  558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF  637 (772)
T ss_pred             cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence            4567899999999999999999999999999999999987765443333     3678999999998   9999999999


Q ss_pred             EEeCCeEEEEEec-cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           78 LASRTKVYIILEF-VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        78 ~~~~~~~~lv~E~-~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      |++++++|++||- -+|-+|+++|..+..++|.++..+|+|++.|+++||+.||+|||||-||+.+|.+|-+||+|||.+
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsa  717 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSA  717 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccch
Confidence            9999999999996 468899999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFG  211 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~  211 (379)
                      .....  +...+.+||..|.|||++.+..|.|.+-|||+||++||.++..+.||.
T Consensus       718 a~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  718 AYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            76655  456788999999999999999999999999999999999999988874

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-37  Score=302.28  Aligned_cols=255  Identities=27%  Similarity=0.422  Sum_probs=218.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCC-C--cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRET-G--ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~-~--~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++..+.+.||+|+||.|++|.+... |  -.||||.+.......  ....|.+|+.+|.+|+|||++++|++..+ ..+
T Consensus       109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~  185 (1039)
T KOG0199|consen  109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPA  185 (1039)
T ss_pred             HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chh
Confidence            34667789999999999999998753 3  378999997665433  56889999999999999999999999988 678


Q ss_pred             EEEEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           85 YIILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      -+|+|.++.|+|++.+.+  ...|.......|+.||+.|+.||.+++.|||||-..|+|+-....+||+||||.+....+
T Consensus       186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n  265 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN  265 (1039)
T ss_pred             hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence            899999999999999987  346788889999999999999999999999999999999999999999999999877665


Q ss_pred             cccccc---cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhH
Q 016991          163 VELLHT---TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGA  237 (379)
Q Consensus       163 ~~~~~~---~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~  237 (379)
                      .+....   .--...|+|||.+....+. .++|+|++||++|||++ |+.||.+.....+.++|..++ +.-|..+|.++
T Consensus       266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFS-haSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedI  344 (1039)
T KOG0199|consen  266 EDMYVMAPQRKVPFAWCAPESLRHRKFS-HASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDI  344 (1039)
T ss_pred             CcceEecCCCcCcccccCHhHhcccccc-ccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHH
Confidence            443211   1123469999999887775 99999999999999998 899999999999998887543 67788999999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .+++..|+..+|..|||+..|...-+.+.
T Consensus       345 Y~imk~cWah~paDRptFsair~~~~l~e  373 (1039)
T KOG0199|consen  345 YQIMKNCWAHNPADRPTFSAIREDLVLAE  373 (1039)
T ss_pred             HHHHHHhccCCccccccHHHHHHhHHHHh
Confidence            99999999999999999999986655443

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-37  Score=298.40  Aligned_cols=246  Identities=27%  Similarity=0.427  Sum_probs=206.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCC----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRET----GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      .-.+.+.||+|-||.||.|....-    .-.||||.-+.+.  .....+.+..|..+|+.++||||++++|++.+. .++
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~W  466 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMW  466 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-cee
Confidence            344567899999999999986532    3468888775543  223468899999999999999999999999875 589


Q ss_pred             EEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +|||.++-|+|..++..+ ..++......|+.||..||.|||+..++||||-..|||+.....+||+|||+++.......
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y  546 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY  546 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence            999999999999999875 4788899999999999999999999999999999999999999999999999987765432


Q ss_pred             cccccccC--CCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHH
Q 016991          165 LLHTTCGT--PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSL  240 (379)
Q Consensus       165 ~~~~~~gt--~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~l  240 (379)
                      . +...|-  .-|||||-+.-..+ +.++|||-|||.+||++. |..||.+-......-.+.++ ++++|+.+++.+..|
T Consensus       547 Y-kaS~~kLPIKWmaPESINfRrF-TtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYsl  624 (974)
T KOG4257|consen  547 Y-KASRGKLPIKWMAPESINFRRF-TTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSL  624 (974)
T ss_pred             h-hccccccceeecCccccchhcc-cchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHH
Confidence            2 222332  35999999966665 599999999999999986 99999887666665555554 578999999999999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      +.+|+..+|.+||++.+|..
T Consensus       625 mskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  625 MSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             HHHHhccCcccCCcHHHHHH
Confidence            99999999999999877553

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-37  Score=287.22  Aligned_cols=130  Identities=28%  Similarity=0.444  Sum_probs=115.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----C---CCcceEEEEEE-
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-----H---PNIVRLHEVLA-   79 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----h---p~Iv~l~~~~~-   79 (379)
                      +||.+.++||-|-|++||+|.+..+.+.||+|+++....    ..+....||++|+.++     |   .+||++++.|. 
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh----YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh  153 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH----YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH  153 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH----HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence            799999999999999999999999999999999876433    4466788999999885     2   47999999996 


Q ss_pred             ---eCCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEc
Q 016991           80 ---SRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLD  143 (379)
Q Consensus        80 ---~~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~  143 (379)
                         ...++++|+|++ |..|+.+|...  ..++...++.|++||+.||.|||. .||||-||||||||+.
T Consensus       154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence               456899999999 88999999764  579999999999999999999996 5999999999999983

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.8e-37  Score=292.73  Aligned_cols=245  Identities=26%  Similarity=0.397  Sum_probs=213.6

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      ..+..+||.|.||.||.|.++.-.-.||||.++.+..    .++.+..|..+|+.++|||+|+++++|......|||+||
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEf  344 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEF  344 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEec
Confidence            3456889999999999999999999999998865442    357889999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           91 VTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        91 ~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |..|.|+++++...  .++.-....++.||.+|++||..+++|||||-..|.|+.++..+|++|||+++++..+....+.
T Consensus       345 M~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA  424 (1157)
T KOG4278|consen  345 MCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA  424 (1157)
T ss_pred             ccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc
Confidence            99999999998654  4666677888999999999999999999999999999999999999999999988764332222


Q ss_pred             cc-cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHcc
Q 016991          169 TC-GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~-gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L  245 (379)
                      -. -..-|.|||-+....+. .++|||+|||+|||+.+ |-.||++-+..++|..+..+ +..-|..+++.+..|++.|+
T Consensus       425 GAKFPIKWTAPEsLAyNtFS-iKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW  503 (1157)
T KOG4278|consen  425 GAKFPIKWTAPESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACW  503 (1157)
T ss_pred             CccCcccccCcccccccccc-cchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHh
Confidence            11 23469999999766664 89999999999999998 99999999999988877654 45678999999999999999


Q ss_pred             CCCCCCCCChHhHhc
Q 016991          246 DPNPKTRIRIEGIRK  260 (379)
Q Consensus       246 ~~dP~~R~s~~~il~  260 (379)
                      +++|+.||++.||-+
T Consensus       504 ~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  504 NWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             cCCcccCccHHHHHH
Confidence            999999999998765

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=4.1e-36  Score=324.35  Aligned_cols=237  Identities=20%  Similarity=0.254  Sum_probs=186.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ..|...+.||+|+||.||+|.+..+|..||||.+.....       ....|+..+++++|||||++++++.+.+..|+||
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~  762 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH  762 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence            345667789999999999999999999999998864321       1124688999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH---SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH---~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||+++|+|.+++.   .+++..+..++.|++.|++|||   +.+|+||||||+||+++.++..++. ||.......    
T Consensus       763 Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----  834 (968)
T PLN00113        763 EYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----  834 (968)
T ss_pred             eCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence            9999999999985   4889999999999999999999   6799999999999999998888775 665433221    


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh--HHHH--HHHHhc--------ccCC----
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL--PTLY--KKINAA--------EFSC----  229 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~--~~~~--~~i~~~--------~~~~----  229 (379)
                      .....||+.|+|||++.+..+ +.++||||+||++|||++|+.||+....  ....  ......        +...    
T Consensus       835 ~~~~~~t~~y~aPE~~~~~~~-~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  913 (968)
T PLN00113        835 DTKCFISSAYVAPETRETKDI-TEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV  913 (968)
T ss_pred             CCCccccccccCcccccCCCC-CcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence            123468899999999987666 5899999999999999999999954211  0111  110000        0000    


Q ss_pred             --CCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          230 --PFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       230 --p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                        +.....++.+++.+|++.||++|||+.++++.
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence              11112356789999999999999999999874

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-36  Score=287.13  Aligned_cols=248  Identities=23%  Similarity=0.323  Sum_probs=206.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+..++++||+|-||.|.+++-. .+..||+|+++......  ....+.+||++|.+++||||++++++|..++.+++++
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~--~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~  614 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKN--ARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT  614 (807)
T ss_pred             hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchh--HHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence            35678899999999999999875 37999999997765433  3578999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc-
Q 016991           89 EFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL-  165 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~-  165 (379)
                      ||++.|+|.+++..+.  ........+++.||++|++||.+.+++||||-+.|+|+|.++++||+|||+++..-.++.. 
T Consensus       615 EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~  694 (807)
T KOG1094|consen  615 EYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR  694 (807)
T ss_pred             HHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence            9999999999998863  3344556679999999999999999999999999999999999999999999854433211 


Q ss_pred             c-cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHh--------cccCCCCCCC
Q 016991          166 L-HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM--AGYLPFGETDLPTLYKKINA--------AEFSCPFWFS  234 (379)
Q Consensus       166 ~-~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll--~g~~Pf~~~~~~~~~~~i~~--------~~~~~p~~~s  234 (379)
                      . ...+-...|||||.+....+ +.++|+|++|+++||++  +.+.||...+..+..+....        .-+..|.-++
T Consensus       695 vqgr~vlpiRwmawEsillgkF-ttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp  773 (807)
T KOG1094|consen  695 VQGRAVLPIRWMAWESILLGKF-TTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACP  773 (807)
T ss_pred             eecceeeeeeehhHHHHHhccc-cchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCc
Confidence            1 11223468999999987776 49999999999999986  57899988776655544322        1245677789


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..+.+++-+|+..+-.+||+++++..
T Consensus       774 ~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  774 QGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            99999999999999999999999865

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-37  Score=299.97  Aligned_cols=251  Identities=27%  Similarity=0.399  Sum_probs=219.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .+.-.|.+.||.|.||.|+.|+.+..|   ..||||.++...  .+.....+..|..||-++.||||+++.++......+
T Consensus       628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv  705 (996)
T KOG0196|consen  628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV  705 (996)
T ss_pred             hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee
Confidence            445678899999999999999988766   489999986543  344557899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      -||.|||++|+|..+|+. +++++..+...+++.|+.|++||-+.|++||||-..|||++.+-.+|++|||++++...+.
T Consensus       706 MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence            999999999999999975 4789999999999999999999999999999999999999999999999999999876654


Q ss_pred             cccccccc---CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHH
Q 016991          164 ELLHTTCG---TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGAT  238 (379)
Q Consensus       164 ~~~~~~~g---t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  238 (379)
                      +...+..|   ...|.|||.+....+ ++++||||+||++||.++ |+-||-+.+..+..+.|..+ +++.|..++..+.
T Consensus       786 ~~~ytt~GGKIPiRWTAPEAIa~RKF-TsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~  864 (996)
T KOG0196|consen  786 EAAYTTLGGKIPIRWTAPEAIAYRKF-TSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALY  864 (996)
T ss_pred             CccccccCCccceeecChhHhhhccc-CchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHH
Confidence            33333333   247999999987776 599999999999999886 99999888888888888665 4667778999999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcC
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +|+..|+++|-..||.+.||+.+
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHH
Confidence            99999999999999999998863

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-36  Score=300.25  Aligned_cols=242  Identities=31%  Similarity=0.465  Sum_probs=192.9

Q ss_pred             eeeecccCCeE-EEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEecc
Q 016991           14 GRTIGEGTFAK-VRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        14 ~~~LG~G~~g~-V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      -+.+|.|+-|+ ||+|...  |+.||||.+-..      ....+.+||..|+.-+ |||||++|+.-.+....||+.|.|
T Consensus       514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             HHHcccCCCCcEEEEEeeC--CceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            36789999986 6888874  889999977432      3456789999998874 999999999999999999999999


Q ss_pred             CCCChHHHHHhcCC-C---CHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CC--CeEEeeeccccCCCCC
Q 016991           92 TGGELFDKIVHQGR-L---LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YG--NLKVSDFGLSALPQQG  162 (379)
Q Consensus        92 ~gg~L~~~l~~~~~-l---~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~--~lkl~DfGl~~~~~~~  162 (379)
                       -.+|.+++...+. +   .....+..+.|++.||++||+.+|+||||||.||||+.   ++  .++|+|||+|.....+
T Consensus       586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~  664 (903)
T KOG1027|consen  586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG  664 (903)
T ss_pred             -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence             5699999987411 1   11345788999999999999999999999999999976   34  6899999999876654


Q ss_pred             cc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcccCCC---CCCCH
Q 016991          163 VE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEFSCP---FWFST  235 (379)
Q Consensus       163 ~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~  235 (379)
                      ..   ...+..||-+|+|||++..... +.++||+|+||++|+.++ |..||++.-.  ....|..+.+..-   +....
T Consensus       665 ~sS~~r~s~~sGt~GW~APE~L~~~~~-~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L~~~~d~  741 (903)
T KOG1027|consen  665 KSSFSRLSGGSGTSGWQAPEQLREDRK-TQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHLEPLPDC  741 (903)
T ss_pred             cchhhcccCCCCcccccCHHHHhcccc-CcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeeeccCchH
Confidence            32   2456679999999999976554 479999999999999988 5999965432  2233544444321   11122


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ++.+||.+||.++|..||++.++|.||+|-..
T Consensus       742 eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  742 EAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            89999999999999999999999999999643

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-37  Score=298.23  Aligned_cols=259  Identities=28%  Similarity=0.427  Sum_probs=225.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      .--.+|++..++|.|+||.||+|+++.+++..|+|+++...-.   ...-+.+||-+++..+||||+.+++.+...+.++
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d---d~~~iqqei~~~~dc~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc---cccccccceeeeecCCCcChHHHHhhhhhhcCcE
Confidence            3456899999999999999999999999999999999875432   3466789999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ++||||.||+|.+.-.-.++++|.++...++..+.|++|||+.|-+|||||-.|||+++.|.+|++|||.+.........
T Consensus        89 icMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK  168 (829)
T ss_pred             EEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhh
Confidence            99999999999987777789999999999999999999999999999999999999999999999999998766554445


Q ss_pred             ccccccCCCCCchhhhc--cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC-----CCCHhHH
Q 016991          166 LHTTCGTPNYVAPEVLS--NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF-----WFSTGAT  238 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~-----~~s~~~~  238 (379)
                      .....|||.|||||+-.  .++.+...+|||++|+...|+---++|-.+...........+..+..|.     ..++.+.
T Consensus       169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh  248 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFH  248 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHH
Confidence            56788999999999862  3333458999999999999998888887666666655556666665543     3688899


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +|++.+|..+|++||+++.+|+|||....
T Consensus       249 ~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  249 NFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HHHHHHhcCCCccCCChhhheeceeeccc
Confidence            99999999999999999999999998654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=6e-36  Score=277.29  Aligned_cols=251  Identities=30%  Similarity=0.469  Sum_probs=200.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE---TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~   82 (379)
                      ....|.++++||+|+|++||+|.+..   .++.||+|.+....     ...++..|++.|..+. +.||+++.+++..++
T Consensus        34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            34578999999999999999999887   78999999886532     2367899999999986 899999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~  161 (379)
                      ...+|+||.+..+..++..   .++..+++.|++.++.||.++|++||+||||||.|+|.+. .+.-.|+|||++...+.
T Consensus       109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~  185 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG  185 (418)
T ss_pred             eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence            9999999999888777764   3678899999999999999999999999999999999984 56889999999761100


Q ss_pred             --------C------cc-------------------c-----------ccccccCCCCCchhhhccCCCCCCchhHHHHH
Q 016991          162 --------G------VE-------------------L-----------LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCG  197 (379)
Q Consensus       162 --------~------~~-------------------~-----------~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG  197 (379)
                              .      ..                   .           -....||++|+|||++...+-.++++||||.|
T Consensus       186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G  265 (418)
T KOG1167|consen  186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG  265 (418)
T ss_pred             hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence                    0      00                   0           00124999999999999888888999999999


Q ss_pred             HHHHHHHhCCCCCCCCCh-----HH---------HHH--------------------------------HHHhccc---C
Q 016991          198 VILFVLMAGYLPFGETDL-----PT---------LYK--------------------------------KINAAEF---S  228 (379)
Q Consensus       198 vil~~ll~g~~Pf~~~~~-----~~---------~~~--------------------------------~i~~~~~---~  228 (379)
                      ||+..++++..||-....     .+         +.+                                .+...+.   .
T Consensus       266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~  345 (418)
T KOG1167|consen  266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE  345 (418)
T ss_pred             ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence            999999999999933210     00         000                                0000000   0


Q ss_pred             ---CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          229 ---CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       229 ---~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                         .-..++..+.+|+.+||..||.+|+|++++|+||||.
T Consensus       346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             eccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence               0012466899999999999999999999999999997

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=100.00  E-value=6.1e-33  Score=244.10  Aligned_cols=213  Identities=41%  Similarity=0.749  Sum_probs=187.9

Q ss_pred             ecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCh
Q 016991           17 IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL   96 (379)
Q Consensus        17 LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L   96 (379)
                      ||+|++|.||++....+|+.+++|++.......  ..+.+.+|+..++.++|++|+++++++......++++|++.|++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            689999999999998889999999987654321  346789999999999999999999999999999999999999999


Q ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccccCCCCCcccccccccCCC
Q 016991           97 FDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPN  174 (379)
Q Consensus        97 ~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~  174 (379)
                      .+++... ..++...++.++.+++.++.+||+.|++|+||+|.||+++. ++.++|+|||.+..............+...
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  158 (215)
T cd00180          79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA  158 (215)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence            9998775 57899999999999999999999999999999999999999 899999999998765543222344567889


Q ss_pred             CCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCC
Q 016991          175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIR  254 (379)
Q Consensus       175 y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s  254 (379)
                      |.+||.+......+.+.|+|++|+++++|                               ..+.+++.+|++.||..||+
T Consensus       159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p~~R~~  207 (215)
T cd00180         159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDPEKRPS  207 (215)
T ss_pred             ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCcccCcC
Confidence            99999997653446899999999999999                               66789999999999999999


Q ss_pred             hHhHhcCc
Q 016991          255 IEGIRKHP  262 (379)
Q Consensus       255 ~~~il~hp  262 (379)
                      +.++++|+
T Consensus       208 ~~~l~~~~  215 (215)
T cd00180         208 AKEILEHL  215 (215)
T ss_pred             HHHHhhCC
Confidence            99999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-33  Score=286.08  Aligned_cols=247  Identities=25%  Similarity=0.405  Sum_probs=207.2

Q ss_pred             eeeeeeecccCCeEEEEEEECC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRE-------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT   82 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~   82 (379)
                      ..+.+.||+|+||.|++|....       ....||||........  ...+.+..|+.+|+.+ +||||+.+.+++...+
T Consensus       298 l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~  375 (609)
T KOG0200|consen  298 LKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACTQDG  375 (609)
T ss_pred             ccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence            3566799999999999997431       1468999998665433  4568899999999988 5999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~  146 (379)
                      .+++|+||+..|+|.+++...+                .++......++.||+.|++||++.+++||||-..|||+..+.
T Consensus       376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~  455 (609)
T KOG0200|consen  376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNK  455 (609)
T ss_pred             ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCC
Confidence            9999999999999999998755                388889999999999999999999999999999999999999


Q ss_pred             CeEEeeeccccCCCCCcccc-cccccCCC--CCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC-hHHHHHH
Q 016991          147 NLKVSDFGLSALPQQGVELL-HTTCGTPN--YVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETD-LPTLYKK  221 (379)
Q Consensus       147 ~lkl~DfGl~~~~~~~~~~~-~~~~gt~~--y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~-~~~~~~~  221 (379)
                      .+||+|||+++......... ....|+.+  |+|||.+....| +.++||||+||+|||+++ |..||.+-. ...+++.
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~f-t~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~  534 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVF-TSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEF  534 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcc-cccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHH
Confidence            99999999998544422221 22223333  999999988555 599999999999999998 999998744 4555666


Q ss_pred             HHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          222 INAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       222 i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +..+. ...|..+++++.++++.|++.+|..||++.++.+
T Consensus       535 l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  535 LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            65554 5788899999999999999999999999999876

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-34  Score=243.72  Aligned_cols=198  Identities=24%  Similarity=0.436  Sum_probs=163.6

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHH-hCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~-~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      ..-+..||+|++|.|-+.++..+|...|+|.+...-  ..+..+++.+|+.+.. ...+|.+|.+|+.+.....+++.||
T Consensus        48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME  125 (282)
T KOG0984|consen   48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME  125 (282)
T ss_pred             hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence            344678999999999999999999999999986532  2334577888888754 5579999999999999999999999


Q ss_pred             ccCCCChHH----HHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           90 FVTGGELFD----KIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        90 ~~~gg~L~~----~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      .++ .+|..    .+.+.+.++|..+-+++-.++.||.|||++ .++|||+||+|||++.+|++|+||||.+-....+..
T Consensus       126 ~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA  204 (282)
T KOG0984|consen  126 LMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA  204 (282)
T ss_pred             Hhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhH
Confidence            984 34432    234567899999999999999999999976 899999999999999999999999999865544211


Q ss_pred             cccccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          165 LLHTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                       .....|...|+|||.+..    .+|+ -++||||||+.++||.+++.||+.-
T Consensus       205 -kt~daGCkpYmaPEri~~e~n~~gY~-vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  205 -KTMDAGCKPYMAPERINPELNQKGYS-VKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             -HHHhcCCCccCChhhcCcccCcccce-eehhhhhhhhhhhhhhhcccccccc
Confidence             122568899999999842    3554 8999999999999999999999764

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=263.32  Aligned_cols=244  Identities=25%  Similarity=0.425  Sum_probs=192.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHH--HhCCCCCcceEEEEEEe----C
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM--KIVRHPNIVRLHEVLAS----R   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l--~~l~hp~Iv~l~~~~~~----~   81 (379)
                      -.+-.+.+.||+|.||.||+|.++  |+.||||++....      .+...+|.++.  ..|+|+||+.+++.-..    -
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~  281 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW  281 (513)
T ss_pred             hheeEEEEEecCccccceeecccc--CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence            346788999999999999999997  8999999985421      14456666665  46799999999876432    2


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeecCCCCcEEEccCCCeEEeee
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK--------GVYHRDLKPENLLLDSYGNLKVSDF  153 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~--------gi~HrDlkp~NIll~~~~~lkl~Df  153 (379)
                      ..+|+|.+|-+.|+|+|++.. ..++.+...+++..++.||.+||..        .|+|||||..||||..+|...|+|+
T Consensus       282 TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL  360 (513)
T KOG2052|consen  282 TQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  360 (513)
T ss_pred             EEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence            479999999999999999988 7899999999999999999999952        4999999999999999999999999


Q ss_pred             ccccCCCCC----cccccccccCCCCCchhhhccCC----CC-CCchhHHHHHHHHHHHHhC----------CCCCCC--
Q 016991          154 GLSALPQQG----VELLHTTCGTPNYVAPEVLSNRG----YD-GSAADVWSCGVILFVLMAG----------YLPFGE--  212 (379)
Q Consensus       154 Gl~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~~----~~-~~~~DiwSlGvil~~ll~g----------~~Pf~~--  212 (379)
                      |||......    +-..+..+||..|||||++...-    +. -..+||||+|.|+||+.-.          ++||.+  
T Consensus       361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V  440 (513)
T KOG2052|consen  361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV  440 (513)
T ss_pred             eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence            999765543    22346789999999999995431    11 1479999999999998642          678843  


Q ss_pred             ---CChHHHHHHHHh--cccCCCC-CCCHh----HHHHHHHccCCCCCCCCChHhHhc
Q 016991          213 ---TDLPTLYKKINA--AEFSCPF-WFSTG----ATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       213 ---~~~~~~~~~i~~--~~~~~p~-~~s~~----~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                         ++.+++.+.+..  .++.+|. |-|.+    +-.+++.|+..||.-|.|+--|.+
T Consensus       441 p~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK  498 (513)
T KOG2052|consen  441 PSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK  498 (513)
T ss_pred             CCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence               445555555433  3344554 44443    346899999999999999977665

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=100.00  E-value=1.7e-32  Score=245.35  Aligned_cols=217  Identities=42%  Similarity=0.720  Sum_probs=186.0

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      |++.+.||.|++|.||++.+..+++.+|+|.+......  ...+.+.+|+..++.++|+|++++++.+......++++||
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~   78 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY   78 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence            67889999999999999999988999999998765433  2457889999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-ccccc
Q 016991           91 VTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-ELLHT  168 (379)
Q Consensus        91 ~~gg~L~~~l~~~~~-l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~~~~~  168 (379)
                      +++++|.+++..... +++..+..++.|++.++.+||+.|++|+||+|.||+++.++.++|+|||.+....... .....
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (225)
T smart00221       79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT  158 (225)
T ss_pred             cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence            999999999987666 8999999999999999999999999999999999999999999999999887655432 12345


Q ss_pred             cccCCCCCchhhh-ccCCCCCCchhHHHHHHHHHHHHhCCCCCCC--CChHHHHHHHHhcccCCC
Q 016991          169 TCGTPNYVAPEVL-SNRGYDGSAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAAEFSCP  230 (379)
Q Consensus       169 ~~gt~~y~aPE~l-~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~--~~~~~~~~~i~~~~~~~p  230 (379)
                      ..++..|++||.+ ....+ +.++|+||||+++++|++|+.||..  .+...+.+.|..+.....
T Consensus       159 ~~~~~~~~~pe~~~~~~~~-~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  222 (225)
T smart00221      159 VKGTPFYLAPEVLLGGKGY-GEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPLLW  222 (225)
T ss_pred             eeccCCcCCHhHhcCCCCC-CchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCcccc
Confidence            5688899999998 44444 4699999999999999999999977  344467777776654433

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=279.10  Aligned_cols=246  Identities=24%  Similarity=0.349  Sum_probs=210.5

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGE----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+..+.||.|+||+||+|.+...|+    +||||++......  .....+.+|.-+|.+++|||++++++++.... +-|
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql  774 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL  774 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence            3456889999999999999865554    7899988765433  34578999999999999999999999998766 789


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      |++|+++|.|.++++.+ ..+-......|..||++|+.|||.++++||||-..||||..-.++||.|||++.........
T Consensus       775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e  854 (1177)
T KOG1025|consen  775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE  854 (1177)
T ss_pred             HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence            99999999999999764 57888889999999999999999999999999999999999999999999999887765444


Q ss_pred             cccccc--CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       166 ~~~~~g--t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .+...|  .+.|+|=|.+....| +.++||||+||++||++| |..|+++-...++...+..+ +++.|+-++-++..++
T Consensus       855 y~~~~gK~pikwmale~i~~~~~-thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~m  933 (1177)
T KOG1025|consen  855 YSAPGGKVPIKWMALESIRIRKY-THQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVM  933 (1177)
T ss_pred             ccccccccCcHHHHHHHhhccCC-CchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHH
Confidence            444443  345888888877666 599999999999999997 99999998888777776554 4788999999999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+|+..|+..||+++++-.
T Consensus       934 vkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  934 VKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HHHhccCcccCccHHHHHH
Confidence            9999999999999988654

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5e-33  Score=260.69  Aligned_cols=241  Identities=24%  Similarity=0.316  Sum_probs=187.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHH--hCCCCCcceEEEEEEeCC----
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK--IVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~--~l~hp~Iv~l~~~~~~~~----   82 (379)
                      ....+.+.||+|.||.||+|...  ++.||||++...      ..+.+..|-+|.+  .++|+||+++++.-...+    
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccc
Confidence            34567789999999999999875  699999998543      2345666666655  568999999998765444    


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------CCceeecCCCCcEEEccCCCeEEeee
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS---------KGVYHRDLKPENLLLDSYGNLKVSDF  153 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~---------~gi~HrDlkp~NIll~~~~~lkl~Df  153 (379)
                      .+++|+||.+.|+|.+++.. ..+++....+++..+++||+|||+         ..|+|||||..||||.++++..|+||
T Consensus       282 eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence            89999999999999999987 679999999999999999999996         35999999999999999999999999


Q ss_pred             ccccCCCC--CcccccccccCCCCCchhhhccCCCC-----CCchhHHHHHHHHHHHHhCC------------CCCC---
Q 016991          154 GLSALPQQ--GVELLHTTCGTPNYVAPEVLSNRGYD-----GSAADVWSCGVILFVLMAGY------------LPFG---  211 (379)
Q Consensus       154 Gl~~~~~~--~~~~~~~~~gt~~y~aPE~l~~~~~~-----~~~~DiwSlGvil~~ll~g~------------~Pf~---  211 (379)
                      |+|.....  ........+||..|||||++.+.--.     -...||||+|.|||||++.-            +||.   
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ev  440 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEV  440 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHh
Confidence            99976554  33445668999999999999654221     14689999999999999863            3332   


Q ss_pred             --CCChHHHHHHH--HhcccCCCCC-----CCHhHHHHHHHccCCCCCCCCChHhH
Q 016991          212 --ETDLPTLYKKI--NAAEFSCPFW-----FSTGATSLIHKILDPNPKTRIRIEGI  258 (379)
Q Consensus       212 --~~~~~~~~~~i--~~~~~~~p~~-----~s~~~~~li~~~L~~dP~~R~s~~~i  258 (379)
                        .++..++...+  .+.+..+|..     --..+.+.+..|++.||.-|+|+.-+
T Consensus       441 G~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv  496 (534)
T KOG3653|consen  441 GNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV  496 (534)
T ss_pred             cCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence              12333333332  2334444432     23457889999999999999998543

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=248.08  Aligned_cols=258  Identities=26%  Similarity=0.430  Sum_probs=200.0

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEE-EEeCCe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEV-LASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~-~~~~~~   83 (379)
                      ...+.|.|.+.||+|.||++.+++++.++..+++|.+.++..    ..+.+.+|..---.| .|.||+.-|++ |++.+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence            456789999999999999999999999999999999977543    235677777654444 48999998876 677788


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc--CCCeEEeeeccccCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~--~~~lkl~DfGl~~~~~~  161 (379)
                      +++++||++-|+|..-+.. ..+-|....+++.|+++|+.|+|+.+++|||||.+||||-.  .-++||||||+......
T Consensus        97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT  175 (378)
T ss_pred             EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence            9999999999999988866 56889999999999999999999999999999999999943  23799999998764432


Q ss_pred             CcccccccccCCCCCchhhhccC---CC-CCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHh-cccCCCC-
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNR---GY-DGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYKKINA-AEFSCPF-  231 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~---~~-~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~~i~~-~~~~~p~-  231 (379)
                      .   ....--+..|.+||++...   .+ ..+..|||.+|+|+|.+|+|.+||+....    ...+.++.. .....|. 
T Consensus       176 t---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~  252 (378)
T KOG1345|consen  176 T---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK  252 (378)
T ss_pred             e---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence            1   1122235579999987432   11 13678999999999999999999975332    222333332 2334444 


Q ss_pred             --CCCHhHHHHHHHccCCCCCCC---CChHhHhcCccccccCCCC
Q 016991          232 --WFSTGATSLIHKILDPNPKTR---IRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       232 --~~s~~~~~li~~~L~~dP~~R---~s~~~il~hp~f~~~~~~~  271 (379)
                        .+|+.+..+.++-|.++|++|   -++.......|..+.....
T Consensus       253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~~i~t~  297 (378)
T KOG1345|consen  253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEKLIKTV  297 (378)
T ss_pred             hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHhhhccc
Confidence              379999999999999999999   5666667778876554433

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.98  E-value=6.3e-34  Score=287.65  Aligned_cols=259  Identities=29%  Similarity=0.486  Sum_probs=210.2

Q ss_pred             cCe-eeeeeecccCCeEEEEEEECCCCcEEEEEEeec---ccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            9 AKY-EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         9 ~~y-~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~---~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ..| .....+|.|++|.|+.+......+.++.|....   ...........+..|+.+-..+.|||++.....+.+....
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~  396 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI  396 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence            345 456889999999999998887777777776542   1222223333477888888999999998887777776666


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      +-+||||++ +|+..+...+.++..++..++.||+.||+|+|+.||.|||+||+|++++.+|.+||+|||.+.....+. 
T Consensus       397 ~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  397 LQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            667999999 999999988899999999999999999999999999999999999999999999999999987765532 


Q ss_pred             ---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHH-------hcccCCCC
Q 016991          164 ---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY--KKIN-------AAEFSCPF  231 (379)
Q Consensus       164 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~--~~i~-------~~~~~~p~  231 (379)
                         ......+|+.+|+|||++.+..|+....||||+|++++.|.+|+.||.........  ....       .+...+-.
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  555 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS  555 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence               34567789999999999999999999999999999999999999999665433221  1111       11111122


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .++.+.+.+|.+||++||.+|+|+++|++.+||+...
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            3678889999999999999999999999999998754

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.97  E-value=2e-32  Score=289.23  Aligned_cols=199  Identities=17%  Similarity=0.225  Sum_probs=146.3

Q ss_pred             hCCC-CCcceEEEEE-------EeCCeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecC
Q 016991           65 IVRH-PNIVRLHEVL-------ASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL  135 (379)
Q Consensus        65 ~l~h-p~Iv~l~~~~-------~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDl  135 (379)
                      .++| +||+++++.+       .....+++++||+ +++|.+++.. ...+++.++..+++||+.||.|||++||+||||
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl  106 (793)
T PLN00181         28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV  106 (793)
T ss_pred             hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence            3445 5777777766       2334677888987 6799999965 346999999999999999999999999999999


Q ss_pred             CCCcEEEccCC-------------------CeEEeeeccccCCCCCc----------------ccccccccCCCCCchhh
Q 016991          136 KPENLLLDSYG-------------------NLKVSDFGLSALPQQGV----------------ELLHTTCGTPNYVAPEV  180 (379)
Q Consensus       136 kp~NIll~~~~-------------------~lkl~DfGl~~~~~~~~----------------~~~~~~~gt~~y~aPE~  180 (379)
                      ||+||||+..|                   .+|++|||+++......                ......+||+.|+|||+
T Consensus       107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  186 (793)
T PLN00181        107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE  186 (793)
T ss_pred             CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence            99999996544                   45555666554321000                00012468899999999


Q ss_pred             hccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-CCCCCCHhHHHHHHHccCCCCCCCCChHhHh
Q 016991          181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKILDPNPKTRIRIEGIR  259 (379)
Q Consensus       181 l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~s~~~il  259 (379)
                      +.+..| +.++|||||||+||||++|.+|+.....  ....+.....+ .+....+...+++.+||++||.+||++.+++
T Consensus       187 ~~~~~~-~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil  263 (793)
T PLN00181        187 DNGSSS-NCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELL  263 (793)
T ss_pred             hccCCC-CchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHh
Confidence            988777 5999999999999999999998754321  11122111111 1111355678999999999999999999999


Q ss_pred             cCcccccc
Q 016991          260 KHPWFRKN  267 (379)
Q Consensus       260 ~hp~f~~~  267 (379)
                      +||||...
T Consensus       264 ~h~~~~~~  271 (793)
T PLN00181        264 QSEFINEP  271 (793)
T ss_pred             hchhhhhh
Confidence            99999763

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.96  E-value=4.4e-28  Score=226.31  Aligned_cols=254  Identities=37%  Similarity=0.601  Sum_probs=213.6

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEEEEEe
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP-NIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp-~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      |.+.+.||.|+||.||.+.+.   ..+++|.+.............+.+|+.+++.+.|+ +|+++.+.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            788999999999999999987   88999999876655544567899999999999988 79999999988888999999


Q ss_pred             ccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCCcc-
Q 016991           90 FVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQGVE-  164 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~~~-  164 (379)
                      ++.++++.+.+....   .+++.....++.|++.++.|+|+.|++|||+||+||+++..+ .++++|||.+........ 
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            999999997777664   799999999999999999999999999999999999999988 799999999875444221 


Q ss_pred             -----cccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcccC-CCCC
Q 016991          165 -----LLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYKKINAAEFS-CPFW  232 (379)
Q Consensus       165 -----~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~~i~~~~~~-~p~~  232 (379)
                           .....+|+..|+|||.+...  .+.....|+||+|+++++++.|..||.....    ......+...... ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP  238 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence                 34677899999999999874  4556899999999999999999999877763    4555555544433 2222


Q ss_pred             CC--------HhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          233 FS--------TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       233 ~s--------~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ..        ..+.+++.+++..+|..|.+..+...++|....
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            22        478899999999999999999999988776543

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-31  Score=259.62  Aligned_cols=240  Identities=37%  Similarity=0.617  Sum_probs=211.4

Q ss_pred             eecccCCeEEEEEEE---CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEecc
Q 016991           16 TIGEGTFAKVRFAQN---RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~---~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      .+|.|+||.|++++.   .+.|..+|+|+..+......... .-..|..++...+ ||.+|+++..++..+..|++++|.
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            479999999988653   35688999999987665443322 4566778888887 999999999999999999999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccccc
Q 016991           92 TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG  171 (379)
Q Consensus        92 ~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~g  171 (379)
                      .||+|+..+.....+.+...+.+...++.+++++|+.||+|||+|++||+++.+|++++.|||+++......    ..||
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~----~~cg  155 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----IACG  155 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----hccc
Confidence            999999999988899999999999999999999999999999999999999999999999999987654321    2299


Q ss_pred             CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCC
Q 016991          172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKT  251 (379)
Q Consensus       172 t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~  251 (379)
                      |..|||||++.  +. ...+|.||+|+++++|++|..||..    +....|....+..|..+++.+++++..++..+|.+
T Consensus       156 t~eymApEI~~--gh-~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~n  228 (612)
T KOG0603|consen  156 TYEYRAPEIIN--GH-LSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNPEN  228 (612)
T ss_pred             chhhhhhHhhh--cc-CCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHH
Confidence            99999999997  33 4899999999999999999999987    67788888899999999999999999999999999


Q ss_pred             CCCh-----HhHhcCcccccc
Q 016991          252 RIRI-----EGIRKHPWFRKN  267 (379)
Q Consensus       252 R~s~-----~~il~hp~f~~~  267 (379)
                      |...     .++++|+||+..
T Consensus       229 rLg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  229 RLGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             HhccCcchhHHHhccchheee
Confidence            9855     799999999763

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=7.6e-30  Score=220.84  Aligned_cols=158  Identities=22%  Similarity=0.233  Sum_probs=128.3

Q ss_pred             CChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccC
Q 016991           94 GELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT  172 (379)
Q Consensus        94 g~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt  172 (379)
                      |+|.+++... ..+++.+++.++.||+.||.|||+++      ||+|||++.++.+|+  ||++......     ...||
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~-----~~~g~   67 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE-----QSRVD   67 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc-----cCCCc
Confidence            6889999764 46999999999999999999999999      999999999999999  9988765432     23689


Q ss_pred             CCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccC-------CCCCCCH--hHHHHHH
Q 016991          173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFS-------CPFWFST--GATSLIH  242 (379)
Q Consensus       173 ~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~-------~p~~~s~--~~~~li~  242 (379)
                      +.|+|||++.+..+. .++||||+||++|+|++|+.||...... .....+......       .+..++.  ++.++|.
T Consensus        68 ~~y~aPE~~~~~~~~-~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  146 (176)
T smart00750       68 PYFMAPEVIQGQSYT-EKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMR  146 (176)
T ss_pred             ccccChHHhcCCCCc-chhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHH
Confidence            999999999887764 8999999999999999999999765432 233333222111       1122343  6899999


Q ss_pred             HccCCCCCCCCChHhHhcCcccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      +||..||.+||++.++++|+|+.
T Consensus       147 ~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      147 VCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHhcccccccCHHHHHHHHHHH
Confidence            99999999999999999999975

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=2.2e-28  Score=233.10  Aligned_cols=169  Identities=22%  Similarity=0.231  Sum_probs=134.2

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECC-CCcEEEEEEeecccc--cchHHHHHHHHHHHHHHhCCCCCcce-EEEEEE
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVRHPNIVR-LHEVLA   79 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~-~~~~vaiK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~hp~Iv~-l~~~~~   79 (379)
                      .+...++|.+.+.||+|+||+||+|++.. +++.||||++.....  ......+.+.+|+.+|+.++|+||+. +++   
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---   89 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---   89 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---
Confidence            35678899999999999999999999876 678889998753211  12334567999999999999999985 443   


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecC-CCCcEEEccCCCeEEeeeccccC
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL-KPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDl-kp~NIll~~~~~lkl~DfGl~~~  158 (379)
                       .+..|+||||++|++|.. +.   ...   ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||++..
T Consensus        90 -~~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~  161 (365)
T PRK09188         90 -TGKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV  161 (365)
T ss_pred             -cCCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence             246899999999999963 21   111   2468899999999999999999999 99999999999999999999986


Q ss_pred             CCCCc--------ccccccccCCCCCchhhhcc
Q 016991          159 PQQGV--------ELLHTTCGTPNYVAPEVLSN  183 (379)
Q Consensus       159 ~~~~~--------~~~~~~~gt~~y~aPE~l~~  183 (379)
                      .....        ......++++.|+|||.+..
T Consensus       162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             cccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            54421        11245678999999999854

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-28  Score=221.86  Aligned_cols=251  Identities=23%  Similarity=0.310  Sum_probs=202.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCC-----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-e
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETG-----ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA-S   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~-----~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~-~   80 (379)
                      .-.|+++...+-+|+||.||.|.+++..     +.|-+|.+....  .+-....+..|-..+..+.|||+..+.++.. +
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~  359 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGASHPNLLSVLGVSIED  359 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence            3457888889999999999999876432     344455543322  2224566888888999999999999999875 5


Q ss_pred             CCeEEEEEeccCCCChHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           81 RTKVYIILEFVTGGELFDKIVH--------QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~--------~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      ...-++++.+..-|+|..++..        ...++..+...++.|+..|++|||+.||+|.||-..|.+||+.-.+||+|
T Consensus       360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltD  439 (563)
T KOG1024|consen  360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTD  439 (563)
T ss_pred             cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEecc
Confidence            5677888889888999998872        12467777888999999999999999999999999999999999999999


Q ss_pred             eccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccC
Q 016991          153 FGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFS  228 (379)
Q Consensus       153 fGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~  228 (379)
                      =.+++-.-..+.  ..........||+||.+.+..|. .++|+|||||+||||++ |+.|+.+-+..++..-+..+ +..
T Consensus       440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~ys-sasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRla  518 (563)
T KOG1024|consen  440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYS-SASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLA  518 (563)
T ss_pred             chhccccCcccccccCCCCCCcccccCHHHHhhhhhc-chhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceec
Confidence            988874333211  11122234579999999998886 99999999999999998 99999988888887777655 467


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .|..+++++..++..|+..+|+.||+++|+..
T Consensus       519 QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  519 QPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            78999999999999999999999999999764

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-26  Score=219.36  Aligned_cols=247  Identities=23%  Similarity=0.309  Sum_probs=193.0

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCC-cEEEEEEeecccccchHHHHHHHHHHHHHHhCCC----CCcceEEEEE-EeCCe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETG-ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH----PNIVRLHEVL-ASRTK   83 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h----p~Iv~l~~~~-~~~~~   83 (379)
                      +|.+.+.||+|+||.||.+.+..++ ..+|+|+.........   ..+..|+.++..+..    +++..+++.. .....
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence            8999999999999999999998775 6889998765432221   267889999998873    6999999999 57888


Q ss_pred             EEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-----CCeEEeeeccc
Q 016991           84 VYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-----GNLKVSDFGLS  156 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-----~~lkl~DfGl~  156 (379)
                      -|+||+.+ |.+|.++....  +.++...+.+++.|++.+|++||+.|++||||||+|+++...     ..+.|.|||++
T Consensus        96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99999998 99999977543  589999999999999999999999999999999999999865     35999999999


Q ss_pred             cCCC--CCc-c------c-ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH---H
Q 016991          157 ALPQ--QGV-E------L-LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI---N  223 (379)
Q Consensus       157 ~~~~--~~~-~------~-~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i---~  223 (379)
                      +...  ... .      . .....||..|+++.+..+... +.+.|+||++.++.+++.|.+||..........+.   .
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~-~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~  253 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQ-GRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP  253 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCcc-CCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence            8322  111 1      1 123459999999999987665 59999999999999999999999775532222222   2


Q ss_pred             hcccC--CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          224 AAEFS--CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       224 ~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .....  .....+.++.++...+-..+...+|....+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  254 RKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             hhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            21111  223345677777777777888999988877654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.94  E-value=3.2e-27  Score=239.92  Aligned_cols=220  Identities=32%  Similarity=0.580  Sum_probs=176.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..-.+|..++++..|+||.||+++++.+.+.+|+| ++++..        +.+.  ++.....|.+|             
T Consensus        80 p~e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l--------ilRn--ilt~a~npfvv-------------  135 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL--------ILRN--ILTFAGNPFVV-------------  135 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccccccchhhc-ccccch--------hhhc--cccccCCccee-------------
Confidence            34578999999999999999999999999999995 444321        1111  34444455554             


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC---
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG---  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~---  162 (379)
                              |+=...+..-+.++.+.        +.+++|+|+-||+|||+||+|++|..-|++|++|||++......   
T Consensus       136 --------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at  199 (1205)
T KOG0606|consen  136 --------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT  199 (1205)
T ss_pred             --------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence                    33344455556666554        78999999999999999999999999999999999987532110   


Q ss_pred             ------------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC
Q 016991          163 ------------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP  230 (379)
Q Consensus       163 ------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p  230 (379)
                                  .-.....||||.|+||||+...+| |.++|+|++|+|+|+.+.|..||.+.+.++++.........+|
T Consensus       200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgy-gkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp  278 (1205)
T KOG0606|consen  200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGY-GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP  278 (1205)
T ss_pred             hhhhcchHHHHHHhhhccccCCccccChhhhhhhcc-CCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence                        001234599999999999999888 6999999999999999999999999999999988877777776


Q ss_pred             CC---CCHhHHHHHHHccCCCCCCCC---ChHhHhcCccccc
Q 016991          231 FW---FSTGATSLIHKILDPNPKTRI---RIEGIRKHPWFRK  266 (379)
Q Consensus       231 ~~---~s~~~~~li~~~L~~dP~~R~---s~~~il~hp~f~~  266 (379)
                      ..   +.++++++|.++|+.+|..|.   .+-++.+|+||+.
T Consensus       279 E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~  320 (1205)
T KOG0606|consen  279 EEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQL  320 (1205)
T ss_pred             ccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceee
Confidence            54   689999999999999999997   4568899999975

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=8.2e-26  Score=196.02  Aligned_cols=247  Identities=20%  Similarity=0.282  Sum_probs=197.6

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCC
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLHEVLASRT   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~~~   82 (379)
                      .....++|+++++||.|+||.+|+|.+..+|+.||||+-.... ..    .++..|..+.+.|++ ..|..+.-+..+..
T Consensus        10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~   84 (341)
T KOG1163|consen   10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KH----PQLLYESKVYRILQGGVGIPHIRHYGTEKD   84 (341)
T ss_pred             hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CC----cchhHHHHHHHHhccCCCCchhhhhccccc
Confidence            3467789999999999999999999999999999999865432 11    457789999999985 67888888888889


Q ss_pred             eEEEEEeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeEEeeeccccC
Q 016991           83 KVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSAL  158 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lkl~DfGl~~~  158 (379)
                      +-.+||+.. |.+|.+... -...++...+.-++-|++.-++|+|.++++||||||+|+|..-+   ..+.++|||+|..
T Consensus        85 ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen   85 YNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             cceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence            999999998 888887764 34678999999999999999999999999999999999999643   4689999999976


Q ss_pred             CCCCc-------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcccC
Q 016991          159 PQQGV-------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEFS  228 (379)
Q Consensus       159 ~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~~  228 (379)
                      .....       .......||..|.+--...+... +..-|+-|+|.+|..+.-|.+||++-..   .+-+.+|.....+
T Consensus       164 y~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eq-SRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s  242 (341)
T KOG1163|consen  164 YRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQ-SRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS  242 (341)
T ss_pred             hccccccccCccccCCccceeeeehhhhhhhhhhh-hhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC
Confidence            54311       12234569999998776655443 4788999999999999999999988543   4556677666665


Q ss_pred             CCC-----CCCHhHHHHHHHccCCCCCCCCChHh
Q 016991          229 CPF-----WFSTGATSLIHKILDPNPKTRIRIEG  257 (379)
Q Consensus       229 ~p~-----~~s~~~~~li~~~L~~dP~~R~s~~~  257 (379)
                      .|.     .++.++.-.+.-|-..--..-|...-
T Consensus       243 ~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~y  276 (341)
T KOG1163|consen  243 TPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMY  276 (341)
T ss_pred             CCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHH
Confidence            553     46888888888887776666666544

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.93  E-value=1.9e-25  Score=198.95  Aligned_cols=173  Identities=16%  Similarity=0.212  Sum_probs=135.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHH------HHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ------IKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~------~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      .-++|++.+.||.|+||.||++..  ++..+|||++.......+.....      +.+|+..+.+++||+|..+.+++..
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            457999999999999999999755  46789999997654444444333      6799999999999999999988653


Q ss_pred             C--------CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           81 R--------TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        81 ~--------~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      .        +..+++|||++|.+|.+..    .+++    ....+++.+|..||+.|++|||+||+||+++.+| ++|+|
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liD  177 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIID  177 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEE
Confidence            3        3589999999999997763    2333    2456999999999999999999999999999988 99999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHH
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVL  203 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~l  203 (379)
                      ||..........            ...+.....|. .++|+||||+++..+
T Consensus       178 fg~~~~~~e~~a------------~d~~vler~y~-~~~di~~lg~~~~~~  215 (232)
T PRK10359        178 LSGKRCTAQRKA------------KDRIDLERHYG-IKNEIKDLGYYLLIY  215 (232)
T ss_pred             CCCcccccchhh------------HHHHHHHhHhc-ccccccceeEeehHH
Confidence            998764432111            11134455565 799999999987654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.93  E-value=3.4e-25  Score=194.29  Aligned_cols=143  Identities=22%  Similarity=0.273  Sum_probs=114.1

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH-----------------------HHHHHHHHHHHHHhCCCCC
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR-----------------------MVDQIKREISIMKIVRHPN   70 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~-----------------------~~~~~~~Ei~~l~~l~hp~   70 (379)
                      .+.||+|+||.||+|.+. +|+.||||+++........                       ......+|+.++..+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999997 8999999999764321100                       0123456999999998887


Q ss_pred             cceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCceeecCCCCcEEEccCCCeE
Q 016991           71 IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC-HSKGVYHRDLKPENLLLDSYGNLK  149 (379)
Q Consensus        71 Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~yl-H~~gi~HrDlkp~NIll~~~~~lk  149 (379)
                      +.....+... . .++||||++|+++.......+.+++..+..++.|++.+|.|+ |+.||+||||||+|||++ ++.++
T Consensus        81 v~~p~~~~~~-~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~  157 (190)
T cd05147          81 IPCPEPILLK-S-HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY  157 (190)
T ss_pred             CCCCcEEEec-C-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence            7554433222 2 389999999887766655567899999999999999999999 799999999999999998 48899


Q ss_pred             EeeeccccCCC
Q 016991          150 VSDFGLSALPQ  160 (379)
Q Consensus       150 l~DfGl~~~~~  160 (379)
                      |+|||+|....
T Consensus       158 LiDFG~a~~~~  168 (190)
T cd05147         158 IIDVSQSVEHD  168 (190)
T ss_pred             EEEccccccCC
Confidence            99999986443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-24  Score=195.34  Aligned_cols=211  Identities=22%  Similarity=0.354  Sum_probs=176.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .|+++++||+|+||+.+.|.+.-++++||||.-....     .+.+++.|.+..+.|. .++|...|.+-...-+-.+|+
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi  103 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI  103 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence            7999999999999999999999999999999654322     3467899999999886 699999998888888889999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-----CeEEeeeccccCCCCC
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-----NLKVSDFGLSALPQQG  162 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-----~lkl~DfGl~~~~~~~  162 (379)
                      |.+ |.+|.|+..- ..+++.+.+..++.|++.-++|+|++.+|.|||||+|+||...+     .+.++|||++......
T Consensus       104 dLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  104 DLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             hhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence            998 8888887765 45799999999999999999999999999999999999997544     5899999999876543


Q ss_pred             cc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhccc
Q 016991          163 VE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD---LPTLYKKINAAEF  227 (379)
Q Consensus       163 ~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---~~~~~~~i~~~~~  227 (379)
                      ..       ......||..||+=-...+... +..-|+-|||-++++.|-|.+||.+..   .-+-|++|....-
T Consensus       183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQ-SRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr  256 (449)
T KOG1165|consen  183 KTKQHIPYREHKSLSGTARYMSINTHLGREQ-SRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKR  256 (449)
T ss_pred             cccccCccccccccccceeeeEeeccccchh-hhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccc
Confidence            22       2234569999999777777665 488999999999999999999998754   3456667755443

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.92  E-value=2e-24  Score=189.66  Aligned_cols=145  Identities=19%  Similarity=0.271  Sum_probs=116.9

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch-----------------------HHHHHHHHHHHHHHhCCCC
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH-----------------------RMVDQIKREISIMKIVRHP   69 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~-----------------------~~~~~~~~Ei~~l~~l~hp   69 (379)
                      +.+.||+|++|.||+|.+. +|+.||||+++.......                       .....+.+|+..+.++.|+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            4578999999999999987 899999999986521100                       0123356899999999999


Q ss_pred             CcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCe
Q 016991           70 NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNL  148 (379)
Q Consensus        70 ~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~l  148 (379)
                      +|.....+....  .|+||||++|+++........++++..+..++.|++.++.++|+ .||+||||||+||+++ ++.+
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~  156 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP  156 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence            886555544433  48999999988665544455778899999999999999999999 9999999999999999 7999


Q ss_pred             EEeeeccccCCCC
Q 016991          149 KVSDFGLSALPQQ  161 (379)
Q Consensus       149 kl~DfGl~~~~~~  161 (379)
                      +|+|||++.....
T Consensus       157 ~liDFG~a~~~~~  169 (190)
T cd05145         157 YIIDVSQAVELDH  169 (190)
T ss_pred             EEEEcccceecCC
Confidence            9999999875543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.92  E-value=1.2e-24  Score=199.46  Aligned_cols=234  Identities=27%  Similarity=0.374  Sum_probs=153.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC----------CCcceEEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH----------PNIVRLHEVLA   79 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h----------p~Iv~l~~~~~   79 (379)
                      ....++.||.|+++.||.+.+.+||+.+|+|+............+++++|.-....+.+          -.++..++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            45678899999999999999999999999999876654444456777777755555332          23444444432


Q ss_pred             e---------C---C-----eEEEEEeccCCCChHHHHH---hcCCCC---HHHH-HHHHHHHHHHHHHHHHCCceeecC
Q 016991           80 S---------R---T-----KVYIILEFVTGGELFDKIV---HQGRLL---ENDC-RRYFQQLIDAVAHCHSKGVYHRDL  135 (379)
Q Consensus        80 ~---------~---~-----~~~lv~E~~~gg~L~~~l~---~~~~l~---e~~~-~~~~~qil~~l~ylH~~gi~HrDl  135 (379)
                      -         .   +     +.+++|+-+ .++|.+.+.   ......   ...+ ..+..|++..+++||+.|++|+||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence            1         1   1     236677766 567766653   222221   1223 344589999999999999999999


Q ss_pred             CCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCC-------CCCCchhHHHHHHHHHHHHhCCC
Q 016991          136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG-------YDGSAADVWSCGVILFVLMAGYL  208 (379)
Q Consensus       136 kp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-------~~~~~~DiwSlGvil~~ll~g~~  208 (379)
                      +|+|++++.+|.+.|+||+........   ......+..|.+||......       ..+.+.|.|+||+++|.|++|.+
T Consensus       172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l  248 (288)
T PF14531_consen  172 KPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL  248 (288)
T ss_dssp             SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred             ceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence            999999999999999999876544332   11134557899999875431       23578999999999999999999


Q ss_pred             CCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHHccCCCCCCC
Q 016991          209 PFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       209 Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R  252 (379)
                      ||+..........    .+ .|. .++..+++||..||++||.+|
T Consensus       249 Pf~~~~~~~~~~~----~f~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  249 PFGLSSPEADPEW----DFSRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             STCCCGGGSTSGG----GGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCCccccccc----cchhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9986543221110    22 233 789999999999999999988

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.91  E-value=5e-25  Score=224.31  Aligned_cols=238  Identities=26%  Similarity=0.426  Sum_probs=183.1

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccc-ccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-ILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .|...+.||.+.|=+|.+|.+.+ |. |+||++-+.. ...-....+..+|++ ....++||.+.+.-+...+...|+|-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence            68889999999999999998864 44 8999986643 222223344445566 67779999999998888888899999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccC--CCCCcc--
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVE--  164 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~--~~~~~~--  164 (379)
                      +|. -.+|+|++..+.-+..-+-+.|+.||+.||.-||..||+|||||.|||||+.-+-+.|+||..-+-  ..+++.  
T Consensus       101 qyv-khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  101 QYV-KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             HHH-hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence            998 458999998877788888899999999999999999999999999999999988999999975321  111111  


Q ss_pred             ---cccccccCCCCCchhhhccCC----------CCCCchhHHHHHHHHHHHHh-CCCCCCCC-----------ChHHHH
Q 016991          165 ---LLHTTCGTPNYVAPEVLSNRG----------YDGSAADVWSCGVILFVLMA-GYLPFGET-----------DLPTLY  219 (379)
Q Consensus       165 ---~~~~~~gt~~y~aPE~l~~~~----------~~~~~~DiwSlGvil~~ll~-g~~Pf~~~-----------~~~~~~  219 (379)
                         ...+...-.+|.|||.+...+          ..+++.||||+||+++||++ |++||.-.           +.....
T Consensus       180 f~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~L  259 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLL  259 (1431)
T ss_pred             ceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHH
Confidence               112223344799999885532          12568999999999999987 89999321           122222


Q ss_pred             HHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          220 KKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       220 ~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++|.          +..++.+|..|++.||++|.++++.|+.
T Consensus       260 e~Ie----------d~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  260 EKIE----------DVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HhCc----------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence            2222          4578999999999999999999999985

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=200.63  Aligned_cols=249  Identities=24%  Similarity=0.373  Sum_probs=174.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCC-----------------------------------cEEEEEEeecccccch
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETG-----------------------------------ESVAMKVLAKSTILKH   50 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~-----------------------------------~~vaiK~i~~~~~~~~   50 (379)
                      -.+++|+|+..||+|..+.||.|....+|                                   -+.|||++-.-...+.
T Consensus       154 FtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~  233 (598)
T KOG4158|consen  154 FTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSG  233 (598)
T ss_pred             cchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCc
Confidence            35778999999999999999998754322                                   1346666543222211


Q ss_pred             --HHHHHHHHHHH------HH--------Hh--------CCCCCcceEEEEEEe--------------------------
Q 016991           51 --RMVDQIKREIS------IM--------KI--------VRHPNIVRLHEVLAS--------------------------   80 (379)
Q Consensus        51 --~~~~~~~~Ei~------~l--------~~--------l~hp~Iv~l~~~~~~--------------------------   80 (379)
                        ...+..-+|..      .+        +.        -+|||||++..+|.+                          
T Consensus       234 ~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g  313 (598)
T KOG4158|consen  234 DAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAG  313 (598)
T ss_pred             hHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccC
Confidence              11122222211      00        11        259999999887632                          


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc--cCC--CeEEeeecc
Q 016991           81 -RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD--SYG--NLKVSDFGL  155 (379)
Q Consensus        81 -~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~--~~~--~lkl~DfGl  155 (379)
                       ...+|+||... ..+|..++-. ...+....+-++.|+++|+.|||++||.|||+|.+|||+.  +++  .+.|+|||.
T Consensus       314 ~~~tlylvMkrY-~~tLr~yl~~-~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGC  391 (598)
T KOG4158|consen  314 EPKTLYLVMKRY-RQTLREYLWT-RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGC  391 (598)
T ss_pred             CCceEEEehhcc-hhhHHHHHhc-CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccce
Confidence             23699999876 4588888765 4566777888999999999999999999999999999994  333  589999997


Q ss_pred             ccCCCC-Cc--c---cccccccCCCCCchhhhccCCC-----CCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH--HHH
Q 016991          156 SALPQQ-GV--E---LLHTTCGTPNYVAPEVLSNRGY-----DGSAADVWSCGVILFVLMAGYLPFGETDLPTLY--KKI  222 (379)
Q Consensus       156 ~~~~~~-~~--~---~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~--~~i  222 (379)
                      +--.+. +-  .   ..-..-|.-..+|||+....+-     +-.++|.|++|.+.||++....||.+.....+.  .--
T Consensus       392 cLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq  471 (598)
T KOG4158|consen  392 CLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ  471 (598)
T ss_pred             eeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh
Confidence            643222 10  1   1123347788999999854321     236899999999999999999999775433221  111


Q ss_pred             HhcccCCCCCCCHhHHHHHHHccCCCCCCCCChH
Q 016991          223 NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE  256 (379)
Q Consensus       223 ~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~  256 (379)
                      ...-...|..+++.+++|+..+|++||++|++..
T Consensus       472 e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  472 ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             hhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            2233567888999999999999999999999864

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=5.7e-26  Score=229.93  Aligned_cols=258  Identities=33%  Similarity=0.551  Sum_probs=216.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...|.+.+.||+|+|+.|-.+.+.. +...+|+|.+.... ......+++..|..+-+.+. |+|++.+++...+....+
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence            5679999999999999998888754 34566667665443 33445677888999988887 999999999999999999


Q ss_pred             EEEeccCCCChHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HCCceeecCCCCcEEEccCC-CeEEeeeccccCCCC
Q 016991           86 IILEFVTGGELFDKI-VHQG-RLLENDCRRYFQQLIDAVAHCH-SKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQ  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l-~~~~-~l~e~~~~~~~~qil~~l~ylH-~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~  161 (379)
                      ++++|..|+++++.+ .... ..+...+..++.|+..++.|+| ..++.|||+||+|.+++.++ .++++|||++.....
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            999999999999999 6655 7888899999999999999999 99999999999999999999 999999999986554


Q ss_pred             ---Cccccccccc-CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhc--c--cCCCCC
Q 016991          162 ---GVELLHTTCG-TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT-LYKKINAA--E--FSCPFW  232 (379)
Q Consensus       162 ---~~~~~~~~~g-t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~-~~~~i~~~--~--~~~p~~  232 (379)
                         ........|| ++.|+|||...+..|.++..|+||+|+++..+++|..||....... .+..+...  .  ......
T Consensus       178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (601)
T KOG0590|consen  178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNS  257 (601)
T ss_pred             cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcccc
Confidence               2345667889 9999999999988888999999999999999999999997654332 11112111  1  233345


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++..+.+++.++|..+|..|.+.+++..+||+..
T Consensus       258 ~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  258 ISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             CChhhhhcccccccCCchhccccccccccccccc
Confidence            7889999999999999999999999999999987

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=1e-22  Score=177.92  Aligned_cols=190  Identities=17%  Similarity=0.191  Sum_probs=141.9

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH-HHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR-MVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~-~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ..+...|++|+||+||++..  .+..++.+.+.....-... ....+.+|+++|+.+. |++|.+++++    +..|++|
T Consensus         4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm   77 (218)
T PRK12274          4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR   77 (218)
T ss_pred             cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence            34678999999999997765  5778887766544332111 1235789999999996 5889999886    3479999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecC-CCCcEEEccCCCeEEeeeccccCCCCCccc--
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL-KPENLLLDSYGNLKVSDFGLSALPQQGVEL--  165 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDl-kp~NIll~~~~~lkl~DfGl~~~~~~~~~~--  165 (379)
                      ||+.|.+|...+..      . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||++.........  
T Consensus        78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r  150 (218)
T PRK12274         78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR  150 (218)
T ss_pred             eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence            99999998654321      1 2357889999999999999999999 799999999999999999999855443211  


Q ss_pred             -c----------cccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          166 -L----------HTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       166 -~----------~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                       +          .-...++.|.+|+.-.-.. ..-...++++.|.-+|.++|+..|+-++
T Consensus       151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence             0          1123678889998653221 1124678889999999999999887544

>PRK10345 hypothetical protein; Provisional

Probab=99.89  E-value=2e-22  Score=178.66  Aligned_cols=134  Identities=19%  Similarity=0.202  Sum_probs=108.3

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEeCC---eEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-----RHPNIVRLHEVLASRT---KVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-----~hp~Iv~l~~~~~~~~---~~~   85 (379)
                      .+.||+|+||.||.  +..++.. +||++......   ..+.+.+|+.+++.+     .||||+++++++.++.   .++
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            47899999999995  7777766 69998764322   346789999999999     5799999999998863   444


Q ss_pred             -EEEec--cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHCCceeecCCCCcEEEccC----CCeEEeeeccc
Q 016991           86 -IILEF--VTGGELFDKIVHQGRLLENDCRRYFQQLIDAV-AHCHSKGVYHRDLKPENLLLDSY----GNLKVSDFGLS  156 (379)
Q Consensus        86 -lv~E~--~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l-~ylH~~gi~HrDlkp~NIll~~~----~~lkl~DfGl~  156 (379)
                       +|+||  +.+++|.+++.+ +.+++.  ..++.|++.++ +|||+++|+||||||+|||++.+    +.++|+||+.+
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence             78999  557999999966 456666  35678888777 99999999999999999999743    37999995533

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.88  E-value=5e-23  Score=181.61  Aligned_cols=245  Identities=20%  Similarity=0.307  Sum_probs=199.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +..++...+..+|.+.-.|+.|+|++.  |..++.|++....+.. ...+.+..|.-.|+.+.||||+.+++.+.+..++
T Consensus       186 gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnl  262 (448)
T KOG0195|consen  186 GIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNL  262 (448)
T ss_pred             CcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence            345566677788999999999999996  6677788886654433 3446788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-cee-ecCCCCcEEEccCCCeEEe--eeccccC
Q 016991           85 YIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKG-VYH-RDLKPENLLLDSYGNLKVS--DFGLSAL  158 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~g-i~H-rDlkp~NIll~~~~~lkl~--DfGl~~~  158 (379)
                      .++..|++-|+|+..+....  -++..++.+++.++++|+.|||+.. ++- --|....+++|++-+.+|+  |--++. 
T Consensus       263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf-  341 (448)
T KOG0195|consen  263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF-  341 (448)
T ss_pred             eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee-
Confidence            99999999999999997654  3567889999999999999999974 333 3688899999998776664  322221 


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCC--CCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh--cccCCCCCCC
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYD--GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA--AEFSCPFWFS  234 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~--~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~--~~~~~p~~~s  234 (379)
                        +.    ....-+|.|++||.+..++.+  -.++|+||+.+++|||.+.+.||.+-+..+.-.+|.-  ....+|+.+|
T Consensus       342 --qe----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis  415 (448)
T KOG0195|consen  342 --QE----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGIS  415 (448)
T ss_pred             --ec----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCcc
Confidence              11    122347899999999877654  3579999999999999999999999888877777644  4567899999


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHh
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIR  259 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il  259 (379)
                      +..-.|++-|+..||.+||.++.|.
T Consensus       416 ~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  416 RHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHHHHHHHhcCCCCcCCCcceeh
Confidence            9999999999999999999988754

>smart00090 RIO RIO-like kinase

Probab=99.87  E-value=5.7e-22  Score=179.72  Aligned_cols=146  Identities=17%  Similarity=0.226  Sum_probs=116.1

Q ss_pred             CeeeeeeecccCCeEEEEEE-ECCCCcEEEEEEeecccccc---------------------hHHHHHHHHHHHHHHhCC
Q 016991           10 KYEVGRTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILK---------------------HRMVDQIKREISIMKIVR   67 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~-~~~~~~~vaiK~i~~~~~~~---------------------~~~~~~~~~Ei~~l~~l~   67 (379)
                      -|++.+.||+|+||.||+|. +..+|+.||||++.......                     ......+.+|+.+++.+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            48899999999999999999 77789999999997543110                     001234678999999997


Q ss_pred             CCC--cceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-ceeecCCCCcEEEcc
Q 016991           68 HPN--IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG-VYHRDLKPENLLLDS  144 (379)
Q Consensus        68 hp~--Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~g-i~HrDlkp~NIll~~  144 (379)
                      +.+  +.++++.    ...|+||||+.|++|.........+...++..++.||+.+|++||+.| |+||||||+||+++ 
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-  183 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-  183 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence            633  3444432    235899999999888766545556777778899999999999999999 99999999999999 


Q ss_pred             CCCeEEeeeccccCCC
Q 016991          145 YGNLKVSDFGLSALPQ  160 (379)
Q Consensus       145 ~~~lkl~DfGl~~~~~  160 (379)
                      ++.++|+|||.+....
T Consensus       184 ~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CCCEEEEEChhhhccC
Confidence            8899999999876443

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.87  E-value=3e-23  Score=198.48  Aligned_cols=175  Identities=25%  Similarity=0.378  Sum_probs=134.2

Q ss_pred             eEEEEEeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ++|+.|++|.-.+|.+++....   ..+......++.|+..|++|   +|.+|||+||.||+...++.+||.|||+....
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~  406 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ  406 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence            3889999999999999997543   35566788999999999999   99999999999999999999999999998755


Q ss_pred             CCCc------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcccCCCCC
Q 016991          160 QQGV------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEFSCPFW  232 (379)
Q Consensus       160 ~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~  232 (379)
                      ....      .......||..||+||.+.+..|. .++||||||+||+|++. =..+|.   .......+..+.++...+
T Consensus       407 ~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~-~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r~g~ip~~~~  482 (516)
T KOG1033|consen  407 DKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYS-EKVDIYALGLILAELLIQFSTQFE---RIATLTDIRDGIIPPEFL  482 (516)
T ss_pred             ccCCcccchhhhhhhcccccccCCHHHHhhhhhh-hhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhhcCCCChHHh
Confidence            4422      123456799999999999988875 99999999999999997 222221   112223333333321122


Q ss_pred             C-CHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          233 F-STGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       233 ~-s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      . -|+-..|+.+||.+.|..||++.+.--|+|.
T Consensus       483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            2 3455689999999999999987777667664

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=3.7e-21  Score=199.22  Aligned_cols=193  Identities=23%  Similarity=0.330  Sum_probs=156.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~   84 (379)
                      -.+|.|-+.||+|+||+||.|...+ |+.||+|+-.....-.--...      +++.+|+   -+.|+.+.....-.+..
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHHHccCCcc
Confidence            3589999999999999999999987 999999987544321111122      2333444   34566666666667778


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-------CCCeEEeeecccc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-------YGNLKVSDFGLSA  157 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-------~~~lkl~DfGl~~  157 (379)
                      ++|+||.+-|+|.+++...+.+++..+..+..|++..|+.||..+|||+||||+|+||..       +--++|+|||.+.
T Consensus       770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            999999999999999998889999999999999999999999999999999999999942       2359999999875


Q ss_pred             CCCC--CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCC
Q 016991          158 LPQQ--GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYL  208 (379)
Q Consensus       158 ~~~~--~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~  208 (379)
                      -+.-  +.......++|-.+-++|+..++++. +.+|.|.+.-+++.||+|+.
T Consensus       850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWt-Yq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWT-YQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eeeEcCCCcEEeeeeccccchhHHHhcCCCCc-hhhhhHHHHHHHHHHHHHHH
Confidence            3322  22355677899999999999998885 99999999999999999963

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.84  E-value=8.4e-20  Score=162.72  Aligned_cols=137  Identities=23%  Similarity=0.333  Sum_probs=115.3

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccch-----HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH-----RMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +.||+|++|.||+|.+  +|..+++|+.........     .....+.+|+.++..++|++|.....++...+..+++||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   79 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME   79 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence            6799999999999987  678899998654322111     123457889999999999999888777777788999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      |++|++|.+.+.....    ....++.+++.+|.++|+.|++|||++|+|||++ ++.++|+|||.+..
T Consensus        80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            9999999998865332    7889999999999999999999999999999999 78999999998865

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.82  E-value=7.4e-20  Score=161.70  Aligned_cols=140  Identities=19%  Similarity=0.308  Sum_probs=110.1

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch-------------------HHHHHHHHHHHHHHhCCCCC-
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH-------------------RMVDQIKREISIMKIVRHPN-   70 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~-------------------~~~~~~~~Ei~~l~~l~hp~-   70 (379)
                      |.+.+.||+|+||.||++.+. +|+.||||++........                   .......+|+.++..+.|++ 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            888999999999999999885 799999999765321000                   01123678899999998874 


Q ss_pred             -cceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeE
Q 016991           71 -IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLK  149 (379)
Q Consensus        71 -Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lk  149 (379)
                       +...++    ....+++|||++|++|.....      ......++.+++.++.++|+.||+||||||+||+++.++.++
T Consensus        96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~  165 (198)
T cd05144          96 PVPKPID----WNRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY  165 (198)
T ss_pred             CCCceee----cCCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence             444443    245689999999998865432      134667889999999999999999999999999999999999


Q ss_pred             EeeeccccCCCC
Q 016991          150 VSDFGLSALPQQ  161 (379)
Q Consensus       150 l~DfGl~~~~~~  161 (379)
                      |+|||++.....
T Consensus       166 liDfg~~~~~~~  177 (198)
T cd05144         166 IIDWPQMVSTDH  177 (198)
T ss_pred             EEECCccccCCC
Confidence            999999864443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.82  E-value=1.6e-19  Score=159.42  Aligned_cols=134  Identities=19%  Similarity=0.279  Sum_probs=108.9

Q ss_pred             eecccCCeEEEEEEECCCCcEEEEEEeecccccc-----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           16 TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-----HRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~-----~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      .||+|+||.||+|..  +|..+++|+........     .....++.+|+.+++.++|+++....-+....+..+++|||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   78 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY   78 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence            489999999999984  57889999865432211     11235678999999999988766655555666778999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           91 VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        91 ~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ++|++|.+.+.....       .++.|++.+|.+||+.|++|||++|+||+++ ++.++++|||++...
T Consensus        79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            999999887754321       7899999999999999999999999999999 799999999988653

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.80  E-value=2.7e-19  Score=174.18  Aligned_cols=198  Identities=23%  Similarity=0.354  Sum_probs=155.8

Q ss_pred             HHhCCCCCcceEEEEEEeCCeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeecCCCCcE
Q 016991           63 MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGV-YHRDLKPENL  140 (379)
Q Consensus        63 l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi-~HrDlkp~NI  140 (379)
                      |+.+.|.|+.++++.+.+....+.|.+||+.|+|.+.+.. .-+++..-...++++|+.|+.|+|...| +|+.+++.|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            4678999999999999999999999999999999999987 3467777778889999999999998866 9999999999


Q ss_pred             EEccCCCeEEeeeccccCCCC--CcccccccccCCCCCchhhhccCCC------CCCchhHHHHHHHHHHHHhCCCCCCC
Q 016991          141 LLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEVLSNRGY------DGSAADVWSCGVILFVLMAGYLPFGE  212 (379)
Q Consensus       141 ll~~~~~lkl~DfGl~~~~~~--~~~~~~~~~gt~~y~aPE~l~~~~~------~~~~~DiwSlGvil~~ll~g~~Pf~~  212 (379)
                      ++|..+.+||+|||+......  .........-..-|.|||.+.....      .+.++||||+|++++|+++...||+.
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~  160 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDL  160 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcccc
Confidence            999999999999999876532  1111112223456999999976421      24679999999999999999999976


Q ss_pred             CCh----HHHHHHHHh-cccCC-CC-----CCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          213 TDL----PTLYKKINA-AEFSC-PF-----WFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       213 ~~~----~~~~~~i~~-~~~~~-p~-----~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ...    .++...+.. +...+ |.     .+.+++..++..|+..+|..||+++++..
T Consensus       161 ~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  161 RNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             ccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            322    234444444 22111 21     24557899999999999999999998764

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.80  E-value=8.3e-19  Score=177.68  Aligned_cols=139  Identities=18%  Similarity=0.272  Sum_probs=112.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc-----chHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----KHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .|...+.||+|+||+||++....  ..+++|+.......     .....+.+.+|+.+++.++|++++....+.......
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~  411 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLG--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK  411 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecC--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence            44667899999999999998753  34455443221111     112235688999999999999999888777777788


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ++||||++|++|.+.+.        ....++.|++.+|.|||+.|++||||||+|||+ .++.++|+|||++...
T Consensus       412 ~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        412 TIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             EEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            99999999999998875        356789999999999999999999999999999 6789999999998754

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.79  E-value=4.9e-19  Score=154.73  Aligned_cols=141  Identities=23%  Similarity=0.359  Sum_probs=101.5

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHH---------------------HHHHHHHHHhCCCCC-
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---------------------IKREISIMKIVRHPN-   70 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~---------------------~~~Ei~~l~~l~hp~-   70 (379)
                      +++.||+|+||+||.|.+. +|+.||||++.............                     ...|...+..+.+.+ 
T Consensus         1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            3578999999999999987 89999999987543221111111                     145666666665443 


Q ss_pred             -cceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCe
Q 016991           71 -IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNL  148 (379)
Q Consensus        71 -Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~l  148 (379)
                       +.+.++.    ...+++|||++|+.+........... ..++.++.+++.++.++|+ .||+||||||+||+++ ++.+
T Consensus        80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~  153 (187)
T cd05119          80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV  153 (187)
T ss_pred             CCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence             4445543    23589999999854322111111111 6788999999999999999 9999999999999999 8999


Q ss_pred             EEeeeccccCCC
Q 016991          149 KVSDFGLSALPQ  160 (379)
Q Consensus       149 kl~DfGl~~~~~  160 (379)
                      +|+|||.+....
T Consensus       154 ~liDfg~a~~~~  165 (187)
T cd05119         154 YIIDVPQAVEID  165 (187)
T ss_pred             EEEECccccccc
Confidence            999999986443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.74  E-value=4.2e-17  Score=148.10  Aligned_cols=137  Identities=23%  Similarity=0.338  Sum_probs=104.4

Q ss_pred             eeec-ccCCeEEEEEEECCCCcEEEEEEeecccc----c------chHHHHHHHHHHHHHHhCCCCCc--ceEEEEEEeC
Q 016991           15 RTIG-EGTFAKVRFAQNRETGESVAMKVLAKSTI----L------KHRMVDQIKREISIMKIVRHPNI--VRLHEVLASR   81 (379)
Q Consensus        15 ~~LG-~G~~g~V~~a~~~~~~~~vaiK~i~~~~~----~------~~~~~~~~~~Ei~~l~~l~hp~I--v~l~~~~~~~   81 (379)
                      ..|| .|+.|+||.+...  +..+++|.+....+    .      .......+.+|+.++..++|++|  ++.+++....
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            4576 7888888887764  78899998854321    0      11223568899999999998875  6677664332


Q ss_pred             -Ce---EEEEEeccCC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           82 -TK---VYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        82 -~~---~~lv~E~~~g-g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                       ..   .++|||+++| .+|.+++.. ..+++..    +.||+.+|.+||+.||+||||||+|||++.++.++|+|||.+
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~  189 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG  189 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence             22   3599999997 688877754 4566543    578999999999999999999999999999999999999987


Q ss_pred             cC
Q 016991          157 AL  158 (379)
Q Consensus       157 ~~  158 (379)
                      ..
T Consensus       190 ~~  191 (239)
T PRK01723        190 EL  191 (239)
T ss_pred             cc
Confidence            64

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.74  E-value=5.3e-19  Score=180.55  Aligned_cols=261  Identities=27%  Similarity=0.451  Sum_probs=213.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      .....+.+.+-+-.|+++.++.+.-..+|...++|+..+.........+.+..+-.++-..++|-++...--+......+
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~  880 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP  880 (1205)
T ss_pred             CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence            45678889999999999999999988888878887765543333323344455555555556677776666666778899


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc-CCCC---
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQ---  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~-~~~~---  161 (379)
                      ++++|..|++|...+.+.+..+++.++.++..+..+++|||+..+.|||++|.|++...+|+.+++|||... ....   
T Consensus       881 L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~  960 (1205)
T KOG0606|consen  881 LVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT  960 (1205)
T ss_pred             hhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence            999999999999999988889999999999999999999999999999999999999999999999998321 1000   


Q ss_pred             -C-----------------------c---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 016991          162 -G-----------------------V---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD  214 (379)
Q Consensus       162 -~-----------------------~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~  214 (379)
                       +                       .   ..-....||+.|.+||.+.+... +..+|+|+.|+++++.++|.+||....
T Consensus       961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~h-gs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen  961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRH-GSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred             CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccC-CCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence             0                       0   00123468999999999988765 589999999999999999999999999


Q ss_pred             hHHHHHHHHhcccCCCC---CCCHhHHHHHHHccCCCCCCCCChH---hHhcCcccccc
Q 016991          215 LPTLYKKINAAEFSCPF---WFSTGATSLIHKILDPNPKTRIRIE---GIRKHPWFRKN  267 (379)
Q Consensus       215 ~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~s~~---~il~hp~f~~~  267 (379)
                      .....+.|.....+.|.   ..+.++++++..+|..+|.+|..+.   +...||||+..
T Consensus      1040 pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred             hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence            99999999888877664   4799999999999999999999987   99999999864

>PF03822 NAF: NAF domain; InterPro: IPR004041 The NAF domain is a 24 amino acid domain that is found in a plant-specific subgroup of serine-threonine protein kinases (CIPKs), that interact with calcineurin B-like calcium sensor proteins (CBLs)

Probab=99.73  E-value=2.4e-18  Score=119.39  Aligned_cols=61  Identities=41%  Similarity=0.795  Sum_probs=49.4

Q ss_pred             CccccccceeccCcCCCchhhhhhhhh-ccccccceeecCCHHHHHHHHHHHHHhCCcEEEE
Q 016991          307 PLLMNAFEMITLSQGLNLAALFDRRQD-YVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHT  367 (379)
Q Consensus       307 ~~~~~~~~~~~~s~~~~~~~l~~~~~~-~~~~~~rf~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (379)
                      |..+|||++|++|+|+|||+||+..+. .+++++||+|+.||++|+++||++|+++||.|+|
T Consensus         2 p~~lNAFdiIS~S~G~DLSgLFe~~~~~~~~~~~RF~S~~~~~~Ii~klEe~a~~~~~~V~K   63 (63)
T PF03822_consen    2 PKSLNAFDIISLSSGFDLSGLFEEKDKSSVKRETRFTSKEPASEIIEKLEEIAKKLGFRVKK   63 (63)
T ss_dssp             -EE--HHHHHCTSTTTSCGGGGGCG-S-SS---EEEEESS-HHHHHHHHHHHHHHTTEEEEE
T ss_pred             CccccHHHHHHhccCCChHHhcCccccccccccceEecCCCHHHHHHHHHHHHHhcCceeeC
Confidence            678999999999999999999987654 2578999999999999999999999999999986

Whereas the N-terminal part of CIPKs comprises a conserved catalytic domain typical of Ser-Thr kinases, the much less conserved C-terminal domain appears to be unique to this subgroup of kinases. The only exception is the NAF domain that forms an 'island of conservation' in this otherwise variable region. The NAF domain has been named after the prominent conserved amino acids Asn-Ala-Phe. It represents a minimum protein interaction module that is both necessary and sufficient to mediate the interaction with the CBL calcium sensor proteins []. The secondary structure of the NAF domain is currently not known, but secondary structure computation of the C-terminal region of Arabidopsis thaliana CBL-interacting protein kinase 1 revealed a long helical structure [].; GO: 0007165 signal transduction; PDB: 2ZFD_B 2EHB_D.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.71  E-value=8.2e-17  Score=134.43  Aligned_cols=132  Identities=20%  Similarity=0.306  Sum_probs=112.6

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeEEEEEec
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH--PNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h--p~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      +++.||.|.++.||++....  ..+++|.......     ...+.+|+.+++.++|  .++.+++......+..+++|||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~   74 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW   74 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence            46789999999999999853  7899998865432     3568899999999986  5899999988888899999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           91 VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK---GVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        91 ~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~---gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      ++|+.+...       +......++.+++.++.++|..   +++|+|++|+||+++..+.++++|||.+..
T Consensus        75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            998877543       5566778899999999999985   799999999999999989999999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.66  E-value=7e-17  Score=157.57  Aligned_cols=252  Identities=21%  Similarity=0.220  Sum_probs=191.9

Q ss_pred             cCeeeeeeecc--cCCeEEEEEEE--CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 016991            9 AKYEVGRTIGE--GTFAKVRFAQN--RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTK   83 (379)
Q Consensus         9 ~~y~~~~~LG~--G~~g~V~~a~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~   83 (379)
                      ..+-+.+.+|.  |.+|.||.+..  ..++..+|+|.-..... .......=.+|+.-.+.++ |++.++.+..+...+.
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~  192 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI  192 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC-CccccccccchhhcccccCccccccccCcccccCCc
Confidence            45667788999  99999999998  89999999997443221 1111223345666666665 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHHCCceeecCCCCcEEEccC-CCeEEeeecccc
Q 016991           84 VYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLID----AVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSA  157 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~-l~e~~~~~~~~qil~----~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~  157 (379)
                      .|+-+|+| |.+|..+...-.. +++..++..+.+...    ||..+|+.+++|-|+||+||+...+ ...+++|||+..
T Consensus       193 lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  193 LFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             ceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeE
Confidence            99999999 5778777765544 899999999999999    9999999999999999999999999 789999999887


Q ss_pred             CCCCCccc-----ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCC-C--CChHHHHHHHHhcccCC
Q 016991          158 LPQQGVEL-----LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFG-E--TDLPTLYKKINAAEFSC  229 (379)
Q Consensus       158 ~~~~~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~-~--~~~~~~~~~i~~~~~~~  229 (379)
                      ....+.-.     ....-|...|++||.+.+.  .+...||+++|.++.+-..|..++. +  ..+....+.....  .+
T Consensus       272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l--~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~--e~  347 (524)
T KOG0601|consen  272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGL--ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL--EF  347 (524)
T ss_pred             EccCCccccceeeeecCCCCceEeChhhhccc--cchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch--hh
Confidence            55443211     1222578899999998653  4689999999999998887765543 3  2332222111111  11


Q ss_pred             CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      -...+.++...+..|++.+|..|+++..++.|+++..
T Consensus       348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            1224667777999999999999999999999998763

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.64  E-value=4.3e-16  Score=155.39  Aligned_cols=147  Identities=20%  Similarity=0.396  Sum_probs=102.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc--------------------------c-h----HHHHH
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL--------------------------K-H----RMVDQ   55 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~--------------------------~-~----~~~~~   55 (379)
                      .+..|+. +.||.|++|.||.|+.+.+|+.||||+++..-..                          + .    +..+.
T Consensus       118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~  196 (537)
T PRK04750        118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT  196 (537)
T ss_pred             HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence            3556777 7899999999999999988999999999753100                          0 0    12223


Q ss_pred             HHHHHH------HHHhC----CCCCcceEEEEEEe-CCeEEEEEeccCCCChHHH--HHhcC----CCCHHHHHHHHHHH
Q 016991           56 IKREIS------IMKIV----RHPNIVRLHEVLAS-RTKVYIILEFVTGGELFDK--IVHQG----RLLENDCRRYFQQL  118 (379)
Q Consensus        56 ~~~Ei~------~l~~l----~hp~Iv~l~~~~~~-~~~~~lv~E~~~gg~L~~~--l~~~~----~l~e~~~~~~~~qi  118 (379)
                      +.+|++      .+.++    .+...+.+-.++.+ .+..++||||++|+.+.+.  +...+    .+.+..+..++.|+
T Consensus       197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            333333      33333    24444444444432 4567899999999999764  33333    24555566666666


Q ss_pred             HHHHHHHHHCCceeecCCCCcEEEccCC----CeEEeeeccccCCCC
Q 016991          119 IDAVAHCHSKGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQ  161 (379)
Q Consensus       119 l~~l~ylH~~gi~HrDlkp~NIll~~~~----~lkl~DfGl~~~~~~  161 (379)
                      +       ..|++|+|+||.||+++.+|    .++++|||++.....
T Consensus       277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            5       58999999999999999888    999999999875544

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.61  E-value=9.8e-15  Score=143.74  Aligned_cols=143  Identities=21%  Similarity=0.307  Sum_probs=97.4

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccc---------------------------hH----HHH------HHH
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK---------------------------HR----MVD------QIK   57 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~---------------------------~~----~~~------~~~   57 (379)
                      +.||.|++|.||+|+.. +|+.||||+.+..-...                           ..    ...      .+.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            67999999999999975 79999999985421000                           00    001      133


Q ss_pred             HHHHHHHhC----CCCCcceEEEEE-EeCCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHHCCc
Q 016991           58 REISIMKIV----RHPNIVRLHEVL-ASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLID-AVAHCHSKGV  130 (379)
Q Consensus        58 ~Ei~~l~~l----~hp~Iv~l~~~~-~~~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~-~l~ylH~~gi  130 (379)
                      +|...+.++    +|.+-+.+-.++ ...+..++||||++|++|.+..... ...+   ...++.+++. .+..+|..|+
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~  278 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF  278 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence            455555444    233223332333 2344578999999999998776432 1222   3345556655 4678999999


Q ss_pred             eeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991          131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus       131 ~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +|+|+||.||+++.+|.++++|||++.....
T Consensus       279 ~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       279 FHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             eeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            9999999999999999999999999876543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.58  E-value=5.3e-14  Score=138.94  Aligned_cols=191  Identities=17%  Similarity=0.254  Sum_probs=141.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....--|++ ...+-++.+..-.|..+.++.+|.|.+.+...-   .....+++-++-|+.++||||+++++.+...+.+
T Consensus         9 ~~~~fpY~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~   84 (690)
T KOG1243|consen    9 SSSQFPYDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTL   84 (690)
T ss_pred             ccccCCccc-ccccCCCcccccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCce
Confidence            344445666 333333333322466677899999998866542   3456788889999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH-SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH-~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+|+|.+.  .|..++...+   ......-+.||+.||.||| +.+++|++|.-..|+++..|..||++|.++.......
T Consensus        85 ylvTErV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~  159 (690)
T KOG1243|consen   85 YLVTERVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFN  159 (690)
T ss_pred             EEEeeccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCC
Confidence            99999874  4555665533   6667778899999999998 6689999999999999999999999999875443322


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCC
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY  207 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~  207 (379)
                      .......---.|..|+.+....   -..|.|.|||++++++.|.
T Consensus       160 ~~~~~~~~~~s~~~P~~~~~s~---~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  160 APAKSLYLIESFDDPEEIDPSE---WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             cccccchhhhcccChhhcCccc---cchhhhhHHHHHHHHhCcc
Confidence            1112222223467777653222   3579999999999999993

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.57  E-value=6.3e-16  Score=140.34  Aligned_cols=201  Identities=16%  Similarity=0.274  Sum_probs=143.7

Q ss_pred             HHHHHhCCCCCcceEEEEEEeC-----CeEEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC--
Q 016991           60 ISIMKIVRHPNIVRLHEVLASR-----TKVYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSK--  128 (379)
Q Consensus        60 i~~l~~l~hp~Iv~l~~~~~~~-----~~~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~--  128 (379)
                      ...|-.+-|.|||+++.+|.+.     ....++.||++.|++..++++.    ..+......+|+.||+.||.|||+.  
T Consensus       118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~P  197 (458)
T KOG1266|consen  118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCC
Confidence            4455666799999999998643     4588999999999999999753    4688889999999999999999987  


Q ss_pred             CceeecCCCCcEEEccCCCeEEeeeccccCCCC----CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHH
Q 016991          129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ----GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM  204 (379)
Q Consensus       129 gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll  204 (379)
                      -|+|+++...-|++..+|-+|+.--........    .........|-++|.|||.=.... .+.++|||++|+...+|.
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn-~~~a~dIy~fgmcAlema  276 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTN-TTGASDIYKFGMCALEMA  276 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccc-cccchhhhhhhHHHHHHH
Confidence            599999999999999999888842211111000    001112234678899998643322 246899999999999998


Q ss_pred             hCCCC-CCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          205 AGYLP-FGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       205 ~g~~P-f~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      .|..- -.+.+.......|...-+...   .+.-++++.+||+..|..||++.+++.||-.
T Consensus       277 ilEiq~tnseS~~~~ee~ia~~i~~le---n~lqr~~i~kcl~~eP~~rp~ar~llfHpll  334 (458)
T KOG1266|consen  277 ILEIQSTNSESKVEVEENIANVIIGLE---NGLQRGSITKCLEGEPNGRPDARLLLFHPLL  334 (458)
T ss_pred             HheeccCCCcceeehhhhhhhheeecc---CccccCcCcccccCCCCCCcchhhhhcCcee
Confidence            88643 333332222222322222111   1223578999999999999999999999974

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.55  E-value=3.8e-15  Score=145.52  Aligned_cols=252  Identities=21%  Similarity=0.185  Sum_probs=191.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...++|..+..||.|.|+.|+..... .++..|++|.+.+........+. -..|+-+...+ .|.+++.++..|.....
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~~~r~  340 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIF-SLGEVILEAILGSHLPSVGKNSSWSQLRQ  340 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhc-chhhhhHhhHhhcccccCCCCCCcccccc
Confidence            45678999999999999999987765 67889999988665444332222 23455555555 49999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~~~~~~  162 (379)
                      .|+-.|||+++++...+.-...+.+...++...|++.++.++|+..++|+|+||+||++..+ +..++.|||........
T Consensus       341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~  420 (524)
T KOG0601|consen  341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS  420 (524)
T ss_pred             ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee
Confidence            99999999999987777555678888999999999999999999999999999999999886 78899999987642221


Q ss_pred             cccccccccCCCCC-chhhhccCCCCCCchhHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHhcccCCCCCCCHhHHHH
Q 016991          163 VELLHTTCGTPNYV-APEVLSNRGYDGSAADVWSCGVILFVLMAGYL-PFGETDLPTLYKKINAAEFSCPFWFSTGATSL  240 (379)
Q Consensus       163 ~~~~~~~~gt~~y~-aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~-Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  240 (379)
                      ..   ...+.-.+. .+|++.....+..++|++|||.-+.+..+|.. ++.+..    ...|..+........+.++..+
T Consensus       421 ~~---~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~----~~~i~~~~~p~~~~~~~~~q~~  493 (524)
T KOG0601|consen  421 SG---VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ----SLTIRSGDTPNLPGLKLQLQVL  493 (524)
T ss_pred             cc---cccccccccccchhhccccccccccccccccccccccccCcccCccccc----ceeeecccccCCCchHHhhhhh
Confidence            11   111222333 35666555555699999999999999988863 332222    2334555555555566888999


Q ss_pred             HHHccCCCCCCCCChHhHhcCcccc
Q 016991          241 IHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      .+.++.+++..|+.+.++..|+-|.
T Consensus       494 ~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  494 LKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             hhhhcCCccccchhhhhhcccchhh
Confidence            9999999999999999998887664

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.54  E-value=1.5e-13  Score=120.08  Aligned_cols=142  Identities=16%  Similarity=0.222  Sum_probs=104.4

Q ss_pred             eeeecccCCeEEEEEEECC------CCcEEEEEEeeccc---------------cc----chHHHH----HHHHHHHHHH
Q 016991           14 GRTIGEGTFAKVRFAQNRE------TGESVAMKVLAKST---------------IL----KHRMVD----QIKREISIMK   64 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~------~~~~vaiK~i~~~~---------------~~----~~~~~~----~~~~Ei~~l~   64 (379)
                      ...||.|.-+.||.|....      .+..+|||+.+-..               +.    +....+    ..++|+..|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            4679999999999998754      35799999974211               00    011122    2448999999


Q ss_pred             hCCC--CCcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCceeecCCCCcEE
Q 016991           65 IVRH--PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC-HSKGVYHRDLKPENLL  141 (379)
Q Consensus        65 ~l~h--p~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~yl-H~~gi~HrDlkp~NIl  141 (379)
                      ++..  -++.+++++    ..-++||||+.+..+.....++..+++.++..++.|++.++..+ |+.||+|+||+|.||+
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL  157 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML  157 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            8864  456666654    45689999997654433233334566677788899999999999 8999999999999999


Q ss_pred             EccCCCeEEeeeccccCCC
Q 016991          142 LDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus       142 l~~~~~lkl~DfGl~~~~~  160 (379)
                      ++ ++.+.|+|||.+....
T Consensus       158 ~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         158 WH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             EE-CCcEEEEECCCceeCC
Confidence            97 4789999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.49  E-value=1.9e-13  Score=117.23  Aligned_cols=127  Identities=20%  Similarity=0.272  Sum_probs=96.1

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEEeccC
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~lv~E~~~   92 (379)
                      ++.|+.|.++.||++...  +..|++|+......    ......+|+.+++.+.+.++ .+++....  +..++||||++
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence            467899999999999875  78899998754321    11245788999988865554 44554433  33579999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-----eeecCCCCcEEEccCCCeEEeeecccc
Q 016991           93 GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV-----YHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        93 gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi-----~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      |.++.+.        ......++.+++.+|..||+.++     +|+|++|.||+++ ++.++++|||.+.
T Consensus        75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            9887542        11123467899999999999985     9999999999999 6789999999865

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.36  E-value=1.7e-11  Score=104.10  Aligned_cols=136  Identities=19%  Similarity=0.261  Sum_probs=100.5

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchH-----HHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR-----MVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~-----~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      ..+++|+-+.+|.+...  |.++++|.=.+......+     ..++-.+|..++..++--.|....=+..+.+...++||
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            45789999999999664  555666653222222222     22346788999988876666555555566677789999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      |++|..|.+.+...       ...+++.+=.-+.-||..||+|+||.++||++...+ +.++|||++.+..
T Consensus        80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~  142 (204)
T COG3642          80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD  142 (204)
T ss_pred             EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence            99998888888764       245666777778889999999999999999998744 9999999987544

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.30  E-value=1.9e-11  Score=109.24  Aligned_cols=140  Identities=19%  Similarity=0.326  Sum_probs=105.5

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC--CcceEEEEEEeC---CeEEEEEe
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP--NIVRLHEVLASR---TKVYIILE   89 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp--~Iv~l~~~~~~~---~~~~lv~E   89 (379)
                      +.||.|..+.||++...+ |..+++|+.......  .....+.+|..+++.+++.  .+.+++.+....   +..+++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            678999999999998753 689999987654321  1235688999999999763  457777776654   36789999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS------------------------------------------  127 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~------------------------------------------  127 (379)
                      |++|.++.+.+.. ..+++.+...++.+++.+|..||+                                          
T Consensus        81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9999887665432 346666666777777777777773                                          


Q ss_pred             --------------CCceeecCCCCcEEEcc--CCCeEEeeeccccC
Q 016991          128 --------------KGVYHRDLKPENLLLDS--YGNLKVSDFGLSAL  158 (379)
Q Consensus       128 --------------~gi~HrDlkp~NIll~~--~~~lkl~DfGl~~~  158 (379)
                                    ..++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                          24699999999999998  56689999997754

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.26  E-value=2.2e-10  Score=110.47  Aligned_cols=211  Identities=18%  Similarity=0.229  Sum_probs=156.3

Q ss_pred             CeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE----eCCeEEEEEeccCC-CCh
Q 016991           22 FAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA----SRTKVYIILEFVTG-GEL   96 (379)
Q Consensus        22 ~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~----~~~~~~lv~E~~~g-g~L   96 (379)
                      ..+.|++....+|..|++|.++..+....   ...-.-++.++++.|+|||++.+++.    .+..+.+|++|.++ ++|
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL  365 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL  365 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence            45789999999999999999954432222   12234577889999999999999986    45679999999875 567


Q ss_pred             HHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           97 FDKIVH---------------QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        97 ~~~l~~---------------~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      .++-..               ..+.+|..+|.|+.||..||.++|+.|+.-+-|.|.+||++.+.+++|+.-|...+...
T Consensus       366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~  445 (655)
T KOG3741|consen  366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE  445 (655)
T ss_pred             HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence            665432               23578899999999999999999999999999999999999988999987776655443


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCC-CCCCChHHH-HHHHHhcccCCCCCCCHhHHH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLP-FGETDLPTL-YKKINAAEFSCPFWFSTGATS  239 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~P-f~~~~~~~~-~~~i~~~~~~~p~~~s~~~~~  239 (379)
                      +.            .  |-+..    -.+-|.=.||.+++.|.+|..- +........ ...|.       ...|.++++
T Consensus       446 d~------------~--~~le~----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-------~~yS~D~rn  500 (655)
T KOG3741|consen  446 DP------------T--EPLES----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-------TTYSTDLRN  500 (655)
T ss_pred             CC------------C--cchhH----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-------hhhhHHHHH
Confidence            32            0  11211    1467899999999999999543 222222222 22222       236899999


Q ss_pred             HHHHccCCCCCCCCChHhHhcC
Q 016991          240 LIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +|.-+...+++. -++.+++.+
T Consensus       501 ~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  501 VVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HHHHHHhcCccc-ccHHHHHHH
Confidence            999999998886 788888765

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.23  E-value=2.5e-10  Score=96.72  Aligned_cols=145  Identities=22%  Similarity=0.263  Sum_probs=107.7

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch-----HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH-----RMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ....|-+|+-+.|+.+...  |+...||.=.......+     -...+.++|+++|.++.--.|.-..=++.+...-.++
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~   88 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY   88 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence            5678899999999998774  88888875322221111     1234578899999988766666555566666677899


Q ss_pred             EeccCC-CChHHHHHhcC-CCCHHHH-HHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccCC
Q 016991           88 LEFVTG-GELFDKIVHQG-RLLENDC-RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALP  159 (379)
Q Consensus        88 ~E~~~g-g~L~~~l~~~~-~l~e~~~-~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~~  159 (379)
                      |||++| .++.+++.... .-.++.. ..++++|=..+.-||..+|+|+||..+||++..+|   .+.++|||++...
T Consensus        89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            999987 46777775532 2333333 78889999999999999999999999999997655   3589999998654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.13  E-value=2.2e-11  Score=121.01  Aligned_cols=151  Identities=22%  Similarity=0.359  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc---------cccccccCCCCCchhhhccCCC
Q 016991          117 QLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE---------LLHTTCGTPNYVAPEVLSNRGY  186 (379)
Q Consensus       117 qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~---------~~~~~~gt~~y~aPE~l~~~~~  186 (379)
                      +...|+.|+|.. +++|++|.|++|.++.+|..||+.|+++.....+..         ......-...|.|||++.. ..
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~  185 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TT  185 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-cc
Confidence            344899999965 899999999999999999999999998764433111         1111224567999999977 44


Q ss_pred             CCCchhHHHHHHHHHHHH-hCCCCCCCCChHHHHHH----HHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          187 DGSAADVWSCGVILFVLM-AGYLPFGETDLPTLYKK----INAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       187 ~~~~~DiwSlGvil~~ll-~g~~Pf~~~~~~~~~~~----i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+.++|++|+||++|.+. .|+..+...+....+..    .....+..+..+++++++=|.++|..++..||++..++..
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~  265 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSI  265 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcc
Confidence            568999999999999999 56666655443322221    1222334556789999999999999999999999999999


Q ss_pred             ccccccC
Q 016991          262 PWFRKNY  268 (379)
Q Consensus       262 p~f~~~~  268 (379)
                      |||....
T Consensus       266 ~ff~D~~  272 (700)
T KOG2137|consen  266 PFFSDPG  272 (700)
T ss_pred             cccCCch
Confidence            9998643

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.11  E-value=2.3e-09  Score=98.70  Aligned_cols=132  Identities=17%  Similarity=0.088  Sum_probs=92.8

Q ss_pred             EEEEEEECCCCcEEEEEEeecccccc---h-----HHHHHHHHHHHHHHhCCCCCc--ceEEEEEEe-----CCeEEEEE
Q 016991           24 KVRFAQNRETGESVAMKVLAKSTILK---H-----RMVDQIKREISIMKIVRHPNI--VRLHEVLAS-----RTKVYIIL   88 (379)
Q Consensus        24 ~V~~a~~~~~~~~vaiK~i~~~~~~~---~-----~~~~~~~~Ei~~l~~l~hp~I--v~l~~~~~~-----~~~~~lv~   88 (379)
                      .|+....  .|+.|.||.........   .     .-...+.+|+..+..+..-+|  ..++.+...     ...-++|+
T Consensus        37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt  114 (268)
T PRK15123         37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT  114 (268)
T ss_pred             eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence            3555544  47789999663322110   0     001136789988887753333  333444432     23578999


Q ss_pred             eccCCC-ChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-------CCCeEEeeecccc
Q 016991           89 EFVTGG-ELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-------YGNLKVSDFGLSA  157 (379)
Q Consensus        89 E~~~gg-~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-------~~~lkl~DfGl~~  157 (379)
                      |++++. +|.+++..  ....++.....++.++...+.-||+.||+|+|+++.|||++.       ++.+.++||+.+.
T Consensus       115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            999886 78888753  345667778899999999999999999999999999999985       4579999999875

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.09  E-value=7.9e-10  Score=96.25  Aligned_cols=128  Identities=20%  Similarity=0.333  Sum_probs=84.0

Q ss_pred             EEEEEEECCCCcEEEEEEeeccc----------------------c-cchHHHHHHHHHHHHHHhCCCC--CcceEEEEE
Q 016991           24 KVRFAQNRETGESVAMKVLAKST----------------------I-LKHRMVDQIKREISIMKIVRHP--NIVRLHEVL   78 (379)
Q Consensus        24 ~V~~a~~~~~~~~vaiK~i~~~~----------------------~-~~~~~~~~~~~Ei~~l~~l~hp--~Iv~l~~~~   78 (379)
                      .||.|... +|..+|+|+.....                      . .........++|.+.|..+..-  ++.+++++.
T Consensus         1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            48999884 57899999974311                      0 0111234578999999999866  456666542


Q ss_pred             EeCCeEEEEEeccC--CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           79 ASRTKVYIILEFVT--GGELFDKIVHQGRLLENDCRRYFQQLIDAVAH-CHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        79 ~~~~~~~lv~E~~~--gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~y-lH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                          .-++||||+.  |..+.. +.. ..++......++.+++..+.. +|+.||+|+||.+.||+++++ .+.++|||.
T Consensus        80 ----~~~ivME~I~~~G~~~~~-l~~-~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q  152 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPR-LKD-VDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ  152 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGC-HHH-CGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred             ----CCEEEEEecCCCccchhh-HHh-ccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence                2469999998  544433 332 222245567788888886555 579999999999999999986 999999998


Q ss_pred             ccCC
Q 016991          156 SALP  159 (379)
Q Consensus       156 ~~~~  159 (379)
                      +...
T Consensus       153 av~~  156 (188)
T PF01163_consen  153 AVDS  156 (188)
T ss_dssp             EEET
T ss_pred             ceec
Confidence            7543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=99.05  E-value=6.7e-09  Score=98.19  Aligned_cols=236  Identities=17%  Similarity=0.228  Sum_probs=150.2

Q ss_pred             eeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEE----E--EeC-Ce
Q 016991           12 EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEV----L--ASR-TK   83 (379)
Q Consensus        12 ~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~----~--~~~-~~   83 (379)
                      ..++.||+|+-+.+|-.-..  +..|| |+.........   .+   -...|... .||-+..-+.+    .  .+. ..
T Consensus        14 ~~gr~LgqGgea~ly~l~e~--~d~VA-KIYh~Pppa~~---aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~   84 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV--RDQVA-KIYHAPPPAAQ---AQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRGKV   84 (637)
T ss_pred             CCCccccCCccceeeecchh--hchhh-eeecCCCchHH---HH---HHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence            35688999999999965432  33444 88876543221   11   12222222 45543321111    0  122 23


Q ss_pred             EEEEEeccCCCChHHHHHh----c---CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           84 VYIILEFVTGGELFDKIVH----Q---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~----~---~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      +-+.|..++|..--..+.+    .   ....++-+.+..+.|+.+...||..|..-+|+.++|+|+.+++.+.|.|-..-
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf  164 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF  164 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence            7788888877543222221    1   13456778889999999999999999999999999999999999999875533


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCC----CCCchhHHHHHHHHHHHHhC-CCCCCCCC-----hHHHHHHHHhcc
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGY----DGSAADVWSCGVILFVLMAG-YLPFGETD-----LPTLYKKINAAE  226 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~----~~~~~DiwSlGvil~~ll~g-~~Pf~~~~-----~~~~~~~i~~~~  226 (379)
                      .... ........+|.+.|.+||.-.-..+    -+...|-|.|||+++++|.| +.||.+-.     ....-..|..+.
T Consensus       165 qi~~-ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~  243 (637)
T COG4248         165 QINA-NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR  243 (637)
T ss_pred             eecc-CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence            2222 2234456789999999997542211    14679999999999999985 99996521     111111222221


Q ss_pred             c-----------CCC---CC--CCHhHHHHHHHccCC--CCCCCCChHh
Q 016991          227 F-----------SCP---FW--FSTGATSLIHKILDP--NPKTRIRIEG  257 (379)
Q Consensus       227 ~-----------~~p---~~--~s~~~~~li~~~L~~--dP~~R~s~~~  257 (379)
                      +           +.|   +|  +++++..|..+|+..  ++.-|||++-
T Consensus       244 f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         244 FAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             eeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence            1           111   11  688899999999874  3668999854

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.98  E-value=6.3e-09  Score=93.63  Aligned_cols=138  Identities=20%  Similarity=0.293  Sum_probs=103.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc-----------------cc--hHHHHHHHHHHHHHHhCCCC--
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-----------------LK--HRMVDQIKREISIMKIVRHP--   69 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~-----------------~~--~~~~~~~~~Ei~~l~~l~hp--   69 (379)
                      +.++..||.|.-|.||.|.+. .|.++|||.-+....                 ..  .-.....++|..+|..|...  
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            457789999999999999987 689999997532100                 00  00123467899999998755  


Q ss_pred             CcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeE
Q 016991           70 NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLK  149 (379)
Q Consensus        70 ~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lk  149 (379)
                      .+.+.+++    +.-.+||||++|-.|..     -+++......++..|+.-+.-+-..||+|+|+.+-||+++++|.+.
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~-----~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~  242 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYR-----LRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV  242 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeec-----ccCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence            66666653    44679999999977753     2234556667777777777777799999999999999999999999


Q ss_pred             EeeeccccC
Q 016991          150 VSDFGLSAL  158 (379)
Q Consensus       150 l~DfGl~~~  158 (379)
                      ++||-.+..
T Consensus       243 vIDwPQ~v~  251 (304)
T COG0478         243 VIDWPQAVP  251 (304)
T ss_pred             EEeCccccc
Confidence            999976543

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.92  E-value=1.1e-08  Score=90.83  Aligned_cols=105  Identities=25%  Similarity=0.380  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHhCCCCC--cceEEEEEEeC----CeEEEEEeccCCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 016991           54 DQIKREISIMKIVRHPN--IVRLHEVLASR----TKVYIILEFVTGG-ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH  126 (379)
Q Consensus        54 ~~~~~Ei~~l~~l~hp~--Iv~l~~~~~~~----~~~~lv~E~~~gg-~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH  126 (379)
                      ....+|...+..+..-+  +.+.+.+....    ...++|+|+++|. +|.+++......+......++.++...+.-||
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence            45778888887775433  34455554432    2468999999884 78888877555777888899999999999999


Q ss_pred             HCCceeecCCCCcEEEccCC---CeEEeeeccccC
Q 016991          127 SKGVYHRDLKPENLLLDSYG---NLKVSDFGLSAL  158 (379)
Q Consensus       127 ~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~  158 (379)
                      +.||+|+|++|.|||++.++   .+.++||+-+..
T Consensus       136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            99999999999999999887   899999997654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.77  E-value=1.2e-07  Score=83.68  Aligned_cols=140  Identities=17%  Similarity=0.239  Sum_probs=90.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHH------HHHHHHHHHhCCCC---CcceEEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ------IKREISIMKIVRHP---NIVRLHEV   77 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~------~~~Ei~~l~~l~hp---~Iv~l~~~   77 (379)
                      .-++|.+.+.+-......|.+..-  +|..+++|.........++....      ..+++..+..++..   ....++-+
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            346788888888877777766654  47899999876543222222111      23444444444322   22222222


Q ss_pred             E-----EeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           78 L-----ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        78 ~-----~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      .     .-....+++|||++|.+|.+...    +++    .+...|..++.-+|+.|++|+|..|.|++++.+ .+++.|
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID  177 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIID  177 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEE
Confidence            2     12244568999999988865431    333    244667788999999999999999999999864 499999


Q ss_pred             ecccc
Q 016991          153 FGLSA  157 (379)
Q Consensus       153 fGl~~  157 (379)
                      |+...
T Consensus       178 ~~~k~  182 (229)
T PF06176_consen  178 TQGKR  182 (229)
T ss_pred             Ccccc
Confidence            98654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=98.75  E-value=1.9e-07  Score=82.10  Aligned_cols=138  Identities=13%  Similarity=0.127  Sum_probs=98.2

Q ss_pred             cccCCeEEEEEEECCCCcEEEEEEeecccccc---hHHHHHHHHHHHHHHhCCCCC--cceEEEEEE--e--CCeEEEEE
Q 016991           18 GEGTFAKVRFAQNRETGESVAMKVLAKSTILK---HRMVDQIKREISIMKIVRHPN--IVRLHEVLA--S--RTKVYIIL   88 (379)
Q Consensus        18 G~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~~~~--~--~~~~~lv~   88 (379)
                      |+|+-|.|+.....  |..+-+|.........   ..-...+.+|+..+..+..-+  +.++...-.  .  .-.-+||+
T Consensus        27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            56888889887654  4478888764211100   112356889999998886432  344432111  1  22477999


Q ss_pred             eccCC-CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC--eEEeeecccc
Q 016991           89 EFVTG-GELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN--LKVSDFGLSA  157 (379)
Q Consensus        89 E~~~g-g~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~--lkl~DfGl~~  157 (379)
                      |-+.| -+|.+++...  .+.++.....++.++...+.-||+.|+.|+|+-+.||+++.+|.  ++++||.-++
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            97754 5677777553  34577777899999999999999999999999999999987777  9999998654

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.68  E-value=3.2e-07  Score=81.97  Aligned_cols=141  Identities=18%  Similarity=0.214  Sum_probs=98.0

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccch---------------------HHHHHHHHHHHHHHhCC--CCCc
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---------------------RMVDQIKREISIMKIVR--HPNI   71 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---------------------~~~~~~~~Ei~~l~~l~--hp~I   71 (379)
                      ..|+.|.-+.||+|.. .++..+|+|+.......-.                     .......+|+..|+++.  +-.+
T Consensus        54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            4566777889999987 4689999999854321111                     11233578888888875  3344


Q ss_pred             ceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEE
Q 016991           72 VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKV  150 (379)
Q Consensus        72 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl  150 (379)
                      .+.+.+..    -.+||||+.....-.-..+..++...++..+..++++.+.-|-. .|++|+||+.=|||+. ++.+.+
T Consensus       133 P~Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~i  207 (268)
T COG1718         133 PEPIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYI  207 (268)
T ss_pred             CCceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEE
Confidence            55565544    36899998433111111112334444788899999999998876 8999999999999999 799999


Q ss_pred             eeeccccCCCC
Q 016991          151 SDFGLSALPQQ  161 (379)
Q Consensus       151 ~DfGl~~~~~~  161 (379)
                      +|||.+.....
T Consensus       208 ID~~QaV~~~h  218 (268)
T COG1718         208 IDVSQAVTIDH  218 (268)
T ss_pred             EECccccccCC
Confidence            99998765443

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.66  E-value=2.7e-07  Score=92.05  Aligned_cols=138  Identities=23%  Similarity=0.375  Sum_probs=90.9

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeeccc---------------------------ccchH----HHHH------HH
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKST---------------------------ILKHR----MVDQ------IK   57 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~---------------------------~~~~~----~~~~------~~   57 (379)
                      ..|+.++-|.||.|+.. +|+.||||+.+..-                           ..-..    ..+.      +.
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            56889999999999997 49999999975310                           00011    1122      33


Q ss_pred             HHHHHHHhCC-----CCCcceEEEEEEeCCeEEEEEeccCCCChHHHH--HhcCCCCHHH-----HHHHHHHHHHHHHHH
Q 016991           58 REISIMKIVR-----HPNIVRLHEVLASRTKVYIILEFVTGGELFDKI--VHQGRLLEND-----CRRYFQQLIDAVAHC  125 (379)
Q Consensus        58 ~Ei~~l~~l~-----hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l--~~~~~l~e~~-----~~~~~~qil~~l~yl  125 (379)
                      +|...+.+++     .|++.-..=+++-.+.-.++|||++|-.+.+..  .. ...+...     +..++.|++      
T Consensus       210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f~~q~~------  282 (517)
T COG0661         210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAFLRQLL------  282 (517)
T ss_pred             HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHHHHHHH------
Confidence            4444554442     343322222334456678999999998887774  33 3444222     333333433      


Q ss_pred             HHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991          126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus       126 H~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                       ..|++|.|.+|.||+++.+|.+.+.|||+......
T Consensus       283 -~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         283 -RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             -hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence             37999999999999999999999999998865544

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.62  E-value=4.4e-07  Score=95.59  Aligned_cols=203  Identities=19%  Similarity=0.205  Sum_probs=144.3

Q ss_pred             HHHHHHHHHHhCCCCCcceEEEEEEeCC----eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 016991           55 QIKREISIMKIVRHPNIVRLHEVLASRT----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV  130 (379)
Q Consensus        55 ~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi  130 (379)
                      ...-|+..+..+.|+|++.++.+-....    .+.+..++|+.-++...+..-+..+....+.+..+++.|+.|+|+...
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l  307 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL  307 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence            3445666678889999999998865432    233456899999999999999999999999999999999999999966


Q ss_pred             eeecCCCC---cEEEccCCCeEEe--eeccccCCCCCcccccccccCCCCCchhhhccCCCC-CCchhHHHHHHHHHHHH
Q 016991          131 YHRDLKPE---NLLLDSYGNLKVS--DFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD-GSAADVWSCGVILFVLM  204 (379)
Q Consensus       131 ~HrDlkp~---NIll~~~~~lkl~--DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~~~DiwSlGvil~~ll  204 (379)
                      .|.-+...   +--.+..+....+  ||+.+...... .......-+..+.+||......+. ....|+|.+|..+..+.
T Consensus       308 ~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~-~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~  386 (1351)
T KOG1035|consen  308 EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDN-EKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQLS  386 (1351)
T ss_pred             ceeEEecccccccccCccceeecchhhhcccccCCCc-ccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhhh
Confidence            66655544   4444555666666  88876654432 222233345678888887665543 22369999999999998


Q ss_pred             hCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          205 AGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       205 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .|..+-....   ....+.      +.....+..+++.+|+.-++++|+++.+++.|||.+..
T Consensus       387 ~~~~i~~~~~---~~~~~l------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  387 QGEDISEKSA---VPVSLL------DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             hcCccccccc---chhhhh------ccccchhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence            8765421111   111111      11112267899999999999999999999999998654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.60  E-value=9.8e-07  Score=79.48  Aligned_cols=134  Identities=15%  Similarity=0.137  Sum_probs=84.3

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      ..||.|..+.||+.    .|..+++|......     ....+.+|.++++.+..-.  +.+.+.+....+...++||+++
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence            56899999999973    25567888875422     2245789999999886433  4677888877788899999999


Q ss_pred             CCC-hH--------------HHHHh------c---CCCCHHH-HHHHHHH----------HHHH-HHHHH----HCCcee
Q 016991           93 GGE-LF--------------DKIVH------Q---GRLLEND-CRRYFQQ----------LIDA-VAHCH----SKGVYH  132 (379)
Q Consensus        93 gg~-L~--------------~~l~~------~---~~l~e~~-~~~~~~q----------il~~-l~ylH----~~gi~H  132 (379)
                      |.+ +.              ..+..      .   ...+... ...+..+          +... ..+|.    ...++|
T Consensus        78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H  157 (226)
T TIGR02172        78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH  157 (226)
T ss_pred             CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence            863 11              11110      0   0111111 1111111          1111 12222    124789


Q ss_pred             ecCCCCcEEEccCCCeEEeeeccccC
Q 016991          133 RDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus       133 rDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      +|+.|.||++++++ +.++||+.+..
T Consensus       158 gD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       158 GDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             cCCCCCcEEEcCCC-cEEEechhcCc
Confidence            99999999999888 99999997653

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.59  E-value=5.2e-09  Score=103.46  Aligned_cols=242  Identities=19%  Similarity=0.188  Sum_probs=164.9

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN-IVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~-Iv~l~~~~~~~~~~~lv~   88 (379)
                      .|....-+++|+++++++.+...+...+ .+.+...        ....-++++|.+++||| .+..++-+..++..++.+
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~  313 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM  313 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence            4556677899999999998876555444 5544322        34556889999999999 777777778888999999


Q ss_pred             eccCCC-ChHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           89 EFVTGG-ELFD-KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        89 E~~~gg-~L~~-~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      +++.++ +... .-...-.+.+-+.....+.-+++++|+|+.-=+|||    ||+..+ +..+..||+......... ..
T Consensus       314 ~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~  387 (829)
T KOG0576|consen  314 RICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KP  387 (829)
T ss_pred             hhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc-cc
Confidence            999877 2111 111111233334455667778899999998778998    777655 778999999876544432 34


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC------CCCCHhHHHH
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP------FWFSTGATSL  240 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p------~~~s~~~~~l  240 (379)
                      .+..+++.++|||+.....+. ...|.|++|+--.++--|-+|-..+.  .....+..+. ..|      .|-...-+++
T Consensus       388 ~t~~~~~~~~~pev~~~~~~~-~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~~g~~p-~s~~L~~~~aw~~~~~~~~  463 (829)
T KOG0576|consen  388 RTAIGTPEPLAPEVIQENTID-GCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPMIGNGP-NSPMLTDKSAWSPVFHRDF  463 (829)
T ss_pred             ccCCCCCCCCCchhhcccccc-cCCCccCCCcchhhcCCCCCCCCCCc--cccCCCCCCC-CccccchhhhcCcccccCC
Confidence            567899999999999887776 78999999987677777776653311  1000011000 011      1111122257


Q ss_pred             HHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      ...|+..-|..|+....++.|.+|..-...
T Consensus       464 ~~~~~~g~P~~pkv~mgacfsKvfngCpl~  493 (829)
T KOG0576|consen  464 PAPCLNGLPPTPKVHMGACFSKVFNGCPLR  493 (829)
T ss_pred             cccccCCCCCCCcchhhHHHHHHhccCccc
Confidence            788999999999999999999999764433

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.50  E-value=1.6e-06  Score=77.75  Aligned_cols=137  Identities=18%  Similarity=0.333  Sum_probs=82.6

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEEEE---EeCCeEEEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHEVL---ASRTKVYIIL   88 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~~~---~~~~~~~lv~   88 (379)
                      ++.|+.|..+.||++....  ..+++|.....     .....+.+|..+++.+....  +.+++...   ......+++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~   74 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM   74 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence            4689999999999999864  58999986443     34567888999988876333  45666543   2344689999


Q ss_pred             eccCCCChHH----------------HHH---hc----CCCCHHH---H---HHH---------------HHHHHH-HHH
Q 016991           89 EFVTGGELFD----------------KIV---HQ----GRLLEND---C---RRY---------------FQQLID-AVA  123 (379)
Q Consensus        89 E~~~gg~L~~----------------~l~---~~----~~l~e~~---~---~~~---------------~~qil~-~l~  123 (379)
                      ++++|..+..                .+.   ..    .......   .   ...               ...+.. .+.
T Consensus        75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (239)
T PF01636_consen   75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ  154 (239)
T ss_dssp             EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred             EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence            9999987766                111   00    0011000   0   000               111222 333


Q ss_pred             HHHH-------CCceeecCCCCcEEEc-cCCCeEEeeecccc
Q 016991          124 HCHS-------KGVYHRDLKPENLLLD-SYGNLKVSDFGLSA  157 (379)
Q Consensus       124 ylH~-------~gi~HrDlkp~NIll~-~~~~lkl~DfGl~~  157 (379)
                      .+++       ..++|+|+.|.||+++ +++.+-|+||+.+.
T Consensus       155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence            3332       4599999999999999 66667899998653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.35  E-value=6.7e-06  Score=74.81  Aligned_cols=134  Identities=14%  Similarity=0.127  Sum_probs=83.2

Q ss_pred             eecccCC-eEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEeccCC
Q 016991           16 TIGEGTF-AKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYIILEFVTG   93 (379)
Q Consensus        16 ~LG~G~~-g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv~E~~~g   93 (379)
                      .|..|.+ +.||+....  +..+.+|+.....      ...+.+|+.+++.+. +--+.+++++....+..++|||+++|
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence            4555666 788988653  4688889765432      235678898888874 34456778777766778999999999


Q ss_pred             CChHHHHH----------------hcCCCCH-----H-HHHHHHHH-----------------------HHHHHHHH---
Q 016991           94 GELFDKIV----------------HQGRLLE-----N-DCRRYFQQ-----------------------LIDAVAHC---  125 (379)
Q Consensus        94 g~L~~~l~----------------~~~~l~e-----~-~~~~~~~q-----------------------il~~l~yl---  125 (379)
                      .++.....                .-..++.     . .......+                       +...+..|   
T Consensus        77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (244)
T cd05150          77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT  156 (244)
T ss_pred             ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence            77653310                0001110     0 00000000                       11112222   


Q ss_pred             ----HHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          126 ----HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       126 ----H~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                          ....++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             CCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence                12348999999999999997778899999764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PLN02876 acyl-CoA dehydrogenase

Probab=98.31  E-value=1.1e-05  Score=86.15  Aligned_cols=146  Identities=16%  Similarity=0.369  Sum_probs=91.6

Q ss_pred             eeeecccCCeEEEEEEECCCC--cEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCc--ceEEEEEEeC---CeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETG--ESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNI--VRLHEVLASR---TKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~--~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~I--v~l~~~~~~~---~~~~   85 (379)
                      ++.|+.|.++.+|+......+  ..+++|+........  ....+.+|+.+|+.+. |+++  .+++.++.+.   +..|
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence            577899999999998765432  467777654332211  2346889999999996 6665  7777777654   4688


Q ss_pred             EEEeccCCCChHH--------------------HHHh--cC-----CC---------CHHHHHHHHHH------------
Q 016991           86 IILEFVTGGELFD--------------------KIVH--QG-----RL---------LENDCRRYFQQ------------  117 (379)
Q Consensus        86 lv~E~~~gg~L~~--------------------~l~~--~~-----~l---------~e~~~~~~~~q------------  117 (379)
                      +||||++|..+.+                    .+..  .-     .+         ...++..|..|            
T Consensus       121 lVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~  200 (822)
T PLN02876        121 YIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPR  200 (822)
T ss_pred             EEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCC
Confidence            9999998864321                    1110  00     00         01122222221            


Q ss_pred             ---HHHHHHHHHH-----------CCceeecCCCCcEEEccC-CC-eEEeeeccccCCCC
Q 016991          118 ---LIDAVAHCHS-----------KGVYHRDLKPENLLLDSY-GN-LKVSDFGLSALPQQ  161 (379)
Q Consensus       118 ---il~~l~ylH~-----------~gi~HrDlkp~NIll~~~-~~-lkl~DfGl~~~~~~  161 (379)
                         +...+.+|..           ..++|+|++|.||+++.+ +. .-|.||+++..-..
T Consensus       201 ~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdP  260 (822)
T PLN02876        201 NPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQ  260 (822)
T ss_pred             ChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCCh
Confidence               2233556632           259999999999999853 33 57999998875443

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.22  E-value=2.8e-05  Score=67.96  Aligned_cols=128  Identities=23%  Similarity=0.298  Sum_probs=90.8

Q ss_pred             cCeeeeeeecccCC-eEEEEEEECCCCcEEEEEEeec----------ccccch--------HHHHHHHHHHHHHHhCC--
Q 016991            9 AKYEVGRTIGEGTF-AKVRFAQNRETGESVAMKVLAK----------STILKH--------RMVDQIKREISIMKIVR--   67 (379)
Q Consensus         9 ~~y~~~~~LG~G~~-g~V~~a~~~~~~~~vaiK~i~~----------~~~~~~--------~~~~~~~~Ei~~l~~l~--   67 (379)
                      .+++.++.||.|+- |.||+++..  |+.||+|++..          +.....        ....-+..|.++-.+|+  
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            68899999999999 999999874  78999999321          011100        12234667777765554  


Q ss_pred             -CCCc--ceEEEEEEeC------------------CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 016991           68 -HPNI--VRLHEVLASR------------------TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH  126 (379)
Q Consensus        68 -hp~I--v~l~~~~~~~------------------~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH  126 (379)
                       +.++  |+.++++.-.                  ....||.||++...         .++    ..-+.+|++-+..+|
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~----~~~~~~~~~dl~~~~  181 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQ----IRDIPQMLRDLKILH  181 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccc----hhHHHHHHHHHHHHH
Confidence             5666  9999987321                  13467888876543         222    233567888889999


Q ss_pred             HCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991          127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus       127 ~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      ..||+-+|+++.|..     .-+|+|||.+
T Consensus       182 k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  182 KLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HCCeeeccCcccccc-----CCEEEecccC
Confidence            999999999999986     3489999854

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.19  E-value=1.9e-05  Score=67.10  Aligned_cols=129  Identities=19%  Similarity=0.303  Sum_probs=91.7

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcc-eEEEEEEeCCeEEEEEecc
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV-RLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv-~l~~~~~~~~~~~lv~E~~   91 (379)
                      ..+.||+|.+|.||++.+.  |..+|+|+-..+.     ....+..|.++|..++-.++. +++.+-.    .++.|||+
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds-----~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i   94 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRRDS-----PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYI   94 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecCCc-----chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhh
Confidence            3577999999999999986  6799999765443     236788999999999876664 3444333    34559999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCC-CCcEEEccCCCeEEeeeccccCC
Q 016991           92 TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK-PENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        92 ~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlk-p~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .|-.|.+.....   +    ++-...+++.-.-|-..||-|+.|. |...++-.++.+.|+||..+++.
T Consensus        95 ~G~~L~~~~~~~---~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112          95 DGRPLGKLEIGG---D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             cCcchhhhhhcc---c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            998876544211   1    2333456666566778899999997 55555555569999999988743

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.18  E-value=1.2e-05  Score=80.32  Aligned_cols=142  Identities=24%  Similarity=0.347  Sum_probs=86.1

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeeccc----------------------------ccchHHHHHHH------HHH
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKST----------------------------ILKHRMVDQIK------REI   60 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~----------------------------~~~~~~~~~~~------~Ei   60 (379)
                      +.||.-+.|.||+|+.+. |+.||||+-+..-                            ..-.+..+.+.      +|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            678999999999999986 9999999964310                            00001112222      233


Q ss_pred             HHH----HhCCCCC---cceEEEEEE-eCCeEEEEEeccCCCChHHH--HHhcCCCCHHHHHHHHHHHHHHHH-HHHHCC
Q 016991           61 SIM----KIVRHPN---IVRLHEVLA-SRTKVYIILEFVTGGELFDK--IVHQGRLLENDCRRYFQQLIDAVA-HCHSKG  129 (379)
Q Consensus        61 ~~l----~~l~hp~---Iv~l~~~~~-~~~~~~lv~E~~~gg~L~~~--l~~~~~l~e~~~~~~~~qil~~l~-ylH~~g  129 (379)
                      +..    +.+.|-+   =|.+-.++. -.....++||||+|..+.+.  +.+. .++...+   ...+.++.. -+=..|
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i---~~~l~~~~~~qIf~~G  321 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR-GISPHDI---LNKLVEAYLEQIFKTG  321 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc-CCCHHHH---HHHHHHHHHHHHHhcC
Confidence            322    2333444   122223332 23467899999999776554  4443 3443322   222222221 122578


Q ss_pred             ceeecCCCCcEEEcc----CCCeEEeeeccccCCCC
Q 016991          130 VYHRDLKPENLLLDS----YGNLKVSDFGLSALPQQ  161 (379)
Q Consensus       130 i~HrDlkp~NIll~~----~~~lkl~DfGl~~~~~~  161 (379)
                      ++|+|=+|.||+++.    ++.+.+.|||+......
T Consensus       322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            999999999999984    56899999999875544

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=98.16  E-value=8.3e-08  Score=102.86  Aligned_cols=257  Identities=14%  Similarity=0.059  Sum_probs=169.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL--KHRMVDQIKREISIMKIVRHPNIVRLHEVLA--SRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~~~   82 (379)
                      .+..|++.-.+|.|.+++-..-+.+.+  .+.+++-..-.+.  .+...+.+..|..-++...|+++...+.-..  +..
T Consensus      1227 ~~e~~EV~l~i~~~~~~R~k~Lr~kid--~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ 1304 (2724)
T KOG1826|consen 1227 AMEHSEVNLGISNHFHFRNKWLRSKID--WFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSEST 1304 (2724)
T ss_pred             HhhhhheeeecccceeeccchHhhhhc--eeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCCh
Confidence            345566655566666554432222222  3344443221111  1112334555666666778999888776654  345


Q ss_pred             eEEEEEeccCCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC-----ceeecCCCCcEEEccCCCeEEeee
Q 016991           83 KVYIILEFVTGGELFDKIVHQG----RLLENDCRRYFQQLIDAVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDF  153 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~----~l~e~~~~~~~~qil~~l~ylH~~g-----i~HrDlkp~NIll~~~~~lkl~Df  153 (379)
                      ..|..++|+.+|.+++.|.+.-    .+.+.-+.....+.+.+..-+|++.     .+|+++|+-|.+|..+-++|+.++
T Consensus      1305 ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~ 1384 (2724)
T KOG1826|consen 1305 EEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKG 1384 (2724)
T ss_pred             HHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCccccccc
Confidence            6789999999999999997642    3344445555556588888888652     789999999999999999999999


Q ss_pred             ccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCC
Q 016991          154 GLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFW  232 (379)
Q Consensus       154 Gl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~  232 (379)
                      |+.+.............+++.|++|++...-.+. .++|+|+.|+-+|....|..+|-......+...+.... ...+..
T Consensus      1385 gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t-~rsdilr~s~~ly~rs~~n~~fi~flq~~Lkgiidn~tf~sIe~l 1463 (2724)
T KOG1826|consen 1385 GLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFT-KRSDILRRSLSLYLRSDGNAYFIFFLQPALKGIIDNHTFFSIEKL 1463 (2724)
T ss_pred             ccccccCchHhhhhhhhCCHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHhcccHHHHHHHHHHHcCccccccccccccc
Confidence            9998554444445566788999999998766664 56999999999999999998885444444433343332 344444


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .|.++-.....+|-..-..||.-...+.-|.|..
T Consensus      1464 ~pgdaNve~~~~Ll~K~~~rp~q~isls~d~~a~ 1497 (2724)
T KOG1826|consen 1464 KPGDANVEALHRLLWKYMERPGQYISLSRDHFAV 1497 (2724)
T ss_pred             CCCcccHHHHHHHHHHhhhcchhhhhcccccccc
Confidence            4555555555555566677888888887776643

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.16  E-value=7.2e-05  Score=65.73  Aligned_cols=130  Identities=20%  Similarity=0.270  Sum_probs=92.2

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeeccc-------------ccchHHHHHHHHHHHHHHhCC------CCCcceEE
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKST-------------ILKHRMVDQIKREISIMKIVR------HPNIVRLH   75 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~-------------~~~~~~~~~~~~Ei~~l~~l~------hp~Iv~l~   75 (379)
                      ..||.|+.=.||.  +. .....+||++....             .......++..+|+.....+.      +.+|.+++
T Consensus         7 ~~i~~G~~R~cy~--HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQ--HP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEE--CC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            5689999999984  44 34566889987655             001112355667776665555      78999999


Q ss_pred             EEEEeCCeEEEEEeccC------CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---
Q 016991           76 EVLASRTKVYIILEFVT------GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---  146 (379)
Q Consensus        76 ~~~~~~~~~~lv~E~~~------gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---  146 (379)
                      |+.+++.-.-+|+|.+.      +-+|.+++.+ +.+++ ...   ..+-.-..||-+.+|+.+|++|.||++..++   
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~  158 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE  158 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence            99999998999999864      2457777744 55665 333   3444556688999999999999999996433   


Q ss_pred             -CeEEee
Q 016991          147 -NLKVSD  152 (379)
Q Consensus       147 -~lkl~D  152 (379)
                       .+.|+|
T Consensus       159 ~~lvlID  165 (199)
T PF10707_consen  159 FRLVLID  165 (199)
T ss_pred             eEEEEEe
Confidence             477776

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.07  E-value=4.1e-05  Score=69.34  Aligned_cols=72  Identities=7%  Similarity=0.118  Sum_probs=44.6

Q ss_pred             eeecccCCe-EEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC---CcceEEEEEEeC---CeEEEE
Q 016991           15 RTIGEGTFA-KVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP---NIVRLHEVLASR---TKVYII   87 (379)
Q Consensus        15 ~~LG~G~~g-~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp---~Iv~l~~~~~~~---~~~~lv   87 (379)
                      +.|+.|+.. .||..     +..+++|+.....     ....+.+|..+++.+...   -+.++++.....   ...+++
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~~-----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l   72 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSAAG-----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSV   72 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCccc-----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEE
Confidence            567766666 58875     2356778654311     235788999999887532   234444433321   245889


Q ss_pred             EeccCCCCh
Q 016991           88 LEFVTGGEL   96 (379)
Q Consensus        88 ~E~~~gg~L   96 (379)
                      |++++|.++
T Consensus        73 ~~~i~G~~l   81 (235)
T cd05155          73 YRWLEGETA   81 (235)
T ss_pred             EEeecCCCC
Confidence            999998665

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.87  E-value=0.00032  Score=63.32  Aligned_cols=75  Identities=23%  Similarity=0.346  Sum_probs=48.3

Q ss_pred             eeeecccCCeEEEEEEECC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeEEEEEecc
Q 016991           14 GRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN-IVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~-Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      ++.|..|-...+|++.... .+..|++|+......    ..-...+|..+++.+...+ ..+++....  +  .++|||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEee
Confidence            4667888899999987543 357888997654221    1123357888888885433 344444332  2  3799999


Q ss_pred             CCCCh
Q 016991           92 TGGEL   96 (379)
Q Consensus        92 ~gg~L   96 (379)
                      +|.++
T Consensus        75 ~G~~l   79 (235)
T cd05157          75 PGRTL   79 (235)
T ss_pred             CCCcC
Confidence            98665

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.83  E-value=8.2e-05  Score=64.96  Aligned_cols=98  Identities=16%  Similarity=0.263  Sum_probs=78.5

Q ss_pred             HHHHHHHHhCCC-CCcceEEEEEEeCCeEEEEEeccCCCChHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHH---CC
Q 016991           57 KREISIMKIVRH-PNIVRLHEVLASRTKVYIILEFVTGGELFDK---IVHQGRLLENDCRRYFQQLIDAVAHCHS---KG  129 (379)
Q Consensus        57 ~~Ei~~l~~l~h-p~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~---l~~~~~l~e~~~~~~~~qil~~l~ylH~---~g  129 (379)
                      ..|.-+|+.+++ +++.+++|.+-.    +++.||...+++...   +.+-...++..+.+++.+++..+++++.   ..
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            358888999986 699999998843    568899976655421   1122346788999999999999999987   45


Q ss_pred             ceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991          130 VYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus       130 i~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      +.-.|++|+|+-++++|++|++|...+..
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcch
Confidence            88899999999999999999999986644

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.79  E-value=0.00069  Score=65.90  Aligned_cols=80  Identities=19%  Similarity=0.208  Sum_probs=54.2

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccc--cc--hHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LK--HRMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~--~~--~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+.||.|.++.||++.+...++.|+||.-.....  ..  .-..++...|...|+.+.   ..++.+++.+  +.+..++
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            4679999999999999865446899997431100  01  113456777888887763   3457777766  3355789


Q ss_pred             EEeccCCCC
Q 016991           87 ILEFVTGGE   95 (379)
Q Consensus        87 v~E~~~gg~   95 (379)
                      ||||+++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998644

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.73  E-value=0.00018  Score=66.02  Aligned_cols=135  Identities=16%  Similarity=0.222  Sum_probs=78.7

Q ss_pred             eecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEEeccCCC
Q 016991           16 TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~lv~E~~~gg   94 (379)
                      .+..|-.+.+|+..  .++..+++|+......   ...-...+|..+++.+....+ .+++....    -++|+||++|.
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~---~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~   73 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCK---ALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGE   73 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCcccc---cccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCc
Confidence            45678888999887  3567888887543211   110124678888888864333 33443332    36899999986


Q ss_pred             ChHH----------HH----Hh--cC-----CCC-HHHHHHHHHHH---------HHHHHHHHH--------CCceeecC
Q 016991           95 ELFD----------KI----VH--QG-----RLL-ENDCRRYFQQL---------IDAVAHCHS--------KGVYHRDL  135 (379)
Q Consensus        95 ~L~~----------~l----~~--~~-----~l~-e~~~~~~~~qi---------l~~l~ylH~--------~gi~HrDl  135 (379)
                      .+..          .+    .+  ..     +++ ...+..+..++         ...+..+-.        ..++|+|+
T Consensus        74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl  153 (256)
T TIGR02721        74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV  153 (256)
T ss_pred             ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence            6431          11    10  01     111 11222332222         111222221        25899999


Q ss_pred             CCCcEEEccCCCeEEeeeccccCCC
Q 016991          136 KPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus       136 kp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      .|.||++++++ +.|+||..+....
T Consensus       154 ~~~Nil~~~~~-~~lIDwE~a~~gd  177 (256)
T TIGR02721       154 HAYNLVVTPQG-LKLIDWEYASDGD  177 (256)
T ss_pred             CcCcEEEeCCC-CEEEeccccCcCC
Confidence            99999999877 7899999876543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK10593 hypothetical protein; Provisional

Probab=97.68  E-value=0.00088  Score=62.93  Aligned_cols=76  Identities=13%  Similarity=0.122  Sum_probs=53.9

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC---CCcceEEEEEEe---CCeEEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH---PNIVRLHEVLAS---RTKVYII   87 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h---p~Iv~l~~~~~~---~~~~~lv   87 (379)
                      .+.||.|..+.||..... ++ .+.+|.. +...    ....+..|...|+.+..   -.+.++++++..   .+.-++|
T Consensus        19 ~~~i~~G~~~~vy~~~~~-~~-~~~~k~~-~~~~----~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV   91 (297)
T PRK10593         19 VECISEQPYAALWALYDS-QG-NPMPLMA-RSFS----TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL   91 (297)
T ss_pred             eeecCCccceeEEEEEcC-CC-CEEEEEe-cccc----cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence            567999999999998653 23 4666764 2210    12578889999988853   357778877653   4668999


Q ss_pred             EeccCCCCh
Q 016991           88 LEFVTGGEL   96 (379)
Q Consensus        88 ~E~~~gg~L   96 (379)
                      ||+++|.++
T Consensus        92 mE~i~G~~~  100 (297)
T PRK10593         92 LERLRGVSV  100 (297)
T ss_pred             EeccCCEec
Confidence            999998754

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.62  E-value=0.00048  Score=64.50  Aligned_cols=136  Identities=18%  Similarity=0.196  Sum_probs=82.7

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEE------EEEeCCeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHE------VLASRTKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~------~~~~~~~~~   85 (379)
                      .+.|..|....+|+....  +..+++|+....      ....+..|+.++..+.+.+  +.+++.      +....+..+
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~   90 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPA   90 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceE
Confidence            567888888999998653  457888987531      1245777888888775332  444433      223345678


Q ss_pred             EEEeccCCCChHH----HHH----------hc-CCCCH--------HHHH------------HHHHHHHHHHHHHHH---
Q 016991           86 IILEFVTGGELFD----KIV----------HQ-GRLLE--------NDCR------------RYFQQLIDAVAHCHS---  127 (379)
Q Consensus        86 lv~E~~~gg~L~~----~l~----------~~-~~l~e--------~~~~------------~~~~qil~~l~ylH~---  127 (379)
                      +++++++|..+..    ...          .. ..+..        ....            .....+..++.++.+   
T Consensus        91 ~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~  170 (296)
T cd05153          91 ALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDP  170 (296)
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhh
Confidence            9999999866421    000          00 00000        0000            011112334444443   


Q ss_pred             ----CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          128 ----KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       128 ----~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                          .+++|+|+.|.||++++++.+.|+||+.+.
T Consensus       171 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         171 SDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             hcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence                479999999999999987777899999764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.60  E-value=6.7e-05  Score=69.67  Aligned_cols=137  Identities=17%  Similarity=0.265  Sum_probs=97.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc-----------------chHHH--HHHHHHHHHHHhCCC--
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----------------KHRMV--DQIKREISIMKIVRH--   68 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-----------------~~~~~--~~~~~Ei~~l~~l~h--   68 (379)
                      =+.+++.||-|.-+.||.+-+. .|++.++|.-+.....                 .....  -...+|...|+.|..  
T Consensus        93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3667899999999999999885 5889999975322110                 00011  124578888888853  


Q ss_pred             CCcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCe
Q 016991           69 PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNL  148 (379)
Q Consensus        69 p~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~l  148 (379)
                      --+.+.++    .+.-++|||++.|-.|...-.      ...+..+...++.-+.-|-.+|+||+|..-=||++++++.+
T Consensus       172 fpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~------v~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i  241 (465)
T KOG2268|consen  172 FPVPKPID----HNRHCVVMELVDGYPLRQVRH------VEDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKI  241 (465)
T ss_pred             CCCCCccc----ccceeeHHHhhcccceeeeee------cCChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCE
Confidence            23344444    345679999999887754321      12244566677777788899999999999999999999999


Q ss_pred             EEeeecccc
Q 016991          149 KVSDFGLSA  157 (379)
Q Consensus       149 kl~DfGl~~  157 (379)
                      +++||-.+.
T Consensus       242 ~vIDFPQmv  250 (465)
T KOG2268|consen  242 VVIDFPQMV  250 (465)
T ss_pred             EEeechHhh
Confidence            999997554

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.59  E-value=0.0011  Score=62.63  Aligned_cols=137  Identities=16%  Similarity=0.179  Sum_probs=79.7

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEEE------EEeCCeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHEV------LASRTKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~~------~~~~~~~~   85 (379)
                      .+.++.|....+|++.. .+| .+++|+.....     ..+.+..|..++..|....  +.+++..      ....+..+
T Consensus        27 i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~   99 (307)
T TIGR00938        27 LKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPA   99 (307)
T ss_pred             ccccCCccccceEEEEe-CCC-cEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEE
Confidence            56677888889998864 334 67788764421     1234556677776664222  3344331      12346678


Q ss_pred             EEEeccCCCChH----H-------HH---Hh-cCCCC--------HHHH----H-----------HHHHHHHHHHHHHHH
Q 016991           86 IILEFVTGGELF----D-------KI---VH-QGRLL--------ENDC----R-----------RYFQQLIDAVAHCHS  127 (379)
Q Consensus        86 lv~E~~~gg~L~----~-------~l---~~-~~~l~--------e~~~----~-----------~~~~qil~~l~ylH~  127 (379)
                      ++++|++|.++.    .       .+   .. ...++        ....    .           .....+...++++..
T Consensus       100 ~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~  179 (307)
T TIGR00938       100 CLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDK  179 (307)
T ss_pred             EEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHh
Confidence            999999885431    1       11   00 00110        0000    0           001122334555532


Q ss_pred             -------CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          128 -------KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       128 -------~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                             .+++|+|+.+.||+++.++...|+||+.+.
T Consensus       180 ~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       180 FWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             hhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence                   689999999999999998877899999764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.58  E-value=0.00095  Score=63.22  Aligned_cols=145  Identities=21%  Similarity=0.294  Sum_probs=99.4

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeeccc-------------------c---cchHHH-HHHHHHHHHHHhCCCC
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-------------------I---LKHRMV-DQIKREISIMKIVRHP   69 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~-------------------~---~~~~~~-~~~~~Ei~~l~~l~hp   69 (379)
                      |-..|..|.-+.||.|... +|..+|||+..-+-                   .   ....++ -....|++.|++++..
T Consensus       148 inGCiSTGKEANVYHat~~-dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a  226 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEE-DGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA  226 (520)
T ss_pred             cccccccCccceeEeeecC-CCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence            3456778888999999875 68889999974210                   0   011122 2367889999998866


Q ss_pred             CcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCceeecCCCCcEEEccCCCe
Q 016991           70 NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC-HSKGVYHRDLKPENLLLDSYGNL  148 (379)
Q Consensus        70 ~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~yl-H~~gi~HrDlkp~NIll~~~~~l  148 (379)
                      .|.-.--+...  .-.|||+|+.+...-.-..++..++...+..+-+|++..+.-| |..+++|.||.--|+|+.+ |.+
T Consensus       227 GIP~PePIlLk--~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyhd-G~l  303 (520)
T KOG2270|consen  227 GIPCPEPILLK--NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHD-GKL  303 (520)
T ss_pred             CCCCCCceeee--cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEEC-CEE
Confidence            64332222221  2468999994322222222345788888999999999888877 5679999999999999965 899


Q ss_pred             EEeeeccccCCCC
Q 016991          149 KVSDFGLSALPQQ  161 (379)
Q Consensus       149 kl~DfGl~~~~~~  161 (379)
                      .++|-+.+.....
T Consensus       304 yiIDVSQSVE~DH  316 (520)
T KOG2270|consen  304 YIIDVSQSVEHDH  316 (520)
T ss_pred             EEEEccccccCCC
Confidence            9999987754433

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.58  E-value=0.00085  Score=63.04  Aligned_cols=76  Identities=18%  Similarity=0.219  Sum_probs=49.1

Q ss_pred             eeeecccCCeEEEEEEECC------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRE------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVYI   86 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~l   86 (379)
                      ++.|..|-...+|+.....      +++.+++|+......    ......+|..+++.+...++ .+++..+..    ..
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~   74 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE----LLIDRERELVVFARLSERNLGPKLYGIFPN----GR   74 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc----ceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence            3566778888999987643      267899998654321    12346688888888764333 345555432    35


Q ss_pred             EEeccCCCChH
Q 016991           87 ILEFVTGGELF   97 (379)
Q Consensus        87 v~E~~~gg~L~   97 (379)
                      |+||++|..+.
T Consensus        75 v~e~i~G~~l~   85 (302)
T cd05156          75 IEEFIPSRTLT   85 (302)
T ss_pred             hhheeCCCcCC
Confidence            89999886653

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.47  E-value=0.00056  Score=67.21  Aligned_cols=163  Identities=21%  Similarity=0.240  Sum_probs=105.9

Q ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Q 016991           54 DQIKREISIMKIVRHPNIVRLHEVLAS-RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH  132 (379)
Q Consensus        54 ~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~H  132 (379)
                      .++.--...++.++|+|...++++... .....+|+|++ +.+|.+.+..+. +-...       ++           +|
T Consensus        27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~-l~~~s-------~~-----------~~   86 (725)
T KOG1093|consen   27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN-LKDES-------LL-----------AH   86 (725)
T ss_pred             HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc-cchhh-------hc-----------cc
Confidence            445566788899999999999988764 34588999998 778888776543 21111       10           22


Q ss_pred             ecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCC
Q 016991          133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE  212 (379)
Q Consensus       133 rDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~  212 (379)
                      |-+ +-       +.++.+|    .....             |  |      ...++++||||+|.++.++.-|...|..
T Consensus        87 ~~~-~~-------~~~~~td----~~~t~-------------~--~------~~~~pKsdVwsl~~i~~el~L~~~l~~~  133 (725)
T KOG1093|consen   87 GVL-HL-------NIIYITD----HFLTK-------------Y--P------SPIGPKSDVWSLGFIILELYLGISLEAE  133 (725)
T ss_pred             ccc-ee-------hhhhccc----ccccc-------------C--C------CCCCcchhhhhHHHHHHHHHHhhHHHHH
Confidence            211 11       1233333    00000             0  1      1113599999999999999999887766


Q ss_pred             CChHHHHHHHHhcccCCC------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          213 TDLPTLYKKINAAEFSCP------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       213 ~~~~~~~~~i~~~~~~~p------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      ....+....+.+.....-            -.++....++..+|+-..|..||...++.+++-|...+.
T Consensus       134 ~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev~~  202 (725)
T KOG1093|consen  134 LTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEVYK  202 (725)
T ss_pred             HHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHHHh
Confidence            555554444443221111            114666788999999999999999999999999977643

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.34  E-value=0.0028  Score=59.65  Aligned_cols=147  Identities=15%  Similarity=0.194  Sum_probs=86.0

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC--CcceEEEEEEeCC--eEEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP--NIVRLHEVLASRT--KVYI   86 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp--~Iv~l~~~~~~~~--~~~l   86 (379)
                      ..+++....|....+|.....  ++.+++. ... ............+|..+++.+.--  -+...++++.+..  ..|.
T Consensus        27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~-~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~  102 (321)
T COG3173          27 LLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPP-RGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFY  102 (321)
T ss_pred             CceeeeccCCcccceEEEecC--CceEEEe-cCC-ccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceE
Confidence            445555555666666666654  7888888 221 122223456778899999887642  2334455555444  6799


Q ss_pred             EEeccCCCChHH----------HHH--------h--c---------CC---CCHHHHHHHHHH--------------HHH
Q 016991           87 ILEFVTGGELFD----------KIV--------H--Q---------GR---LLENDCRRYFQQ--------------LID  120 (379)
Q Consensus        87 v~E~~~gg~L~~----------~l~--------~--~---------~~---l~e~~~~~~~~q--------------il~  120 (379)
                      ||+|++|..+.+          +..        .  +         +.   ....+..++..+              ...
T Consensus       103 v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~  182 (321)
T COG3173         103 VMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADR  182 (321)
T ss_pred             EEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHH
Confidence            999998833211          111        0  0         00   001111111111              122


Q ss_pred             HHHHHHH--------CCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991          121 AVAHCHS--------KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus       121 ~l~ylH~--------~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      -..+++.        ..++|+|+.+.||+++.++-+=+.||+++.+.+.
T Consensus       183 ~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         183 LIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             HHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence            2334443        2489999999999999999899999999876554

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.33  E-value=0.0026  Score=59.11  Aligned_cols=31  Identities=23%  Similarity=0.379  Sum_probs=25.6

Q ss_pred             CceeecCCCCcEEEccCCC-eEEeeeccccCC
Q 016991          129 GVYHRDLKPENLLLDSYGN-LKVSDFGLSALP  159 (379)
Q Consensus       129 gi~HrDlkp~NIll~~~~~-lkl~DfGl~~~~  159 (379)
                      .++|+|++|.||++++++. .-|.||+.+...
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            4899999999999997565 469999987643

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK05231 homoserine kinase; Provisional

Probab=97.28  E-value=0.012  Score=55.72  Aligned_cols=136  Identities=15%  Similarity=0.177  Sum_probs=74.2

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEE------EEEeCCeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHE------VLASRTKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~------~~~~~~~~~   85 (379)
                      .+.|+.|....+|+.... +| .+++|+...  . .   .+.+..|+.++..|...+  +.+++.      +....+..+
T Consensus        27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~-~---~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~   98 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--L-T---AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPA   98 (319)
T ss_pred             cchhccccccceEEEEeC-CC-cEEEEEecc--C-C---hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEE
Confidence            355677888899998753 33 688898751  1 1   133444556555553211  233332      123356789


Q ss_pred             EEEeccCCCChH-----------HHHH---h-cCCC--------C--H--HHHHH-----------HHHHHH-HHHHHHH
Q 016991           86 IILEFVTGGELF-----------DKIV---H-QGRL--------L--E--NDCRR-----------YFQQLI-DAVAHCH  126 (379)
Q Consensus        86 lv~E~~~gg~L~-----------~~l~---~-~~~l--------~--e--~~~~~-----------~~~qil-~~l~ylH  126 (379)
                      ++++|++|..+.           ..+.   . ...+        .  .  .....           .+.+.+ ..++.+.
T Consensus        99 ~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  178 (319)
T PRK05231         99 AIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLA  178 (319)
T ss_pred             EEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhh
Confidence            999999986431           1111   0 0001        0  0  00001           111111 1222332


Q ss_pred             -------HCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          127 -------SKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       127 -------~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                             ..|+||+|+.|.||+++.+...-|+||+.+.
T Consensus       179 ~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        179 SAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             ccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence                   2489999999999999966556899999764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.06  E-value=0.0075  Score=57.69  Aligned_cols=77  Identities=14%  Similarity=0.155  Sum_probs=48.0

Q ss_pred             eecccCCeEEEEEEECCCCcEEEEEEeeccc-c-c--chHHHHHHHHHHHHHHhCC--CC-CcceEEEEEEeCCeEEEEE
Q 016991           16 TIGEGTFAKVRFAQNRETGESVAMKVLAKST-I-L--KHRMVDQIKREISIMKIVR--HP-NIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        16 ~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~-~-~--~~~~~~~~~~Ei~~l~~l~--hp-~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .||.|...-||++.+...++.|+||--...- + .  -.-..++..-|...|+...  -| ++.+++.+  +.+...+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            5799999999999986444689998642110 0 0  0122355667788887664  34 45555543  334456899


Q ss_pred             eccCCC
Q 016991           89 EFVTGG   94 (379)
Q Consensus        89 E~~~gg   94 (379)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            998643

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.93  E-value=0.014  Score=56.94  Aligned_cols=76  Identities=9%  Similarity=0.092  Sum_probs=50.3

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccc-cch---HHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKH---RMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~-~~~---~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+.||.|....||+..+.  +..|+||.-..... ...   ....+...|...|+.+.   ..++.+++.+..+  .-++
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vl  112 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALI  112 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEE
Confidence            578899999999998873  45688987542111 000   12344555677776654   2477788887774  4577


Q ss_pred             EEeccCC
Q 016991           87 ILEFVTG   93 (379)
Q Consensus        87 v~E~~~g   93 (379)
                      +||++++
T Consensus       113 vME~L~~  119 (418)
T PLN02756        113 GMRYLEP  119 (418)
T ss_pred             EEeecCC
Confidence            8999977

>PLN02236 choline kinase

Probab=96.91  E-value=0.0088  Score=57.42  Aligned_cols=136  Identities=17%  Similarity=0.232  Sum_probs=79.5

Q ss_pred             eeeecccCCeEEEEEEECC----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRE----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVYIIL   88 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~lv~   88 (379)
                      ...|-.|-...+|++....    .++.|++|+.....   ...++ ..+|..+++.+..-++ .++++.+.. +   .|.
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~  112 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN-G---RVE  112 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECC-c---eEE
Confidence            3456568888999987432    34789999875432   11222 2678888888864444 355565543 2   478


Q ss_pred             eccCCCChHHH----------H----Hh--cCC-------CCHHHHHHHHHHHH-----------------HHHHHH---
Q 016991           89 EFVTGGELFDK----------I----VH--QGR-------LLENDCRRYFQQLI-----------------DAVAHC---  125 (379)
Q Consensus        89 E~~~gg~L~~~----------l----~~--~~~-------l~e~~~~~~~~qil-----------------~~l~yl---  125 (379)
                      +|++|.++...          +    .+  ...       .....+..+..++.                 ..+..|   
T Consensus       113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~  192 (344)
T PLN02236        113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE  192 (344)
T ss_pred             EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence            88887665311          1    00  001       11223333332221                 111111   


Q ss_pred             -H----HCCceeecCCCCcEEEcc-CCCeEEeeecccc
Q 016991          126 -H----SKGVYHRDLKPENLLLDS-YGNLKVSDFGLSA  157 (379)
Q Consensus       126 -H----~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~  157 (379)
                       .    ...++|+|+++.||++++ ++.+.++||..+.
T Consensus       193 ~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        193 LSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             hcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence             1    235899999999999986 4689999998764

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.87  E-value=0.02  Score=53.85  Aligned_cols=29  Identities=31%  Similarity=0.560  Sum_probs=25.5

Q ss_pred             CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       128 ~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            57999999999999988 678999999653

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.62  E-value=0.022  Score=54.36  Aligned_cols=140  Identities=24%  Similarity=0.338  Sum_probs=79.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVY   85 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~   85 (379)
                      ..++ +.|..|--..+|+......   +..|++|+.....-   .. -.-.+|..+++.+..-++ .++++++. .+   
T Consensus        16 ~i~i-~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~~-IdR~~E~~il~~l~~~gl~P~~l~~~~-~G---   86 (330)
T PLN02421         16 DFSV-ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD---YV-IDRERELQAIKYLSAAGFGAKLLGVFG-NG---   86 (330)
T ss_pred             ceEE-EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC---eE-echHHHHHHHHHHHhcCCCCceeEEeC-Cc---
Confidence            3444 4555588888998875432   34888998754321   11 123578888888865444 35565553 22   


Q ss_pred             EEEeccCCCChHH----------HHH------hcCC------C-CHHHHHHHHHHH----------------------HH
Q 016991           86 IILEFVTGGELFD----------KIV------HQGR------L-LENDCRRYFQQL----------------------ID  120 (379)
Q Consensus        86 lv~E~~~gg~L~~----------~l~------~~~~------l-~e~~~~~~~~qi----------------------l~  120 (379)
                      +|.+|++|..+..          .+.      +...      . ....+..++.++                      ..
T Consensus        87 ~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~  166 (330)
T PLN02421         87 MIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRD  166 (330)
T ss_pred             EeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHH
Confidence            4889987765421          111      0111      1 122233333222                      11


Q ss_pred             HHHHHH----HCC----ceeecCCCCcEEEcc-CCCeEEeeeccccC
Q 016991          121 AVAHCH----SKG----VYHRDLKPENLLLDS-YGNLKVSDFGLSAL  158 (379)
Q Consensus       121 ~l~ylH----~~g----i~HrDlkp~NIll~~-~~~lkl~DfGl~~~  158 (379)
                      -+..+.    +.+    ++|+|+.|.|||+++ ++.++++||..|..
T Consensus       167 ~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        167 EIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             HHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            122221    122    799999999999975 47899999998753

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=96.03  E-value=0.056  Score=50.47  Aligned_cols=74  Identities=18%  Similarity=0.187  Sum_probs=47.0

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEEEEe
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      -.+.++.|..+.+|...  .++..+.+|+-...      ....+..|..-|+.|.   --.+.+++.+....+.-|++||
T Consensus        21 ~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~------~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle   92 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLD--TDGGSYFVKVNSES------GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLE   92 (288)
T ss_dssp             EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGG------GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE
T ss_pred             eeEecCCCChhheEEEE--CCCccEEEEecChh------hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEE
Confidence            35678999999999887  56788999976521      1245677888887774   3457788888877777799999


Q ss_pred             ccCCC
Q 016991           90 FVTGG   94 (379)
Q Consensus        90 ~~~gg   94 (379)
                      |++.+
T Consensus        93 ~l~~~   97 (288)
T PF03881_consen   93 FLEMG   97 (288)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            99866

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PRK12396 5-methylribose kinase; Reviewed

Probab=95.98  E-value=0.063  Score=52.12  Aligned_cols=78  Identities=15%  Similarity=0.212  Sum_probs=50.1

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeeccc-c--cchHHHHHHHHHHHHHHhCC--CC-CcceEEEEEEeCCeEEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-I--LKHRMVDQIKREISIMKIVR--HP-NIVRLHEVLASRTKVYII   87 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~-~--~~~~~~~~~~~Ei~~l~~l~--hp-~Iv~l~~~~~~~~~~~lv   87 (379)
                      .+.||.|.-.-||++.+...+..|+||--...- +  .-.-..++..-|...|+...  -| ++.+++.+  +.....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            578999999999999985445678888542110 1  00123466777888888764  34 45556543  33445688


Q ss_pred             EeccCC
Q 016991           88 LEFVTG   93 (379)
Q Consensus        88 ~E~~~g   93 (379)
                      ||+++.
T Consensus       112 MEdL~~  117 (409)
T PRK12396        112 MEDLSD  117 (409)
T ss_pred             HHhCcc
Confidence            888864

>PTZ00384 choline kinase; Provisional

Probab=95.95  E-value=0.075  Score=51.72  Aligned_cols=78  Identities=18%  Similarity=0.264  Sum_probs=45.9

Q ss_pred             eeeeeeecccCCeEEEEEEECCC-CcE-----EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCe
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRET-GES-----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTK   83 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~-~~~-----vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~   83 (379)
                      .++ +.|..|-...+|++..... +..     |.+++....   .. ..-.-.+|+.+++.+...++ .++++.+..   
T Consensus        53 i~i-~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~---~~-l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~---  124 (383)
T PTZ00384         53 IEI-KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY---NS-LVIDNDLQYNIAKLLGDNNFGPKIIGRFGD---  124 (383)
T ss_pred             EEE-EEeCCcccceEEEEEecCCCCCccccceEEEEeccCC---Cc-eEeccHHHHHHHHHHHhCCCCCeEEEecCC---
Confidence            444 5565688899999875433 223     333332111   11 11123578999999875554 455666643   


Q ss_pred             EEEEEeccCCCChH
Q 016991           84 VYIILEFVTGGELF   97 (379)
Q Consensus        84 ~~lv~E~~~gg~L~   97 (379)
                       +++.||++|.+|.
T Consensus       125 -g~l~efIeGr~l~  137 (383)
T PTZ00384        125 -FTIQEWVEGNTMG  137 (383)
T ss_pred             -EEEEEEeccccCC
Confidence             5899999987653

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.94  E-value=0.029  Score=53.37  Aligned_cols=75  Identities=25%  Similarity=0.330  Sum_probs=57.5

Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      +..+.|++|++- |+.+. .+   .--...++..++.+.+..++-+... ..-|||+.-.||||+ +|++.|+||-+++.
T Consensus       297 e~~y~yl~~kdh-gt~is-~i---k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         297 ETLYLYLHFKDH-GTPIS-II---KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             CceEEEEEEecC-Cceee-ee---ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeec
Confidence            445677888874 55443 22   2234667888899988888888765 689999999999999 89999999999985


Q ss_pred             CC
Q 016991          159 PQ  160 (379)
Q Consensus       159 ~~  160 (379)
                      ..
T Consensus       371 ~~  372 (488)
T COG5072         371 SY  372 (488)
T ss_pred             cc
Confidence            43

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.79  E-value=0.039  Score=53.28  Aligned_cols=62  Identities=15%  Similarity=0.196  Sum_probs=42.3

Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHCCceeecCCCCcEEEccC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC-HSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~yl-H~~gi~HrDlkp~NIll~~~  145 (379)
                      ...++-+|..|.++..++.. ...+|.....++.--..|+--+ --.+++|.|+.|.||++--+
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~-~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKW-KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             cceeeeeccccccHHhhhhc-ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence            45566678889888877765 4455655555555445554433 34579999999999999543

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.65  E-value=0.39  Score=45.64  Aligned_cols=71  Identities=14%  Similarity=0.056  Sum_probs=42.0

Q ss_pred             cCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC--CcceEE---E--EEEeCCeEEEEEeccC
Q 016991           20 GTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP--NIVRLH---E--VLASRTKVYIILEFVT   92 (379)
Q Consensus        20 G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp--~Iv~l~---~--~~~~~~~~~lv~E~~~   92 (379)
                      +.-..||.... .+|..+++|+.+....    ....+..|+..+..|...  .++...   +  +...++..+.++++++
T Consensus        36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~----~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~  110 (325)
T PRK11768         36 SYENRVYQFGD-EDGRRVVAKFYRPERW----SDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRG  110 (325)
T ss_pred             cccceEEEEec-CCCCEEEEEEcCcccC----CHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeC
Confidence            34467888765 3567899998753321    235667788777666421  122211   1  2233567888999998


Q ss_pred             CCC
Q 016991           93 GGE   95 (379)
Q Consensus        93 gg~   95 (379)
                      |..
T Consensus       111 G~~  113 (325)
T PRK11768        111 GRA  113 (325)
T ss_pred             CCC
Confidence            754

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.49  E-value=0.58  Score=44.06  Aligned_cols=30  Identities=17%  Similarity=0.189  Sum_probs=27.3

Q ss_pred             CceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991          129 GVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus       129 gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      ++||+|+.+.|+|++.++.+-++||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            799999999999999999999999987653

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK10271 thiK thiamine kinase; Provisional

Probab=94.02  E-value=0.048  Score=47.32  Aligned_cols=32  Identities=22%  Similarity=0.343  Sum_probs=26.9

Q ss_pred             CceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991          129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus       129 gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      -.+|+|+.|.||+++++| ++|+||+.+...+.
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence            369999999999998877 99999998865443

>PTZ00296 choline kinase; Provisional

Probab=93.00  E-value=1.2  Score=44.38  Aligned_cols=75  Identities=17%  Similarity=0.193  Sum_probs=45.6

Q ss_pred             eeeecccCCeEEEEEEECCC--------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcc-eEEEEEEeCCeE
Q 016991           14 GRTIGEGTFAKVRFAQNRET--------GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV-RLHEVLASRTKV   84 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~--------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv-~l~~~~~~~~~~   84 (379)
                      ++.|..|--..+|++.....        ++.|.+++.-...   .... .-..|..+++.+...+|- ++++.+. +   
T Consensus       110 i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~t---e~lI-dR~~E~~v~~~ls~~gi~P~l~~~f~-g---  181 (442)
T PTZ00296        110 VNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDV---DELY-NPISEFEVYKTMSKYRIAPQLLNTFS-G---  181 (442)
T ss_pred             EEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCc---ccee-CHHHHHHHHHHHHHCCCCCceEEEeC-C---
Confidence            46676787888888875421        5678888874432   1122 234677777777654443 4555543 2   


Q ss_pred             EEEEeccCCCCh
Q 016991           85 YIILEFVTGGEL   96 (379)
Q Consensus        85 ~lv~E~~~gg~L   96 (379)
                      +.+.||++|..|
T Consensus       182 g~I~efi~g~~l  193 (442)
T PTZ00296        182 GRIEEWLYGDPL  193 (442)
T ss_pred             CEEEEeeCCccC
Confidence            357889887643

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=92.82  E-value=0.18  Score=46.58  Aligned_cols=31  Identities=39%  Similarity=0.550  Sum_probs=28.0

Q ss_pred             CceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991          129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus       129 gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      -++|+|+.|+|++.++.|.++|+||..|...
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~  184 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGLN  184 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCCc
Confidence            4899999999999999999999999987643

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.63  E-value=1.5  Score=39.43  Aligned_cols=74  Identities=16%  Similarity=0.293  Sum_probs=49.5

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEEEEecc
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKVYIILEFV   91 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~~lv~E~~   91 (379)
                      +.+..|.--..|...+  ...+|-+|+-.      .+....+..|+.-|+.+.   .-.+.+++.+-.+.++.|+||||+
T Consensus        22 ~~v~gG~inea~~v~d--g~~~~FvK~n~------~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L   93 (286)
T COG3001          22 EEVSGGDINEAWRLRD--GTDPFFVKCNQ------REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYL   93 (286)
T ss_pred             cccCCccccceeEeec--CCcceEEEecc------hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeec
Confidence            3455555555565544  24577788533      224456777877776664   455777888888999999999999


Q ss_pred             CCCCh
Q 016991           92 TGGEL   96 (379)
Q Consensus        92 ~gg~L   96 (379)
                      +-+.+
T Consensus        94 ~~~~~   98 (286)
T COG3001          94 PTGPL   98 (286)
T ss_pred             cCCCC
Confidence            86443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	379
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		4e-69
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-69
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-68
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-67
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-67
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		3e-67
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		3e-67
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		8e-67
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-64
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-58
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-58
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-58
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-58
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		7e-58
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-58
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		1e-57
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-57
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-56
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-55
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		8e-52
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-51
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-51
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-51
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-51
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		5e-51
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		5e-51
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		8e-51
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		8e-51
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		9e-51
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-50
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-50
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-49
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		7e-49
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		9e-49
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		1e-48
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-48
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-48
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-48
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-48
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-48
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-48
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-48
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		2e-48
3soa_A	444	Full-Length Human Camkii Length = 444		3e-48
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		4e-48
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		4e-48
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-48
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		5e-48
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		5e-48
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-48
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-48
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		5e-48
3kk8_A	284	Camkii Substrate Complex A Length = 284		5e-48
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-48
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-48
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		7e-48
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		9e-48
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-47
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-47
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		3e-47
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		4e-47
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		4e-47
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-47
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		6e-47
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-47
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		6e-47
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-47
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-47
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		6e-47
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		7e-47
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		7e-47
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		7e-47
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		7e-47
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-47
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		7e-47
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		8e-47
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		8e-47
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		8e-47
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		8e-47
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		8e-47
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		8e-47
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-46
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-46
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-46
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-46
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-46
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		1e-46
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-46
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-46
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-46
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		7e-46
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		8e-46
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		9e-46
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		9e-46
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-45
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-45
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-45
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-45
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-45
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-44
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-44
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-44
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-44
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-44
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-44
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		6e-44
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		7e-44
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		7e-44
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		7e-44
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		8e-44
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		9e-44
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		1e-43
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-42
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-42
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-42
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-42
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		4e-42
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		5e-42
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-42
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-42
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		7e-42
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-42
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		7e-42
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-42
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		8e-42
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-41
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-41
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-41
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-41
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-41
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-41
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-41
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-41
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-41
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-41
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-41
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		5e-41
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		6e-41
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		6e-41
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		7e-41
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		8e-41
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		9e-41
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		9e-41
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		9e-41
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		9e-41
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		9e-41
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		1e-40
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-40
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-40
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-40
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		1e-40
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-40
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-40
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-40
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-40
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-40
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-40
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-40
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		1e-40
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-40
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-40
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-40
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-40
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-40
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-40
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-40
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		2e-40
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-40
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-40
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-40
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-40
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		2e-40
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-40
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-40
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-40
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-40
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-40
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-40
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-40
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-40
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		3e-40
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-40
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-40
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-40
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-40
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		3e-40
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-40
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-40
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		4e-40
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		4e-40
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		5e-40
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		6e-40
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-40
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		8e-40
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		8e-40
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-40
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		9e-40
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-39
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-39
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-39
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-39
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		3e-39
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-39
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		1e-38
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-38
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-38
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-38
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-38
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-38
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		4e-38
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		6e-38
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		7e-38
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		7e-38
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		8e-38
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		8e-38
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		8e-38
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		9e-38
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		1e-37
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-37
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		1e-37
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-37
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-37
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		2e-37
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-37
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		2e-37
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-37
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		5e-37
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		6e-37
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		6e-37
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		7e-37
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		8e-37
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-37
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		7e-36
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		7e-36
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-35
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-35
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-35
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-35
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		4e-35
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-35
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		4e-35
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		7e-35
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-35
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		7e-35
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		7e-35
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		9e-35
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-34
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-34
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-34
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-34
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-34
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-34
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-34
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-34
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-34
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-34
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-34
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-34
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-34
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-34
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-34
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-34
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		5e-34
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		5e-34
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		7e-34
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		7e-34
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-34
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		8e-34
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		9e-34
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-33
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		2e-33
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-33
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-33
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-32
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-32
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-32
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-31
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-31
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-31
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		2e-31
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-31
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		4e-31
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-30
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		2e-30
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		8e-30
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-29
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		7e-29
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		8e-29
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		9e-29
2oza_A	356	Structure Of P38alpha Complex Length = 356		9e-29
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-28
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-28
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		1e-28
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-28
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-28
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-28
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		1e-28
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-28
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-28
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		4e-28
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		4e-28
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		5e-28
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		6e-28
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		6e-28
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-28
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-28
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-27
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-27
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-27
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-27
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-27
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-27
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-27
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		3e-27
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		3e-27
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		3e-27
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		4e-27
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-27
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-27
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-27
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-27
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-27
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-27
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-27
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-27
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-27
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-27
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		4e-27
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		4e-27
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		5e-27
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-27
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		5e-27
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-27
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-27
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		6e-27
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		6e-27
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		8e-27
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-27
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-26
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-26
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-26
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-26
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-26
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-26
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-26
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		5e-26
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-25
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-25
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-25
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-25
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-25
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		2e-25
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-25
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-25
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-25
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-25
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-25
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-25
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-24
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-24
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-24
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-24
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		1e-24
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		1e-24
2ehb_D	143	The Structure Of The C-Terminal Domain Of The Prote		2e-24
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-24
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-24
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		3e-24
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		4e-24
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		5e-24
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		5e-24
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		5e-24
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		5e-24
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		5e-24
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		6e-24
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		6e-24
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-24
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-24
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		6e-24
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		7e-24
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		7e-24
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-24
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		7e-24
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		8e-24
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		8e-24
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-24
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		8e-24
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-24
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		9e-24
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		9e-24
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		9e-24
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		9e-24
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		9e-24
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		1e-23
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-23
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-23
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-23
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		1e-23
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-23
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-23
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-23
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-23
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		5e-23
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		6e-23
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		7e-23
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		7e-23
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		8e-23
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-22
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-22
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-22
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		3e-22
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		5e-22
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-22
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-22
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		6e-22
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-22
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		7e-22
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-22
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		9e-22
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-21
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-21
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-21
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-21
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-21
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-20
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-20
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		2e-20
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-20
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		4e-20
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		5e-20
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-20
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-20
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-20
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		7e-20
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-20
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-19
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-19
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-19
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		1e-19
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-19
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		2e-19
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-19
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		4e-19
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		5e-19
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		5e-19
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		6e-19
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		9e-19
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-18
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		1e-18
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-18
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-18
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-18
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-18
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-18
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-18
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-18
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-18
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		2e-18
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-18
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-18
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-18
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		2e-18
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-18
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		2e-18
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-18
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		2e-18
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		2e-18
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-18
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-18
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-18
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		3e-18
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-18
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-18
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		3e-18
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-18
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		3e-18
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-18
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		3e-18
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-18
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-18
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-18
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-18
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		4e-18
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		4e-18
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		4e-18
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-18
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-18
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		5e-18
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		5e-18
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		5e-18
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		5e-18
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		5e-18
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		5e-18
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		5e-18
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		6e-18
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		6e-18
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-18
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-18
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-18
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		6e-18
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-18
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		7e-18
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		8e-18
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		8e-18
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		8e-18
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		9e-18
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		9e-18
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		9e-18
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		9e-18
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		9e-18
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		9e-18
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		9e-18
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-17
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-17
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-17
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-17
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		2e-17
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-17
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-17
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-17
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-17
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-17
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		2e-17
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-17
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-17
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		3e-17
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-17
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-17
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-17
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		4e-17
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-17
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		5e-17
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-17
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		5e-17
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-17
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		6e-17
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		6e-17
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		6e-17
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		6e-17
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		6e-17
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-17
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		6e-17
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		7e-17
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		7e-17
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		8e-17
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		8e-17
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		8e-17
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		8e-17
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		8e-17
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		9e-17
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		9e-17
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		9e-17
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		9e-17
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		9e-17
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-16
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		1e-16
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-16
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-16
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		1e-16
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-16
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-16
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-16
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-16
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-16
2oza_B	366	Structure Of P38alpha Complex Length = 366		1e-16
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-16
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-16
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-16
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-16
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-16
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-16
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-16
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-16
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-16
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-16
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-16
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		1e-16
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-16
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-16
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-16
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-16
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-16
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-16
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-16
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-16
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		2e-16
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-16
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-16
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-16
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-16
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-16
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-16
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-16
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-16
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-16
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-16
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-16
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-16
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-16
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		2e-16
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-16
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-16
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-16
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-16
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-16
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-16
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-16
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-16
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-16
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-16
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-16
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-16
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-16
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-16
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-16
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-16
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		2e-16
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		2e-16
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-16
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		2e-16
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-16
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-16
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-16
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-16
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-16
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-16
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-16
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-16
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-16
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-16
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		3e-16
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-16
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		3e-16
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		3e-16
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-16
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-16
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		3e-16
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		3e-16
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		3e-16
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		3e-16
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-16
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		3e-16
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-16
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		3e-16
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		3e-16
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-16
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		3e-16
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		3e-16
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-16
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-16
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		3e-16
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		3e-16
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		3e-16
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-16
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		4e-16
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-16
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		4e-16
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-16
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		4e-16
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-16
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		4e-16
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		4e-16
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		4e-16
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		4e-16
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		4e-16
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-16
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-16
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-16
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-16
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		5e-16
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		6e-16
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		6e-16
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		7e-16
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		7e-16
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		8e-16
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		9e-16
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-15
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-15
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-15
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-15
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		1e-15
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-15
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-15
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-15
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-15
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-15
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		2e-15
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-15
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-15
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-15
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-15
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-15
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-15
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-15
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-15
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-15
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-15
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-15
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-15
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		3e-15
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		5e-15
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		5e-15
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		5e-15
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-15
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		6e-15
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		6e-15
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-15
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		7e-15
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		7e-15
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		8e-15
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		8e-15
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-15
4exu_A	371	Mapk13, Inactive Form Length = 371		9e-15
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-14
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-14
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-14
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-14
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-14
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-14
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-14
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-14
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		1e-14
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-14
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-14
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		1e-14
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-14
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		2e-14
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-14
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-14
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		4e-14
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		4e-14
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-14
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		7e-14
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		8e-14
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		8e-14
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-14
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		9e-14
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		9e-14
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-13
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-13
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-13
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		1e-13
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-13
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-13
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-13
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-13
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-13
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-13
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-13
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-13
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-13
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-13
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-13
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-13
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-13
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-13
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		3e-13
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-13
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-13
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-13
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-13
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-13
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-13
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-13
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		5e-13
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		5e-13
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-13
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		6e-13
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		7e-13
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		8e-13
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		8e-13
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		8e-13
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		9e-13
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		9e-13
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		9e-13
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-12
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-12
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-12
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-12
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		1e-12
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-12
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		2e-12
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-12
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-12
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-12
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-12
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-12
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-12
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-12
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-12
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-12
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-12
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-12
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-12
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-12
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-12
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-12
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		2e-12
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-12
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-12
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		3e-12
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-12
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-12
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-12
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		3e-12
2pl0_A	289	Lck Bound To Imatinib Length = 289		3e-12
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-12
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-12
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		3e-12
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-12
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-12
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-12
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		4e-12
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		4e-12
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		4e-12
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		4e-12
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-12
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		5e-12
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-12
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		5e-12
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		5e-12
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		5e-12
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		6e-12
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		6e-12
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-12
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		7e-12
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		7e-12
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		7e-12
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		8e-12
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		8e-12
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		8e-12
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		8e-12
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		8e-12
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		8e-12
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		8e-12
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		8e-12
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		9e-12
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		9e-12
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		9e-12
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-11
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-11
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		1e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-11
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-11
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-11
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-11
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-11
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-11
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		2e-11
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-11
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-11
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-11
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-11
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-11
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-11
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		2e-11
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-11
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		3e-11
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-11
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		3e-11
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		3e-11
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		3e-11
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-11
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		3e-11
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		3e-11
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		3e-11
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		3e-11
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		3e-11
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-11
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		3e-11
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		3e-11
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-11
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		3e-11
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		4e-11
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		4e-11
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		4e-11
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-11
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		4e-11
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		5e-11
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		5e-11
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		6e-11
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-11
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-11
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-11
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-11
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		6e-11
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-10
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		1e-10
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-10
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		2e-10
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		2e-10
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-10
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		3e-10
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		3e-10
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		3e-10
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		4e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-10
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		4e-10
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-10
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		5e-10
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		5e-10
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-10
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-10
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		7e-10
3gni_B	389	Structure Of Strad And Mo25 Length = 389		7e-10
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		7e-10
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		8e-10
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		8e-10
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-09
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-09
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-09
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-09
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-09
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-09
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-09
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-09
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-09
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		2e-09
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-09
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-09
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-09
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-09
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-09
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-09
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		3e-09
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		4e-09
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		4e-09
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		5e-09
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		5e-09
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-09
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		5e-09
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		5e-09
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		5e-09
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		6e-09
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		6e-09
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		6e-09
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		7e-09
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		7e-09
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-08
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-08
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-08
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-08
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-08
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		1e-08
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-08
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-08
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-08
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		1e-08
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		1e-08
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		1e-08
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-08
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		1e-08
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		1e-08
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		1e-08
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		1e-08
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		1e-08
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-08
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-08
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-08
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-08
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-08
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-08
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		2e-08
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		2e-08
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		2e-08
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-08
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-08
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-08
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-08
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		2e-08
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-08
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		2e-08
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		2e-08
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-08
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-08
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		3e-08
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-08
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-08
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		3e-08
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-08
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		3e-08
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		4e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		4e-08
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		4e-08
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-08
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		4e-08
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		4e-08
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		4e-08
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		4e-08
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		5e-08
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		5e-08

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 118/261 (45%), Positives = 178/261 (68%), Gaps = 1/261 (0%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++  Y +G T+G GTF KV+  +++ TG  VA+K+L +  I    +V +IKREI  +K+ 
Sbjct: 9   KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           RHP+I++L++V+++ T  ++++E+V+GGELFD I   GR+ E + RR FQQ++ AV +CH
Sbjct: 69  RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
              V HRDLKPEN+LLD++ N K++DFGLS +   G E L T+CG+PNY APEV+S R Y
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLY 187
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            G   D+WSCGVIL+ L+ G LPF +  +PTL+KKI    F  P + +    +L+  +L 
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 247
Query: 247 PNPKTRIRIEGIRKHPWFRKN 267
            +P  R  I+ IR+H WF+++
Sbjct: 248 VDPLKRATIKDIREHEWFKQD 268

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  258 bits (658), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 122/305 (40%), Positives = 196/305 (64%), Gaps = 15/305 (4%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M    R +  Y +  T+GEG+F KV+ A + +T + VA+K +++  + K  M  +++REI
Sbjct: 1   MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           S +K++RHP+I++L++V+ + T + +++E+  GGELFD IV + R+ E++ RR+FQQ+I 
Sbjct: 61  SYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIIC 119
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+ +CH   + HRDLKPENLLLD   N+K++DFGLS +   G   L T+CG+PNY APEV
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEV 178
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           ++ + Y G   DVWSCG++L+V++ G LPF +  +P L+KK+N+  +  P + S GA SL
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSL 238
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYVAEQS 300
           I +++  +P  RI I+ IR+ PWF              VNL D     ++++  Y   + 
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWF-------------NVNLPDYLRPMEEVQGSYADSRI 285
Query: 301 ENKVG 305
            +K+G
Sbjct: 286 VSKLG 290

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 117/261 (44%), Positives = 177/261 (67%), Gaps = 1/261 (0%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++  Y +G T+G GTF KV+  +++ TG  VA+K+L +  I    +V +IKREI  +K+ 
Sbjct: 9   KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           RHP+I++L++V+++ T  ++++E+V+GGELFD I   GR+ E + RR FQQ++ AV +CH
Sbjct: 69  RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
              V HRDLKPEN+LLD++ N K++DFGLS +   G E L  +CG+PNY APEV+S R Y
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRDSCGSPNYAAPEVISGRLY 187
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            G   D+WSCGVIL+ L+ G LPF +  +PTL+KKI    F  P + +    +L+  +L 
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQ 247
Query: 247 PNPKTRIRIEGIRKHPWFRKN 267
            +P  R  I+ IR+H WF+++
Sbjct: 248 VDPLKRATIKDIREHEWFKQD 268

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 177/258 (68%), Gaps = 2/258 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y++ +T+GEG+F KV+ A +  TG+ VA+K++ K  + K  M  +I+REIS ++++R
Sbjct: 12  IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HP+I++L++V+ S+ ++ +++E+  G ELFD IV + ++ E + RR+FQQ+I AV +CH 
Sbjct: 72  HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HRDLKPENLLLD + N+K++DFGLS +   G   L T+CG+PNY APEV+S + Y 
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLYA 189
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWSCGVIL+V++   LPF +  +P L+K I+   ++ P + S GA  LI ++L  
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 248 NPKTRIRIEGIRKHPWFR 265
           NP  RI I  I +  WF+
Sbjct: 250 NPLNRISIHEIMQDDWFK 267

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 177/258 (68%), Gaps = 2/258 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y++ +T+GEG+F KV+ A +  TG+ VA+K++ K  + K  M  +I+REIS ++++R
Sbjct: 13  IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HP+I++L++V+ S+ ++ +++E+  G ELFD IV + ++ E + RR+FQQ+I AV +CH 
Sbjct: 73  HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HRDLKPENLLLD + N+K++DFGLS +   G   L T+CG+PNY APEV+S + Y 
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLYA 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWSCGVIL+V++   LPF +  +P L+K I+   ++ P + S GA  LI ++L  
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
Query: 248 NPKTRIRIEGIRKHPWFR 265
           NP  RI I  I +  WF+
Sbjct: 251 NPLNRISIHEIMQDDWFK 268

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 177/258 (68%), Gaps = 2/258 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y++ +T+GEG+F KV+ A +  TG+ VA+K++ K  + K  M  +I+REIS ++++R
Sbjct: 3   IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HP+I++L++V+ S+ ++ +++E+  G ELFD IV + ++ E + RR+FQQ+I AV +CH 
Sbjct: 63  HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HRDLKPENLLLD + N+K++DFGLS +   G   L T+CG+PNY APEV+S + Y 
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLYA 180
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWSCGVIL+V++   LPF +  +P L+K I+   ++ P + S GA  LI ++L  
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 248 NPKTRIRIEGIRKHPWFR 265
           NP  RI I  I +  WF+
Sbjct: 241 NPLNRISIHEIMQDDWFK 258

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 114/258 (44%), Positives = 177/258 (68%), Gaps = 2/258 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y++ +T+GEG+F KV+ A +  TG+ VA+K++ K  + K  M  +I+REIS ++++R
Sbjct: 7   IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HP+I++L++V+ S+ ++ +++E+  G ELFD IV + ++ E + RR+FQQ+I AV +CH 
Sbjct: 67  HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HRDLKPENLLLD + N+K++DFGLS +   G   L T+CG+PNY APEV+S + Y 
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEVISGKLYA 184
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWSCGVIL+V++   LPF +  +P L+K I+   ++ P + S GA  LI ++L  
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
Query: 248 NPKTRIRIEGIRKHPWFR 265
           NP  RI I  I +  WF+
Sbjct: 245 NPLNRISIHEIMQDDWFK 262

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  250 bits (639), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 115/261 (44%), Positives = 175/261 (67%), Gaps = 1/261 (0%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++  Y +G T+G GTF KV+  ++  TG  VA+K+L +  I    +V +I+REI  +K+ 
Sbjct: 14  KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF 73
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           RHP+I++L++V+++ + +++++E+V+GGELFD I   GRL E + RR FQQ++  V +CH
Sbjct: 74  RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 133
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
              V HRDLKPEN+LLD++ N K++DFGLS +   G E L  +CG+PNY APEV+S R Y
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRXSCGSPNYAAPEVISGRLY 192
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            G   D+WS GVIL+ L+ G LPF +  +PTL+KKI    F  P + +    SL+  +L 
Sbjct: 193 AGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQ 252
Query: 247 PNPKTRIRIEGIRKHPWFRKN 267
            +P  R  I+ IR+H WF+++
Sbjct: 253 VDPMKRATIKDIREHEWFKQD 273

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 174/278 (62%), Gaps = 4/278 (1%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG  VA+K++ K T L    + ++ RE+ IMKI+ 
Sbjct: 11  IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILN 69
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+I+E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 70  HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L T CG+P Y APE+   + YD
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDTFCGSPPYAAPELFQGKKYD 188
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ + L  
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL 248
Query: 248 NPKTRIRIEGIRKHPWFRKNY--NPVKCSEEEEVNLDD 283
           NP  R  +E I K  W    +  + +K   E E+++ D
Sbjct: 249 NPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 286

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 165/256 (64%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA+K++ K T L    + ++ RE+ IMK++ 
Sbjct: 13  IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLN 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L T CG+P Y APE+   + YD
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYD 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 251 NPSKRGTLEQIMKDRW 266

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 165/256 (64%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA+K++ K T L    + ++ RE+ IMK++ 
Sbjct: 13  IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLN 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L T CG+P Y APE+   + YD
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYD 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 251 NPSKRGTLEQIMKDRW 266

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 165/256 (64%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA++++ K T L    + ++ RE+ IMK++ 
Sbjct: 13  IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDK-TQLNSSSLQKLFREVRIMKVLN 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L T CG+P Y APE+   + YD
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYD 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 251 NPSKRGTLEQIMKDRW 266

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  221 bits (562), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 113/278 (40%), Positives = 172/278 (61%), Gaps = 4/278 (1%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG  VA+K++ K T L    + ++ RE+ IMKI+ 
Sbjct: 14  IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDK-TQLNPTSLQKLFREVRIMKILN 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+I+E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 73  HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L   CG P Y APE+   + YD
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-LDAFCGAPPYAAPELFQGKKYD 191
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ + L  
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKRFLVL 251
Query: 248 NPKTRIRIEGIRKHPWFRKNY--NPVKCSEEEEVNLDD 283
           NP  R  +E I K  W    +  + +K   E E+++ D
Sbjct: 252 NPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 289

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  220 bits (561), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 163/256 (63%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA+K++ K T L    + ++ RE+ IMK++ 
Sbjct: 13  IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLN 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L   CG P Y APE+   + YD
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPELFQGKKYD 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 251 NPSKRGTLEQIMKDRW 266

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 164/256 (64%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA+K++ K T L    + ++ RE+ IMK++ 
Sbjct: 6   IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIMKVLN 64
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  G + E + R  F+Q++ AV +CH 
Sbjct: 65  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L T CG+P Y APE+   + YD
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDTFCGSPPYAAPELFQGKKYD 183
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 243
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 244 NPSKRGTLEQIMKDRW 259

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  219 bits (559), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 107/256 (41%), Positives = 164/256 (64%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA++++ K T L    + ++ RE+ IMK++ 
Sbjct: 13  IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDK-TQLNSSSLQKLFREVRIMKVLN 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L   CG+P Y APE+   + YD
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDEFCGSPPYAAPELFQGKKYD 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKFLIL 250
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 251 NPSKRGTLEQIMKDRW 266

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  214 bits (546), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/256 (41%), Positives = 160/256 (62%), Gaps = 2/256 (0%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG+ VA+K++ K T L    + ++ RE+ I K++ 
Sbjct: 13  IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK-TQLNSSSLQKLFREVRIXKVLN 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y++ E+ +GGE+FD +V  GR  E + R  F+Q++ AV +CH 
Sbjct: 72  HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD+  N+K++DFG S     G + L   CG P Y APE+   + YD
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPELFQGKKYD 190
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K L  
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLIL 250
Query: 248 NPKTRIRIEGIRKHPW 263
           NP  R  +E I K  W
Sbjct: 251 NPSKRGTLEQIXKDRW 266

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score =  213 bits (541), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 114/272 (41%), Positives = 170/272 (62%), Gaps = 8/272 (2%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  Y + +TIG+G FAKV+ A++  TG  VA+K++ K T L    + ++ RE+ IMKI+ 
Sbjct: 14  IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDK-TQLNPTSLQKLFREVRIMKILN 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNIV+L EV+ +   +Y+++E+ +GGE+FD +V  GR+ E + R  F+Q++ AV +CH 
Sbjct: 73  HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K + HRDLK ENLLLD   N+K++DFG S     G + L T CG+P Y APE+   + YD
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK-LDTFCGSPPYAAPELFQGKKYD 191
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           G   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L+ K+L  
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKKLLVL 251
Query: 248 NPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
           NP  R  +E I K  W    +      EEEE+
Sbjct: 252 NPIKRGSLEQIMKDRWMNVGH------EEEEL 277

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score =  201 bits (510), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 160/270 (59%), Gaps = 21/270 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+ + IG G F   R  +++++ E VA+K + +      ++ + +KREI   + +RHP
Sbjct: 19  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----EKIDENVKREIINHRSLRHP 74
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVR  EV+ + T + I++E+ +GGELF++I + GR  E++ R +FQQLI  V++CH+  
Sbjct: 75  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 134
Query: 130 VYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQGVELLH----TTCGTPNYVAPEVLSN 183
           V HRDLK EN LLD      LK+ DFG S        +LH    +T GTP Y+APEVL  
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLK 189
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCPFW--FSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  ++K    I   +++ P +   S   
Sbjct: 190 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 249
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI +I   +P  RI I  IR H WF KN
Sbjct: 250 RHLISRIFVADPAKRISIPEIRNHEWFLKN 279

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score =  200 bits (509), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 159/270 (58%), Gaps = 21/270 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+ + IG G F   R  +++++ E VA+K + +      ++   +KREI   + +RHP
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----EKIAANVKREIINHRSLRHP 75
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVR  EV+ + T + I++E+ +GGELF++I + GR  E++ R +FQQLI  V++CH+  
Sbjct: 76  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQGVELLH----TTCGTPNYVAPEVLSN 183
           V HRDLK EN LLD      LK+ DFG S        +LH    +T GTP Y+APEVL  
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCPFW--FSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  ++K    I   +++ P +   S   
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI +I   +P  RI I  IR H WF KN
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 103/270 (38%), Positives = 159/270 (58%), Gaps = 12/270 (4%)
Query: 2   KKQTRRVAK-YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           KKQ   + K +E   T+G G F++V  A+ + TG+  A+K + K  +        I+ EI
Sbjct: 14  KKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEI 71
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           ++++ ++H NIV L ++  S   +Y++++ V+GGELFD+IV +G   E D     +Q++D
Sbjct: 72  AVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 121 AVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
           AV + H  G+ HRDLKPENLL    D    + +SDFGLS +  +G +++ T CGTP YVA
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKG-DVMSTACGTPGYVA 190
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
           PEVL+ + Y   A D WS GVI ++L+ GY PF + +   L+++I  A  EF  P+W   
Sbjct: 191 PEVLAQKPY-SKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI 249
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPW 263
           S  A   I  +++ +P  R   E   +HPW
Sbjct: 250 SDSAKDFIRNLMEKDPNKRYTCEQAARHPW 279

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 155/260 (59%), Gaps = 11/260 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y+    +G G F++V  A+++ T + VA+K +AK  +        ++ EI+++  ++HPN
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV L ++  S   +Y+I++ V+GGELFD+IV +G   E D  R   Q++DAV + H  G+
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPENLL   LD    + +SDFGLS +   G  +L T CGTP YVAPEVL+ + Y 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKPY- 195
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIHK 243
             A D WS GVI ++L+ GY PF + +   L+++I  A  EF  P+W   S  A   I  
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 244 ILDPNPKTRIRIEGIRKHPW 263
           +++ +P+ R   E   +HPW
Sbjct: 256 LMEKDPEKRFTCEQALQHPW 275

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  198 bits (503), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 155/260 (59%), Gaps = 11/260 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y+    +G G F++V  A+++ T + VA+K +AK  +        ++ EI+++  ++HPN
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV L ++  S   +Y+I++ V+GGELFD+IV +G   E D  R   Q++DAV + H  G+
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPENLL   LD    + +SDFGLS +   G  +L T CGTP YVAPEVL+ + Y 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKPY- 195
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIHK 243
             A D WS GVI ++L+ GY PF + +   L+++I  A  EF  P+W   S  A   I  
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 244 ILDPNPKTRIRIEGIRKHPW 263
           +++ +P+ R   E   +HPW
Sbjct: 256 LMEKDPEKRFTCEQALQHPW 275

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  198 bits (503), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 155/260 (59%), Gaps = 11/260 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y+    +G G F++V  A+++ T + VA+K +AK  +        ++ EI+++  ++HPN
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV L ++  S   +Y+I++ V+GGELFD+IV +G   E D  R   Q++DAV + H  G+
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPENLL   LD    + +SDFGLS +   G  +L T CGTP YVAPEVL+ + Y 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKPY- 195
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIHK 243
             A D WS GVI ++L+ GY PF + +   L+++I  A  EF  P+W   S  A   I  
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 244 ILDPNPKTRIRIEGIRKHPW 263
           +++ +P+ R   E   +HPW
Sbjct: 256 LMEKDPEKRFTCEQALQHPW 275

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score =  198 bits (503), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 158/270 (58%), Gaps = 21/270 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + IG G F   R  +++ T E VA+K + +   +     + ++REI   + +RHP
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHP 76
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVR  EV+ + T + II+E+ +GGEL+++I + GR  E++ R +FQQL+  V++CHS  
Sbjct: 77  NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ 136
Query: 130 VYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQGVELLH----TTCGTPNYVAPEVLSN 183
           + HRDLK EN LLD      LK+ DFG S        +LH    +T GTP Y+APEVL  
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLR 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCP--FWFSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  Y+K    I + ++S P     S   
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI +I   +P TRI I  I+ H WF KN
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWFLKN 281

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score =  197 bits (501), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/270 (40%), Positives = 159/270 (58%), Gaps = 21/270 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+ + IG G F   R  +++++ E VA+K + +      ++ + +KREI   + +RHP
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----EKIDENVKREIINHRSLRHP 75
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVR  EV+ + T + I++E+ +GGELF++I + GR  E++ R +FQQLI  V++CH+  
Sbjct: 76  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQGVELLHT----TCGTPNYVAPEVLSN 183
           V HRDLK EN LLD      LK+  FG S        +LH+    T GTP Y+APEVL  
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKDTVGTPAYIAPEVLLK 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCPFW--FSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  ++K    I   +++ P +   S   
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI +I   +P  RI I  IR H WF KN
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score =  197 bits (501), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/270 (40%), Positives = 159/270 (58%), Gaps = 21/270 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+ + IG G F   R  +++++ E VA+K + +      ++ + +KREI   + +RHP
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG----EKIDENVKREIINHRSLRHP 75
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVR  EV+ + T + I++E+ +GGELF++I + GR  E++ R +FQQLI  V++CH+  
Sbjct: 76  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQ 135
Query: 130 VYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQGVELLH----TTCGTPNYVAPEVLSN 183
           V HRDLK EN LLD      LK+  FG S        +LH    +T GTP Y+APEVL  
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSK-----SSVLHSQPKSTVGTPAYIAPEVLLK 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCPFW--FSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  ++K    I   +++ P +   S   
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI +I   +P  RI I  IR H WF KN
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  197 bits (501), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 155/260 (59%), Gaps = 11/260 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y+    +G G F++V  A+++ T + VA+K +AK  +        ++ EI+++  ++HPN
Sbjct: 20  YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHPN 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV L ++  S   +Y+I++ V+GGELFD+IV +G   E D  R   Q++DAV + H  G+
Sbjct: 78  IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 131 YHRDLKPENLL---LDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPENLL   LD    + +SDFGLS +   G  +L T CGTP YVAPEVL+ + Y 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKPY- 195
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIHK 243
             A D WS GVI ++L+ GY PF + +   L+++I  A  EF  P+W   S  A   I  
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 244 ILDPNPKTRIRIEGIRKHPW 263
           +++ +P+ R   E   +HPW
Sbjct: 256 LMEKDPEKRFTCEQALQHPW 275

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score =  196 bits (499), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/270 (39%), Positives = 158/270 (58%), Gaps = 21/270 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+ + IG G F   R  ++++  E VA+K + +      ++ + +KREI   + +RHP
Sbjct: 20  RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG----EKIDENVKREIINHRSLRHP 75
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVR  EV+ + T + I++E+ +GGELF++I + GR  E++ R +FQQLI  V++ H+  
Sbjct: 76  NIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQ 135
Query: 130 VYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGVELLH----TTCGTPNYVAPEVLSN 183
           V HRDLK EN LLD      LK++DFG S        +LH    +  GTP Y+APEVL  
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSK-----ASVLHSQPKSAVGTPAYIAPEVLLK 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCPFW--FSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  ++K    I   +++ P +   S   
Sbjct: 191 KEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPEC 250
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI +I   +P  RI I  IR H WF KN
Sbjct: 251 RHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score =  195 bits (496), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 101/258 (39%), Positives = 147/258 (56%), Gaps = 13/258 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G F++V   + R TG+  A+K + KS   +      ++ EI+++K ++H NIV L +
Sbjct: 17  LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRD---SSLENEIAVLKKIKHENIVTLED 73
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
           +  S T  Y++++ V+GGELFD+I+ +G   E D     QQ++ AV + H  G+ HRDLK
Sbjct: 74  IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 137 PENLLL---DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           PENLL    +    + ++DFGLS + Q G+  + T CGTP YVAPEVL+ + Y   A D 
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTACGTPGYVAPEVLAQKPY-SKAVDC 190
Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIHKILDPNP 249
           WS GVI ++L+ GY PF E     L++KI     EF  PFW   S  A   I  +L+ +P
Sbjct: 191 WSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 250
Query: 250 KTRIRIEGIRKHPWFRKN 267
             R   E    HPW   N
Sbjct: 251 NERYTCEKALSHPWIDGN 268

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 159/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   GE++ ++    +  E     Y  +L +A
Sbjct: 66  IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMI 183
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 184 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 282

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  191 bits (484), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 106/276 (38%), Positives = 153/276 (55%), Gaps = 9/276 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y++   +G+G F+ VR       G+  A K++  +  L  R   +++RE  I ++++HPN
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKII-NTKKLSARDHQKLEREARICRLLKHPN 82
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IVRLH+ ++     Y+I + VTGGELF+ IV +    E D     QQ+++AV HCH  GV
Sbjct: 83  IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 131 YHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPENLLL S      +K++DFGL+   +   +      GTP Y++PEVL    Y 
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY- 201
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIHK 243
           G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   +  A  LI+K
Sbjct: 202 GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINK 261
Query: 244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
           +L  NP  RI      KHPW         C   +E 
Sbjct: 262 MLTINPSKRITAAEALKHPWISHRSTVASCMHRQET 297

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  191 bits (484), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 9/261 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++   +G+G F+ VR      TG+  A K++  +  L  R   +++RE  I ++++HP
Sbjct: 5   EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKII-NTKKLSARDHQKLEREARICRLLKHP 63
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVRLH+ ++     Y++ + VTGGELF+ IV +    E D     QQ++++V HCH  G
Sbjct: 64  NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 130 VYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL S      +K++DFGL+   Q   +      GTP Y++PEVL    Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIH 242
            G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   +  A  LI+
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 243 KILDPNPKTRIRIEGIRKHPW 263
           K+L  NP  RI      KHPW
Sbjct: 243 KMLTINPAKRITASEALKHPW 263

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 152/261 (58%), Gaps = 9/261 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++   +G+G F+ VR      TG+  A K++  +  L  R   +++RE  I ++++HP
Sbjct: 5   EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKII-NTKKLSARDHQKLEREARICRLLKHP 63
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVRLH+ ++     Y++ + VTGGELF+ IV +    E D     QQ++++V HCH  G
Sbjct: 64  NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNG 123
Query: 130 VYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL S      +K++DFGL+   Q   +      GTP Y++PEVL    Y
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIH 242
            G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   +  A  LI+
Sbjct: 184 -GKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 243 KILDPNPKTRIRIEGIRKHPW 263
           K+L  NP  RI      KHPW
Sbjct: 243 KMLTINPAKRITASEALKHPW 263

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 18  KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 78  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMI 195
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 196 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 254
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 294

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score =  189 bits (481), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 66  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMI 183
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 184 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 282

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/271 (38%), Positives = 155/271 (57%), Gaps = 10/271 (3%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M   T+    Y+V   +G+G F+ VR   ++ TG   A K++  +  L  R   +++RE 
Sbjct: 21  MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREA 79
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I + ++HPNIVRLH+ +   +  Y++ + VTGGELF+ IV +    E D     QQ+++
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 139
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
           ++A+CHS G+ HR+LKPENLLL S      +K++DFGL A+     E  H   GTP Y++
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL-AIEVNDSEAWHGFAGTPGYLS 198
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
           PEVL    Y     D+W+CGVIL++L+ GY PF + D   LY +I A   ++  P W   
Sbjct: 199 PEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTV 257
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
           +  A SLI  +L  NPK RI  +   K PW 
Sbjct: 258 TPEAKSLIDSMLTVNPKKRITADQALKVPWI 288

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 64  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMI 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 182 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 280

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--DTLCGTLDYLPPEMI 179
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 180 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 278

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 157/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 66  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE +
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEXI 183
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 184 EGRXHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWITANSSKPSNCQNKESAS 282

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 27  KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 87  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMI 204
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 205 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 303

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  189 bits (480), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 151/261 (57%), Gaps = 9/261 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++   IG+G F+ VR      TG   A K++  +  L  R   +++RE  I ++++H 
Sbjct: 5   EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKII-NTKKLSARDHQKLEREARICRLLKHS 63
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVRLH+ ++     Y++ + VTGGELF+ IV +    E D     QQ+++AV HCH  G
Sbjct: 64  NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 123
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           V HRDLKPENLLL S      +K++DFGL+   Q   +      GTP Y++PEVL    Y
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAY 183
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIH 242
            G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   +  A +LI+
Sbjct: 184 -GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 243 KILDPNPKTRIRIEGIRKHPW 263
           ++L  NP  RI      KHPW
Sbjct: 243 QMLTINPAKRITAHEALKHPW 263

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  189 bits (479), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 106/282 (37%), Positives = 155/282 (54%), Gaps = 9/282 (3%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           TR   +Y++   +G+G F+ VR       G+  A  ++  +  L  R   +++RE  I +
Sbjct: 7   TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMII-NTKKLSARDHQKLEREARICR 65
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           +++HPNIVRLH+ ++     Y+I + VTGGELF+ IV +    E D     QQ+++AV H
Sbjct: 66  LLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125
Query: 125 CHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CH  GV HR+LKPENLLL S      +K++DFGL+   +   +      GTP Y++PEVL
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGA 237
               Y G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   +  A
Sbjct: 186 RKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
             LI+K+L  NP  RI      KHPW         C   +E 
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQET 286

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score =  188 bits (477), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 161/282 (57%), Gaps = 8/282 (2%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPE 179
           +++CHSK V HRD+KPENLLL S G LK++DFG S  A   +  +L    CGT +Y+ PE
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPE 177
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS 239
           ++  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  
Sbjct: 178 MIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 236
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
           LI ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 278

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score =  188 bits (477), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 159/281 (56%), Gaps = 6/281 (2%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 3   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 63  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEV 180
           +++CHSK V HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE+
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPEM 179
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  L
Sbjct: 180 IEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 238
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
           I ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 279

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 161/282 (57%), Gaps = 8/282 (2%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 66  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPE 179
           +++CHSK V HRD+KPENLLL S G LK++DFG S  A   +  +L    CGT +Y+ PE
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPE 181
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS 239
           ++  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  
Sbjct: 182 MIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
           LI ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 282

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 4/271 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++  R +D   
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHD-EK 186
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP 
Sbjct: 187 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 246
Query: 251 TRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            R  +  + +HPW   N + P  C  +E  +
Sbjct: 247 QRPMLREVLEHPWITANSSKPSNCQNKESAS 277

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 160/281 (56%), Gaps = 6/281 (2%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 27  KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 87  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEV 180
           +++CHSK V HRD+KPENLLL S G LK++DFG S   P    + L   CGT +Y+ PE+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEM 203
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  L
Sbjct: 204 IEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 262
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
           I ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 303

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 160/279 (57%), Gaps = 8/279 (2%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 1   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 61  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPE 179
           +++CHSK V HRD+KPENLLL S G LK++DFG S  A   +  +L    CGT +Y+ PE
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPPE 176
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS 239
           ++  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  
Sbjct: 177 MIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARD 235
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEE 277
           LI ++L  NP  R  +  + +HPW   N + P  C  +E
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKE 274

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 158/280 (56%), Gaps = 4/280 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 3   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 63  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK+++FG S           T CGT +Y+ PE++
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT--TLCGTLDYLPPEMI 180
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 181 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 279

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/266 (39%), Positives = 154/266 (57%), Gaps = 10/266 (3%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           T+    Y+V   +G+G F+ VR   ++ TG   A K++  +  L  R   +++RE  I +
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICR 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            ++HPNIVRLH+ +   +  Y++ + VTGGELF+ IV +    E D     QQ+++++A+
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CHS G+ HR+LKPENLLL S      +K++DFGL A+     E  H   GTP Y++PEVL
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL-AIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGA 237
               Y     D+W+CGVIL++L+ GY PF + D   LY +I A   ++  P W   +  A
Sbjct: 180 KKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPW 263
            SLI  +L  NPK RI  +   K PW
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPW 264

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 104/266 (39%), Positives = 154/266 (57%), Gaps = 10/266 (3%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           T+    Y+V   +G+G F+ VR   ++ TG   A K++  +  L  R   +++RE  I +
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICR 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            ++HPNIVRLH+ +   +  Y++ + VTGGELF+ IV +    E D     QQ+++++A+
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CHS G+ HR+LKPENLLL S      +K++DFGL A+     E  H   GTP Y++PEVL
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL-AIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGA 237
               Y     D+W+CGVIL++L+ GY PF + D   LY +I A   ++  P W   +  A
Sbjct: 180 KKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPW 263
            SLI  +L  NPK RI  +   K PW
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPW 264

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score =  187 bits (476), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 157/273 (57%), Gaps = 8/273 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRD+KPENLLL S G LK++DFG S  A   +  EL    CGT +Y+ PE++  R +D 
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTEL----CGTLDYLPPEMIEGRMHD- 184
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
              D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  N
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 249 PKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
           P  R  +  + +HPW   N + P  C  +E  +
Sbjct: 245 PSQRPMLREVLEHPWITANSSKPSNCQNKESAS 277

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  187 bits (476), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 104/266 (39%), Positives = 154/266 (57%), Gaps = 10/266 (3%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           T+    Y+V   +G+G F+ VR   ++ TG   A K++  +  L  R   +++RE  I +
Sbjct: 1   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII-NTKKLSARDFQKLEREARICR 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            ++HPNIVRLH+ +   +  Y++ + VTGGELF+ IV +    E D     QQ+++++A+
Sbjct: 60  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CHS G+ HR+LKPENLLL S      +K++DFGL A+     E  H   GTP Y++PEVL
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL-AIEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGA 237
               Y     D+W+CGVIL++L+ GY PF + D   LY +I A   ++  P W   +  A
Sbjct: 179 KKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 237
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPW 263
            SLI  +L  NPK RI  +   K PW
Sbjct: 238 KSLIDSMLTVNPKKRITADQALKVPW 263

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score =  187 bits (476), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 159/281 (56%), Gaps = 6/281 (2%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 6   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   GE++ ++    +  E     Y  +L +A
Sbjct: 66  IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEV 180
           +++CHSK V HRD+KPENLLL S G LK++DFG S   P      L    GT +Y+ PE+
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---XGTLDYLPPEM 182
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  L
Sbjct: 183 IEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 241
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
           I ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 282

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score =  187 bits (475), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 101/280 (36%), Positives = 161/280 (57%), Gaps = 9/280 (3%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           MK+Q   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+
Sbjct: 1   MKRQWA-LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 59
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +
Sbjct: 60  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAP 178
           A+++CHSK V HRD+KPENLLL S G LK++DFG S  A   +  +L    CGT +Y+ P
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDL----CGTLDYLPP 175
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGAT 238
           E++  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA 
Sbjct: 176 EMIEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGAR 234
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEE 277
            LI ++L  NP  R  +  + +HPW   N + P  C  +E
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKE 274

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 152/266 (57%), Gaps = 3/266 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 64  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMI 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 182 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKN 267
            ++L  NP  R  +  + +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score =  186 bits (473), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 155/272 (56%), Gaps = 6/272 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE++  R +D  
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMIEGRMHD-E 188
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 250 KTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
             R  +  + +HPW   N + P  C  +E  +
Sbjct: 249 SQRPMLREVLEHPWITANSSKPSNCQNKESAS 280

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  186 bits (471), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 153/267 (57%), Gaps = 5/267 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 64  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEV 180
           +++CHSK V HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPEM 180
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  L
Sbjct: 181 IEGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDL 239
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKN 267
           I ++L  NP  R  +  + +HPW   N
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score =  185 bits (469), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 148/257 (57%), Gaps = 3/257 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 69  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 128
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++  R +D   
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHD-EK 185
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP 
Sbjct: 186 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 245
Query: 251 TRIRIEGIRKHPWFRKN 267
            R  +  + +HPW   N
Sbjct: 246 QRPMLREVLEHPWITAN 262

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score =  185 bits (469), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 152/266 (57%), Gaps = 3/266 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 4   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 64  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK+++FG S           T CGT +Y+ PE++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRT--TLCGTLDYLPPEMI 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 182 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKN 267
            ++L  NP  R  +  + +HPW   N
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN 266

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score =  185 bits (469), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 148/257 (57%), Gaps = 3/257 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 133
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++  R +D   
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHD-EK 190
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP 
Sbjct: 191 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 250
Query: 251 TRIRIEGIRKHPWFRKN 267
            R  +  + +HPW   N
Sbjct: 251 QRPMLREVLEHPWITAN 267

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEIXINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  184 bits (468), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score =  184 bits (467), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score =  184 bits (467), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 156/277 (56%), Gaps = 3/277 (1%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S           T  GT +Y+ PE++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRT--TLSGTLDYLPPEMI 179
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 180 EGRMHD-EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEE 278
            ++L  NP  R  +  + +HPW   N +    S+ +E
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNSQNKE 275

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 4   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 58
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 59  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 239 LLHKILVENPSARITIPDIKKDRWYNK 265

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 147/257 (57%), Gaps = 3/257 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ ++    +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 67  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 126
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++  R +D   
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIEGRMHD-EK 183
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP 
Sbjct: 184 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPS 243
Query: 251 TRIRIEGIRKHPWFRKN 267
            R  +  + +HPW   N
Sbjct: 244 QRPMLREVLEHPWITAN 260

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score =  184 bits (467), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 152/265 (57%), Gaps = 3/265 (1%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+   +  +++GR +G+G F  V  A+ R++   +A+KVL K+ + K  +  Q++RE+ I
Sbjct: 6   KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
              +RHPNI+RL+      T+VY+ILE+   G ++ ++    R  E     Y  +L +A+
Sbjct: 66  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           ++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++ 
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRT--TLCGTLDYLPPEMIE 183
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
            R +D    D+WS GV+ +  + G  PF        Y++I+  EF+ P + + GA  LI 
Sbjct: 184 GRMHD-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLIS 242
Query: 243 KILDPNPKTRIRIEGIRKHPWFRKN 267
           ++L  N   R+ +  + +HPW + N
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKAN 267

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score =  184 bits (467), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 152/265 (57%), Gaps = 3/265 (1%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+   +  +++GR +G+G F  V  A+ R++   +A+KVL K+ + K  +  Q++RE+ I
Sbjct: 6   KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
              +RHPNI+RL+      T+VY+ILE+   G ++ ++    R  E     Y  +L +A+
Sbjct: 66  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           ++CHSK V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++ 
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR--DTLCGTLDYLPPEMIE 183
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
            R +D    D+WS GV+ +  + G  PF        Y++I+  EF+ P + + GA  LI 
Sbjct: 184 GRMHD-EKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLIS 242
Query: 243 KILDPNPKTRIRIEGIRKHPWFRKN 267
           ++L  N   R+ +  + +HPW + N
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKAN 267

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score =  184 bits (467), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score =  184 bits (467), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score =  184 bits (467), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score =  184 bits (466), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 150/267 (56%), Gaps = 3/267 (1%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M K+   +  +++GR +G+G F  V  A+ ++    +A+KVL KS + K  +  Q++REI
Sbjct: 7   MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 66
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I   +RHPNI+R++     R ++Y++LEF   GEL+ ++   GR  E     + ++L D
Sbjct: 67  EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 126
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+ +CH + V HRD+KPENLL+   G LK++DFG S             CGT +Y+ PE+
Sbjct: 127 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV--HAPSLRRRXMCGTLDYLPPEM 184
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  + +D    D+W  GV+ +  + G  PF        +++I   +   P + S G+  L
Sbjct: 185 IEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL 243
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKN 267
           I K+L  +P  R+ ++G+ +HPW + N
Sbjct: 244 ISKLLRYHPPQRLPLKGVMEHPWVKAN 270

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score =  184 bits (466), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score =  184 bits (466), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 149/258 (57%), Gaps = 5/258 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE++  R +D  
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMIEGRMHD-E 185
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 250 KTRIRIEGIRKHPWFRKN 267
             R  +  + +HPW   N
Sbjct: 246 SQRPMLREVLEHPWITAN 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 149/258 (57%), Gaps = 5/258 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE++  R +D  
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL---CGTLDYLPPEMIEGRMHD-E 185
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 250 KTRIRIEGIRKHPWFRKN 267
             R  +  + +HPW   N
Sbjct: 246 SQRPMLREVLEHPWITAN 263

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 149/258 (57%), Gaps = 5/258 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 70  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 129
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE++  R +D  
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL---CGTLDYLPPEMIEGRMHD-E 185
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 250 KTRIRIEGIRKHPWFRKN 267
             R  +  + +HPW   N
Sbjct: 246 SQRPMLREVLEHPWITAN 263

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 150/258 (58%), Gaps = 5/258 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 73  ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV 132
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KPENLLL S G LK++DFG S   P    + L   CGT +Y+ PE++  R +D  
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL---CGTLDYLPPEMIEGRMHD-E 188
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 189 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 248
Query: 250 KTRIRIEGIRKHPWFRKN 267
             R  +  + +HPW   N
Sbjct: 249 SQRPMLREVLEHPWITAN 266

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score =  183 bits (464), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 148/258 (57%), Gaps = 5/258 (1%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+GR +G+G F  V  A+ + +   +A+KVL K+ + K  +  Q++RE+ I   +RHPN
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK V
Sbjct: 70  ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKV 129
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KPENLLL S G LK++DFG S   P      L   CGT +Y+ PE++  R +D  
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL---CGTLDYLPPEMIEGRMHD-E 185
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 186 KVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHNP 245
Query: 250 KTRIRIEGIRKHPWFRKN 267
             R  +  + +HPW   N
Sbjct: 246 SQRPMLREVLEHPWITAN 263

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score =  182 bits (463), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I  
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINA 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  182 bits (462), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG   +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  181 bits (458), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+   GT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  181 bits (458), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/264 (40%), Positives = 151/264 (57%), Gaps = 13/264 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y +  TIG G++ +V+ A  + T    A K + K  +     VD+ K+EI IMK + HPN
Sbjct: 11  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPN 67
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+E     T +Y+++E  TGGELF+++VH+    E+D  R  + ++ AVA+CH   V
Sbjct: 68  IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 131 YHRDLKPENLLL--DSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPEN L   DS  + LK+ DFGL+A  + G +++ T  GTP YV+P+VL   G  
Sbjct: 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLE--GLY 184
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF--WF--STGATSLIHK 243
           G   D WS GV+++VL+ GY PF       +  KI    F+ P   W   S  A SLI +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
Query: 244 ILDPNPKTRIRIEGIRKHPWFRKN 267
           +L  +PK RI      +H WF K 
Sbjct: 245 LLTKSPKQRITSLQALEHEWFEKQ 268

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  181 bits (458), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 106/264 (40%), Positives = 151/264 (57%), Gaps = 13/264 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y +  TIG G++ +V+ A  + T    A K + K  +     VD+ K+EI IMK + HPN
Sbjct: 28  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPN 84
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+RL+E     T +Y+++E  TGGELF+++VH+    E+D  R  + ++ AVA+CH   V
Sbjct: 85  IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 144
Query: 131 YHRDLKPENLLL--DSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPEN L   DS  + LK+ DFGL+A  + G +++ T  GTP YV+P+VL   G  
Sbjct: 145 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVLE--GLY 201
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF--WF--STGATSLIHK 243
           G   D WS GV+++VL+ GY PF       +  KI    F+ P   W   S  A SLI +
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
Query: 244 ILDPNPKTRIRIEGIRKHPWFRKN 267
           +L  +PK RI      +H WF K 
Sbjct: 262 LLTKSPKQRITSLQALEHEWFEKQ 285

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  180 bits (457), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 152/270 (56%), Gaps = 9/270 (3%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M   TR    Y++   +G+G F+ VR    +   +  A K++  +  L  R   +++RE 
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKII-NTKKLSARDHQKLEREA 81
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I ++++HPNIVRLH+ ++     Y++ + VTGGELF+ IV +    E D      Q+++
Sbjct: 82  RICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE 141
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
           +V H H   + HRDLKPENLLL S      +K++DFGL+   Q   +      GTP Y++
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLS 201
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
           PEVL    Y G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   
Sbjct: 202 PEVLRKDPY-GKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTV 260
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPW 263
           +  A +LI+++L  NP  RI  +   KHPW
Sbjct: 261 TPEAKNLINQMLTINPAKRITADQALKHPW 290

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEIXINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+   GT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 149/267 (55%), Gaps = 3/267 (1%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M K+   +  +++ R +G+G F  V  A+ ++    +A+KVL KS + K  +  Q++REI
Sbjct: 6   MPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I   +RHPNI+R++     R ++Y++LEF   GEL+ ++   GR  E     + ++L D
Sbjct: 66  EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+ +CH + V HRD+KPENLL+   G LK++DFG S             CGT +Y+ PE+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSV--HAPSLRRRXMCGTLDYLPPEM 183
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  + +D    D+W  GV+ +  + G  PF        +++I   +   P + S G+  L
Sbjct: 184 IEGKTHD-EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL 242
Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKN 267
           I K+L  +P  R+ ++G+ +HPW + N
Sbjct: 243 ISKLLRYHPPQRLPLKGVMEHPWVKAN 269

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEIXINK 60
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+   GT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNK 267

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+   GT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  180 bits (456), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 13/267 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMK 64
           V  +++ +T+GEG + +V+ A NR T E+VA+K++        R VD    IK+EI I K
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK-----RAVDCPENIKKEICINK 59
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 60  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+   GT  YVAPE+L 
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+ + +D    Y      +     W    +   +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           L+HKIL  NP  RI I  I+K  W+ K
Sbjct: 240 LLHKILVENPSARITIPDIKKDRWYNK 266

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  177 bits (448), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 152/264 (57%), Gaps = 11/264 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +   +G+G+F +V   ++R T +  A+KV+ K++  K++    I RE+ ++K + HP
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHP 81
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L E+L   +  YI+ E  TGGELFD+I+ + R  E+D  R  +Q+   + + H   
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPEN+LL+S     ++K+ DFGLS   QQ  + +    GT  Y+APEVL  RG 
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVL--RGT 198
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
                DVWS GVIL++L++G  PF   +   + K++   +  F  P W   S  A  LI 
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 243 KILDPNPKTRIRIEGIRKHPWFRK 266
           K+L  +P  RI      +HPW +K
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 22/297 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+K+++K    I   R  D    ++ EI I+K
Sbjct: 10  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 70  KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 187
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAE--FSCPFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +  F    W   S
Sbjct: 188 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 247
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWF-----RKNYNPVKCSEEEEVNLDDVHA 286
             A  L+ K+L  +PK R   E   +HPW      ++ +  +   E E   L  V A
Sbjct: 248 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLA 304

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  176 bits (447), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 22/297 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+K+++K    I   R  D    ++ EI I+K
Sbjct: 11  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 71  KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 188
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAE--FSCPFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +  F    W   S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWF-----RKNYNPVKCSEEEEVNLDDVHA 286
             A  L+ K+L  +PK R   E   +HPW      ++ +  +   E E   L  V A
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLA 305

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/271 (38%), Positives = 154/271 (56%), Gaps = 17/271 (6%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+K+++K    I   R  D    ++ EI I+K
Sbjct: 11  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 71  KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 188
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAE--FSCPFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +  F    W   S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
             A  L+ K+L  +PK R   E   +HPW +
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  176 bits (447), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 22/297 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+K+++K    I   R  D    ++ EI I+K
Sbjct: 11  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 71  KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 188
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAE--FSCPFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +  F    W   S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWF-----RKNYNPVKCSEEEEVNLDDVHA 286
             A  L+ K+L  +PK R   E   +HPW      ++ +  +   E E   L  V A
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLA 305

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 162/297 (54%), Gaps = 22/297 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+K+++K    I   R  D    ++ EI I+K
Sbjct: 17  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 77  KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 194
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAE--FSCPFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +  F    W   S
Sbjct: 195 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 254
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWF-----RKNYNPVKCSEEEEVNLDDVHA 286
             A  L+ K+L  +PK R   E   +HPW      ++ +  +   E E   L  V A
Sbjct: 255 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALPQVLA 311

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 155/262 (59%), Gaps = 11/262 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +++ RT+G G+F +V   ++R  G   AMKVL K  +++ + V+    E  ++ IV HP 
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+R+        ++++I++++ GGELF  +    R      + Y  ++  A+ + HSK +
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            +RDLKPEN+LLD  G++K++DFG +  +P    ++ +  CGTP+Y+APEV+S + Y+ S
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAPEVVSTKPYNKS 183
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D WS G++++ ++AGY PF +++    Y+KI  AE   P +F+     L+ +++  + 
Sbjct: 184 -IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDL 242
Query: 250 KTRI-----RIEGIRKHPWFRK 266
             R+       E ++ HPWF++
Sbjct: 243 SQRLGNLQNGTEDVKNHPWFKE 264

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 152/264 (57%), Gaps = 11/264 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +   +G+G+F +V   ++R T +  A+KV+ K++  K++    I RE+ ++K + HP
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHP 81
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L E+L   +  YI+ E  TGGELFD+I+ + R  E+D  R  +Q+   + + H   
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPEN+LL+S     ++K+ DFGLS   QQ  + +    GT  Y+APEVL  RG 
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVL--RGT 198
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
                DVWS GVIL++L++G  PF   +   + K++   +  F  P W   S  A  LI 
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 243 KILDPNPKTRIRIEGIRKHPWFRK 266
           K+L  +P  RI      +HPW +K
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/264 (37%), Positives = 152/264 (57%), Gaps = 11/264 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +   +G+G+F +V   ++R T +  A+KV+ K++  K++    I RE+ ++K + HP
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHP 81
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L E+L   +  YI+ E  TGGELFD+I+ + R  E+D  R  +Q+   + + H   
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPEN+LL+S     ++K+ DFGLS   QQ  + +    GT  Y+APEVL  RG 
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVL--RGT 198
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
                DVWS GVIL++L++G  PF   +   + K++   +  F  P W   S  A  LI 
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 243 KILDPNPKTRIRIEGIRKHPWFRK 266
           K+L  +P  RI      +HPW +K
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQK 282

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  174 bits (441), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 153/263 (58%), Gaps = 19/263 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ--IKREISIMKIVRH 68
           +EV   +G G  + V   + + T +  A+KVL K+       VD+  ++ EI ++  + H
Sbjct: 55  FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT-------VDKKIVRTEIGVLLRLSH 107
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PNI++L E+  + T++ ++LE VTGGELFD+IV +G   E D     +Q+++AVA+ H  
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 129 GVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           G+ HRDLKPENLL  +      LK++DFGLS + +  V L+ T CGTP Y APE+L    
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV-LMKTVCGTPGYCAPEILRGCA 226
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAE--FSCPFW--FSTGATSL 240
           Y G   D+WS G+I ++L+ G+ PF  E     ++++I   E  F  P+W   S  A  L
Sbjct: 227 Y-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDL 285
Query: 241 IHKILDPNPKTRIRIEGIRKHPW 263
           + K++  +PK R+      +HPW
Sbjct: 286 VRKLIVLDPKKRLTTFQALQHPW 308

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  174 bits (441), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 103/271 (38%), Positives = 155/271 (57%), Gaps = 17/271 (6%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+++++K    I   R  D    ++ EI I+K
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 210 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 327
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSC--PFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +++     W   S
Sbjct: 328 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 387
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
             A  L+ K+L  +PK R   E   +HPW +
Sbjct: 388 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  174 bits (440), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/271 (38%), Positives = 155/271 (57%), Gaps = 17/271 (6%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKS--TILKHRMVD---QIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+++++K    I   R  D    ++ EI I+K
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 196 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-TSLMRTLCGTPTYLAPEVL 313
Query: 182 SNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSC--PFW--FS 234
            + G  G   A D WS GVILF+ ++GY PF E     +L  +I + +++     W   S
Sbjct: 314 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 373
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
             A  L+ K+L  +PK R   E   +HPW +
Sbjct: 374 EKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score =  174 bits (440), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 148/262 (56%), Gaps = 2/262 (0%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++  ++VG  +G+G+FA V  A++  TG  VA+K++ K  + K  MV +++ E+ I   +
Sbjct: 9   KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHC 125
           +HP+I+ L+        VY++LE    GE+   + ++ +   EN+ R +  Q+I  + + 
Sbjct: 69  KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HS G+ HRDL   NLLL    N+K++DFGL+   +   E  +T CGTPNY++PE+ + R 
Sbjct: 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEI-ATRS 187
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
             G  +DVWS G + + L+ G  PF    +     K+  A++  P + S  A  LIH++L
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQLL 247
Query: 246 DPNPKTRIRIEGIRKHPWFRKN 267
             NP  R+ +  +  HP+  +N
Sbjct: 248 RRNPADRLSLSSVLDHPFMSRN 269

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMK 64
           +++E+ + +G+G+F KV F   + +G       AMKVL K+T LK R   + K E  I+ 
Sbjct: 24  SQFELLKVLGQGSFGKV-FLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILV 81
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            V HP IV+LH    +  K+Y+IL+F+ GG+LF ++  +    E D + Y  +L  A+ H
Sbjct: 82  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ +RDLKPEN+LLD  G++K++DFGLS       +  ++ CGT  Y+APEV++ R
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
           G+  S AD WS GV++F ++ G LPF   D       I  A+   P + S  A SL+  +
Sbjct: 202 GHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRML 260
Query: 245 LDPNPKTRI-----RIEGIRKHPWF 264
              NP  R+      +E I++H +F
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFF 285

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score =  170 bits (430), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMK 64
           +++E+ + +G+G+F KV F   + +G       AMKVL K+T LK R   + K E  I+ 
Sbjct: 25  SQFELLKVLGQGSFGKV-FLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILV 82
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            V HP IV+LH    +  K+Y+IL+F+ GG+LF ++  +    E D + Y  +L  A+ H
Sbjct: 83  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ +RDLKPEN+LLD  G++K++DFGLS       +  ++ CGT  Y+APEV++ R
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
           G+  S AD WS GV++F ++ G LPF   D       I  A+   P + S  A SL+  +
Sbjct: 203 GHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRML 261
Query: 245 LDPNPKTRI-----RIEGIRKHPWF 264
              NP  R+      +E I++H +F
Sbjct: 262 FKRNPANRLGAGPDGVEEIKRHSFF 286

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 153/265 (57%), Gaps = 12/265 (4%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMK 64
           +++E+ + +G+G+F KV F   + +G       AMKVL K+T LK R   + K E  I+ 
Sbjct: 24  SQFELLKVLGQGSFGKV-FLVKKISGSDARQLYAMKVLKKAT-LKVRDRVRTKMERDILV 81
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            V HP IV+LH    +  K+Y+IL+F+ GG+LF ++  +    E D + Y  +L  A+ H
Sbjct: 82  EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ +RDLKPEN+LLD  G++K++DFGLS       +  ++ CGT  Y+APEV++ R
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
           G+  S AD WS GV++F ++ G LPF   D       I  A+   P + S  A SL+  +
Sbjct: 202 GHTQS-ADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRML 260
Query: 245 LDPNPKTRI-----RIEGIRKHPWF 264
              NP  R+      +E I++H +F
Sbjct: 261 FKRNPANRLGAGPDGVEEIKRHSFF 285

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 170/328 (51%), Gaps = 21/328 (6%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + +G G + +V   +++ TG   A+K++ KS++        +  E++++K + HP
Sbjct: 5   RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L+E    +   Y+++E   GGELFD+I+ + +  E D     +Q++    + H   
Sbjct: 65  NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 130 VYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S      +K+ DFGLSA  + G + +    GT  Y+APEVL  + Y
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAPEVLRKK-Y 182
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC--PFW--FSTGATSLIH 242
           D    DVWSCGVIL++L+ GY PFG      + K++   +FS   P W   S  A  L+ 
Sbjct: 183 D-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDV--HAVFDDIEDQYVAEQS 300
            +L   P  RI  E    HPW  K      CS++      DV  HA+   + +    + S
Sbjct: 242 LMLTYEPSKRISAEEALNHPWIVKF-----CSQKHT----DVGKHALTGALGNMKKFQSS 292
Query: 301 ENKVGGPLLMNAFEMITLSQGLNLAALF 328
           +      +L    ++ TL +   L  +F
Sbjct: 293 QKLAQAAMLFMGSKLTTLEETKELTQIF 320

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 157/267 (58%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           YE+G  +G G FA VR  + + TG+  A K + K  +   R     ++I+RE++I++ +R
Sbjct: 28  YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNI+ LH++  ++T V +ILE V+GGELFD +  +  L E++  ++ +Q++D V + HS
Sbjct: 88  HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 147
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           K + H DLKPEN++L         +K+ DFG++   + G E      GTP +VAPE+++ 
Sbjct: 148 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 206
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTG--AT 238
               G  AD+WS GVI ++L++G  PF GET   TL   I+A   +F   ++ +T   A 
Sbjct: 207 EPL-GLEADMWSIGVITYILLSGASPFLGETKQETL-TNISAVNYDFDEEYFSNTSELAK 264
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I    +H W +
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWIK 291

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  168 bits (425), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 157/267 (58%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           YE+G  +G G FA VR  + + TG+  A K + K  +   R     ++I+RE++I++ +R
Sbjct: 14  YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNI+ LH++  ++T V +ILE V+GGELFD +  +  L E++  ++ +Q++D V + HS
Sbjct: 74  HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           K + H DLKPEN++L         +K+ DFG++   + G E      GTP +VAPE+++ 
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 192
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTG--AT 238
               G  AD+WS GVI ++L++G  PF GET   TL   I+A   +F   ++ +T   A 
Sbjct: 193 EPL-GLEADMWSIGVITYILLSGASPFLGETKQETL-TNISAVNYDFDEEYFSNTSELAK 250
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I    +H W +
Sbjct: 251 DFIRRLLVKDPKRRMXIAQSLEHSWIK 277

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 10/263 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  R +G+G+F +V   +++ TG+  A+KV++K  + +    + + RE+ ++K + HP
Sbjct: 27  RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L+E    +   Y++ E  TGGELFD+I+ + R  E D  R  +Q++  + + H   
Sbjct: 87  NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S     N+++ DFGLS    +  + +    GT  Y+APEVL    Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKIGTAYYIAPEVLHGT-Y 204
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
           D    DVWS GVIL++L++G  PF   +   + KK+   +  F  P W   S  A  LI 
Sbjct: 205 D-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 243 KILDPNPKTRIRIEGIRKHPWFR 265
           K+L   P  RI       H W +
Sbjct: 264 KMLTYVPSMRISARDALDHEWIQ 286

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  168 bits (425), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 146/264 (55%), Gaps = 10/264 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + +G G + +V   +++ TG   A+K++ KS++        +  E++++K + HP
Sbjct: 22  RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L+E    +   Y+++E   GGELFD+I+ + +  E D     +Q++    + H   
Sbjct: 82  NIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHN 141
Query: 130 VYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S      +K+ DFGLSA  + G + +    GT  Y+APEVL  + Y
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAPEVLRKK-Y 199
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC--PFW--FSTGATSLIH 242
           D    DVWSCGVIL++L+ GY PFG      + K++   +FS   P W   S  A  L+ 
Sbjct: 200 D-EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 258
Query: 243 KILDPNPKTRIRIEGIRKHPWFRK 266
            +L   P  RI  E    HPW  K
Sbjct: 259 LMLTYEPSKRISAEEALNHPWIVK 282

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  167 bits (424), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 157/267 (58%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           YE+G  +G G FA VR  + + TG+  A K + K  +   R     ++I+RE++I++ +R
Sbjct: 7   YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNI+ LH++  ++T V +ILE V+GGELFD +  +  L E++  ++ +Q++D V + HS
Sbjct: 67  HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           K + H DLKPEN++L         +K+ DFG++   + G E      GTP +VAPE+++ 
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAPEIVNY 185
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTG--AT 238
               G  AD+WS GVI ++L++G  PF GET   TL   I+A   +F   ++ +T   A 
Sbjct: 186 EPL-GLEADMWSIGVITYILLSGASPFLGETKQETL-TNISAVNYDFDEEYFSNTSELAK 243
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I    +H W +
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIK 270

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  167 bits (424), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 10/263 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  R +G+G+F +V   +++ TG+  A+KV++K  + +    + + RE+ ++K + HP
Sbjct: 50  RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L+E    +   Y++ E  TGGELFD+I+ + R  E D  R  +Q++  + + H   
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S     N+++ DFGLS    +  + +    GT  Y+APEVL    Y
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKIGTAYYIAPEVLHGT-Y 227
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
           D    DVWS GVIL++L++G  PF   +   + KK+   +  F  P W   S  A  LI 
Sbjct: 228 D-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 286
Query: 243 KILDPNPKTRIRIEGIRKHPWFR 265
           K+L   P  RI       H W +
Sbjct: 287 KMLTYVPSMRISARDALDHEWIQ 309

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score =  167 bits (424), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 142/260 (54%), Gaps = 3/260 (1%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  +E+GR +G+G F  V  A+ +++   VA+KVL KS I K  +  Q++REI I   + 
Sbjct: 22  IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNI+RL+     R ++Y+ILE+   GEL+ ++       E       ++L DA+ +CH 
Sbjct: 82  HPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHG 141
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           K V HRD+KPENLLL   G LK++DFG S           T CGT +Y+ PE++  R ++
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKIADFGWSV--HAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
               D+W  GV+ + L+ G  PF        Y++I   +   P    TGA  LI K+L  
Sbjct: 200 -EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLLRH 258
Query: 248 NPKTRIRIEGIRKHPWFRKN 267
           NP  R+ +  +  HPW R N
Sbjct: 259 NPSERLPLAQVSAHPWVRAN 278

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score =  167 bits (424), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 151/264 (57%), Gaps = 10/264 (3%)
Query: 9   AKYEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           + +E+ + +G+G+F KV   R     ++G   AMKVL K+T LK R   + K E  I+  
Sbjct: 28  SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKAT-LKVRDRVRTKMERDILAD 86
Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           V HP +V+LH    +  K+Y+IL+F+ GG+LF ++  +    E D + Y  +L   + H 
Sbjct: 87  VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HS G+ +RDLKPEN+LLD  G++K++DFGLS       +  ++ CGT  Y+APEV++ +G
Sbjct: 147 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           +  S AD WS GV++F ++ G LPF   D       I  A+   P + ST A SL+  + 
Sbjct: 207 HSHS-ADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALF 265
Query: 246 DPNPKTRI-----RIEGIRKHPWF 264
             NP  R+       E I++H ++
Sbjct: 266 KRNPANRLGSGPDGAEEIKRHVFY 289

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  167 bits (424), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 10/263 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  R +G+G+F +V   +++ TG+  A+KV++K  + +    + + RE+ ++K + HP
Sbjct: 51  RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L+E    +   Y++ E  TGGELFD+I+ + R  E D  R  +Q++  + + H   
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S     N+++ DFGLS    +  + +    GT  Y+APEVL    Y
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKIGTAYYIAPEVLHGT-Y 228
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
           D    DVWS GVIL++L++G  PF   +   + KK+   +  F  P W   S  A  LI 
Sbjct: 229 D-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 287
Query: 243 KILDPNPKTRIRIEGIRKHPWFR 265
           K+L   P  RI       H W +
Sbjct: 288 KMLTYVPSMRISARDALDHEWIQ 310

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  166 bits (421), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 157/274 (57%), Gaps = 16/274 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y+  + +G G + +V   +++ T    A+K++ K+++       ++  E++++K++ HPN
Sbjct: 39  YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV-STSSNSKLLEEVAVLKLLDHPN 97
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I++L++    +   Y+++E   GGELFD+I+H+ +  E D     +Q++  V + H   +
Sbjct: 98  IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI 157
Query: 131 YHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            HRDLKPENLLL+S      +K+ DFGLSA+ +   + +    GT  Y+APEVL  + YD
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERLGTAYYIAPEVLRKK-YD 215
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIHK 243
               DVWS GVILF+L+AGY PFG      + +K+   +  F  P W   S GA  LI +
Sbjct: 216 -EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQ 274
Query: 244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
           +L  + + RI  +   +HPW ++      CS++E
Sbjct: 275 MLQFDSQRRISAQQALEHPWIKE-----MCSKKE 303

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 10/263 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  R +G+G+F +V   +++ TG+  A+KV++K  + +    + + RE+ ++K + HP
Sbjct: 33  RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L+E    +   Y++ E  TGGELFD+I+ + R  E D  R  +Q++  + + H   
Sbjct: 93  NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 152
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S     N+++ DFGLS    +  + +    GT  Y+APEVL    Y
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKMKDKIGTAYYIAPEVLHGT-Y 210
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
           D    DVWS GVIL++L++G  PF   +   + KK+   +  F  P W   S  A  LI 
Sbjct: 211 D-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 269
Query: 243 KILDPNPKTRIRIEGIRKHPWFR 265
           K+L   P  RI       H W +
Sbjct: 270 KMLTYVPSMRISARDALDHEWIQ 292

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  166 bits (420), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/273 (38%), Positives = 155/273 (56%), Gaps = 15/273 (5%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65
Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V HPNI+ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 120 DAVAHCHSKGVYHRDLKPEN-LLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN +LLD      ++K+ DFGL+   + GVE      GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEF 184
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW 232
           VAPE++ N    G  AD+WS GVI ++L++G  PF G+T   TL   I A   +F   F+
Sbjct: 185 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANITAVSYDFDEEFF 242
Query: 233 FSTG--ATSLIHKILDPNPKTRIRIEGIRKHPW 263
             T   A   I K+L    + R+ I+   +HPW
Sbjct: 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 151/266 (56%), Gaps = 22/266 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVR 73
           + +GEG+F+  R   ++++ ++ A+K+++K      RM    ++EI+ +K+   HPNIV+
Sbjct: 17  KPLGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVK 70
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LHEV   +   ++++E + GGELF++I  +    E +     ++L+ AV+H H  GV HR
Sbjct: 71  LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 134 DLKPENLLL-DSYGNL--KVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
           DLKPENLL  D   NL  K+ DFG + L     + L T C T +Y APE+L+  GYD S 
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDES- 189
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLP-------TLYKKINAAEFS--CPFW--FSTGATS 239
            D+WS GVIL+ +++G +PF   D          + KKI   +FS     W   S  A  
Sbjct: 190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFR 265
           LI  +L  +P  R+++ G+R + W +
Sbjct: 250 LIQGLLTVDPNKRLKMSGLRYNEWLQ 275

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +TIG G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 28  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 88  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 147
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 204
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 205 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 263
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 264 NLLQVDLTKRFGNLKNGVNDIKNHKWF 290

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score =  165 bits (418), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 145/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  RT+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
            + V  P +V+L       + +Y++LE+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  QQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score =  165 bits (417), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score =  165 bits (417), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 28  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 87
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 88  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 147
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 204
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 205 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 263
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 264 NLLQVDLTKRFGNLKNGVNDIKNHKWF 290

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score =  164 bits (416), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score =  164 bits (416), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score =  164 bits (416), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 56  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +       T CGTP Y+APE++ 
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT---WTLCGTPEYLAPEIIL 232
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 233 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 291
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 292 NLLQVDLTKRFGNLKNGVNDIKNHKWF 318

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  164 bits (415), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 144/263 (54%), Gaps = 10/263 (3%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  R +G+G+F +V   +++ TG+  A+KV++K  + +    + + RE+ ++K + HP
Sbjct: 27  RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI +L+E    +   Y++ E  TGGELFD+I+ + R  E D  R  +Q++  + + H   
Sbjct: 87  NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 130 VYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLLL+S     N+++ DFGLS    +  +      GT  Y+APEVL    Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLST-HFEASKKXKDKIGTAYYIAPEVLHGT-Y 204
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
           D    DVWS GVIL++L++G  PF   +   + KK+   +  F  P W   S  A  LI 
Sbjct: 205 D-EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIR 263
Query: 243 KILDPNPKTRIRIEGIRKHPWFR 265
           K L   P  RI       H W +
Sbjct: 264 KXLTYVPSXRISARDALDHEWIQ 286

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score =  164 bits (415), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 56  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 232
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 233 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 291
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 292 NLLQVDLTKRFGNLKNGVNDIKNHKWF 318

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 21  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 80
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 81  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 140
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +       T CGTP Y+APE++ 
Sbjct: 141 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WTLCGTPEYLAPEIIL 197
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 198 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 256
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 257 NLLQVDLTKRFGNLKDGVNDIKNHKWF 283

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 149/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF   +   +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  164 bits (414), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +       T CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WTLCGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 30  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 89
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 90  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 149
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 150 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 206
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 207 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 265
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 266 NLLQVDLTKRFGNLKNGVNDIKNHKWF 292

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 56  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 115
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 175
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 232
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 233 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 291
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 292 NLLQVDLTKRFGNLKNGVNDIKNHKWF 318

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   +++ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I  H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIXNHKWF 298

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKDGVNDIKNHKWF 297

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 22  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 81
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 82  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 141
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 142 EYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 198
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 199 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 257
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 258 NLLQVDLTKRFGNLKNGVNDIKNHKWF 284

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLPNGVNDIKNHKWF 297

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE++ N
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIV-N 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFGL+   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +TIG G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E++ GG++F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +TIG G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E++ GG++F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 145/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE++ N
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPAFVAPEIV-N 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 145/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 191 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 248
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 12  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 72  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 190
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 191 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 248
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIII 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score =  162 bits (410), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/272 (36%), Positives = 154/272 (56%), Gaps = 13/272 (4%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V H N++ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 120 DAVAHCHSKGVYHRDLKPEN-LLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN +LLD      ++K+ DFGL+   + GVE      GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEF 184
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA-EFSCPFWF 233
           VAPE+++     G  AD+WS GVI ++L++G  PF G+T   TL    + + +F   F+ 
Sbjct: 185 VAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 234 STG--ATSLIHKILDPNPKTRIRIEGIRKHPW 263
            T   A   I K+L    + R+ I+   +HPW
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 154/272 (56%), Gaps = 13/272 (4%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V H N++ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 120 DAVAHCHSKGVYHRDLKPEN-LLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN +LLD      ++K+ DFGL+   + GVE      GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEF 184
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA-EFSCPFWF 233
           VAPE++ N    G  AD+WS GVI ++L++G  PF G+T   TL    + + +F   F+ 
Sbjct: 185 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 234 STG--ATSLIHKILDPNPKTRIRIEGIRKHPW 263
            T   A   I K+L    + R+ I+   +HPW
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/273 (37%), Positives = 154/273 (56%), Gaps = 15/273 (5%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V H N++ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 120 DAVAHCHSKGVYHRDLKPEN-LLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN +LLD      ++K+ DFGL+   + GVE      GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEF 184
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW 232
           VAPE++ N    G  AD+WS GVI ++L++G  PF G+T   TL   I A   +F   F+
Sbjct: 185 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETL-ANITAVSYDFDEEFF 242
Query: 233 FSTG--ATSLIHKILDPNPKTRIRIEGIRKHPW 263
             T   A   I K+L    + R+ I+   +HPW
Sbjct: 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  162 bits (409), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/273 (36%), Positives = 154/273 (56%), Gaps = 15/273 (5%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V H N++ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 120 DAVAHCHSKGVYHRDLKPEN-LLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN +LLD      ++K+ DFGL+   + GVE      GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEF 184
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW 232
           VAPE+++     G  AD+WS GVI ++L++G  PF G+T   TL   I A   +F   F+
Sbjct: 185 VAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANITAVSYDFDEEFF 242
Query: 233 FSTG--ATSLIHKILDPNPKTRIRIEGIRKHPW 263
             T   A   I K+L    + R+ I+   +HPW
Sbjct: 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  161 bits (408), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 154/272 (56%), Gaps = 13/272 (4%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIERE 65
Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V H N++ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 120 DAVAHCHSKGVYHRDLKPEN-LLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN +LLD      ++K+ DFGL+   + GVE      GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPEF 184
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA-EFSCPFWF 233
           VAPE++ N    G  AD+WS GVI ++L++G  PF G+T   TL    + + +F   F+ 
Sbjct: 185 VAPEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFS 243
Query: 234 STG--ATSLIHKILDPNPKTRIRIEGIRKHPW 263
            T   A   I K+L    + R+ I+   +HPW
Sbjct: 244 HTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score =  161 bits (408), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 146/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G ++V+DFGL+   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score =  161 bits (407), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P + +L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score =  161 bits (407), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 145/267 (54%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  160 bits (406), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 148/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPN-----PKTRIRIEGIRKHPWF 264
            +L  +        +  +  I+ H WF
Sbjct: 271 NLLQVDLTKAFGNLKNGVNDIKNHKWF 297

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score =  160 bits (406), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P + +L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP Y+AP ++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAPAIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 144/267 (53%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T  + ++E  +T+G G+F +V   ++ ETG   AMK+L K  ++K + ++    E  I
Sbjct: 36  QNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P + +L       + +Y+++E+  GGE+F  +   GR  E   R Y  Q++   
Sbjct: 96  LQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENL++D  G +KV+DFG +   +     L   CGTP Y+APE++ 
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAPEIIL 212
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 213 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 271
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 272 NLLQVDLTKRFGNLKNGVNDIKNHKWF 298

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L    GTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  159 bits (403), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L   CGTP  +APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEALAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 150/267 (56%), Gaps = 15/267 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR 67
           Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K ++
Sbjct: 13  YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPN++ LHEV  ++T V +I E V GGELFD +  +  L E +   + +Q+++ V + HS
Sbjct: 73  HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 128 KGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
             + H DLKPEN++L         +K+ DFGL+     G E      GTP +VAPE+++ 
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNY 191
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATS- 239
               G  AD+WS GVI ++L++G  PF G+T   TL   ++A   EF   ++ +T A + 
Sbjct: 192 EPL-GLEADMWSIGVITYILLSGASPFLGDTKQETL-ANVSAVNYEFEDEYFSNTSALAK 249
Query: 240 -LIHKILDPNPKTRIRIEGIRKHPWFR 265
             I ++L  +PK R+ I+   +HPW +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 151/293 (51%), Gaps = 20/293 (6%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD------- 54
           KK+ +    Y   R +G G + +V   + +      A+KV+ KS   K R  D       
Sbjct: 29  KKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEK 88
Query: 55  ---QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDC 111
              +I  EIS++K + HPNI++L +V   +   Y++ EF  GGELF++I+++ +  E D 
Sbjct: 89  FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 112 RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD---SYGNLKVSDFGLSALPQQGVELLHT 168
               +Q++  + + H   + HRD+KPEN+LL+   S  N+K+ DFGLS+   +  + L  
Sbjct: 149 ANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRD 207
Query: 169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
             GT  Y+APEVL  +       DVWSCGVI+++L+ GY PFG  +   + KK+   ++ 
Sbjct: 208 RLGTAYYIAPEVLKKKY--NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265
Query: 229 CPF--W--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
             F  W   S  A  LI  +L  +   R   E      W +K  N +  S+++
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQK 318

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 147/267 (55%), Gaps = 9/267 (3%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  I
Sbjct: 35  QNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           ++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++   
Sbjct: 95  LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + HS  + +RDLKPENLL+D  G ++V+DFG +   +     L    GTP Y+APE++ 
Sbjct: 155 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---XGTPEYLAPEIIL 211
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
           ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+ 
Sbjct: 212 SKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 270
Query: 243 KILDPNPKTRI-----RIEGIRKHPWF 264
            +L  +   R       +  I+ H WF
Sbjct: 271 NLLQVDLTKRFGNLKNGVNDIKNHKWF 297

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 142/266 (53%), Gaps = 8/266 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +  +E  R +G+G+F KV  A+ +ETG+  A+KVL K  IL+   V+    E  I+ + R
Sbjct: 22  IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 68  -HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            HP + +L     +  +++ ++EFV GG+L   I    R  E   R Y  ++I A+   H
Sbjct: 82  NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            KG+ +RDLK +N+LLD  G+ K++DFG+            T CGTP+Y+APE+L    Y
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY 201
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            G A D W+ GV+L+ ++ G+ PF   +   L++ I   E   P W    AT ++   + 
Sbjct: 202 -GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMT 260
Query: 247 PNPKTRIRI------EGIRKHPWFRK 266
            NP  R+          I +HP+F++
Sbjct: 261 KNPTMRLGSLTQGGEHAILRHPFFKE 286

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 149/264 (56%), Gaps = 10/264 (3%)
Query: 11  YEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKH-RMVDQIKREISIMKIV 66
           +E+ R +G+G + KV   R      TG+  AMKVL K+ I+++ +     K E +I++ V
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           +HP IV L     +  K+Y+ILE+++GGELF ++  +G  +E+    Y  ++  A+ H H
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            KG+ +RDLKPEN++L+  G++K++DFGL         + HT CGT  Y+APE+L   G+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
           +  A D WS G +++ ++ G  PF   +      KI   + + P + +  A  L+ K+L 
Sbjct: 199 N-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 247 PNPKTRIRIEG-----IRKHPWFR 265
            N  +R+         ++ HP+FR
Sbjct: 258 RNAASRLGAGPGDAGEVQAHPFFR 281

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 151/272 (55%), Gaps = 21/272 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL--AKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG+G F+ VR   NRETG+  A+K++  AK T       + +KRE SI  +++H
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAH 124
           P+IV L E  +S   +Y++ EF+ G +L  +IV +        E     Y +Q+++A+ +
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CH   + HRD+KPEN+LL S  N   +K+ DFG++    +   +     GTP+++APEV+
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK-------KINAAEFSCPFWFS 234
               Y G   DVW CGVILF+L++G LPF  T    L++       K+N  ++S     S
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWS---HIS 260
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
             A  L+ ++L  +P  RI +     HPW ++
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 14  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 74  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 133
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y G A D W
Sbjct: 134 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWW 192
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 193 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 251

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y G A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWW 189
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 128/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y G A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWW 189
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 150/273 (54%), Gaps = 18/273 (6%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL-AKSTILKHRMVDQIK----REISIMK 64
           KY+    IG G  + VR   +R TG   A+K++   +  L    +++++    RE  I++
Sbjct: 95  KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 65  -IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
            +  HP+I+ L +   S + ++++ + +  GELFD +  +  L E + R   + L++AV+
Sbjct: 155 QVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS 214
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-- 181
             H+  + HRDLKPEN+LLD    +++SDFG S   + G E L   CGTP Y+APE+L  
Sbjct: 215 FLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKC 273
Query: 182 ----SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFWFST 235
               ++ GY G   D+W+CGVILF L+AG  PF       + + I     +FS P W   
Sbjct: 274 SMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDR 332
Query: 236 GAT--SLIHKILDPNPKTRIRIEGIRKHPWFRK 266
            +T   LI ++L  +P+ R+  E   +HP+F +
Sbjct: 333 SSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 151/286 (52%), Gaps = 30/286 (10%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR--------------- 51
           ++ +Y +   IG+G++  V+ A N       AMKVL+K  +++                 
Sbjct: 11  QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAP 70
Query: 52  --------MVDQIKREISIMKIVRHPNIVRLHEVL--ASRTKVYIILEFVTGGELFDKIV 101
                    ++Q+ +EI+I+K + HPN+V+L EVL   +   +Y++ E V  G + + + 
Sbjct: 71  GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VP 129
Query: 102 HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ 161
               L E+  R YFQ LI  + + H + + HRD+KP NLL+   G++K++DFG+S   + 
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 162 GVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY 219
              LL  T GTP ++APE LS   + + G A DVW+ GV L+  + G  PF +  +  L+
Sbjct: 190 SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLH 249
Query: 220 KKI--NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPW 263
            KI   A EF      +     LI ++LD NP++RI +  I+ HPW
Sbjct: 250 SKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score =  154 bits (390), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          +   CGTP Y+APEVL +  Y G A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWW 189
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  154 bits (389), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 148/264 (56%), Gaps = 10/264 (3%)
Query: 11  YEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKH-RMVDQIKREISIMKIV 66
           +E+ R +G+G + KV   R      TG+  AMKVL K+ I+++ +     K E +I++ V
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           +HP IV L     +  K+Y+ILE+++GGELF ++  +G  +E+    Y  ++  A+ H H
Sbjct: 79  KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            KG+ +RDLKPEN++L+  G++K++DFGL         + H  CGT  Y+APE+L   G+
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
           +  A D WS G +++ ++ G  PF   +      KI   + + P + +  A  L+ K+L 
Sbjct: 199 N-RAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLK 257
Query: 247 PNPKTRIRIEG-----IRKHPWFR 265
            N  +R+         ++ HP+FR
Sbjct: 258 RNAASRLGAGPGDAGEVQAHPFFR 281

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score =  154 bits (389), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 16  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 76  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 135
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          +   CGTP Y+APEVL +  Y G A D W
Sbjct: 136 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWW 194
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 195 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 253

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          +   CGTP Y+APEVL +  Y G A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWW 189
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 1/239 (0%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          +   CGTP Y+APEVL +  Y G A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY-GRAVDWW 189
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL 248

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score =  154 bits (389), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 18/265 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV   IG G+++  +   ++ T    A+K++ KS   K    ++I  EI +++  +HPN
Sbjct: 24  YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---KRDPTEEI--EI-LLRYGQHPN 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+ L +V      VY++ E + GGEL DKI+ Q    E +       +   V + H++GV
Sbjct: 78  IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 131 YHRDLKPENLL-LDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            HRDLKP N+L +D  GN   +++ DFG +   +    LL T C T N+VAPEVL  +GY
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 187 DGSAADVWSCGVILFVLMAGYLPF--GETDLP-TLYKKINAAEFSCP--FWFSTGATS-- 239
           D +A D+WS GV+L+ ++ GY PF  G  D P  +  +I + +FS    +W S   T+  
Sbjct: 198 D-AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWF 264
           L+ K+L  +P  R+    + +HPW 
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score =  154 bits (388), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 39/347 (11%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIV 66
           +  +++ R IG G++AKV   + ++T    AM+V+ K  +     +D ++ E  +  +  
Sbjct: 51  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            HP +V LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            +G+ +RDLK +N+LLDS G++K++D+G+     +  +   T CGTPNY+APE+L    Y
Sbjct: 171 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 187 DGSAADVWSCGVILFVLMAGYLPF---GETDLPT------LYKKINAAEFSCPFWFSTGA 237
            G + D W+ GV++F +MAG  PF   G +D P       L++ I   +   P   S  A
Sbjct: 231 -GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKA 289
Query: 238 TSLIHKILDPNPKTRI------RIEGIRKHPWFRK-NYN---------PVKCSEEEEVNL 281
            S++   L+ +PK R+          I+ HP+FR  +++         P K +   E  L
Sbjct: 290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGL 349
Query: 282 DDVHAVFDD-------IEDQYVAEQSENKVGG-----PLLMNAFEMI 316
           D+  + F +        +D  V +  +++  G     PLLM+A E +
Sbjct: 350 DNFDSQFTNEPVQLXPDDDDIVRKIDQSEFEGFEYINPLLMSAEECV 396

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 182/350 (52%), Gaps = 45/350 (12%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIV 66
           +  +++ R IG G++AKV   + ++T    AMKV+ K  +     +D ++ E  +  +  
Sbjct: 19  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            HP +V LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H
Sbjct: 79  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSN 183
            +G+ +RDLK +N+LLDS G++K++D+G+    ++G+    TT   CGTPNY+APE+L  
Sbjct: 139 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF---GETDLPT------LYKKINAAEFSCPFWFS 234
             Y G + D W+ GV++F +MAG  PF   G +D P       L++ I   +   P   S
Sbjct: 196 EDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMS 254
Query: 235 TGATSLIHKILDPNPKTRI------RIEGIRKHPWFRK-NYN---------PVKCSEEEE 278
             A S++   L+ +PK R+          I+ HP+FR  +++         P K +   E
Sbjct: 255 VKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGE 314
Query: 279 VNLDDVHAVFDD-------IEDQYVAEQSENKVGG-----PLLMNAFEMI 316
             LD+  + F +        +D  V +  +++  G     PLLM+A E +
Sbjct: 315 FGLDNFDSQFTNERVQLXPDDDDIVRKIDQSEFEGFEYINPLLMSAEECV 364

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score =  154 bits (388), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 141/267 (52%), Gaps = 1/267 (0%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R + +Y  GR +G+G FAK     + +T E  A KV+ KS +LK    +++  EI+I K 
Sbjct: 39  RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           + +P++V  H        VY++LE      L +    +  + E + R + +Q I  V + 
Sbjct: 99  LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H+  V HRDLK  NL L+   ++K+ DFGL+   +   E   T CGTPNY+APEVL  +G
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKG 218
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           +     D+WS G IL+ L+ G  PF  + L   Y +I   E+S P   +  A++LI ++L
Sbjct: 219 H-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVK 272
             +P  R  +  +    +F   Y P++
Sbjct: 278 HADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 182/350 (52%), Gaps = 45/350 (12%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIV 66
           +  +++ R IG G++AKV   + ++T    AMKV+ K  +     +D ++ E  +  +  
Sbjct: 4   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            HP +V LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H
Sbjct: 64  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSN 183
            +G+ +RDLK +N+LLDS G++K++D+G+    ++G+    TT   CGTPNY+APE+L  
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF---GETDLPT------LYKKINAAEFSCPFWFS 234
             Y G + D W+ GV++F +MAG  PF   G +D P       L++ I   +   P   S
Sbjct: 181 EDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 239
Query: 235 TGATSLIHKILDPNPKTRI------RIEGIRKHPWFRK-NYN---------PVKCSEEEE 278
             A S++   L+ +PK R+          I+ HP+FR  +++         P K +   E
Sbjct: 240 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGE 299
Query: 279 VNLDDVHAVFDD-------IEDQYVAEQSENKVGG-----PLLMNAFEMI 316
             LD+  + F +        +D  V +  +++  G     PLLM+A E +
Sbjct: 300 FGLDNFDSQFTNEPVQLXPDDDDIVRKIDQSEFEGFEYINPLLMSAEESV 349

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score =  153 bits (387), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++E  + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP
Sbjct: 152 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 211
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-K 128
            +  L     +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K
Sbjct: 212 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V +RDLK ENL+LD  G++K++DFGL     +    + T CGTP Y+APEVL +  Y G
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY-G 330
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            A D W  GV+++ +M G LPF   D   L++ I   E   P      A SL+  +L  +
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 390
Query: 249 PKTRI 253
           PK R+
Sbjct: 391 PKQRL 395

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 18/264 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y V  TIG G++++ +   ++ T    A+KV+ KS   K    ++I  EI +++  +HPN
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEI--EI-LLRYGQHPN 82
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+ L +V      VY++ E + GGEL DKI+ Q    E +       +   V + HS+GV
Sbjct: 83  IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 131 YHRDLKPENLL-LDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            HRDLKP N+L +D  GN   L++ DFG +   +    LL T C T N+VAPEVL  +GY
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 187 DGSAADVWSCGVILFVLMAGYLPF--GETDLP-TLYKKINAAEF--SCPFW--FSTGATS 239
           D    D+WS G++L+ ++AGY PF  G +D P  +  +I + +F  S   W   S  A  
Sbjct: 203 D-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 240 LIHKILDPNPKTRIRIEGIRKHPW 263
           L+ K+L  +P  R+  + + +HPW
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPW 285

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 132/245 (53%), Gaps = 2/245 (0%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++E  + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 208
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-K 128
            +  L     +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K
Sbjct: 209 FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 268
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V +RDLK ENL+LD  G++K++DFGL     +    + T CGTP Y+APEVL +  Y G
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY-G 327
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            A D W  GV+++ +M G LPF   D   L++ I   E   P      A SL+  +L  +
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 387
Query: 249 PKTRI 253
           PK R+
Sbjct: 388 PKQRL 392

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  153 bits (386), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 147/264 (55%), Gaps = 18/264 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y V  TIG G++++ +   ++ T    A+KV+ KS   K    ++I  EI +++  +HPN
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEI--EI-LLRYGQHPN 82
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+ L +V      VY++ E + GGEL DKI+ Q    E +       +   V + HS+GV
Sbjct: 83  IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 131 YHRDLKPENLL-LDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            HRDLKP N+L +D  GN   L++ DFG +   +    LL T C T N+VAPEVL  +GY
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGY 202
Query: 187 DGSAADVWSCGVILFVLMAGYLPF--GETDLP-TLYKKINAAEF--SCPFW--FSTGATS 239
           D    D+WS G++L+ ++AGY PF  G +D P  +  +I + +F  S   W   S  A  
Sbjct: 203 D-EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 240 LIHKILDPNPKTRIRIEGIRKHPW 263
           L+ K+L  +P  R+  + + +HPW
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPW 285

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 153/277 (55%), Gaps = 23/277 (8%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIV 66
           +  +++ R IG G++AKV   + ++T    AMKV+ K  +     +D ++ E  +  +  
Sbjct: 8   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            HP +V LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSN 183
            +G+ +RDLK +N+LLDS G++K++D+G+    ++G+    TT   CGTPNY+APE+L  
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMC---KEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF---GETDLPT------LYKKINAAEFSCPFWFS 234
             Y G + D W+ GV++F +MAG  PF   G +D P       L++ I   +   P   S
Sbjct: 185 EDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 243
Query: 235 TGATSLIHKILDPNPKTRI------RIEGIRKHPWFR 265
             A S++   L+ +PK R+          I+ HP+FR
Sbjct: 244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score =  152 bits (383), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R + +Y  GR +G+G FAK     + +T E  A KV+ KS +LK    +++  EI+I K 
Sbjct: 23  RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           + +P++V  H        VY++LE      L +    +  + E + R + +Q I  V + 
Sbjct: 83  LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H+  V HRDLK  NL L+   ++K+ DFGL+   +   E     CGTPNY+APEVL  +G
Sbjct: 143 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           +     D+WS G IL+ L+ G  PF  + L   Y +I   E+S P   +  A++LI ++L
Sbjct: 203 H-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 261
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVK 272
             +P  R  +  +    +F   Y P++
Sbjct: 262 HADPTLRPSVAELLTDEFFTSGYAPMR 288

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R + +Y  GR +G+G FAK     + +T E  A KV+ KS +LK    +++  EI+I K 
Sbjct: 39  RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           + +P++V  H        VY++LE      L +    +  + E + R + +Q I  V + 
Sbjct: 99  LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H+  V HRDLK  NL L+   ++K+ DFGL+   +   E     CGTPNY+APEVL  +G
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKG 218
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           +     D+WS G IL+ L+ G  PF  + L   Y +I   E+S P   +  A++LI ++L
Sbjct: 219 H-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVK 272
             +P  R  +  +    +F   Y P++
Sbjct: 278 HADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/267 (32%), Positives = 140/267 (52%), Gaps = 1/267 (0%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R + +Y  GR +G+G FAK     + +T E  A KV+ KS +LK    +++  EI+I K 
Sbjct: 39  RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           + +P++V  H        VY++LE      L +    +  + E + R + +Q I  V + 
Sbjct: 99  LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H+  V HRDLK  NL L+   ++K+ DFGL+   +   E     CGTPNY+APEVL  +G
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKG 218
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           +     D+WS G IL+ L+ G  PF  + L   Y +I   E+S P   +  A++LI ++L
Sbjct: 219 H-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASALIRRML 277
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVK 272
             +P  R  +  +    +F   Y P++
Sbjct: 278 HADPTLRPSVAELLTDEFFTSGYAPMR 304

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 144/265 (54%), Gaps = 18/265 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV   IG G+++  +   ++ T    A+K++ KS   K    ++I  EI +++  +HPN
Sbjct: 24  YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS---KRDPTEEI--EI-LLRYGQHPN 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+ L +V      VY++ E   GGEL DKI+ Q    E +       +   V + H++GV
Sbjct: 78  IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 131 YHRDLKPENLL-LDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            HRDLKP N+L +D  GN   +++ DFG +   +    LL T C T N+VAPEVL  +GY
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGY 197
Query: 187 DGSAADVWSCGVILFVLMAGYLPF--GETDLP-TLYKKINAAEFSCP--FWFSTGATS-- 239
           D +A D+WS GV+L+  + GY PF  G  D P  +  +I + +FS    +W S   T+  
Sbjct: 198 D-AACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 240 LIHKILDPNPKTRIRIEGIRKHPWF 264
           L+ K L  +P  R+    + +HPW 
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score =  151 bits (381), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 131/245 (53%), Gaps = 2/245 (0%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++E  + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP
Sbjct: 10  EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 69
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-K 128
            +  L     +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K
Sbjct: 70  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 129
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V +RDLK ENL+LD  G++K++DFGL     +    +   CGTP Y+APEVL +  Y G
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY-G 188
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            A D W  GV+++ +M G LPF   D   L++ I   E   P      A SL+  +L  +
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 248
Query: 249 PKTRI 253
           PK R+
Sbjct: 249 PKQRL 253

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score =  150 bits (380), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 131/245 (53%), Gaps = 2/245 (0%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++E  + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP
Sbjct: 9   EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 68
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-K 128
            +  L     +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K
Sbjct: 69  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 128
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V +RDLK ENL+LD  G++K++DFGL     +    +   CGTP Y+APEVL +  Y G
Sbjct: 129 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY-G 187
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            A D W  GV+++ +M G LPF   D   L++ I   E   P      A SL+  +L  +
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 247
Query: 249 PKTRI 253
           PK R+
Sbjct: 248 PKQRL 252

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score =  150 bits (380), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 131/245 (53%), Gaps = 2/245 (0%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++E  + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP
Sbjct: 11  EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHP 70
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-K 128
            +  L     +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K
Sbjct: 71  FLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 130
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V +RDLK ENL+LD  G++K++DFGL     +    +   CGTP Y+APEVL +  Y G
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDY-G 189
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            A D W  GV+++ +M G LPF   D   L++ I   E   P      A SL+  +L  +
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKD 249
Query: 249 PKTRI 253
           PK R+
Sbjct: 250 PKQRL 254

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  147 bits (372), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 148/272 (54%), Gaps = 21/272 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL--AKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG+G F+ VR   NRETG+  A+K++  AK T       + +KRE SI  +++H
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAH 124
           P+IV L E  +S   +Y++ EF+ G +L  +IV +        E     Y +Q+++A+ +
Sbjct: 86  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CH   + HRD+KP  +LL S  N   +K+  FG++    +   +     GTP+++APEV+
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK-------KINAAEFSCPFWFS 234
               Y G   DVW CGVILF+L++G LPF  T    L++       K+N  ++S     S
Sbjct: 206 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWS---HIS 260
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
             A  L+ ++L  +P  RI +     HPW ++
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  147 bits (372), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 148/272 (54%), Gaps = 21/272 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL--AKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG+G F+ VR   NRETG+  A+K++  AK T       + +KRE SI  +++H
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAH 124
           P+IV L E  +S   +Y++ EF+ G +L  +IV +        E     Y +Q+++A+ +
Sbjct: 88  PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 125 CHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           CH   + HRD+KP  +LL S  N   +K+  FG++    +   +     GTP+++APEV+
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK-------KINAAEFSCPFWFS 234
               Y G   DVW CGVILF+L++G LPF  T    L++       K+N  ++S     S
Sbjct: 208 KREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWS---HIS 262
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
             A  L+ ++L  +P  RI +     HPW ++
Sbjct: 263 ESAKDLVRRMLMLDPAERITVYEALNHPWLKE 294

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G FAK     + +T E  A K++ KS +LK    +++  EISI + + H ++V  H 
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  V+++LE      L +    +  L E + R Y +Q++    + H   V HRDLK
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             NL L+    +K+ DFGL+   +   E   T CGTPNY+APEVLS +G+     DVWS 
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVDVWSI 203
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+L  +P  R  I 
Sbjct: 204 GCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTIN 263
Query: 257 GIRKHPWFRKNYNPVK 272
            +    +F   Y P +
Sbjct: 264 ELLNDEFFTSGYIPAR 279

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G FAK     + +T E  A K++ KS +LK    +++  EISI + + H ++V  H 
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  V+++LE      L +    +  L E + R Y +Q++    + H   V HRDLK
Sbjct: 85  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             NL L+    +K+ DFGL+   +   E   T CGTPNY+APEVLS +G+     DVWS 
Sbjct: 145 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVDVWSI 203
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+L  +P  R  I 
Sbjct: 204 GCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTIN 263
Query: 257 GIRKHPWFRKNYNPVK 272
            +    +F   Y P +
Sbjct: 264 ELLNDEFFTSGYIPAR 279

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 131/256 (51%), Gaps = 1/256 (0%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G FAK     + +T E  A K++ KS +LK    +++  EISI + + H ++V  H 
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  V+++LE      L +    +  L E + R Y +Q++    + H   V HRDLK
Sbjct: 89  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             NL L+    +K+ DFGL+   +   E   T CGTPNY+APEVLS +G+     DVWS 
Sbjct: 149 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH-SFEVDVWSI 207
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+L  +P  R  I 
Sbjct: 208 GCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTIN 267
Query: 257 GIRKHPWFRKNYNPVK 272
            +    +F   Y P +
Sbjct: 268 ELLNDEFFTSGYIPAR 283

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G FAK     + +T E  A K++ KS +LK    +++  EISI + + H ++V  H 
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  V+++LE      L +    +  L E + R Y +Q++    + H   V HRDLK
Sbjct: 83  FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             NL L+    +K+ DFGL+   +   E     CGTPNY+APEVLS +G+     DVWS 
Sbjct: 143 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVDVWSI 201
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+L  +P  R  I 
Sbjct: 202 GCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTIN 261
Query: 257 GIRKHPWFRKNYNPVK 272
            +    +F   Y P +
Sbjct: 262 ELLNDEFFTSGYIPAR 277

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G FAK     + +T E  A K++ KS +LK    +++  EISI + + H ++V  H 
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  V+++LE      L +    +  L E + R Y +Q++    + H   V HRDLK
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             NL L+    +K+ DFGL+   +   E     CGTPNY+APEVLS +G+     DVWS 
Sbjct: 167 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVDVWSI 225
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+L  +P  R  I 
Sbjct: 226 GCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTIN 285
Query: 257 GIRKHPWFRKNYNPVK 272
            +    +F   Y P +
Sbjct: 286 ELLNDEFFTSGYIPAR 301

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score =  145 bits (366), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 162/313 (51%), Gaps = 6/313 (1%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++  +E+ + +G+G+F KV  A+ ++T +  A+K L K  +L    V+    E  ++ + 
Sbjct: 16  KIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 75
Query: 67  -RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
             HP +  +     ++  ++ ++E++ GG+L   I    +   +    Y  ++I  +   
Sbjct: 76  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HSKG+ +RDLK +N+LLD  G++K++DFG+      G    +  CGTP+Y+APE+L  + 
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK 195
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           Y+ S  D WS GV+L+ ++ G  PF   D   L+  I       P W    A  L+ K+ 
Sbjct: 196 YNHS-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF 254
Query: 246 DPNPKTRIRIEG-IRKHPWFRK-NYNPVKCSEEEEVNLDDVHAVFD--DIEDQYVAEQSE 301
              P+ R+ + G IR+HP FR+ N+  ++  E +      V + FD  + + +++ E+  
Sbjct: 255 VREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPR 314
Query: 302 NKVGGPLLMNAFE 314
                  L+N+ +
Sbjct: 315 LXFADRALINSMD 327

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score =  145 bits (365), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G FAK     + +T E  A K++ KS +LK    +++  EISI + + H ++V  H 
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                  V+++LE      L +    +  L E + R Y +Q++    + H   V HRDLK
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             NL L+    +K+ DFGL+   +   E     CGTPNY+APEVLS +G+     DVWS 
Sbjct: 169 LGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH-SFEVDVWSI 227
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
           G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+L  +P  R  I 
Sbjct: 228 GCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTIN 287
Query: 257 GIRKHPWFRKNYNPVK 272
            +    +F   Y P +
Sbjct: 288 ELLNDEFFTSGYIPAR 303

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  144 bits (364), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 143/269 (53%), Gaps = 9/269 (3%)
Query: 4   QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           + +R   ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 62
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
             + HP  V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ 
Sbjct: 63  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 122
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVL 181
           + H KG+ HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 182
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           + +     ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+
Sbjct: 183 TEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV 241
Query: 242 HKILDPNPKTRI---RIEG---IRKHPWF 264
            K+L  +   R+    +EG   ++ HP+F
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 270

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  144 bits (364), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 143/269 (53%), Gaps = 9/269 (3%)
Query: 4   QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           + +R   ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M
Sbjct: 4   RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 63
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
             + HP  V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ 
Sbjct: 64  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 123
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVL 181
           + H KG+ HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L
Sbjct: 124 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 183
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           + +     ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+
Sbjct: 184 TEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV 242
Query: 242 HKILDPNPKTRI---RIEG---IRKHPWF 264
            K+L  +   R+    +EG   ++ HP+F
Sbjct: 243 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 271

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  144 bits (363), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 143/269 (53%), Gaps = 9/269 (3%)
Query: 4   QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           + +R   ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M
Sbjct: 2   RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 61
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
             + HP  V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ 
Sbjct: 62  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVL 181
           + H KG+ HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           + +     ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+
Sbjct: 182 TEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV 240
Query: 242 HKILDPNPKTRI---RIEG---IRKHPWF 264
            K+L  +   R+    +EG   ++ HP+F
Sbjct: 241 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 269

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  144 bits (363), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 143/269 (53%), Gaps = 9/269 (3%)
Query: 4   QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           + +R   ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M
Sbjct: 5   RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 64
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
             + HP  V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ 
Sbjct: 65  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 124
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVL 181
           + H KG+ HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L
Sbjct: 125 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 184
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           + +     ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+
Sbjct: 185 TEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV 243
Query: 242 HKILDPNPKTRI---RIEG---IRKHPWF 264
            K+L  +   R+    +EG   ++ HP+F
Sbjct: 244 EKLLVLDATKRLGCEEMEGYGPLKAHPFF 272

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  144 bits (363), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 141/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 91  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      ++  GT  YV+PE+L+ +    
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS-AC 209
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFF 291

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 163/296 (55%), Gaps = 30/296 (10%)
Query: 8   VAKYEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTIL-KHRMVDQIKREISIM 63
           +  +E+ + +G G + KV   R     +TG+  AMKVL K+TI+ K +  +  + E  ++
Sbjct: 53  IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 64  KIVRH-PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           + +R  P +V LH    + TK+++IL+++ GGELF  +  + R  E++ + Y  +++ A+
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 172
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVL 181
            H H  G+ +RD+K EN+LLDS G++ ++DFGLS        E  +  CGT  Y+AP+++
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 182 --SNRGYDGSAADVWSCGVILFVLMAGYLPF---GETDLPT-LYKKINAAEFSCPFWFST 235
              + G+D  A D WS GV+++ L+ G  PF   GE +    + ++I  +E   P   S 
Sbjct: 233 RGGDSGHD-KAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSA 291
Query: 236 GATSLIHKILDPNPKTRI-----RIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHA 286
            A  LI ++L  +PK R+       + I++H +F+K            +N DD+ A
Sbjct: 292 LAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK------------INWDDLAA 335

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 91  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS-AC 209
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 269
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 270 ATKRLGCEEMEGYGPLKAHPFF 291

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 141/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 95  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      ++  GT  YV+PE+L+ +    
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACK 214
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 215 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFF 295

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 76  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKS-AC 194
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 254
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 255 ATKRLGCEEMEGYGPLKAHPFF 276

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACK 211
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 212 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFF 292

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXK 213
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   ++ KI   E+  P  F   A  L+ K+L  +
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 97  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 216
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 217 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLD 275
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 276 ATKRLGCEEMEGYGPLKAHPFF 297

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFF 294

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 212 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFF 292

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  142 bits (359), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 212 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFF 292

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 161/313 (51%), Gaps = 6/313 (1%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++  + + + +G+G+F KV  A+ ++T +  A+K L K  +L    V+    E  ++ + 
Sbjct: 15  KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA 74
Query: 67  -RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
             HP +  +     ++  ++ ++E++ GG+L   I    +   +    Y  ++I  +   
Sbjct: 75  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 134
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HSKG+ +RDLK +N+LLD  G++K++DFG+      G    +  CGTP+Y+APE+L  + 
Sbjct: 135 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK 194
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           Y+ S  D WS GV+L+ ++ G  PF   D   L+  I       P W    A  L+ K+ 
Sbjct: 195 YNHS-VDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF 253
Query: 246 DPNPKTRIRIEG-IRKHPWFRK-NYNPVKCSEEEEVNLDDVHAVFD--DIEDQYVAEQSE 301
              P+ R+ + G IR+HP FR+ N+  ++  E +      V + FD  + + +++ E+  
Sbjct: 254 VREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPR 313
Query: 302 NKVGGPLLMNAFE 314
                  L+N+ +
Sbjct: 314 LSFADRALINSMD 326

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFF 294

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 95  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 214
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 215 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 273
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 274 ATKRLGCEEMEGYGPLKAHPFF 295

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score =  142 bits (357), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 99  FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 218
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 219 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 277
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 278 ATKRLGCEEMEGYGPLKAHPFF 299

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  142 bits (357), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 213
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   ++ KI   E+  P  F   A  L+ K+L  +
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFF 294

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 24/278 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM-VDQIKREISIMKIVRHP 69
           Y++   +G G F  V     R TG + A    AK  +  H    + +++EI  M ++RHP
Sbjct: 53  YDIHEELGTGAFGVVHRVTERATGNNFA----AKFVMTPHESDKETVRKEIQTMSVLRHP 108
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSK 128
            +V LH+      ++ +I EF++GGELF+K+  +  ++ E++   Y +Q+   + H H  
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 129 GVYHRDLKPENLLLDS--YGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNR 184
              H DLKPEN++  +     LK+ DFGL+A   P+Q V++   T GT  + APEV   +
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEGK 225
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK------KINAAEFSCPFWFSTGA 237
              G   D+WS GV+ ++L++G  PF GE D  TL         ++ + FS     S   
Sbjct: 226 PV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG---ISEDG 281
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              I K+L  +P TR+ I    +HPW      P + S+
Sbjct: 282 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQ 319

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 2/217 (0%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KI 65
           + + +   + IG+G+F KV  A+++      A+KVL K  ILK +    I  E +++ K 
Sbjct: 36  KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           V+HP +V LH    +  K+Y +L+++ GGELF  +  +   LE   R Y  ++  A+ + 
Sbjct: 96  VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HS  + +RDLKPEN+LLDS G++ ++DFGL     +      T CGTP Y+APEVL  + 
Sbjct: 156 HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
           YD +  D W  G +L+ ++ G  PF   +   +Y  I
Sbjct: 216 YDRT-VDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 159/304 (52%), Gaps = 17/304 (5%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +   Y+V + IG G F +V+  +++ + +  AMK+L+K  ++K         E  IM   
Sbjct: 73  KAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             P +V+L         +Y+++E++ GG+L + ++    + E   + Y  +++ A+   H
Sbjct: 133 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIH 191
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNR- 184
           S G+ HRD+KP+N+LLD +G+LK++DFG    + + G+    T  GTP+Y++PEVL ++ 
Sbjct: 192 SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 185 --GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFWFSTGAT 238
             GY G   D WS GV LF ++ G  PF    L   Y KI    N+  F      S  A 
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAK 311
Query: 239 SLIHKILDPNPK--TRIRIEGIRKHPWFRK---NYNPVKCSEE---EEVNLDDVHAVFDD 290
           +LI   L        R  +E I++HP+F+    N++ ++ +      E++ D   + FDD
Sbjct: 312 NLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDD 371
Query: 291 IEDQ 294
           IED 
Sbjct: 372 IEDD 375

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 142/278 (51%), Gaps = 24/278 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM-VDQIKREISIMKIVRHP 69
           Y++   +G G F  V     R TG + A    AK  +  H    + +++EI  M ++RHP
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFA----AKFVMTPHESDKETVRKEIQTMSVLRHP 214
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSK 128
            +V LH+      ++ +I EF++GGELF+K+  +  ++ E++   Y +Q+   + H H  
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 129 GVYHRDLKPENLLLDS--YGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNR 184
              H DLKPEN++  +     LK+ DFGL+A   P+Q V++   T GT  + APEV   +
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV---TTGTAEFAAPEVAEGK 331
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK------KINAAEFSCPFWFSTGA 237
              G   D+WS GV+ ++L++G  PF GE D  TL         ++ + FS     S   
Sbjct: 332 PV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSG---ISEDG 387
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              I K+L  +P TR+ I    +HPW      P + S+
Sbjct: 388 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQ 425

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 139/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+    A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 92  FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      +   GT  YV+PE+L+ +    
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACK 211
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 212 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 270
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 271 ATKRLGCEEMEGYGPLKAHPFF 292

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score =  140 bits (354), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 143/273 (52%), Gaps = 19/273 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL------AKSTILKHRMVDQIKREISIM- 63
           YE    +G G  + VR   ++ T +  A+K++      + S      + +   +E+ I+ 
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
           K+  HPNI++L +   + T  +++ + +  GELFD +  +  L E + R+  + L++ + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-- 181
             H   + HRDLKPEN+LLD   N+K++DFG S     G E L + CGTP+Y+APE++  
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLRSVCGTPSYLAPEIIEC 197
Query: 182 ----SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
               ++ GY G   D+WS GVI++ L+AG  PF       + + I +   +F  P W  +
Sbjct: 198 SMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 256
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
           S     L+ + L   P+ R   E    HP+F++
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score =  140 bits (354), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 140/262 (53%), Gaps = 9/262 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M  + HP 
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
            V+L+       K+Y  L +   G L   I   G   E   R Y  +++ A+ + H KG+
Sbjct: 94  FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            HRDLKPEN+LL+   +++++DFG + +  P+      ++  GT  YV+PE+L+ +    
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASK 213
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           S +D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+ K+L  +
Sbjct: 214 S-SDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLD 272
Query: 249 PKTRI---RIEG---IRKHPWF 264
              R+    +EG   ++ HP+F
Sbjct: 273 ATKRLGCEEMEGYGPLKAHPFF 294

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 19/273 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL------AKSTILKHRMVDQIKREISIM- 63
           YE    +G G  + VR   ++ T +  A+K++      + S      + +   +E+ I+ 
Sbjct: 6   YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
           K+  HPNI++L +   + T  +++ + +  GELFD +  +  L E + R+  + L++ + 
Sbjct: 66  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 125
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-- 181
             H   + HRDLKPEN+LLD   N+K++DFG S     G E L   CGTP+Y+APE++  
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIEC 184
Query: 182 ----SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
               ++ GY G   D+WS GVI++ L+AG  PF       + + I +   +F  P W  +
Sbjct: 185 SMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 243
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
           S     L+ + L   P+ R   E    HP+F++
Sbjct: 244 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 142/273 (52%), Gaps = 19/273 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVL------AKSTILKHRMVDQIKREISIM- 63
           YE    +G G  + VR   ++ T +  A+K++      + S      + +   +E+ I+ 
Sbjct: 19  YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
           K+  HPNI++L +   + T  +++ + +  GELFD +  +  L E + R+  + L++ + 
Sbjct: 79  KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-- 181
             H   + HRDLKPEN+LLD   N+K++DFG S     G E L   CGTP+Y+APE++  
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIEC 197
Query: 182 ----SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
               ++ GY G   D+WS GVI++ L+AG  PF       + + I +   +F  P W  +
Sbjct: 198 SMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 256
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
           S     L+ + L   P+ R   E    HP+F++
Sbjct: 257 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 150/276 (54%), Gaps = 9/276 (3%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD-QIKREISIM 63
            + + KY +G  +GEG++ KV+   + ET    A+K+L K  + +    +  +K+EI ++
Sbjct: 1   AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 64  KIVRHPNIVRLHEVLAS--RTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLI 119
           + +RH N+++L +VL +  + K+Y+++E+   G  E+ D +  + R        YF QLI
Sbjct: 61  RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLI 119
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVA 177
           D + + HS+G+ H+D+KP NLLL + G LK+S  G++    P    +   T+ G+P +  
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 178 PEVLSN-RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTG 236
           PE+ +    + G   D+WS GV L+ +  G  PF   ++  L++ I    ++ P      
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
            + L+  +L+  P  R  I  IR+H WFRK + P +
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAE 275

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 139/257 (54%), Gaps = 7/257 (2%)
Query: 16  TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRL 74
            +G+G+F KV  A  + T E  A+K+L K  +++   V+    E  ++ ++ + P + +L
Sbjct: 26  VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           H    +  ++Y ++E+V GG+L   I   G+  E     Y  ++   +   H +G+ +RD
Sbjct: 86  HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRD 145
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LK +N++LDS G++K++DFG+              CGTP+Y+APE+++ + Y G + D W
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPY-GKSVDWW 204
Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIR 254
           + GV+L+ ++AG  PF   D   L++ I     S P   S  A S+   ++  +P  R+ 
Sbjct: 205 AYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLG 264
Query: 255 I--EG---IRKHPWFRK 266
              EG   +R+H +FR+
Sbjct: 265 CGPEGERDVREHAFFRR 281

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 11/271 (4%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +   YEV + IG G F +V+  +++ T +  AMK+L+K  ++K         E  IM   
Sbjct: 72  KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             P +V+L         +Y+++E++ GG+L + ++    + E   R Y  +++ A+   H
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNR- 184
           S G  HRD+KP+N+LLD  G+LK++DFG    + ++G+    T  GTP+Y++PEVL ++ 
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 185 --GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFWFSTGAT 238
             GY G   D WS GV L+ ++ G  PF    L   Y KI    N+  F      S  A 
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 310
Query: 239 SLIHKILDPNPK--TRIRIEGIRKHPWFRKN 267
           +LI   L        R  +E I++H +F+ +
Sbjct: 311 NLICAFLTDREVRLGRNGVEEIKRHLFFKND 341

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 11/271 (4%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +   YEV + IG G F +V+  +++ T +  AMK+L+K  ++K         E  IM   
Sbjct: 67  KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 126
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             P +V+L         +Y+++E++ GG+L + ++    + E   R Y  +++ A+   H
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNR- 184
           S G  HRD+KP+N+LLD  G+LK++DFG    + ++G+    T  GTP+Y++PEVL ++ 
Sbjct: 186 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 185 --GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFWFSTGAT 238
             GY G   D WS GV L+ ++ G  PF    L   Y KI    N+  F      S  A 
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 305
Query: 239 SLIHKILDPNPK--TRIRIEGIRKHPWFRKN 267
           +LI   L        R  +E I++H +F+ +
Sbjct: 306 NLICAFLTDREVRLGRNGVEEIKRHLFFKND 336

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 141/271 (52%), Gaps = 11/271 (4%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           +   YEV + IG G F +V+  +++ T +  AMK+L+K  ++K         E  IM   
Sbjct: 72  KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
             P +V+L         +Y+++E++ GG+L + ++    + E   R Y  +++ A+   H
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNR- 184
           S G  HRD+KP+N+LLD  G+LK++DFG    + ++G+    T  GTP+Y++PEVL ++ 
Sbjct: 191 SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 185 --GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI----NAAEFSCPFWFSTGAT 238
             GY G   D WS GV L+ ++ G  PF    L   Y KI    N+  F      S  A 
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAK 310
Query: 239 SLIHKILDPNPK--TRIRIEGIRKHPWFRKN 267
           +LI   L        R  +E I++H +F+ +
Sbjct: 311 NLICAFLTDREVRLGRNGVEEIKRHLFFKND 341

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 138/255 (54%), Gaps = 7/255 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLH 75
           +G+G+F KV  ++ + T E  A+K+L K  +++   V+    E  ++ +  + P + +LH
Sbjct: 28  LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
               +  ++Y ++E+V GG+L   I   GR  E     Y  ++   +    SKG+ +RDL
Sbjct: 88  SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           K +N++LDS G++K++DFG+              CGTP+Y+APE+++ + Y G + D W+
Sbjct: 148 KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVDWWA 206
Query: 196 CGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI 255
            GV+L+ ++AG  PF   D   L++ I     + P   S  A ++   ++  +P  R+  
Sbjct: 207 FGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 266
Query: 256 --EG---IRKHPWFR 265
             EG   I++H +FR
Sbjct: 267 GPEGERDIKEHAFFR 281

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 136/264 (51%), Gaps = 19/264 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G G F  V   + R +G    +K + K        ++QI+ EI ++K + HPNI+++
Sbjct: 28  RKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGR---LLENDCRRYFQQLIDAVAHCHSKGV 130
            EV      +YI++E   GGEL ++IV  Q R   L E       +Q+++A+A+ HS+ V
Sbjct: 86  FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 131 YHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            H+DLKPEN+L      +  +K+ DFGL+ L +   E      GT  Y+APEV       
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVFKRDV-- 202
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTL-----YKKINAAEFSCPFWFSTGATSLIH 242
               D+WS GV+++ L+ G LPF  T L  +     YK+ N A    P   +  A  L+ 
Sbjct: 203 TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP--LTPQAVDLLK 260
Query: 243 KILDPNPKTRIRIEGIRKHPWFRK 266
           ++L  +P+ R     +  H WF++
Sbjct: 261 QMLTKDPERRPSAAQVLHHEWFKQ 284

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 139/266 (52%), Gaps = 20/266 (7%)
Query: 11  YEVGRT--IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           Y V +T  +G G F +V   +   TG  +A K++ K+  +K +  +++K EIS+M  + H
Sbjct: 89  YTVSKTEILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKDK--EEVKNEISVMNQLDH 145
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHS 127
            N+++L++   S+  + +++E+V GGELFD+I+ +   L E D   + +Q+ + + H H 
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ 205
Query: 128 KGVYHRDLKPENLLL--DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
             + H DLKPEN+L        +K+ DFGL A   +  E L    GTP ++APEV+ N  
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGL-ARRYKPREKLKVNFGTPEFLAPEVV-NYD 263
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK------KINAAEFSCPFWFSTGAT 238
           +     D+WS GVI ++L++G  PF G+ D  TL         +   EF      S  A 
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD---ISEEAK 320
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWF 264
             I K+L      RI      KHPW 
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWL 346

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 18/277 (6%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           KQ      Y++   +G G F  V     + TG     K +     L    V   K EISI
Sbjct: 45  KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISI 101
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDA 121
           M  + HP ++ LH+    + ++ +ILEF++GGELFD+I  +  ++ E +   Y +Q  + 
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 122 VAHCHSKGVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           + H H   + H D+KPEN++ ++    ++K+ DFGL A      E++  T  T  + APE
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL-ATKLNPDEIVKVTTATAEFAAPE 220
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK------KINAAEFSCPFW 232
           ++ +R   G   D+W+ GV+ +VL++G  PF GE DL TL        + +   FS    
Sbjct: 221 IV-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSS--- 276
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN 269
            S  A   I  +L   P+ R+ +    +HPW + +++
Sbjct: 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 138/255 (54%), Gaps = 7/255 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLH 75
           +G+G+F KV  ++ + T E  A+K+L K  +++   V+    E  ++ +  + P + +LH
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
               +  ++Y ++E+V GG+L   I   GR  E     Y  ++   +    SKG+ +RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           K +N++LDS G++K++DFG+              CGTP+Y+APE+++ + Y G + D W+
Sbjct: 469 KLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY-GKSVDWWA 527
Query: 196 CGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRI 255
            GV+L+ ++AG  PF   D   L++ I     + P   S  A ++   ++  +P  R+  
Sbjct: 528 FGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 587
Query: 256 --EG---IRKHPWFR 265
             EG   I++H +FR
Sbjct: 588 GPEGERDIKEHAFFR 602

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 134/254 (52%), Gaps = 5/254 (1%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + KY   + IGEG+F K    ++ E G    +K +  S  +  +  ++ +RE++++  ++
Sbjct: 23  MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMK 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDAVAHC 125
           HPNIV+  E       +YI++++  GG+LF +I  Q  +L  E+    +F Q+  A+ H 
Sbjct: 82  HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H + + HRD+K +N+ L   G +++ DFG++ +    VEL     GTP Y++PE+  N+ 
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHKI 244
           Y+ + +D+W+ G +L+ L      F    +  L  KI +  F      +S    SL+ ++
Sbjct: 202 YN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL 260
Query: 245 LDPNPKTRIRIEGI 258
              NP+ R  +  I
Sbjct: 261 FKRNPRDRPSVNSI 274

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 141/269 (52%), Gaps = 23/269 (8%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKIVRH- 68
             + +G G FA VR   ++ TG+  A K L K    + R  D   +I  EI+++++ +  
Sbjct: 33  TSKELGRGKFAVVRQCISKSTGQEYAAKFLKK----RRRGQDCRAEILHEIAVLELAKSC 88
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCH 126
           P ++ LHEV  + +++ +ILE+  GGE+F   + +    + END  R  +Q+++ V + H
Sbjct: 89  PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 127 SKGVYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
              + H DLKP+N+LL S    G++K+ DFG+S       E L    GTP Y+APE+L+ 
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEYLAPEILN- 206
Query: 184 RGYD--GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA--AEFSCPFWFSTG--A 237
             YD   +A D+W+ G+I ++L+    PF   D    Y  I+    ++S   + S    A
Sbjct: 207 --YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLA 264
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
           T  I  +L  NP+ R   E    H W ++
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 137/260 (52%), Gaps = 9/260 (3%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ R IG+G+F KV   Q  +T +  AMK + K   ++   V  + +E+ IM+ + HP 
Sbjct: 17  FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V L         ++++++ + GG+L   +       E   + +  +L+ A+ +  ++ +
Sbjct: 77  LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR---GYD 187
            HRD+KP+N+LLD +G++ ++DF ++A+  +  ++  T  GT  Y+APE+ S+R   GY 
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQIT-TMAGTKPYMAPEMFSSRKGAGY- 194
Query: 188 GSAADVWSCGVILFVLMAGYLPF---GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
             A D WS GV  + L+ G  P+     T    +         + P  +S    SL+ K+
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKL 254
Query: 245 LDPNPKTRI-RIEGIRKHPW 263
           L+PNP  R  ++  ++  P+
Sbjct: 255 LEPNPDQRFSQLSDVQNFPY 274

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score =  127 bits (320), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 138/267 (51%), Gaps = 19/267 (7%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGE-SVAMKVLAKSTILKHR-MVDQIKREISIMKIV 66
           A+Y +G  +G+G F  V FA +R T    VA+KV+ ++ +L    + D +   + +  + 
Sbjct: 31  AEYRLGPLLGKGGFGTV-FAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLW 89
Query: 67  R------HPNIVRLHEVLASRTKVYIILE-FVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +      HP ++RL +   ++    ++LE  +   +LFD I  +G L E   R +F Q++
Sbjct: 90  KVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV 149
Query: 120 DAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
            A+ HCHS+GV HRD+K EN+L+D   G  K+ DFG  AL     E      GT  Y  P
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--EPYTDFDGTRVYSPP 207
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGAT 238
           E +S   Y    A VWS G++L+ ++ G +PF E D     ++I  AE   P   S    
Sbjct: 208 EWISRHQYHALPATVWSLGILLYDMVCGDIPF-ERD-----QEILEAELHFPAHVSPDCC 261
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFR 265
           +LI + L P P +R  +E I   PW +
Sbjct: 262 ALIRRCLAPKPSSRPSLEEILLDPWMQ 288

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 139/274 (50%), Gaps = 13/274 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD-----QIKREISIMK 64
           KY     +G G F  V  A ++E  + V +K + K  +L+   ++     ++  EI+I+ 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 65  IVRHPNIVRLHEVLASRTKVYIILE-FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
            V H NI+++ ++  ++    +++E   +G +LF  I    RL E      F+QL+ AV 
Sbjct: 85  RVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           +   K + HRD+K EN+++     +K+ DFG +A  ++G +L +T CGT  Y APEVL  
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYCAPEVLMG 203
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK 243
             Y G   ++WS GV L+ L+    PF E     L + + AA    P+  S    SL+  
Sbjct: 204 NPYRGPELEMWSLGVTLYTLVFEENPFCE-----LEETVEAA-IHPPYLVSKELMSLVSG 257
Query: 244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
           +L P P+ R  +E +   PW  +  N    + EE
Sbjct: 258 LLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEE 291

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score =  124 bits (312), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 72  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 123
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 124 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 184 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 242
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 243 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 301
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 302 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score =  124 bits (311), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 117
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 236
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 237 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 295
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 296 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score =  124 bits (311), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 73
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 193 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score =  124 bits (311), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 73
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 193 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 251
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 252 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 27  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 78
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 79  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 139 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 197
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 198 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 256
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 257 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 26  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 77
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 78  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 138 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 196
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 197 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 255
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 256 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 20  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 71
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 72  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 190
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 191 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 249
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 250 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 28  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 79
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 80  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 140 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 198
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 199 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 257
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 258 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 21  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 72
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 73  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 133 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 191
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 192 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 250
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 251 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score =  124 bits (310), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 14/268 (5%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R   YEV  TIG G++ + +  + +  G+ +  K L   ++ +      +  E+++++ +
Sbjct: 4   RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLREL 62
Query: 67  RHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLID 120
           +HPNIVR ++ +  RT   +YI++E+  GG+L   I    +    L E    R   QL  
Sbjct: 63  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 121 AVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           A+  CH +      V HRDLKP N+ LD   N+K+ DFGL+ +         T  GTP Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFS 234
           ++PE ++   Y+   +D+WS G +L+ L A   PF       L  KI   +F   P+ +S
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHP 262
                +I ++L+     R  +E I ++P
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENP 269

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 36  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHI 87
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 88  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 148 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 206
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 207 PEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 265
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score =  123 bits (309), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 146/315 (46%), Gaps = 63/315 (20%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVR 67
           KY +   IG+G++  VR A   +T    A+K++ K+ I  +  + V++IK E+ +MK + 
Sbjct: 27  KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKI--------------------------- 100
           HPNI RL+EV      + +++E   GG L DK+                           
Sbjct: 87  HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 101 -----------------VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD 143
                            V + +L+ N  R    Q+  A+ + H++G+ HRD+KPEN L  
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMR----QIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 144 SYGN--LKVSDFGLS----ALPQQGVELLHTTCGTPNYVAPEVL--SNRGYDGSAADVWS 195
           +  +  +K+ DFGLS     L       + T  GTP +VAPEVL  +N  Y G   D WS
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESY-GPKCDAWS 261
Query: 196 CGVILFVLMAGYLPF-GETDLPTLYKKINAAE-FSCPFW--FSTGATSLIHKILDPNPKT 251
            GV+L +L+ G +PF G  D  T+ + +N    F  P +   S  A  L+  +L+ N   
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 252 RIRIEGIRKHPWFRK 266
           R       +HPW  +
Sbjct: 322 RFDAMRALQHPWISQ 336

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 131/254 (51%), Gaps = 11/254 (4%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +A + + + IG G F++V  A     G  VA+K +    ++  +      +EI ++K + 
Sbjct: 31  LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH---QGRLL-ENDCRRYFQQLIDAVA 123
           HPN+++ +       ++ I+LE    G+L   I H   Q RL+ E    +YF QL  A+ 
Sbjct: 91  HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           H HS+ V HRD+KP N+ + + G +K+ D GL           H+  GTP Y++PE +  
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 210
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKINAAEFSCPF---WFSTGAT 238
            GY+   +D+WS G +L+ + A   PF   + +L +L KKI   ++  P     +S    
Sbjct: 211 NGYNFK-SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP-PLPSDHYSEELR 268
Query: 239 SLIHKILDPNPKTR 252
            L++  ++P+P+ R
Sbjct: 269 QLVNMCINPDPEKR 282

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 137/284 (48%), Gaps = 29/284 (10%)
Query: 3   KQTRRVAKYEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           K+   +  Y+V  + +G G   KV    N+ T E  A+K+L            + +RE+ 
Sbjct: 9   KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVE 60
Query: 62  I-MKIVRHPNIVRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRY 114
           +  +  + P+IVR+ +V     A R  + I++E + GGELF +I  +G     E +    
Sbjct: 61  LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 120
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCG 171
            + + +A+ + HS  + HRD+KPENLL  S      LK++DFG  A        L   C 
Sbjct: 121 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTEPCY 179
Query: 172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA-- 225
           TP YVAPEVL    YD S  D+WS GVI+++L+ GY PF    G    P +  +I     
Sbjct: 180 TPYYVAPEVLGPEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 238
Query: 226 EFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
           EF  P W   S     LI  +L   P  R+ I     HPW  ++
Sbjct: 239 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 14/268 (5%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R   YEV  TIG G++ + +  + +  G+ +  K L   ++ +      +  E+++++ +
Sbjct: 4   RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLREL 62
Query: 67  RHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLID 120
           +HPNIVR ++ +  RT   +YI++E+  GG+L   I    +    L E    R   QL  
Sbjct: 63  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 121 AVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           A+  CH +      V HRDLKP N+ LD   N+K+ DFGL+ +            GTP Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 182
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFS 234
           ++PE ++   Y+   +D+WS G +L+ L A   PF       L  KI   +F   P+ +S
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHP 262
                +I ++L+     R  +E I ++P
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENP 269

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 27/270 (10%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G   KV    +R TG+  A+K+L  S   +  +    +           P+IV +
Sbjct: 35  QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-------PHIVCI 87
Query: 75  HEVLAS----RTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSK 128
            +V  +    +  + II+E + GGELF +I  +G     E +     + +  A+   HS 
Sbjct: 88  LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147
Query: 129 GVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
            + HRD+KPENLL  S      LK++DFG +    Q    L T C TP YVAPEVL    
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEK 205
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAE--FSCPFW--FSTGA 237
           YD S  D+WS GVI+++L+ G+ PF    G+   P + ++I   +  F  P W   S  A
Sbjct: 206 YDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 264
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI  +L  +P  R+ I     HPW  ++
Sbjct: 265 KQLIRLLLKTDPTERLTITQFMNHPWINQS 294

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 14/268 (5%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R   YEV  TIG G++ + +  + +  G+ +  K L   ++ +      +  E+++++ +
Sbjct: 4   RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEK-QMLVSEVNLLREL 62
Query: 67  RHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLID 120
           +HPNIVR ++ +  RT   +YI++E+  GG+L   I    +    L E    R   QL  
Sbjct: 63  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 121 AVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           A+  CH +      V HRDLKP N+ LD   N+K+ DFGL+ +     +      GTP Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYY 182
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFS 234
           ++PE ++   Y+   +D+WS G +L+ L A   PF       L  KI   +F   P+ +S
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHP 262
                +I ++L+     R  +E I ++P
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENP 269

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score =  121 bits (304), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 131/270 (48%), Gaps = 27/270 (10%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G   KV    +R TG+  A+K+L  S   +  +    +           P+IV +
Sbjct: 16  QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-------PHIVCI 68
Query: 75  HEVLAS----RTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSK 128
            +V  +    +  + II+E + GGELF +I  +G     E +     + +  A+   HS 
Sbjct: 69  LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 128
Query: 129 GVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
            + HRD+KPENLL  S      LK++DFG +    Q    L T C TP YVAPEVL    
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEK 186
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAE--FSCPFW--FSTGA 237
           YD S  D+WS GVI+++L+ G+ PF    G+   P + ++I   +  F  P W   S  A
Sbjct: 187 YDKS-CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 245
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             LI  +L  +P  R+ I     HPW  ++
Sbjct: 246 KQLIRLLLKTDPTERLTITQFMNHPWINQS 275

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 139/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 70
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF++    +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 71  VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKPENLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  121 bits (303), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 139/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 72
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF++    +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 73  VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKPENLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 132 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKPENLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 139/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 71
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF++    +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 72  VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 139/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 72
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF++    +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 73  VIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 70
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 71  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKPENLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 130 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 71
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 72  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKPENLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 131 LKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  119 bits (299), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 76
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 77  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 195
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 196 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 255
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 256 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 68
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 69  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  119 bits (297), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 68
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 69  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-REISIMK 64
           + + KYE    +GEG++  V   +N++TG  VA+K   +S     +MV +I  REI ++K
Sbjct: 22  QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD--DDKMVKKIAMREIKLLK 79
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            +RH N+V L EV   + + Y++ EFV    L D  +    L     ++Y  Q+I+ +  
Sbjct: 80  QLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           CHS  + HRD+KPEN+L+   G +K+ DFG +       E+      T  Y APE+L   
Sbjct: 140 CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLY 219
              G A DVW+ G ++  +  G   F G++D+  LY
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 72
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 73  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 71
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 72  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  119 bits (297), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 73
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 74  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 193 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 252
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 253 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 72
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 73  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 13  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 71
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 72  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 131 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 70
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 71  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 68
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 69  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 70
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 71  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 68
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 69  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 12  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 70
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 71  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 129
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 130 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 137/272 (50%), Gaps = 14/272 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   +G+G F KV  AQN+ET    A KV+   +      ++    EI I+    HPN
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKG 129
           IV+L +       ++I++EF  GG +   ++   R L E+  +   +Q +DA+ + H   
Sbjct: 96  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-----SNR 184
           + HRDLK  N+L    G++K++DFG+SA   + ++   +  GTP ++APEV+      +R
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLI 241
            YD   ADVWS G+ L  +     P  E +   +  KI  +E    + P  +S+     +
Sbjct: 216 PYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVK 272
            K L+ N   R     + +HP+   + N P++
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKPIR 306

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 15  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 73
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 74  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 132
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 133 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 193 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 252
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 253 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 137/272 (50%), Gaps = 14/272 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   +G+G F KV  AQN+ET    A KV+   +      ++    EI I+    HPN
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKG 129
           IV+L +       ++I++EF  GG +   ++   R L E+  +   +Q +DA+ + H   
Sbjct: 96  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-----SNR 184
           + HRDLK  N+L    G++K++DFG+SA   + ++   +  GTP ++APEV+      +R
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLI 241
            YD   ADVWS G+ L  +     P  E +   +  KI  +E    + P  +S+     +
Sbjct: 216 PYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVK 272
            K L+ N   R     + +HP+   + N P++
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKPIR 306

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 18  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 76
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 77  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 135
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 136 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 195
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 196 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 255
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 256 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  118 bits (295), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 137/286 (47%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 72
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+        D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 73  VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 126/273 (46%), Gaps = 28/273 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K L            + +RE+ +  +  + P+I
Sbjct: 66  TSQVLGLGINGKVLQIFNKRTQEKFALKXLQD--------CPKARREVELHWRASQCPHI 117
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I+ E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 118 VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG  A        L T C TP YVAPEVL 
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-AKETTSHNSLTTPCYTPYYVAPEVLG 236
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D WS GVI ++L+ GY PF    G    P    +I     EF  P W   S
Sbjct: 237 PEKYDKS-CDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVS 295
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R  I     HPW  ++
Sbjct: 296 EEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 136/272 (50%), Gaps = 14/272 (5%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   +G+G F KV  AQN+ET    A KV+   +      ++    EI I+    HPN
Sbjct: 39  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPN 95
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKG 129
           IV+L +       ++I++EF  GG +   ++   R L E+  +   +Q +DA+ + H   
Sbjct: 96  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-----SNR 184
           + HRDLK  N+L    G++K++DFG+SA   + ++      GTP ++APEV+      +R
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLI 241
            YD   ADVWS G+ L  +     P  E +   +  KI  +E    + P  +S+     +
Sbjct: 216 PYD-YKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFL 274
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVK 272
            K L+ N   R     + +HP+   + N P++
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKPIR 306

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  ++ CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLSFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 137/286 (47%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 14  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 72
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ E V     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 73  VIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 132 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+  +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+  +   T  +      I REIS++K + HPNIV+L +
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 68
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 69  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 136/280 (48%), Gaps = 33/280 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 11  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 69
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ EF+     +  D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 70  VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 129 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
                        SL+ ++L  +P  RI  +    HP+F+
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 136/286 (47%), Gaps = 33/286 (11%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEGT+  V  A+N+ TGE VA+K +   T  +      I REIS++K + HPNIV+L +
Sbjct: 10  IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKELNHPNIVKLLD 68
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
           V+ +  K+Y++ E V        D     G  L    + Y  QL+  +A CHS  V HRD
Sbjct: 69  VIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPL-IKSYLFQLLQGLAFCHSHRVLHRD 127
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           LKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  +A D+W
Sbjct: 128 LKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 195 SCGVILFVLMAGYLPF-GETDLPTLYK-----------------KINAAEFSCPFW---- 232
           S G I   ++     F G++++  L++                  +   + S P W    
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 233 -------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                        SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G GT+A V    N+ TG  VA+K +   +  +        REIS+MK ++H NIVRL++
Sbjct: 13  LGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 77  VLASRTKVYIILEFVTGG--ELFDK--IVHQGRLLENDCRRYFQ-QLIDAVAHCHSKGVY 131
           V+ +  K+ ++ EF+     +  D   + +  R LE +  +YFQ QL+  +A CH   + 
Sbjct: 71  VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           HRDLKP+NLL++  G LK+ DFGL+      V    +   T  Y AP+VL       ++ 
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 192 DVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEFSCPFWFST------------ 235
           D+WSCG IL  ++ G   F  T+    L  ++  +     S   W S             
Sbjct: 191 DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES--LWPSVTKLPKYNPNIQQ 248
Query: 236 --------------------GATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN 269
                                    +H +L  NP  R+  +    HPWF + Y+
Sbjct: 249 RPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score =  115 bits (287), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 134/297 (45%), Gaps = 51/297 (17%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------REI 60
           + KYE    IGEGT+  V  A+NRET E VA+K        + R+ D  +       REI
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK--------RVRLDDDDEGVPSSALREI 52
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
            ++K ++H NIVRLH+VL S  K+ ++ EF      + FD     G L     + +  QL
Sbjct: 53  CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQL 110
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +  CHS+ V HRDLKP+NLL++  G LK++DFGL+      V        T  Y  P
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLP-FGETDLPTLYKKI--------------- 222
           +VL       ++ D+WS G I   L     P F   D+    K+I               
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 223 -NAAEFSCPFWFSTGATSLIH--------------KILDPNPKTRIRIEGIRKHPWF 264
               ++  P+      TSL++               +L  NP  RI  E   +HP+F
Sbjct: 231 TKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 29/275 (10%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + +   +  AMK+L K  +LK       + E  ++       
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + RL E   R Y  +++ A+   H   
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVL----SNR 184
             HRD+KP+N+L+D  G+++++DFG    L + G        GTP+Y++PE+L      +
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIHK 243
           G  G   D WS GV ++ ++ G  PF    L   Y KI N  E    F F T  T     
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE---RFQFPTQVTD---- 308
Query: 244 ILDPNPKTRIR--------------IEGIRKHPWF 264
            +  N K  IR              IE  +KHP+F
Sbjct: 309 -VSENAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREI--SIMKIVR 67
           + V R IG G F +V   +  +TG+  AMK L K  I +K      +   I  S++    
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P IV +     +  K+  IL+ + GG+L   +   G   E D R Y  ++I  + H H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + V +RDLKP N+LLD +G++++SD GL+       +  H + GT  Y+APEVL      
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 188 GSAADVWSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
            S+AD +S G +LF L+ G+ PF +    D   + +         P  FS    SL+  +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 245 LDPNPKTRIRIEG-----IRKHPWFR---------KNYNPVKCSEEEEVNLDDVHAV--F 288
           L  +   R+   G     +++ P+FR         + Y P       EVN  D   +  F
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSF 488
Query: 289 DD 290
           D+
Sbjct: 489 DE 490

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREI--SIMKIVR 67
           + V R IG G F +V   +  +TG+  AMK L K  I +K      +   I  S++    
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P IV +     +  K+  IL+ + GG+L   +   G   E D R Y  ++I  + H H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + V +RDLKP N+LLD +G++++SD GL+       +  H + GT  Y+APEVL      
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 188 GSAADVWSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
            S+AD +S G +LF L+ G+ PF +    D   + +         P  FS    SL+  +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 245 LDPNPKTRIRIEG-----IRKHPWFR---------KNYNPVKCSEEEEVNLDDVHAV--F 288
           L  +   R+   G     +++ P+FR         + Y P       EVN  D   +  F
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSF 488
Query: 289 DD 290
           D+
Sbjct: 489 DE 490

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREI--SIMKIVR 67
           + V R IG G F +V   +  +TG+  AMK L K  I +K      +   I  S++    
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P IV +     +  K+  IL+ + GG+L   +   G   E D R Y  ++I  + H H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + V +RDLKP N+LLD +G++++SD GL+       +  H + GT  Y+APEVL      
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQKGVAY 368
Query: 188 GSAADVWSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
            S+AD +S G +LF L+ G+ PF +    D   + +         P  FS    SL+  +
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 428
Query: 245 LDPNPKTRIRIEG-----IRKHPWFR---------KNYNPVKCSEEEEVNLDDVHAV--F 288
           L  +   R+   G     +++ P+FR         + Y P       EVN  D   +  F
Sbjct: 429 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSF 488
Query: 289 DD 290
           D+
Sbjct: 489 DE 490

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 141/302 (46%), Gaps = 24/302 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREI--SIMKIVR 67
           + V R IG G F +V   +  +TG+  AMK L K  I +K      +   I  S++    
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P IV +     +  K+  IL+ + GG+L   +   G   E D R Y  ++I  + H H+
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + V +RDLKP N+LLD +G++++SD GL+       +  H + GT  Y+APEVL      
Sbjct: 310 RFVVYRDLKPANILLDEHGHVRISDLGLAC--DFSKKKPHASVGTHGYMAPEVLQKGVAY 367
Query: 188 GSAADVWSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
            S+AD +S G +LF L+ G+ PF +    D   + +         P  FS    SL+  +
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 427
Query: 245 LDPNPKTRIRIEG-----IRKHPWFR---------KNYNPVKCSEEEEVNLDDVHAV--F 288
           L  +   R+   G     +++ P+FR         + Y P       EVN  D   +  F
Sbjct: 428 LQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSF 487
Query: 289 DD 290
           D+
Sbjct: 488 DE 489

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 137/284 (48%), Gaps = 39/284 (13%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI-SIMKIVRHPNIVRLH 75
           +GEG +AKV+ A + + G+  A+K++ K          ++ RE+ ++ +   + NI+ L 
Sbjct: 21  LGEGAYAKVQGAVSLQNGKEYAVKIIEKQA---GHSRSRVFREVETLYQCQGNKNILELI 77
Query: 76  EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
           E     T+ Y++ E + GG +   I  Q    E +  R  + +  A+   H+KG+ HRDL
Sbjct: 78  EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 136 KPENLLLDS---YGNLKVSDFGL--------SALPQQGVELLHTTCGTPNYVAPEVL--- 181
           KPEN+L +S      +K+ DF L        S  P    EL  T CG+  Y+APEV+   
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT-TPCGSAEYMAPEVVEVF 196
Query: 182 -SNRGYDGSAADVWSCGVILFVLMAGYLPF------------GE---TDLPTLYKKINAA 225
                +     D+WS GV+L+++++GY PF            GE        L++ I   
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG 256
Query: 226 EFSCP--FW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
           ++  P   W   S+ A  LI K+L  + K R+    + +HPW +
Sbjct: 257 KYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 135/297 (45%), Gaps = 51/297 (17%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------REI 60
           + KYE    IGEGT+  V  A+NRET E VA+K        + R+ D  +       REI
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK--------RVRLDDDDEGVPSSALREI 52
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
            ++K ++H NIVRLH+VL S  K+ ++ EF      + FD     G L     + +  QL
Sbjct: 53  CLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQL 110
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +  CHS+ V HRDLKP+NLL++  G LK+++FGL+      V        T  Y  P
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLM-AGYLPFGETDLPTLYKKI--------------- 222
           +VL       ++ D+WS G I   L  AG   F   D+    K+I               
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 223 -NAAEFSCPFWFSTGATSLIH--------------KILDPNPKTRIRIEGIRKHPWF 264
               ++  P+      TSL++               +L  NP  RI  E   +HP+F
Sbjct: 231 TKLPDYK-PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 138/271 (50%), Gaps = 31/271 (11%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   +G+G F KV  A+N+ETG   A KV+   +  +  + D I  EI I+    HP 
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYI-VEIEILATCDHPY 77
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKG 129
           IV+L        K++I++EF  GG +   ++   R L E   +   +Q+++A+   HSK 
Sbjct: 78  IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV-----LSNR 184
           + HRDLK  N+L+   G+++++DFG+SA   + ++   +  GTP ++APEV     + + 
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 185 GYDGSAADVWSCGVILFVL------------MAGYLPFGETDLPTLYKKINAAEFSCPFW 232
            YD   AD+WS G+ L  +            M   L   ++D PTL   +  +++S  F 
Sbjct: 198 PYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL---LTPSKWSVEF- 252
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPW 263
                   +   LD NP+TR     + +HP+
Sbjct: 253 -----RDFLKIALDKNPETRPSAAQLLEHPF 278

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 135/262 (51%), Gaps = 13/262 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   +G+G F KV  A+N+ETG   A KV+   +  +  + D I  EI I+    HP 
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYI-VEIEILATCDHPY 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKG 129
           IV+L        K++I++EF  GG +   ++   R L E   +   +Q+++A+   HSK 
Sbjct: 70  IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV-----LSNR 184
           + HRDLK  N+L+   G+++++DFG+SA   + ++   +  GTP ++APEV     + + 
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLI 241
            YD   AD+WS G+ L  +     P  E +   +  KI  ++      P  +S      +
Sbjct: 190 PYD-YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFL 248
Query: 242 HKILDPNPKTRIRIEGIRKHPW 263
              LD NP+TR     + +HP+
Sbjct: 249 KIALDKNPETRPSAAQLLEHPF 270

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score =  112 bits (280), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 134/257 (52%), Gaps = 8/257 (3%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A+ + +G  VA+K++    + K +  + +  E+ IM+  +H N+V +++
Sbjct: 53  IGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D IV Q RL E       + ++ A+A+ H++GV HRD+K
Sbjct: 110 SYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIK 168
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APEV+S   Y  +  D+WS 
Sbjct: 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLY-ATEVDIWSL 227
Query: 197 GVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLIHKILDPNPKTRI 253
           G+++  ++ G  P+         K++  +   +       S      + ++L  +P+ R 
Sbjct: 228 GIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERA 287
Query: 254 RIEGIRKHPWFRKNYNP 270
             + +  HP+  +   P
Sbjct: 288 TAQELLDHPFLLQTGLP 304

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  + TG+ VA+K   K  + K +  + +  E+ IM+   H N+V ++ 
Sbjct: 53  IGEGSTGIVCIATEKHTGKQVAVK---KMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A+++ H++GV HRD+K
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL S G +K+SDFG  A   + V       GTP ++APEV+S   Y G+  D+WS 
Sbjct: 169 SDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPY-GTEVDIWSL 227
Query: 197 GVILFVLMAGYLPF 210
           G+++  ++ G  P+
Sbjct: 228 GIMVIEMIDGEPPY 241

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 28/277 (10%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           + KQ   V  ++V   +GEG++  V  A ++ETG+ VA+K +   + L+     +I +EI
Sbjct: 23  LTKQPEEV--FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-----EIIKEI 75
Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLI 119
           SIM+    P++V+ +      T ++I++E+   G + D I +    L E++     Q  +
Sbjct: 76  SIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL 135
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
             + + H     HRD+K  N+LL++ G+ K++DFG++      +   +   GTP ++APE
Sbjct: 136 KGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPE 195
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-----------TDLPTLYKKINAAEFS 228
           V+   GY+   AD+WS G+    +  G  P+ +           T+ P  ++K       
Sbjct: 196 VIQEIGYN-CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRK------- 247
Query: 229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
            P  +S   T  + + L  +P+ R     + +HP+ R
Sbjct: 248 -PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR 283

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 135/282 (47%), Gaps = 15/282 (5%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIK 57
           MK++    ++Y+VG  +G G F  V           VA+K + K  I     +    ++ 
Sbjct: 1   MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 58  REISIMKIVRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRY 114
            E+ ++K V      ++RL +         +ILE      +LFD I  +G L E   R +
Sbjct: 61  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
           F Q+++AV HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT 
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTR 178
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF 233
            Y  PE +    Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----V 232
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
           S+    LI   L   P  R   E I+ HPW +    P + +E
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 135/282 (47%), Gaps = 15/282 (5%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIK 57
           MK++    ++Y+VG  +G G F  V           VA+K + K  I     +    ++ 
Sbjct: 1   MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 58  REISIMKIVRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRY 114
            E+ ++K V      ++RL +         +ILE      +LFD I  +G L E   R +
Sbjct: 61  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
           F Q+++AV HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT 
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTR 178
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF 233
            Y  PE +    Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----V 232
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
           S+    LI   L   P  R   E I+ HPW +    P + +E
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 135/282 (47%), Gaps = 15/282 (5%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIK 57
           MK++    ++Y+VG  +G G F  V           VA+K + K  I     +    ++ 
Sbjct: 1   MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 58  REISIMKIVRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRY 114
            E+ ++K V      ++RL +         +ILE      +LFD I  +G L E   R +
Sbjct: 61  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 120
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
           F Q+++AV HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT 
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTR 178
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF 233
            Y  PE +    Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       
Sbjct: 179 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----V 232
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
           S+    LI   L   P  R   E I+ HPW +    P + +E
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 274

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 127/270 (47%), Gaps = 17/270 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F++V   + ++TG+  AMK++ K  +LK   V   + E  ++       
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKG 129
           I +LH        +Y+++E+  GG+L   +   G R+     R Y  +++ A+   H  G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLS------ 182
             HRD+KP+N+LLD  G+++++DFG    L   G        GTP+Y++PE+L       
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI--NAAEFSCPF---WFSTGA 237
             G  G   D W+ GV  + +  G  PF        Y KI       S P         A
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 238 TSLIHKILDPNPKTRIRIEG---IRKHPWF 264
              I ++L P P+TR+   G    R HP+F
Sbjct: 303 RDFIQRLLCP-PETRLGRGGAGDFRTHPFF 331

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 21/273 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQI--KREISIMKIVR 67
           KY +   +G G F  V    +R    S     +AK   +K +  DQ+  K+EISI+ I R
Sbjct: 6   KYMIAEDLGRGEFGIV----HRCVETSSKKTYMAK--FVKVKGTDQVLVKKEISILNIAR 59
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCH 126
           H NI+ LHE   S  ++ +I EF++G ++F++I      L E +   Y  Q+ +A+   H
Sbjct: 60  HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 127 SKGVYHRDLKPENLLLDS--YGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVLS 182
           S  + H D++PEN++  +     +K+ +FG +    P     LL T    P Y APEV  
Sbjct: 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT---APEYYAPEV-H 175
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC---PF-WFSTGAT 238
                 +A D+WS G +++VL++G  PF       + + I  AE++     F   S  A 
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235
Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
             + ++L    K+R+      +HPW ++    V
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIERV 268

>pdb|2EHB|D Chain D, The Structure Of The C-Terminal Domain Of The Protein Kinase Atsos2 Bound To The Calcium Sensor Atsos3 Length = 143

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 59/69 (85%)
Query: 306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKV 365
           GPL+MNAFEMITLSQGLNL+ALFDRRQD+VKRQTRFVSR+    I++NIEAVA S+  K 
Sbjct: 3   GPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKS 62
Query: 366 HTRNYKVCL 374
           HTRN+K  L
Sbjct: 63  HTRNFKTRL 71

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 132/274 (48%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 8   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE +    +LFD I  +G L E   R +F Q+++AV
Sbjct: 68  VSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 185
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 239
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 240 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 273

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 31/285 (10%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YE+   IG G  A V+ A      E VA+K +          +D++ +EI  M    HPN
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPN 74
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH--------QGRLLENDCRRYFQQLIDAV 122
           IV  +     + +++++++ ++GG + D I H         G L E+      +++++ +
Sbjct: 75  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH-----TTCGTPNYVA 177
            + H  G  HRD+K  N+LL   G+++++DFG+SA    G ++       T  GTP ++A
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 178 PEVLSN-RGYDGSAADVWSCGVILFVLMAGYLPFG------------ETDLPTLYKKINA 224
           PEV+   RGYD   AD+WS G+    L  G  P+             + D P+L   +  
Sbjct: 195 PEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 253
Query: 225 AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN 269
            E      +      +I   L  +P+ R     + +H +F+K  N
Sbjct: 254 KEMLKK--YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 15/282 (5%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIK 57
           MK++    ++Y+VG  +G G F  V           VA+K + K  I     +    ++ 
Sbjct: 23  MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 58  REISIMKIVRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRY 114
            E+ ++K V      ++RL +         +ILE      +LFD I  +G L E   R +
Sbjct: 83  MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 142
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
           F Q+++AV HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT 
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTR 200
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF 233
            Y  PE +    Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       
Sbjct: 201 VYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----V 254
Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
           S     LI   L   P  R   E I+ HPW +    P + +E
Sbjct: 255 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 296

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score =  108 bits (271), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV---DQIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 7   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 67  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 184
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 238
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 239 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 272

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 8   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 68  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 185
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 239
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 240 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 273

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV---DQIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S+    LI
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSSECQHLI 235
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV---DQIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S     LI
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSXECQHLI 235
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 36  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 96  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 213
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S+    LI
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSSECQHLI 267
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV---DQIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 64  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 181
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 235
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 236 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 36  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 96  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 213
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 267
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 36  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 96  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 213
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S+    LI
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSSECQHLI 267
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 37  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 97  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S+    LI
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSSECQHLI 268
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 269 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 37  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 97  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S+    LI
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSSECQHLI 268
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 269 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score =  108 bits (269), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 23  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 83  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 200
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 254
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 255 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 288

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 51  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 228
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 282
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 283 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 24  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 84  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 255
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 256 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 289

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  R +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 32  IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 89  SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 147
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APE++S   Y G   D+WS 
Sbjct: 148 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSL 206
Query: 197 GVILFVLMAGYLP-FGET----------DLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           G+++  ++ G  P F E           +LP   K ++          S      + ++L
Sbjct: 207 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------SPSLKGFLDRLL 258
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNP 270
             +P  R     + KHP+  K   P
Sbjct: 259 VRDPAQRATAAELLKHPFLAKAGPP 283

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score =  107 bits (268), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 131/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 43  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 102
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 103 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 162
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 220
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S+    LI
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSSECQHLI 274
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 275 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 308

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  R +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 28  IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 85  SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 143
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APE++S   Y G   D+WS 
Sbjct: 144 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSL 202
Query: 197 GVILFVLMAGYLP-FGET----------DLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           G+++  ++ G  P F E           +LP   K ++          S      + ++L
Sbjct: 203 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------SPSLKGFLDRLL 254
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNP 270
             +P  R     + KHP+  K   P
Sbjct: 255 VRDPAQRATAAELLKHPFLAKAGPP 279

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 31/282 (10%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YE+   IG G  A V+ A      E VA+K +          +D++ +EI  M    HPN
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPN 69
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH--------QGRLLENDCRRYFQQLIDAV 122
           IV  +     + +++++++ ++GG + D I H         G L E+      +++++ +
Sbjct: 70  IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH-----TTCGTPNYVA 177
            + H  G  HRD+K  N+LL   G+++++DFG+SA    G ++       T  GTP ++A
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 178 PEVLSN-RGYDGSAADVWSCGVILFVLMAGYLPFG------------ETDLPTLYKKINA 224
           PEV+   RGYD   AD+WS G+    L  G  P+             + D P+L   +  
Sbjct: 190 PEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD 248
Query: 225 AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
            E      +      +I   L  +P+ R     + +H +F+K
Sbjct: 249 KEMLKK--YGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 288

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 37/295 (12%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + KY+    +GEGT+  V  A++ + G  VA+K + +       +     REIS++K + 
Sbjct: 20  MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELH 77
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHC 125
           HPNIV L +V+ S   + ++ EF+       K++ + +  L ++  + Y  QL+  VAHC
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H   + HRDLKP+NLL++S G LK++DFGL+      V        T  Y AP+VL    
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-GETD---LPTLYKKI---NAAEF----SCPFW-- 232
              ++ D+WS G I   ++ G   F G TD   LP ++  +   N  E+      P W  
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 233 -----------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
                            F      L+  +L  +P  RI       HP+F K+ +P
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF-KDLDP 309

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score =  107 bits (268), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  R +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 37  IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 94  SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 152
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APE++S   Y G   D+WS 
Sbjct: 153 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSL 211
Query: 197 GVILFVLMAGYLP-FGET----------DLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           G+++  ++ G  P F E           +LP   K ++          S      + ++L
Sbjct: 212 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------SPSLKGFLDRLL 263
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNP 270
             +P  R     + KHP+  K   P
Sbjct: 264 VRDPAQRATAAELLKHPFLAKAGPP 288

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 37/295 (12%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + KY+    +GEGT+  V  A++ + G  VA+K + +       +     REIS++K + 
Sbjct: 20  MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRI-RLDAEDEGIPSTAIREISLLKELH 77
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHC 125
           HPNIV L +V+ S   + ++ EF+       K++ + +  L ++  + Y  QL+  VAHC
Sbjct: 78  HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H   + HRDLKP+NLL++S G LK++DFGL+      V        T  Y AP+VL    
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-GETD---LPTLYKKI---NAAEF----SCPFW-- 232
              ++ D+WS G I   ++ G   F G TD   LP ++  +   N  E+      P W  
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255
Query: 233 -----------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
                            F      L+  +L  +P  RI       HP+F K+ +P
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF-KDLDP 309

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 13/267 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + + T    AMK+L K  +LK       + E  ++       
Sbjct: 76  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + +L E+  R Y  +++ A+   H   
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVL----SNR 184
             HRD+KP+N+LLD  G+++++DFG    +   G        GTP+Y++PE+L       
Sbjct: 196 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 255
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW---FSTGATS 239
           G  G   D WS GV ++ ++ G  PF    L   Y KI   E  F  P      S  A  
Sbjct: 256 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 315
Query: 240 LIHKILDPNPK--TRIRIEGIRKHPWF 264
           LI +++    +   +  IE  +KH +F
Sbjct: 316 LIQRLICSRERRLGQNGIEDFKKHAFF 342

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  R +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 39  IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 96  SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 154
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APE++S   Y G   D+WS 
Sbjct: 155 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSL 213
Query: 197 GVILFVLMAGYLP-FGET----------DLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           G+++  ++ G  P F E           +LP   K ++          S      + ++L
Sbjct: 214 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------SPSLKGFLDRLL 265
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNP 270
             +P  R     + KHP+  K   P
Sbjct: 266 VRDPAQRATAAELLKHPFLAKAGPP 290

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 36  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 95
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 96  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 213
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S     LI
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSXECQHLI 267
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 268 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 301

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 125/267 (46%), Gaps = 13/267 (4%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + + T    AMK+L K  +LK       + E  ++       
Sbjct: 92  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + +L E+  R Y  +++ A+   H   
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVL----SNR 184
             HRD+KP+N+LLD  G+++++DFG    +   G        GTP+Y++PE+L       
Sbjct: 212 YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGM 271
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW---FSTGATS 239
           G  G   D WS GV ++ ++ G  PF    L   Y KI   E  F  P      S  A  
Sbjct: 272 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKD 331
Query: 240 LIHKILDPNPK--TRIRIEGIRKHPWF 264
           LI +++    +   +  IE  +KH +F
Sbjct: 332 LIQRLICSRERRLGQNGIEDFKKHAFF 358

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 37  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 97  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S     LI
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSXECQHLI 268
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 269 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 51  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 110
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 111 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 228
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S     LI
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSXECQHLI 282
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 283 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 37  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 96
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 97  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D     ++I   +       S     LI
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD-----EEIIGGQVFFRQRVSXECQHLI 268
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 269 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 302

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 23  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 82
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 83  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 200
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S     LI
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSXECQHLI 254
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 255 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 288

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 24  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 84  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S     LI
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSXECQHLI 255
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 256 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 289

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 56  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 115
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 116 VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 175
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 233
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S     LI
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSXECQHLI 287
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 288 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 321

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 130/265 (49%), Gaps = 24/265 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  R +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 82  IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 197
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APE++S   Y G   D+WS 
Sbjct: 198 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSL 256
Query: 197 GVILFVLMAGYLP-FGET----------DLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           G+++  ++ G  P F E           +LP   K ++          S      + ++L
Sbjct: 257 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKV--------SPSLKGFLDRLL 308
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNP 270
             +P  R     + KHP+  K   P
Sbjct: 309 VRDPAQRATAAELLKHPFLAKAGPP 333

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKI 65
           ++Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K 
Sbjct: 24  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 83
Query: 66  VRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           V      ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV
Sbjct: 84  VSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 123 AHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V       GT  Y  PE +
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWI 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
               Y G +A VWS G++L+ ++ G +PF E D   +  ++   +       S     LI
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-----VSXECQHLI 255
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
              L   P  R   E I+ HPW +    P + +E
Sbjct: 256 RWCLALRPXDRPTFEEIQNHPWMQDVLLPQETAE 289

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 24/266 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IGEG+   V  A  R +G+ VA+K   K  + K +  + +  E+ IM+  +H N+V ++ 
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVK---KMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                 ++++++EF+ GG L D + H  R+ E         ++ A++  H++GV HRD+K
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIK 274
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
            +++LL   G +K+SDFG  A   + V       GTP ++APE++S   Y G   D+WS 
Sbjct: 275 SDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY-GPEVDIWSL 333
Query: 197 GVILFVLMAGYLP-FGET----------DLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
           G+++  ++ G  P F E           +LP   K ++          S      + ++L
Sbjct: 334 GIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHK--------VSPSLKGFLDRLL 385
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPV 271
             +P  R     + KHP+  K   P 
Sbjct: 386 VRDPAQRATAAELLKHPFLAKAGPPA 411

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 6/215 (2%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-REISIMKIV 66
           + KYE    IGEG++  V   +NR+TG+ VA+K   +S      ++ +I  REI ++K +
Sbjct: 2   MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE--DDPVIKKIALREIRMLKQL 59
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           +HPN+V L EV   + +++++ E+     L +   +Q  + E+  +    Q + AV  CH
Sbjct: 60  KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
                HRD+KPEN+L+  +  +K+ DFG + L     +       T  Y +PE+L     
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 187 DGSAADVWSCGVILFVLMAGYLPF--GETDLPTLY 219
            G   DVW+ G +   L++G +P   G++D+  LY
Sbjct: 180 YGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLY 213

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 135/286 (47%), Gaps = 41/286 (14%)
Query: 16  TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVRL 74
            +GEG  A+V+   N  T +  A+K++ K       +  ++ RE+ ++ +   H N++ L
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
            E      + Y++ E + GG +   I  +    E +     Q +  A+   H+KG+ HRD
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 135 LKPENLLLD---SYGNLKVSDFGLSA--------LPQQGVELLHTTCGTPNYVAPEVLSN 183
           LKPEN+L +       +K+ DFGL +         P    ELL T CG+  Y+APEV+  
Sbjct: 137 LKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELL-TPCGSAEYMAPEVVEA 195
Query: 184 RGYDGSA----ADVWSCGVILFVLMAGYLPF------------GETDLPT----LYKKIN 223
              + S      D+WS GVIL++L++GY PF            GE   P     L++ I 
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA-CPACQNMLFESIQ 254
Query: 224 AAEFSCP--FW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
             ++  P   W   S  A  LI K+L  + K R+    + +HPW +
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  105 bits (261), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 119/262 (45%), Gaps = 22/262 (8%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           +   IG G+F  V  A+    G  VA+K+L +      R V++  RE++IMK +RHPNIV
Sbjct: 41  IKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIV 97
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA-----HCHS 127
                +     + I+ E+++ G L+  +   G   + D RR      D        H  +
Sbjct: 98  LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HRDLK  NLL+D    +KV DFGLS L            GTP ++APEVL +   +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
              +DV+S GVIL+ L     P+G          +N A+      F      +   +   
Sbjct: 218 -EKSDVYSFGVILWELATLQQPWG---------NLNPAQVVAAVGFKCKRLEIPRNL--- 264
Query: 248 NPKTRIRIEGI-RKHPWFRKNY 268
           NP+    IEG     PW R ++
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSF 286

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + KY     IGEGT+  V  AQN   GE+ A+K + +       +     REISI+K ++
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           H NIV+L++V+ ++ ++ ++ E +     +L D  V +G L     + +  QL++ +A+C
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H + V HRDLKP+NLL++  G LK++DFGL+      V        T  Y AP+VL    
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------------GETDLP---- 216
              +  D+WS G I   ++ G   F                           T+LP    
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 217 --TLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             T+Y+ +    F            L+ K+L  +P  RI  +   +H +F++N
Sbjct: 237 NFTVYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + KY     IGEGT+  V  AQN   GE+ A+K + +       +     REISI+K ++
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           H NIV+L++V+ ++ ++ ++ E +     +L D  V +G L     + +  QL++ +A+C
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H + V HRDLKP+NLL++  G LK++DFGL+      V        T  Y AP+VL    
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------------GETDLP---- 216
              +  D+WS G I   ++ G   F                           T+LP    
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 217 --TLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             T+Y+ +    F            L+ K+L  +P  RI  +   +H +F++N
Sbjct: 237 NFTVYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  104 bits (260), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 137/293 (46%), Gaps = 39/293 (13%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + KY     IGEGT+  V  AQN   GE+ A+K + +       +     REISI+K ++
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKI-RLEKEDEGIPSTTIREISILKELK 58
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           H NIV+L++V+ ++ ++ ++ E +     +L D  V +G L     + +  QL++ +A+C
Sbjct: 59  HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           H + V HRDLKP+NLL++  G LK++DFGL+      V        T  Y AP+VL    
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------------GETDLP---- 216
              +  D+WS G I   ++ G   F                           T+LP    
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 217 --TLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             T+Y+ +    F            L+ K+L  +P  RI  +   +H +F++N
Sbjct: 237 NFTVYEPLPWESFLKG--LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 129/261 (49%), Gaps = 12/261 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      K  +   I  EI +M+  ++P
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q      T  GTP ++APEV++ + Y 
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAY- 193
Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY--KKINAAEFSCPFWFSTGATSLIHKI 244
           G   D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ 
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           LD + + R   + + +H + +
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 120/262 (45%), Gaps = 22/262 (8%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           +   IG G+F  V  A+    G  VA+K+L +      R V++  RE++IMK +RHPNIV
Sbjct: 41  IKEKIGAGSFGTVHRAEWH--GSDVAVKILMEQDFHAER-VNEFLREVAIMKRLRHPNIV 97
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA-----HCHS 127
                +     + I+ E+++ G L+  +   G   + D RR      D        H  +
Sbjct: 98  LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
             + HR+LK  NLL+D    +KV DFGLS L         +  GTP ++APEVL +   +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
              +DV+S GVIL+ L     P+G          +N A+      F      +   +   
Sbjct: 218 -EKSDVYSFGVILWELATLQQPWG---------NLNPAQVVAAVGFKCKRLEIPRNL--- 264
Query: 248 NPKTRIRIEGI-RKHPWFRKNY 268
           NP+    IEG     PW R ++
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSF 286

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 3/215 (1%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++   +G G  + V  A++      VA+K +      K   + + +RE+     + H 
Sbjct: 12  RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV + +V       Y+++E++ G  L + I   G L  +    +  Q++D + H H   
Sbjct: 72  NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR 131
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
           + HRD+KP+N+L+DS   LK+ DFG++ AL +  +   +   GT  Y +PE       D 
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATD- 190
Query: 189 SAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKI 222
              D++S G++L+ ++ G  PF GET +    K I
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI 225

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 41/286 (14%)
Query: 16  TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVRL 74
            +GEG  A+V+   N  T +  A+K++ K       +  ++ RE+ ++ +   H N++ L
Sbjct: 20  VLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
            E      + Y++ E + GG +   I  +    E +     Q +  A+   H+KG+ HRD
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRD 136
Query: 135 LKPENLLLD---SYGNLKVSDFGLSA--------LPQQGVELLHTTCGTPNYVAPEVLSN 183
           LKPEN+L +       +K+ DF L +         P    ELL T CG+  Y+APEV+  
Sbjct: 137 LKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL-TPCGSAEYMAPEVVEA 195
Query: 184 RGYDGSA----ADVWSCGVILFVLMAGYLPF------------GETDLPT----LYKKIN 223
              + S      D+WS GVIL++L++GY PF            GE   P     L++ I 
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA-CPACQNMLFESIQ 254
Query: 224 AAEFSCP--FW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
             ++  P   W   S  A  LI K+L  + K R+    + +HPW +
Sbjct: 255 EGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 14/264 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G G F +V   Q + TG+  A K L K  + K +       E  I+  V    IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGV 130
                ++T + +++  + GG++   I +         E     Y  Q++  + H H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  GN+++SD GL+   + G        GTP ++APE+L    YD S 
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS- 369
Query: 191 ADVWSCGVILFVLMAGYLPF---GE-TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            D ++ GV L+ ++A   PF   GE  +   L +++     + P  FS  +      +L 
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQ 429
Query: 247 PNPKTRIRI-----EGIRKHPWFR 265
            +P+ R+       +G+R HP FR
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFR 453

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 14/264 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G G F +V   Q + TG+  A K L K  + K +       E  I+  V    IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAHCHSKGV 130
                ++T + +++  + GG++   I +         E     Y  Q++  + H H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  GN+++SD GL+   + G        GTP ++APE+L    YD S 
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS- 369
Query: 191 ADVWSCGVILFVLMAGYLPF---GE-TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            D ++ GV L+ ++A   PF   GE  +   L +++     + P  FS  +      +L 
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQ 429
Query: 247 PNPKTRI-----RIEGIRKHPWFR 265
            +P+ R+       +G+R HP FR
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFR 453

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 14/264 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G G F +V   Q + TG+  A K L K  + K +       E  I+  V    IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAHCHSKGV 130
                ++T + +++  + GG++   I +         E     Y  Q++  + H H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  GN+++SD GL+   + G        GTP ++APE+L    YD S 
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS- 369
Query: 191 ADVWSCGVILFVLMAGYLPF---GE-TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            D ++ GV L+ ++A   PF   GE  +   L +++     + P  FS  +      +L 
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQ 429
Query: 247 PNPKTRI-----RIEGIRKHPWFR 265
            +P+ R+       +G+R HP FR
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFR 453

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 14/264 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G G F +V   Q + TG+  A K L K  + K +       E  I+  V    IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGV 130
                ++T + +++  + GG++   I +         E     Y  Q++  + H H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  GN+++SD GL+   + G        GTP ++APE+L    YD S 
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS- 369
Query: 191 ADVWSCGVILFVLMAGYLPF---GE-TDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            D ++ GV L+ ++A   PF   GE  +   L +++     + P  FS  +      +L 
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQ 429
Query: 247 PNPKTRI-----RIEGIRKHPWFR 265
            +P+ R+       +G+R HP FR
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFR 453

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 135/266 (50%), Gaps = 19/266 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF--QQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I H G+    + R  F   ++   +   H + + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD +G++++SD GL+    +G + +    GT  Y+APEV+ N  Y  S  D
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNERYTFS-PD 367
Query: 193 VWSCGVILFVLMAGYLPFGE-------TDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
            W+ G +L+ ++AG  PF +        ++  L K++   E+S    FS  A SL  ++L
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEEYS--ERFSPQARSLCSQLL 424
Query: 246 DPNPKTRIRIEG-----IRKHPWFRK 266
             +P  R+   G     +++HP F+K
Sbjct: 425 CKDPAERLGCRGGSAREVKEHPLFKK 450

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 135/266 (50%), Gaps = 19/266 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF--QQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I H G+    + R  F   ++   +   H + + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD +G++++SD GL+    +G + +    GT  Y+APEV+ N  Y  S  D
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNERYTFS-PD 367
Query: 193 VWSCGVILFVLMAGYLPFGE-------TDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
            W+ G +L+ ++AG  PF +        ++  L K++   E+S    FS  A SL  ++L
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEEYS--ERFSPQARSLCSQLL 424
Query: 246 DPNPKTRIRIEG-----IRKHPWFRK 266
             +P  R+   G     +++HP F+K
Sbjct: 425 CKDPAERLGCRGGSAREVKEHPLFKK 450

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 72/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      K  +   I  EI +M+  ++P
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q         GTP ++APEV++ + Y 
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAY- 193
Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY--KKINAAEFSCPFWFSTGATSLIHKI 244
           G   D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ 
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           LD + + R   + + +H + +
Sbjct: 254 LDMDVEKRGSAKELLQHQFLK 274

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 10/213 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      K  +   I  EI +M+  ++P
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 78
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 79  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HR++K +N+LL   G++K++DFG  A   P+Q      T  GTP ++APEV++ + Y 
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAY- 194
Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY 219
           G   D+WS G++   ++ G  P+  E  L  LY
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      K  +   I  EI +M+  ++P
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 78
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 79  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q         GTP ++APEV++ + Y 
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAY- 194
Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY 219
           G   D+WS G++   ++ G  P+  E  L  LY
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 227

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 111/213 (52%), Gaps = 10/213 (4%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      K  +   I  EI +M+  ++P
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL---IINEILVMRENKNP 77
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA--LPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           V HRD+K +N+LL   G++K++DFG  A   P+Q         GTP ++APEV++ + Y 
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAY- 193
Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLY 219
           G   D+WS G++   ++ G  P+  E  L  LY
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++            Q  +EI+++     P + + + 
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 73  SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL  +G +K++DFG++          +T  GTP ++APEV+    YD S AD+WS 
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD-SKADIWSL 190
Query: 197 GVILFVLMAGYLPFGE 212
           G+    L  G  P  E
Sbjct: 191 GITAIELARGEPPHSE 206

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 30/226 (13%)
Query: 51  RMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND 110
           R++D  +R  S + I+  P  V+                     +LFD I  +G L E  
Sbjct: 120 RLLDWFERPDSFVLILERPEPVQ---------------------DLFDFITERGALQEEL 158
Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTT 169
            R +F Q+++AV HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +  V      
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--YTDF 216
Query: 170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC 229
            GT  Y  PE +    Y G +A VWS G++L+ ++ G +PF E D   +  ++   +   
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQR-- 273
Query: 230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
               S+    LI   L   P  R   E I+ HPW +    P + +E
Sbjct: 274 ---VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 316

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++            Q  +EI+++     P + + + 
Sbjct: 35  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 92
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 93  SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL  +G +K++DFG++          +T  GTP ++APEV+    YD S AD+WS 
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD-SKADIWSL 210
Query: 197 GVILFVLMAGYLPFGE 212
           G+    L  G  P  E
Sbjct: 211 GITAIELARGEPPHSE 226

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++            Q  +EI+++     P + + + 
Sbjct: 15  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 72
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 73  SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL  +G +K++DFG++          +   GTP ++APEV+    YD S AD+WS 
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD-SKADIWSL 190
Query: 197 GVILFVLMAGYLPFGE 212
           G+    L  G  P  E
Sbjct: 191 GITAIELARGEPPHSE 206

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 100/196 (51%), Gaps = 4/196 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++            Q  +EI+++     P + + + 
Sbjct: 30  IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYVTKYYG 87
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 88  SYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL  +G +K++DFG++          +   GTP ++APEV+    YD S AD+WS 
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD-SKADIWSL 205
Query: 197 GVILFVLMAGYLPFGE 212
           G+    L  G  P  E
Sbjct: 206 GITAIELARGEPPHSE 221

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 122/273 (44%), Gaps = 49/273 (17%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNI 71
             + +G G   KV    N+ T E  A+K+L            + +RE+ +  +  + P+I
Sbjct: 22  TSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------KARREVELHWRASQCPHI 73
Query: 72  VRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHC 125
           VR+ +V     A R  + I++E + GGELF +I  +G     E +     + + +A+ + 
Sbjct: 74  VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 126 HSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS  + HRD+KPENLL  S      LK++DFG +                      +  +
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----------------------KETT 171
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFSCPFW--FS 234
              YD S  D+WS GVI+++L+ GY PF    G    P +  +I     EF  P W   S
Sbjct: 172 GEKYDKS-CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 230
Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                LI  +L   P  R+ I     HPW  ++
Sbjct: 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 13  RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV +++   + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLS 182
           H  G+ HRD+KP N+L+ +   +KV DFG++ A+   G  +  T    GT  Y++PE   
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF-----WFSTG 236
               D   +DV+S G +L+ ++ G  PF G++ +   Y+ +   E   P        S  
Sbjct: 193 GDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR--EDPIPPSARHEGLSAD 249
Query: 237 ATSLIHKILDPNPKTR------IRIEGIRKH 261
             +++ K L  NP+ R      +R + +R H
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 136/305 (44%), Gaps = 47/305 (15%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R  + +E    +G+G F +V  A+N       A+K +  +       +  I  E+ ++  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLAS 58
Query: 66  VRHPNIVRLHEVLASR-------------TKVYIILEFVTGGELFDKIVHQGRLLE--ND 110
           + H  +VR +     R             + ++I +E+   G L+D ++H   L +  ++
Sbjct: 59  LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQRDE 117
Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH--- 167
             R F+Q+++A+++ HS+G+ HRDLKP N+ +D   N+K+ DFGL+    + +++L    
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 168 -----------TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDL 215
                      +  GT  YVA EVL   G+     D++S G+I F ++    PF    + 
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMER 234
Query: 216 PTLYKKINAAEFSCPFWFSTGATSLIHKI----LDPNPKTRIRIEGIRKHPWFRKNYNPV 271
             + KK+ +     P  F      +  KI    +D +P  R     +    W      PV
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL-----PV 289
Query: 272 KCSEE 276
           K  +E
Sbjct: 290 KHQDE 294

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T E VA+K++            Q  +EI+++     P I R   
Sbjct: 27  IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSPYITRYFG 84
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                TK++II+E++ GG   D ++  G L E       ++++  + + HS+   HRD+K
Sbjct: 85  SYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL   G++K++DFG++          +   GTP ++APEV+    YD   AD+WS 
Sbjct: 144 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD-FKADIWSL 202
Query: 197 GVILFVLMAGYLP 209
           G+    L  G  P
Sbjct: 203 GITAIELAKGEPP 215

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 13  RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV +++   + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLS 182
           H  G+ HRD+KP N+++ +   +KV DFG++ A+   G  +  T    GT  Y++PE   
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF-----WFSTG 236
               D   +DV+S G +L+ ++ G  PF G++ +   Y+ +   E   P        S  
Sbjct: 193 GDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR--EDPIPPSARHEGLSAD 249
Query: 237 ATSLIHKILDPNPKTR------IRIEGIRKH 261
             +++ K L  NP+ R      +R + +R H
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 31/231 (13%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMK 64
           R  +YE    +GEG FA V  A+++ T + VA+K   L   +  K  +     REI +++
Sbjct: 8   RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQ 67
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDAV 122
            + HPNI+ L +    ++ + ++ +F+      + I+    L+   +  + Y    +  +
Sbjct: 68  ELSHPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-------- 174
            + H   + HRDLKP NLLLD  G LK++DFGL+            + G+PN        
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA-----------KSFGSPNRAYXHQVV 174
Query: 175 ---YVAPEVLSNRGYDGSAADVWSCGVIL--FVLMAGYLPFGETDLPTLYK 220
              Y APE+L      G   D+W+ G IL   +L   +LP G++DL  L +
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP-GDSDLDQLTR 224

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 22/271 (8%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 30  RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 89
Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV +++   + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 90  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 149
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLS 182
           H  G+ HRD+KP N+++ +   +KV DFG++ A+   G  +  T    GT  Y++PE   
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF-----WFSTG 236
               D + +DV+S G +L+ ++ G  PF G++ +   Y+ +   E   P        S  
Sbjct: 210 GDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR--EDPIPPSARHEGLSAD 266
Query: 237 ATSLIHKILDPNPKTR------IRIEGIRKH 261
             +++ K L  NP+ R      +R + +R H
Sbjct: 267 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 297

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 13  RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV +++   + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLS 182
           H  G+ HRD+KP N+++ +   +KV DFG++ A+   G  +  T    GT  Y++PE   
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF-----WFSTG 236
               D   +DV+S G +L+ ++ G  PF G++ +   Y+ +   E   P        S  
Sbjct: 193 GDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR--EDPIPPSARHEGLSAD 249
Query: 237 ATSLIHKILDPNPKTR------IRIEGIRKH 261
             +++ K L  NP+ R      +R + +R H
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+GT+  V   ++      +A+K + +      R    +  EI++ K ++H NIV+   
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLG 86
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQ-GRLLEND--CRRYFQQLIDAVAHCHSKGVYHR 133
             +    + I +E V GG L   +  + G L +N+     Y +Q+++ + + H   + HR
Sbjct: 87  SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 134 DLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSA 190
           D+K +N+L+++Y G LK+SDFG S           T  GT  Y+APE++    RGY G A
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKA 205
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLP--TLYK-KINAAEFSCPFWFSTGATSLIHKILDP 247
           AD+WS G  +  +  G  PF E   P   ++K  +       P   S  A + I K  +P
Sbjct: 206 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEP 265
Query: 248 NPKTR 252
           +P  R
Sbjct: 266 DPDKR 270

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+GT+  V   ++      +A+K + +      R    +  EI++ K ++H NIV+   
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLG 72
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQ-GRLLEND--CRRYFQQLIDAVAHCHSKGVYHR 133
             +    + I +E V GG L   +  + G L +N+     Y +Q+++ + + H   + HR
Sbjct: 73  SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 134 DLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSA 190
           D+K +N+L+++Y G LK+SDFG S           T  GT  Y+APE++    RGY G A
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY-GKA 191
Query: 191 ADVWSCGVILFVLMAGYLPFGETDLP--TLYK-KINAAEFSCPFWFSTGATSLIHKILDP 247
           AD+WS G  +  +  G  PF E   P   ++K  +       P   S  A + I K  +P
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEP 251
Query: 248 NPKTR 252
           +P  R
Sbjct: 252 DPDKR 256

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 143/334 (42%), Gaps = 48/334 (14%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+  TIG G +  V  A+ R TG+ VA+K +  +  +      +  RE+ I+K  +H 
Sbjct: 55  EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLRELKILKHFKHD 113
Query: 70  NIVRLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAV 122
           NI+ + ++L           VY++L+ +       +I+H  + L  +  RYF  QL+  +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESD--LHQIIHSSQPLTLEHVRYFLYQLLRGL 171
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS----ALPQQGVELLHTTCGTPNYVAP 178
            + HS  V HRDLKP NLL++    LK+ DFG++      P +    +     T  Y AP
Sbjct: 172 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 231
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPFG---------------ETDLPTLYKKIN 223
           E++ +      A D+WS G I   ++A    F                 T  P + + + 
Sbjct: 232 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 291
Query: 224 AAEFSC---------PFWFST-------GATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
           A              P  + T        A SL+ ++L   P  RI      +HP+  K 
Sbjct: 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351
Query: 268 YNP---VKCSEEEEVNLDDVHAVFDDIEDQYVAE 298
           ++P     C+   +   D      + I++  VAE
Sbjct: 352 HDPDDEPDCAPPFDFAFDREALTRERIKEAIVAE 385

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRHPNIVRL 74
           +GEGT+A V   +++ T   VA+K +     L+H         RE+S++K ++H NIV L
Sbjct: 10  LGEGTYATVYKGKSKLTDNLVALKEIR----LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQ-----GRLLE-NDCRRYFQQLIDAVAHCHSK 128
           H+++ +   + ++ E++      DK + Q     G ++  ++ + +  QL+  +A+CH +
Sbjct: 66  HDIIHTEKSLTLVFEYL------DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V HRDLKP+NLL++  G LK++DFGL+       +       T  Y  P++L       
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 189 SAADVWSCGVILFVLMAGYLPF-------------------GETDLPTL-----YKKINA 224
           +  D+W  G I + +  G   F                    E   P +     +K  N 
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239
Query: 225 AEFS-------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            ++         P   S GA  L+ K+L    + RI  E   KHP+F
Sbjct: 240 PKYRAEALLSHAPRLDSDGA-DLLTKLLQFEGRNRISAEDAMKHPFF 285

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 22/271 (8%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 13  RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV ++    + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 73  AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLS 182
           H  G+ HRD+KP N+++ +   +KV DFG++ A+   G  +  T    GT  Y++PE   
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF-----WFSTG 236
               D   +DV+S G +L+ ++ G  PF G++ +   Y+ +   E   P        S  
Sbjct: 193 GDSVDAR-SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR--EDPIPPSARHEGLSAD 249
Query: 237 ATSLIHKILDPNPKTR------IRIEGIRKH 261
             +++ K L  NP+ R      +R + +R H
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 22/271 (8%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 13  RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV +++   + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 73  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLS 182
           H  G+ HRD+KP N+++ +   +KV DFG++ A+   G  +  T    GT  Y++PE   
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF-----WFSTG 236
               D + +DV+S G +L+ ++ G  PF G++     Y+ +   E   P        S  
Sbjct: 193 GDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR--EDPIPPSARHEGLSAD 249
Query: 237 ATSLIHKILDPNPKTR------IRIEGIRKH 261
             +++ K L  NP+ R      +R + +R H
Sbjct: 250 LDAVVLKALAKNPENRYQTAAEMRADLVRVH 280

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 143/334 (42%), Gaps = 48/334 (14%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+  TIG G +  V  A+ R TG+ VA+K +  +  +      +  RE+ I+K  +H 
Sbjct: 56  EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTN-AKRTLRELKILKHFKHD 114
Query: 70  NIVRLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAV 122
           NI+ + ++L           VY++L+ +       +I+H  + L  +  RYF  QL+  +
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESD--LHQIIHSSQPLTLEHVRYFLYQLLRGL 172
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS----ALPQQGVELLHTTCGTPNYVAP 178
            + HS  V HRDLKP NLL++    LK+ DFG++      P +    +     T  Y AP
Sbjct: 173 KYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP 232
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPFG---------------ETDLPTLYKKIN 223
           E++ +      A D+WS G I   ++A    F                 T  P + + + 
Sbjct: 233 ELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG 292
Query: 224 AAEFSC---------PFWFST-------GATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
           A              P  + T        A SL+ ++L   P  RI      +HP+  K 
Sbjct: 293 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 352
Query: 268 YNP---VKCSEEEEVNLDDVHAVFDDIEDQYVAE 298
           ++P     C+   +   D      + I++  VAE
Sbjct: 353 HDPDDEPDCAPPFDFAFDREALTRERIKEAIVAE 386

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 135/305 (44%), Gaps = 47/305 (15%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R  + +E    +G+G F +V  A+N       A+K +  +       +  I  E+ ++  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLAS 58
Query: 66  VRHPNIVRLHEVLASR-------------TKVYIILEFVTGGELFDKIVHQGRLLE--ND 110
           + H  +VR +     R             + ++I +E+     L+D ++H   L +  ++
Sbjct: 59  LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQRDE 117
Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH--- 167
             R F+Q+++A+++ HS+G+ HRDLKP N+ +D   N+K+ DFGL+    + +++L    
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 168 -----------TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDL 215
                      +  GT  YVA EVL   G+     D++S G+I F ++    PF    + 
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI---YPFSTGMER 234
Query: 216 PTLYKKINAAEFSCPFWFSTGATSLIHKI----LDPNPKTRIRIEGIRKHPWFRKNYNPV 271
             + KK+ +     P  F      +  KI    +D +P  R     +    W      PV
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL-----PV 289
Query: 272 KCSEE 276
           K  +E
Sbjct: 290 KHQDE 294

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 50/308 (16%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR--------- 51
           +K++ + +  Y + RT+ +G F K+   +  +  +  A+K   KS + K R         
Sbjct: 23  VKEKDKYINDYRIIRTLNQGKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 52  -----MVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRL 106
                  D  K E+ I+  +++   +    ++ +  +VYII E++    +  K      +
Sbjct: 81  ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSIL-KFDEYFFV 139
Query: 107 LENDCRRYF---------QQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLS 156
           L+ +   +          + ++++ ++ H+ K + HRD+KP N+L+D  G +K+SDFG S
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 157 ALPQQGVELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFG-ETD 214
                  + +  + GT  ++ PE  SN   Y+G+  D+WS G+ L+V+    +PF  +  
Sbjct: 200 EYMVD--KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257
Query: 215 LPTLYKKINAAEFSCPF-------------------WFSTGATSLIHKILDPNPKTRIRI 255
           L  L+  I       P                    + S      +   L  NP  RI  
Sbjct: 258 LVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITS 317
Query: 256 EGIRKHPW 263
           E   KH W
Sbjct: 318 EDALKHEW 325

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           T+    +E+   +G G F  V    +++TGE VA+K   +    K+R  ++   EI IMK
Sbjct: 10  TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMK 67
Query: 65  IVRHPNIVRLHEV------LASRTKVYIILEFVTGGEL---FDKIVHQGRLLENDCRRYF 115
            + HPN+V   EV      LA      + +E+  GG+L    ++  +   L E   R   
Sbjct: 68  KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 127
Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNL---KVSDFGLSALPQQGVELLHTTCGT 172
             +  A+ + H   + HRDLKPEN++L         K+ D G +    QG EL     GT
Sbjct: 128 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGT 186
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
             Y+APE+L  + Y     D WS G + F  + G+ PF
Sbjct: 187 LQYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPF 223

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 16/218 (7%)
Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           T+    +E+   +G G F  V    +++TGE VA+K   +    K+R  ++   EI IMK
Sbjct: 11  TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNR--ERWCLEIQIMK 68
Query: 65  IVRHPNIVRLHEV------LASRTKVYIILEFVTGGEL---FDKIVHQGRLLENDCRRYF 115
            + HPN+V   EV      LA      + +E+  GG+L    ++  +   L E   R   
Sbjct: 69  KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL 128
Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNL---KVSDFGLSALPQQGVELLHTTCGT 172
             +  A+ + H   + HRDLKPEN++L         K+ D G +    QG EL     GT
Sbjct: 129 SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGT 187
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
             Y+APE+L  + Y     D WS G + F  + G+ PF
Sbjct: 188 LQYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPF 224

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 4/193 (2%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG+G+F +V    +  T + VA+K++            Q  +EI+++       + + + 
Sbjct: 31  IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQ--QEITVLSQCDSSYVTKYYG 88
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
                +K++II+E++ GG   D ++  G   E       ++++  + + HS+   HRD+K
Sbjct: 89  SYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 137 PENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSC 196
             N+LL   G++K++DFG++          +T  GTP ++APEV+    YD S AD+WS 
Sbjct: 148 AANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYD-SKADIWSL 206
Query: 197 GVILFVLMAGYLP 209
           G+    L  G  P
Sbjct: 207 GITAIELAKGEPP 219

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 149/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T      I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 25/277 (9%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHP 69
           +E+   +G GT+ +V   ++ +TG+  A+KV+  +   +    ++IK+EI+++K    H 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE----EEIKQEINMLKKYSHHR 81
Query: 70  NIVRLHEVLASRT------KVYIILEFVTGGELFDKIVH-QGRLLENDCRRYF-QQLIDA 121
           NI   +     +       ++++++EF   G + D I + +G  L+ +   Y  ++++  
Sbjct: 82  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           ++H H   V HRD+K +N+LL     +K+ DFG+SA   + V   +T  GTP ++APEV+
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201
Query: 182 S-----NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT----LYKKINAAEFSCPFW 232
           +     +  YD   +D+WS G+    +  G  P  +   P     L  +  A       W
Sbjct: 202 ACDENPDATYD-FKSDLWSLGITAIEMAEGAPPLCDMH-PMRALFLIPRNPAPRLKSKKW 259
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN 269
            S    S I   L  N   R   E + KHP+ R   N
Sbjct: 260 -SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPN 295

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 53/319 (16%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           + +++   +GEG +  V  A ++ TGE VA+K +      K     +  REI I+K  +H
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKH 68
Query: 69  PNIVRLHEV-----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
            NI+ +  +       +  +VYII E +       +++    L ++  + +  Q + AV 
Sbjct: 69  ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL----------PQQGVELLHTTCGTP 173
             H   V HRDLKP NLL++S  +LKV DFGL+ +          P      +     T 
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVIL------------------FVLMAGYL--PFGET 213
            Y APEV+        A DVWSCG IL                   +L+ G +  P  + 
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 214 DLPTLYKKINAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRK 260
           DL  + +   A E+  S P +            +     L+ ++L  +P  RI  +   +
Sbjct: 247 DLRCI-ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 261 HPWFRKNYNPVKCSEEEEV 279
           HP+ +  ++P    E E +
Sbjct: 306 HPYLQTYHDPNDEPEGEPI 324

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 138/319 (43%), Gaps = 53/319 (16%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           + +++   +GEG +  V  A ++ TGE VA+K +      K     +  REI I+K  +H
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKH 68
Query: 69  PNIVRLHEV-----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
            NI+ +  +       +  +VYII E +       +++    L ++  + +  Q + AV 
Sbjct: 69  ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV----ELLHTTCGTPNYV--- 176
             H   V HRDLKP NLL++S  +LKV DFGL+ +  +      E      G   YV   
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 177 ---APEVLSNRGYDGSAADVWSCGVIL------------------FVLMAGYL--PFGET 213
              APEV+        A DVWSCG IL                   +L+ G +  P  + 
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 214 DLPTLYKKINAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRK 260
           DL  + +   A E+  S P +            +     L+ ++L  +P  RI  +   +
Sbjct: 247 DLRCI-ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 261 HPWFRKNYNPVKCSEEEEV 279
           HP+ +  ++P    E E +
Sbjct: 306 HPYLQTYHDPNDEPEGEPI 324

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 141/322 (43%), Gaps = 54/322 (16%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRH 68
           +Y   + IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH
Sbjct: 44  RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIK---KISPFEHQTYCQRTLREIQILLRFRH 100
Query: 69  PNIVRLHEVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAV 122
            N++ + ++L + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  +
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQ--LSNDHICYFLYQILRGL 157
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPE 179
            + HS  V HRDLKP NLL+++  +LK+ DFGL+  A P+      L     T  Y APE
Sbjct: 158 KYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 180 VLSN-RGYDGSAADVWSCGVILFVLMAGYLPF---------------------------- 210
           ++ N +GY  S  D+WS G IL  +++    F                            
Sbjct: 218 IMLNSKGYTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 211 ---GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                  L +L  K   A         + A  L+ ++L  NP  RI +E    HP+  + 
Sbjct: 277 NMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQY 336
Query: 268 YNPVKCSEEEE-----VNLDDV 284
           Y+P      EE     + LDD+
Sbjct: 337 YDPTDEPVAEEPFTFAMELDDL 358

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 23  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 75
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 76  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 193
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 242
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 243 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 302
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 303 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 344

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 86
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 87  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 204
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 253
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 254 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 313
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 314 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 355

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 41  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 93
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 94  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 121 AVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 211
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 260
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 261 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 320
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 321 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 362

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 30  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 82
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 83  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 121 AVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 200
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 249
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 250 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 309
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 310 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 351

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 8   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 63
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII+EF+T G L D +    R   N     +   Q+  
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 183
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 184 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 34  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 86
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 87  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 121 AVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 204
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 253
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 254 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 313
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 314 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 355

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 108
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 121 AVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 226
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 275
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 336 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 377

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 26  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 78
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 79  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 196
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 245
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 246 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 305
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 306 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 347

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 16/231 (6%)
Query: 1   MKKQTRRVAKYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV 53
           M   +    K+E+ RT       +G G + +V     ++   +VA+K L + T+     V
Sbjct: 3   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 58
Query: 54  DQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
           ++  +E ++MK ++HPN+V+L  V       YII+EF+T G L D +    R   N    
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 114 YFQ--QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG 171
            +   Q+  A+ +   K   HRDL   N L+     +KV+DFGLS L        H    
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 172 TP-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            P  + APE L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 179 FPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VY++   + G +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 164
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 165 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 225 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 283
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 284 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 339

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 35  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 87
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 88  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 121 AVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 205
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 254
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 255 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 314
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 315 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 356

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 53/319 (16%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           + +++   +GEG +  V  A ++ TGE VA+K +      K     +  REI I+K  +H
Sbjct: 11  SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKHFKH 68
Query: 69  PNIVRLHEV-----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
            NI+ +  +       +  +VYII E +       +++    L ++  + +  Q + AV 
Sbjct: 69  ENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG----------TP 173
             H   V HRDLKP NLL++S  +LKV DFGL+ +  +         G          T 
Sbjct: 127 VLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVIL------------------FVLMAGYL--PFGET 213
            Y APEV+        A DVWSCG IL                   +L+ G +  P  + 
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246
Query: 214 DLPTLYKKINAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRK 260
           DL  + +   A E+  S P +            +     L+ ++L  +P  RI  +   +
Sbjct: 247 DLRCI-ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305
Query: 261 HPWFRKNYNPVKCSEEEEV 279
           HP+ +  ++P    E E +
Sbjct: 306 HPYLQTYHDPNDEPEGEPI 324

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 56  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 108
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 226
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 275
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 336 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 377

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 50  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 102
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 121 AVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 220
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 269
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 270 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 329
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 330 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 371

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 58  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 110
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 228
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 277
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 278 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 337
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 338 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 379

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 1   MKKQTRRVAKYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV 53
           M   +    K+E+ RT       +G G + +V     ++   +VA+K L + T+     V
Sbjct: 3   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 58
Query: 54  DQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
           ++  +E ++MK ++HPN+V+L  V       YII EF+T G L D +    R   N    
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 114 YFQ--QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG 171
            +   Q+  A+ +   K   HRDL   N L+     +KV+DFGLS L        H    
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAK 178
Query: 172 TP-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            P  + APE L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 179 FPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 27  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 79
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 80  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 197
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 246
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 247 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 307 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 348

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R IG G+F  V FA++    E VA+K ++ S    +     I +E+  ++ +RHPN ++ 
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                     ++++E+  G       VH+  L E +        +  +A+ HS  + HRD
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV---LSNRGYDGSAA 191
           +K  N+LL   G +K+ DFG +++    +   +   GTP ++APEV   +    YDG   
Sbjct: 180 VKAGNILLSEPGLVKLGDFGSASI----MAPANXFVGTPYWMAPEVILAMDEGQYDGK-V 234
Query: 192 DVWSCGVILFVLMAGYLP-FGETDLPTLY 219
           DVWS G+    L     P F    +  LY
Sbjct: 235 DVWSLGITCIELAERKPPLFNMNAMSALY 263

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 149/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T      I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 153
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 271
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 320
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 321 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 380
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 381 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 422

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 130/309 (42%), Gaps = 48/309 (15%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + IG G    V  A +   G +VA+K L++          +  RE+ ++K V H 
Sbjct: 23  RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHK 81
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAHCH 126
           NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H H
Sbjct: 82  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 141
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   GY
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF-MMTPYVVTRYYRAPEVILGMGY 200
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI------NAAEFSC----------- 229
             +  D+WS G I+  L+ G + F  TD    + K+       +AEF             
Sbjct: 201 KEN-VDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVE 259
Query: 230 --------------PFWF-----------STGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
                         P W            ++ A  L+ K+L  +P  RI ++   +HP+ 
Sbjct: 260 NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
Query: 265 RKNYNPVKC 273
              Y+P + 
Sbjct: 320 TVWYDPAEA 328

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 9/209 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R IG G+F  V FA++    E VA+K ++ S    +     I +E+  ++ +RHPN ++ 
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                     ++++E+  G       VH+  L E +        +  +A+ HS  + HRD
Sbjct: 81  RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV---LSNRGYDGSAA 191
           +K  N+LL   G +K+ DFG +++    +   +   GTP ++APEV   +    YDG   
Sbjct: 141 VKAGNILLSEPGLVKLGDFGSASI----MAPANXFVGTPYWMAPEVILAMDEGQYDGK-V 195
Query: 192 DVWSCGVILFVLMAGYLP-FGETDLPTLY 219
           DVWS G+    L     P F    +  LY
Sbjct: 196 DVWSLGITCIELAERKPPLFNMNAMSALY 224

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 149/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 74
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    +  VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 75  IVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR-YYRAPE 192
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 241
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 302 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 343

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 150/345 (43%), Gaps = 50/345 (14%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K+R       E+ IM+ + H N
Sbjct: 60  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHCN 112
Query: 71  IVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEN----DCRRYFQQLID 120
           IVRL     S    + +VY+  +L++V    ++    H  R  +       + Y  QL  
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 121 AVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C    Y APE
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR-YYRAPE 230
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGAT 238
           ++       S+ DVWS G +L  L+ G   F G++ +  L + I               T
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL-----------GT 279
Query: 239 SLIHKILDPNPK-TRIRIEGIRKHPW---FRKNYNP---VKCSEEEEVNLDD-------- 283
               +I + NP  T  +   I+ HPW   FR    P     CS   E             
Sbjct: 280 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 339
Query: 284 VHAVFDDIEDQYVAEQSENKVGGPLLMNAFEMITLSQGLNLAALF 328
            H+ FD++ D  V  +  N    P L N F    LS    LA + 
Sbjct: 340 AHSFFDELRDPNV--KLPNGRDTPALFN-FTTQELSSNPPLATIL 381

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 135/281 (48%), Gaps = 33/281 (11%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           K   +R   Y   + IG G+F  V  A+  E+ E VA+K + +    K+R       E+ 
Sbjct: 33  KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNR-------ELQ 84
Query: 62  IMKIVRHPNIVRLHEVLAS----RTKVYI--ILEFVTGGELFDKIVHQGRLLEND----C 111
           IM+IV+HPN+V L     S    + +V++  +LE+V    ++    H  +L +       
Sbjct: 85  IMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLI 143
Query: 112 RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTC 170
           + Y  QL+ ++A+ HS G+ HRD+KP+NLLLD   G LK+ DFG + +   G   +   C
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC 203
Query: 171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSC 229
               Y APE++       +  D+WS G ++  LM G   F GE+ +  L + I       
Sbjct: 204 SR-YYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV----- 257
Query: 230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
                T +   I K ++PN     +   IR HP F K + P
Sbjct: 258 ---LGTPSREQI-KTMNPN-YMEHKFPQIRPHP-FSKVFRP 292

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 130/308 (42%), Gaps = 48/308 (15%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + IG G    V  A +   G +VA+K L++          +  RE+ ++K V H 
Sbjct: 25  RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHK 83
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAHCH 126
           NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H H
Sbjct: 84  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH 143
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   GY
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILGMGY 202
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI------NAAEFSC----------- 229
             +  D+WS G I+  L+ G + F  TD    + K+       +AEF             
Sbjct: 203 -AANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVE 261
Query: 230 --------------PFWF-----------STGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
                         P W            ++ A  L+ K+L  +P  RI ++   +HP+ 
Sbjct: 262 NRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
Query: 265 RKNYNPVK 272
              Y+P +
Sbjct: 322 TVWYDPAE 329

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 90  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 146
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 147 VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 186 YDGSAADVWSCGVILFVLMAG--------YLP--------FGETDLPTLYKKINAAE--- 226
           Y  S  D+WS G IL  +++         YL          G      L   IN      
Sbjct: 207 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNY 265
Query: 227 -FSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 266 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDP 321

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK+V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 68  HPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQL 118
           H NI+ L  V   +        VYI++E      L D  + Q   +E D  R      Q+
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVME------LMDANLSQVIQMELDHERMSYLLYQM 135
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVA 177
           +  + H HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y A
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           PEV+   GY  +  D+WS GVI+  ++ G + F  TD
Sbjct: 194 PEVILGMGYKEN-VDIWSVGVIMGEMIKGGVLFPGTD 229

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 1   MKKQTRRVAKYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV 53
           M   +    K+E+ RT       +G G + +V     ++   +VA+K L + T+     V
Sbjct: 3   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 58
Query: 54  DQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
           ++  +E ++MK ++HPN+V+L  V       YII EF+T G L D +    R   N    
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 114 YFQ--QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG 171
            +   Q+  A+ +   K   HRDL   N L+     +KV+DFGLS L        H    
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 172 TP-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            P  + APE L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 179 FPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 186 YDGSAADVWSCGVILFVLMAG--------YLP--------FGETDLPTLYKKINAAE--- 226
           Y  S  D+WS G IL  +++         YL          G      L   IN      
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNY 263
Query: 227 -FSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 264 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 186 YDGSAADVWSCGVILFVLMAG--------YLP--------FGETDLPTLYKKINAAE--- 226
           Y  S  D+WS G IL  +++         YL          G      L   IN      
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNY 263
Query: 227 -FSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 264 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYXQRTLREIKILLRFRHENIIGIN 91
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 148
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 9   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 64
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 9   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 64
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 11  KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 66
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 67  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 187 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 20  KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 75
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 76  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 196 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 236

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 1   MKKQTRRVAKYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV 53
           M   +    K+E+ RT       +G G + +V     ++   +VA+K L + T+     V
Sbjct: 3   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 58
Query: 54  DQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
           ++  +E ++MK ++HPN+V+L  V       YII EF+T G L D +    R   N    
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 118
Query: 114 YFQ--QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG 171
            +   Q+  A+ +   K   HRDL   N L+     +KV+DFGLS L        H    
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 172 TP-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            P  + APE L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 179 FPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 148
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 93  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 149
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKG 209
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 210 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 268
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 269 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 324

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 88.6 bits (218), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 47/305 (15%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R  + +E    +G+G F +V  A+N       A+K +  +       +  I  E+ ++  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVXLLAS 58
Query: 66  VRHPNIVRLHEVLASR-------------TKVYIILEFVTGGELFDKIVHQGRLLE--ND 110
           + H  +VR +     R             + ++I  E+     L+D ++H   L +  ++
Sbjct: 59  LNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQRDE 117
Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH--- 167
             R F+Q+++A+++ HS+G+ HR+LKP N+ +D   N+K+ DFGL+    + +++L    
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 168 -----------TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDL 215
                      +  GT  YVA EVL   G+     D +S G+I F  +    PF    + 
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXER 234
Query: 216 PTLYKKINAAEFSCPFWFSTGATSLIHKI----LDPNPKTRIRIEGIRKHPWFRKNYNPV 271
             + KK+ +     P  F      +  KI    +D +P  R     +    W      PV
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL-----PV 289
Query: 272 KCSEE 276
           K  +E
Sbjct: 290 KHQDE 294

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK+V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 68  HPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQL 118
           H NI+ L  V   +        VYI++E      L D  + Q   +E D  R      Q+
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVME------LMDANLSQVIQMELDHERMSYLLYQM 135
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVA 177
           +  + H HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y A
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           PEV+   GY  +  D+WS GVI+  ++ G + F  TD
Sbjct: 194 PEVILGMGYKEN-VDIWSVGVIMGEMIKGGVLFPGTD 229

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLAFRHENIIGIN 89
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 90  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 146
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 207 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 265
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 266 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDP 321

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 145 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 263
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 264 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 86  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 142
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 186 YDGSAADVWSCGVILFVLMAG--------YLP--------FGETDLPTLYKKINAAE--- 226
           Y  S  D+WS G IL  +++         YL          G  +   L   IN      
Sbjct: 203 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNY 261
Query: 227 -FSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 262 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 317

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 263
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 264 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 33  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 89
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 90  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 146
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 206
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 207 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 265
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 266 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 321

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           G  +G+G F +     +RETGE + MK L +      R      +E+ +M+ + HPN+++
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQR---TFLKEVKVMRCLEHPNVLK 71
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKGVYH 132
              VL    ++  I E++ GG L   I           R  F + +   +A+ HS  + H
Sbjct: 72  FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSAL------PQQGVELL--------HTTCGTPNYVAP 178
           RDL   N L+    N+ V+DFGL+ L        +G+  L        +T  G P ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 179 EVLSNRGYDGSAADVWSCGVIL 200
           E+++ R YD    DV+S G++L
Sbjct: 192 EMINGRSYD-EKVDVFSFGIVL 212

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 148
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 149 VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 29  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 85
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 86  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 142
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 143 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 203 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 261
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 262 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 317

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 39  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 95
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 96  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 152
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 212
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 213 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 271
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 272 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 327

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 31  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 87
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 88  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 204
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 205 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 263
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 264 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 319

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 36  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 92
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 93  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 149
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 150 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 209
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 210 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 268
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 269 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 324

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 37  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 93
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 94  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 150
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 151 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 210
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 211 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 269
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 270 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 325

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 28  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 84
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 85  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 141
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 142 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 201
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 202 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 260
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 261 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 316

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 148
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII+EF+T G L D +    R   +     +   Q+  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 51  IGEGAYGMVCSAYDNVNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 107
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 164
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 165 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 224
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 225 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 283
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 284 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 339

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 108/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII+EF+T G L D +    R   +     +   Q+  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKCQH--LSNDHICYFLYQILRGLKYIHSAN 148
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-P 69
           Y++ R +G G +++V  A N    E V +K      ILK    ++IKREI I++ +R  P
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKNKIKREIKILENLRGGP 92
Query: 70  NIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           NI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +CH
Sbjct: 93  NIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYCH 148
Query: 127 SKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           S G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L +  
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQ 207
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
               + D+WS G +L  ++    PF
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 49/296 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRHPNIVRLH 75
           IGEG +  V  A +      VA++   K +  +H+   Q   REI I+   RH NI+ ++
Sbjct: 35  IGEGAYGMVCSAYDNLNKVRVAIR---KISPFEHQTYCQRTLREIKILLRFRHENIIGIN 91
Query: 76  EVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           +++ + T      VYI+ + +   +L+  +  Q   L ND   YF  Q++  + + HS  
Sbjct: 92  DIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSAN 148
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQG-VELLHTTCGTPNYVAPEVLSN-RG 185
           V HRDLKP NLLL++  +LK+ DFGL+  A P       L     T  Y APE++ N +G
Sbjct: 149 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKG 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-------------------GETDLPTLYK-KINAA 225
           Y  S  D+WS G IL  +++    F                    + DL  +   K    
Sbjct: 209 YTKS-IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 226 EFSCPF-----W------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             S P      W        + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 268 LLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 323

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   +     +   Q+  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 110/233 (47%), Gaps = 18/233 (7%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           ++ R IG G F +V   + +  G+   +VA+K L      K R       E SIM    H
Sbjct: 46  KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRR--DFLCEASIMGQFDH 103
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCH 126
           PN+V L  V+     V I++EF+  G L D  +  H G+          + +   + +  
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSN 183
             G  HRDL   N+L++S    KVSDFGLS + +   E ++TT G      + APE +  
Sbjct: 163 DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 184 RGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKIN-----AAEFSCP 230
           R +  SA+DVWS G++++ +M+ G  P+ +     + K I       A   CP
Sbjct: 223 RKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCP 274

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 109/231 (47%), Gaps = 16/231 (6%)
Query: 1   MKKQTRRVAKYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV 53
           M   +    K+E+ RT       +G G + +V     ++   +VA+K L + T+     V
Sbjct: 3   MDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EV 58
Query: 54  DQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
           ++  +E ++MK ++HPN+V+L  V       YII EF+T G L D +    R   +    
Sbjct: 59  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 118
Query: 114 YFQ--QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG 171
            +   Q+  A+ +   K   HRDL   N L+     +KV+DFGLS L        H    
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 172 TP-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            P  + APE L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 179 FPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK+V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 68  HPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQL 118
           H NI+ L  V   +        VYI++E      L D  + Q   +E D  R      Q+
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVME------LMDANLSQVIQMELDHERMSYLLYQM 135
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVA 177
           +  + H HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y A
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           PEV+   GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 194 PEVILGMGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 7   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 62
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   +     +   Q+  
Sbjct: 63  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK+V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 54/324 (16%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           A Y   + +G G +  V  A +  TG  VA+K L +          +  RE+ ++K +RH
Sbjct: 25  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRH 83
Query: 69  PNIVRL------HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
            N++ L       E L   T  Y+++ F+  G    K++   +L E+  +    Q++  +
Sbjct: 84  ENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGL 141
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + H+ G+ HRDLKP NL ++    LK+ DFGL+   +Q    +     T  Y APEV+ 
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMXGXVVTRWYRAPEVIL 198
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------------------- 214
           N        D+WS G I+  ++ G   F  +D                            
Sbjct: 199 NWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258
Query: 215 ------LPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY 268
                 LP L KK  A+  +     S  A +L+ K+L  + + R+       HP+F   +
Sbjct: 259 KNYMKGLPELEKKDFASILTNA---SPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315
Query: 269 NPVKCSEEEEVNLDDVHAVFDDIE 292
           +      E+E  +      FDD++
Sbjct: 316 D-----TEDEPQVQKYDDSFDDVD 334

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 253 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 308
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HR+L   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 429 SLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 469

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/197 (33%), Positives = 95/197 (48%), Gaps = 16/197 (8%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           +G  IG G F +V   + R     VA+K   ++  L   +  +  +E  I+K   HPNIV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIV 175
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA---HCHSKG 129
           RL  V   +  +YI++E V GG+    +  +G  L    +   Q + DA A   +  SK 
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLR--VKTLLQMVGDAAAGMEYLESKC 233
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG----TP-NYVAPEVLSNR 184
             HRDL   N L+     LK+SDFG+S     GV   +   G     P  + APE L N 
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV---YAASGGLRQVPVKWTAPEAL-NY 289
Query: 185 GYDGSAADVWSCGVILF 201
           G   S +DVWS G++L+
Sbjct: 290 GRYSSESDVWSFGILLW 306

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G F +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 5   KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 60
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   +     +   Q+  
Sbjct: 61  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   D   +Y+
Sbjct: 181 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVRHPNIV 72
           R +G G +  V  A +    + VA+K L++   +++  R   +  RE+ ++K ++H N++
Sbjct: 34  RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHLKHENVI 90
Query: 73  RLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            L +V    T      +VY++   +  G   + IV    L +   +    QL+  + + H
Sbjct: 91  GLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+ ++    L++ DFGL+   +Q  E +     T  Y APE++ N  +
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
                D+WS G I+  L+ G   F  +D     K+I
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 5   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 60
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII+EF+T G L D +    R   +     +   Q+  
Sbjct: 61  MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   D   +Y+
Sbjct: 181 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           +G  IG G F +V   + R     VA+K   ++  L   +  +  +E  I+K   HPNIV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIV 175
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA---HCHSKG 129
           RL  V   +  +YI++E V GG+    +  +G  L    +   Q + DA A   +  SK 
Sbjct: 176 RLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLR--VKTLLQMVGDAAAGMEYLESKC 233
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC-GTP-NYVAPEVLSNRGYD 187
             HRDL   N L+     LK+SDFG+S     GV          P  + APE L N G  
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL-NYGRY 292
Query: 188 GSAADVWSCGVILF 201
            S +DVWS G++L+
Sbjct: 293 SSESDVWSFGILLW 306

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 76  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-SH 193
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 194 ASDTWMFGVTLW 205

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 75
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRG 133
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 190
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 80  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-SH 197
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 198 ASDTWMFGVTLW 209

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 20  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 80  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 138
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 139 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-SH 197
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 198 ASDTWMFGVTLW 209

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 76  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-SH 193
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 194 ASDTWMFGVTLW 205

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 86  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF-SH 203
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 204 ASDTWMFGVTLW 215

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 16  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 76  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 134
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 135 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF-SH 193
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 194 ASDTWMFGVTLW 205

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 9/192 (4%)
Query: 17  IGEGTFAKVRFAQ-NRETGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G+G+F  VR  + +  +G+  SVA+K L    + +   +D   RE++ M  + H N++R
Sbjct: 26  LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           L+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK   H
Sbjct: 86  LYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIH 144
Query: 133 RDLKPENLLLDSYGNLKVSDFGL-SALPQQGVE-LLHTTCGTP-NYVAPEVLSNRGYDGS 189
           RDL   NLLL +   +K+ DFGL  ALPQ     ++      P  + APE L  R +   
Sbjct: 145 RDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF-SH 203
Query: 190 AADVWSCGVILF 201
           A+D W  GV L+
Sbjct: 204 ASDTWMFGVTLW 215

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 9   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 64
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 65  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L              P  + APE
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 99
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMXGXVATRWYRAPEIM 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 8   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 63
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   N     +   Q+  
Sbjct: 64  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L              P  + APE
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 184 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 84.7 bits (208), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 86
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWYRAPEIM 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 86
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWYRAPEIM 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVRHPNIV 72
           R +G G +  V  A +    + VA+K L++   +++  R   +  RE+ ++K ++H N++
Sbjct: 34  RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHLKHENVI 90
Query: 73  RLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            L +V    T      +VY++   +  G   + IV    L +   +    QL+  + + H
Sbjct: 91  GLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+ ++    L++ DFGL+   +Q  E +     T  Y APE++ N  +
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
                D+WS G I+  L+ G   F  +D     K+I
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 86
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGYVATRWYRAPEIM 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 128/312 (41%), Gaps = 50/312 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 262 PWFRKNYNPVKC 273
           P+    Y+P + 
Sbjct: 319 PYINVWYDPAEV 330

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL    +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLC---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 81
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 196
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 18/257 (7%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G++ +V   +++E G   A+K              ++    S  K+ +HP  VRL +
Sbjct: 65  LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
                  +Y+  E + G  L       G  L E     Y +  + A+AH HS+G+ H D+
Sbjct: 125 AWEEGGILYLQTE-LCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDV 183
Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT-----PNYVAPEVLSNRGYDGSA 190
           KP N+ L   G  K+ DFGL       VEL     G      P Y+APE+L  +G  G+A
Sbjct: 184 KPANIFLGPRGRCKLGDFGLL------VELGTAGAGEVQEGDPRYMAPELL--QGSYGTA 235
Query: 191 ADVWSCGV-ILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
           ADV+S G+ IL V     LP G      L +     EF+     S+   S++  +L+P+P
Sbjct: 236 ADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTA--GLSSELRSVLVMMLEPDP 293
Query: 250 KTRIRIEGIRKHPWFRK 266
           K R   E +   P  R+
Sbjct: 294 KLRATAEALLALPVLRQ 310

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 75
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 190
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 75
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAPEIM 190
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMAGFVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L+K   +I+  +   +  RE+ ++K ++
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK---RTYRELRLLKHMK 91
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 206
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    IG G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 84
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 199
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 85
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 200
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 99
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 319 PYINVWYDPAE 329

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 85
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 200
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 74
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 75  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKH 134
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 193 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 312 PYINVWYDPAE 322

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 89
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 90  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 147
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 204
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 237

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 11  RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLIDAVA 123
            HP+IV+L  V+ +   V+II+E  T GEL  +   Q R    D      Y  QL  A+A
Sbjct: 69  DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLS 182
           +  SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN 185
Query: 183 NRGYDGSAADVWSCGVILF-VLMAGYLPF 210
            R +  SA+DVW  GV ++ +LM G  PF
Sbjct: 186 FRRFT-SASDVWMFGVCMWEILMHGVKPF 213

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 98
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 99  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 213
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 246

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 269
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   +     +   Q+  
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HR+L   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y+
Sbjct: 390 SLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 47  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 104
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 105 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 163
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 224 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 274

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 129/317 (40%), Gaps = 50/317 (15%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 262 PWFRKNYNPVKCSEEEE 278
           P+    Y+P      +E
Sbjct: 319 PYINVWYDPAXXXXXDE 335

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 20  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 77
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 78  NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 197 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 247

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGXVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 16/216 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVRHPNIV 72
           R +G G +  V  A +    + VA+K L++   +++  R   +  RE+ ++K ++H N++
Sbjct: 26  RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHAR---RTYRELRLLKHLKHENVI 82
Query: 73  RLHEVLASRT------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            L +V    T      +VY++   +  G   + IV    L +   +    QL+  + + H
Sbjct: 83  GLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           S G+ HRDLKP N+ ++    L++ DFGL+   +Q  E +     T  Y APE++ N  +
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADEEMTGYVATRWYRAPEIMLNWMH 197
Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
                D+WS G I+  L+ G   F  +D     K+I
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 37  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 94
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 95  NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 153
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 213
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 214 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 264

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 19  RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 75
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+EF+  G L + +  H+ R+      +Y  Q+   + +  +
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 196 KF-SVASDVWSFGVVLYELFT 215

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 102
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMXGYVATRWYRAPEIM 217
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 90
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 91  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 205
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 238

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 84
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 199
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 76
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 77  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 191
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 224

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 75
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 190
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 223

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 85
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 200
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 85
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 143
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 200
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 233

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 76
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 77  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 134
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 191
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 224

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 77
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 78  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 135
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 192
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 225

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 448
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLIDAVA 123
            HP+IV+L  V+ +   V+II+E  T GEL  +   Q R    D      Y  QL  A+A
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLS 182
           +  SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 183 NRGYDGSAADVWSCGVILF-VLMAGYLPF 210
            R +  SA+DVW  GV ++ +LM G  PF
Sbjct: 566 FRRFT-SASDVWMFGVCMWEILMHGVKPF 593

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 84
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 199
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 78
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 79  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 136
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 193
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 226

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 72
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN---YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+ +  Q  E         +   + APE L+  
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES 192
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 193 KF-SVASDVWSFGVVLYELFT 212

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 16/222 (7%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 5   KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 60
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLID 120
           MK ++HPN+V+L  V       YII EF+T G L D +    R   +     +   Q+  
Sbjct: 61  MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
           A+ +   K   HRDL   N L+     +KV+DFGLS L        H     P  + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            L+   +    +DVW+ GV+L+ +   G  P+   D   +Y+
Sbjct: 181 SLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 86
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 144
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 201
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 84
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 142
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 199
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 232

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 91
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 206
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 91
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 206
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 239

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 81
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 196
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 81
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 196
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 11  RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 69  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 188 RFT-SASDVWMFGVCMWEILMHGVKPF 213

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 130/278 (46%), Gaps = 19/278 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 27  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 84
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 85  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 201
Query: 190 AADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAEFSCPFWFSTGATSL-----IHK 243
            +D+WS G+ L  +  G  P G  +    +++ ++      P    +G  SL     ++K
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNK 261
Query: 244 ILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
            L  NP  R  ++ +  H + ++       S+ EEV+ 
Sbjct: 262 CLIKNPAERADLKQLMVHAFIKR-------SDAEEVDF 292

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 90
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 91  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 205
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 238

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 33/215 (15%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMK-VLAKSTILKHRMVDQIKREISIMKIV 66
           V+KYE    IG+GTF +V  A++R+TG+ VA+K VL ++   K        REI I++++
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLL 73
Query: 67  RHPNIVRLHEVLASRTK--------VYIILEFVT---GGELFDKIVHQGRLLENDCRRYF 115
           +H N+V L E+  ++          +Y++ +F      G L + +V   +   ++ +R  
Sbjct: 74  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVM 130
Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN- 174
           Q L++ + + H   + HRD+K  N+L+   G LK++DFGL+    +   L   +   PN 
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA----RAFSLAKNS--QPNR 184
Query: 175 ---------YVAPEVLSNRGYDGSAADVWSCGVIL 200
                    Y  PE+L      G   D+W  G I+
Sbjct: 185 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 219

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 81
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 196
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 229

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 98
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 99  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 213
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 246

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 33/215 (15%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMK-VLAKSTILKHRMVDQIKREISIMKIV 66
           V+KYE    IG+GTF +V  A++R+TG+ VA+K VL ++   K        REI I++++
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLL 74
Query: 67  RHPNIVRLHEVLASRTK--------VYIILEFVT---GGELFDKIVHQGRLLENDCRRYF 115
           +H N+V L E+  ++          +Y++ +F      G L + +V   +   ++ +R  
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVM 131
Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN- 174
           Q L++ + + H   + HRD+K  N+L+   G LK++DFGL+    +   L   +   PN 
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA----RAFSLAKNS--QPNR 185
Query: 175 ---------YVAPEVLSNRGYDGSAADVWSCGVIL 200
                    Y  PE+L      G   D+W  G I+
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 99
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 214
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 247

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 229

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 33/215 (15%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMK-VLAKSTILKHRMVDQIKREISIMKIV 66
           V+KYE    IG+GTF +V  A++R+TG+ VA+K VL ++   K        REI I++++
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLL 74
Query: 67  RHPNIVRLHEVLASRTK--------VYIILEFVT---GGELFDKIVHQGRLLENDCRRYF 115
           +H N+V L E+  ++          +Y++ +F      G L + +V   +   ++ +R  
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVM 131
Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN- 174
           Q L++ + + H   + HRD+K  N+L+   G LK++DFGL+    +   L   +   PN 
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA----RAFSLAKNS--QPNR 185
Query: 175 ---------YVAPEVLSNRGYDGSAADVWSCGVIL 200
                    Y  PE+L      G   D+W  G I+
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 102
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 217
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 250

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 8/211 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 82
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 83  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 201 MGYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 230

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 33/215 (15%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMK-VLAKSTILKHRMVDQIKREISIMKIV 66
           V+KYE    IG+GTF +V  A++R+TG+ VA+K VL ++   K        REI I++++
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE--KEGFPITALREIKILQLL 74
Query: 67  RHPNIVRLHEVLASRTK--------VYIILEFVT---GGELFDKIVHQGRLLENDCRRYF 115
           +H N+V L E+  ++          +Y++ +F      G L + +V   +   ++ +R  
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVM 131
Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN- 174
           Q L++ + + H   + HRD+K  N+L+   G LK++DFGL+    +   L   +   PN 
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA----RAFSLAKNS--QPNR 185
Query: 175 ---------YVAPEVLSNRGYDGSAADVWSCGVIL 200
                    Y  PE+L      G   D+W  G I+
Sbjct: 186 YXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 220

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 106/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGL+ + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 124/275 (45%), Gaps = 36/275 (13%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRH 68
           +  V R + EG FA V  AQ+  +G   A+K L  +   K+R + Q   E+  MK +  H
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQ---EVCFMKKLSGH 85
Query: 69  PNIVRL--------HEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
           PNIV+          E    + +  ++ E   G   E   K+  +G L  +   + F Q 
Sbjct: 86  PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145
Query: 119 IDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFG------------LSALPQQGVE 164
             AV H H +   + HRDLK ENLLL + G +K+ DFG             SA  +  VE
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205
Query: 165 LLHTTCGTPNYVAPEV--LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
              T   TP Y  PE+  L +    G   D+W+ G IL++L     PF   D   L  +I
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF--EDGAKL--RI 261
Query: 223 NAAEFSCPFWFS--TGATSLIHKILDPNPKTRIRI 255
              ++S P   +  T   SLI  +L  NP+ R+ I
Sbjct: 262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSI 296

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 11  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 69  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 187
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 188 RFT-SASDVWMFGVCMWEILMHGVKPF 213

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 18/227 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQN-RETGESVAMKVLAKSTILKHRMVDQIKREISIMK---I 65
           +YE    IGEG + KV  A++ +  G  VA+K +   T  +   +  I RE+++++    
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI-REVAVLRHLET 70
Query: 66  VRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V   SRT    K+ ++ E V        DK+   G   E      FQ L
Sbjct: 71  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-L 129
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   HS  V HRDLKP+N+L+ S G +K++DFGL+ +    + L      T  Y AP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAP 188
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKIN 223
           EVL    Y  +  D+WS G I F  M    P   G +D+  L K ++
Sbjct: 189 EVLLQSSY-ATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILD 233

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 18/227 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQN-RETGESVAMKVLAKSTILKHRMVDQIKREISIMK---I 65
           +YE    IGEG + KV  A++ +  G  VA+K +   T  +   +  I RE+++++    
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI-REVAVLRHLET 70
Query: 66  VRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V   SRT    K+ ++ E V        DK+   G   E      FQ L
Sbjct: 71  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-L 129
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   HS  V HRDLKP+N+L+ S G +K++DFGL+ +    + L      T  Y AP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAP 188
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKIN 223
           EVL    Y  +  D+WS G I F  M    P   G +D+  L K ++
Sbjct: 189 EVLLQSSY-ATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILD 233

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 65
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 66  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 185 RFT-SASDVWMFGVCMWEILMHGVKPF 210

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 15  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 71
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 72  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 192 KF-SVASDVWSFGVVLYELFT 211

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 319 PYINVWYDPAE 329

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E +  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 16  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 73
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 74  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 133 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 193 RFT-SASDVWMFGVCMWEILMHGVKPF 218

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 39  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 96
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 97  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 155
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 156 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 216 RFT-SASDVWMFGVCMWEILMHGVKPF 241

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 13  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 70
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 71  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 129
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 130 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 190 RFT-SASDVWMFGVCMWEILMHGVKPF 215

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 14  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 70
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 71  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 191 KF-SVASDVWSFGVVLYELFT 210

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 17  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 75
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 76  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 194 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 313 PYINVWYDPAE 323

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 22  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 80
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 81  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 140
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 198
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 199 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 257
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 258 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 317
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 318 PYINVWYDPAE 328

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 113/227 (49%), Gaps = 18/227 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQN-RETGESVAMKVLAKSTILKHRMVDQIKREISIMK---I 65
           +YE    IGEG + KV  A++ +  G  VA+K +   T  +   +  I RE+++++    
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI-REVAVLRHLET 70
Query: 66  VRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V   SRT    K+ ++ E V        DK+   G   E      FQ L
Sbjct: 71  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-L 129
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   HS  V HRDLKP+N+L+ S G +K++DFGL+ +    + L      T  Y AP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV-TLWYRAP 188
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKKIN 223
           EVL    Y  +  D+WS G I F  M    P   G +D+  L K ++
Sbjct: 189 EVLLQSSY-ATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILD 233

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 75
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H  R+      +Y  Q+   + +  +
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 196 KF-SVASDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 21  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 77
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 78  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 198 KF-SVASDVWSFGVVLYELFT 217

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 20  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 76
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 77  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 197 KF-SVASDVWSFGVVLYELFT 216

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 11  RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 68
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLIDAVA 123
            HP+IV+L  V+ +   V+II+E  T GEL  +   Q R    D      Y  QL  A+A
Sbjct: 69  DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLS 182
           +  SK   HRD+   N+L+ +   +K+ DFGLS   +       +    P  ++APE ++
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 183 NRGYDGSAADVWSCGVILF-VLMAGYLPF 210
            R +  SA+DVW  GV ++ +LM G  PF
Sbjct: 186 FRRFT-SASDVWMFGVCMWEILMHGVKPF 213

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 19  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 75
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 76  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 196 KF-SVASDVWSFGVVLYELFT 215

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 82
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 83  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 201 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 320 PYINVWYDPAE 330

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 14  RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 71
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 72  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 130
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 131 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 191 RFT-SASDVWMFGVCMWEILMHGVKPF 216

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 10  KYEVGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V    +        +VA+K     T    R  ++  +E   M+  
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR--EKFLQEALTMRQF 448
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLIDAVA 123
            HP+IV+L  V+ +   V+II+E  T GEL  +   Q R    D      Y  QL  A+A
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGEL--RSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLS 182
           +  SK   HRD+   N+L+ +   +K+ DFGLS   +       +    P  ++APE ++
Sbjct: 506 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 183 NRGYDGSAADVWSCGVILF-VLMAGYLPF 210
            R +  SA+DVW  GV ++ +LM G  PF
Sbjct: 566 FRRFT-SASDVWMFGVCMWEILMHGVKPF 593

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 319 PYINVWYDPAE 329

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 17  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 75
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 76  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 194 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 252
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 253 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 312
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 313 PYINVWYDPAE 323

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 24  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 82
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 83  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 142
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 200
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 201 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 259
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 260 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 319
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 320 PYINVWYDPAE 330

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 72
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 193 KF-SVASDVWSFGVVLYELFT 212

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 16  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 72
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 73  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 193 KF-SVASDVWSFGVVLYELFT 212

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E++  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGL  + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 16  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 74
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 75  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 134
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 192
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 193 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 312 PYINVWYDPAE 322

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  + + ++G  +A+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 108
Query: 68  HPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V    T       VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 166
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DFGL+   +   + +     T  Y APE++
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIM 223
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTD 256

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 23  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 79
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 80  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 200 KF-SVASDVWSFGVVLYELFT 219

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 47  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 103
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 224 KF-SVASDVWSFGVVLYELFT 243

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 119
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 238 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 357 PYINVWYDPAE 367

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 22  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 78
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 79  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 199 KF-SVASDVWSFGVVLYELFT 218

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 110/239 (46%), Gaps = 50/239 (20%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISI 62
           RR+ K      +GEGT+ +V  A +  T E+VA+K +     L+H    +     RE+S+
Sbjct: 37  RRITK------LGEGTYGEVYKAIDTVTNETVAIKRIR----LEHEEEGVPGTAIREVSL 86
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ------ 116
           +K ++H NI+ L  V+    ++++I E+                 END ++Y        
Sbjct: 87  LKELQHRNIIELKSVIHHNHRLHLIFEYA----------------ENDLKKYMDKNPDVS 130
Query: 117 ---------QLIDAVAHCHSKGVYHRDLKPENLLLDSYGN-----LKVSDFGLSALPQQG 162
                    QLI+ V  CHS+   HRDLKP+NLLL          LK+ DFGL+      
Sbjct: 131 MRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190
Query: 163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
           +        T  Y  PE+L    +  ++ D+WS   I   +LM   L  G++++  L+K
Sbjct: 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK 249

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 20  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 77
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E +  G L D  +  H  +          + +   + +   
Sbjct: 78  NIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 136
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 197 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 247

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 61  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 119
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 179
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 237
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 238 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 296
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356
Query: 262 PWFRKNYNPVK 272
           P+    Y+P +
Sbjct: 357 PYINVWYDPAE 367

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 90
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 91  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 211 KF-SVASDVWSFGVVLYELFT 230

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 18/232 (7%)
Query: 13  VGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   R     +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 106
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHCHS 127
           NI+RL  V+     V I+ E +  G L D  +  H  +          + +   + +   
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD 165
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEVLSNR 184
            G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + +PE ++ R
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCP 230
            +  SA+DVWS G++L+ +M+ G  P+ E     + K ++          CP
Sbjct: 226 KFT-SASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP 276

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ D+GL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 100/201 (49%), Gaps = 14/201 (6%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 34  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 90
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 91  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN--YVAPEVLSNR 184
           K   HRDL   N+L+++   +K+ DFGL+  LPQ          G     + APE L+  
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV+L+ L  
Sbjct: 211 KF-SVASDVWSFGVVLYELFT 230

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 34/226 (15%)
Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           ++  + + +++V R  G+GTF  V+  + + TG SVA+K + +    ++R + QI ++++
Sbjct: 16  ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-QIMQDLA 74
Query: 62  IMKIVRHPNIVRLHE---VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ-- 116
           ++    HPNIV+L      L  R +  I L  V   E     +H+       CR Y++  
Sbjct: 75  VL---HHPNIVQLQSYFYTLGERDRRDIYLNVVM--EYVPDTLHRC------CRNYYRRQ 123
Query: 117 -------------QLIDAVA--HCHSKGVYHRDLKPENLLL-DSYGNLKVSDFGLSALPQ 160
                        QLI ++   H  S  V HRD+KP N+L+ ++ G LK+ DFG +    
Sbjct: 124 VAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS 183
Query: 161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
                +   C    Y APE++    +  +A D+WS G I   +M G
Sbjct: 184 PSEPNVAYICSR-YYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 25  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 83
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 84  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 143
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV-TRYYRAPEVILGM 202
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           GY  +  D+WS G I+  ++ G + F  TD
Sbjct: 203 GYKEN-VDIWSVGCIMGEMIKGGVLFPGTD 231

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 11/211 (5%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMK 64
            ++  + + IG G   +V + + R  G+    VA+K L      + R       E SIM 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR--DFLSEASIMG 105
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVA 123
              HPNI+RL  V+       I+ E++  G L   +  H G+          + +   + 
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEV 180
           +    G  HRDL   N+L+DS    KVSDFGLS + +   +  +TT G      + APE 
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           ++ R +  SA+DVWS GV+++ VL  G  P+
Sbjct: 226 IAFRTFS-SASDVWSFGVVMWEVLAYGERPY 255

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 10  KYEVGRT-------IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K+E+ RT       +G G + +V     ++   +VA+K L + T+     V++  +E ++
Sbjct: 26  KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAV 81
Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR--------- 113
           MK ++HPN+V+L  V       YI+ E++  G L D +         +C R         
Sbjct: 82  MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--------RECNREEVTAVVLL 133
Query: 114 -YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT 172
               Q+  A+ +   K   HRDL   N L+     +KV+DFGLS L        H     
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKF 193
Query: 173 P-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLY 219
           P  + APE L+   +    +DVW+ GV+L+ +   G  P+   DL  +Y
Sbjct: 194 PIKWTAPESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 241

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 145/347 (41%), Gaps = 81/347 (23%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRH 68
           KYE+ + +G+G +  V  + +R TGE VA+K +  +         +  REI I+ ++  H
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGH 68
Query: 69  PNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHC 125
            NIV L  VL +     VY++ +++   E     V +  +LE   ++Y   QLI  + + 
Sbjct: 69  ENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIKYL 125
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-----------ALP---QQGVE------- 164
           HS G+ HRD+KP N+LL++  ++KV+DFGLS            +P    +  E       
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG------------------ 206
           +L     T  Y APE+L          D+WS G IL  ++ G                  
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 207 -------------YLPFGETDLPTLYKKINAAEFSCPFWFSTG----------------A 237
                          PF +T + +L +K+   + +    F+                  A
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDV 284
             L+ K+L  NP  RI      KHP+    +NP      EE N D +
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFVSIFHNP-----NEEPNCDHI 347

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 11  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 68
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 69  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 128
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q   E+ +   GT +Y++PE L    Y   
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDEMANEFVGTRSYMSPERLQGTHYS-V 185
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYK--------KINAAEFSCPFWFSTGATSLI 241
            +D+WS G+ L  +  G  P     +  L          K+ +A FS  F         +
Sbjct: 186 QSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKLPSAVFSLEF------QDFV 239
Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
           +K L  NP  R  ++ +  H + ++       S+ EEV+ 
Sbjct: 240 NKCLIKNPAERADLKQLMVHAFIKR-------SDAEEVDF 272

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ DF L+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK---I 65
           ++YE    IG G +  V  A++  +G  VA+K +      +   +  + RE+++++    
Sbjct: 4   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEA 62
Query: 66  VRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V A SRT    KV ++ E V        DK    G L     +   +Q 
Sbjct: 63  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   H+  + HRDLKPEN+L+ S G +K++DFGL+ +    + L      T  Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-TLWYRAP 180
Query: 179 EVLSNRGYDGSAADVWSCGVIL 200
           EVL    Y  +  D+WS G I 
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCIF 201

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G    V   Q+R +G  +A K++     +K  + +QI RE+ ++     P IV  + 
Sbjct: 24  LGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVLHECNSPYIVGFYG 81
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDL 135
              S  ++ I +E + GG L   +    R+ E    +    ++  +A+   K  + HRD+
Sbjct: 82  AFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 141
Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWS 195
           KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y+APE L    Y    +D+WS
Sbjct: 142 KPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMAPERLQGTHYS-VQSDIWS 198
Query: 196 CGVILFVLMAGYLPFGETD 214
            G+ L  L  G  P    D
Sbjct: 199 MGLSLVELAVGRYPIPPPD 217

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 131/322 (40%), Gaps = 50/322 (15%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDL---------------PTLYKKINA---- 224
            GY  +  D+WS G I+  ++   + F   D                P   KK+      
Sbjct: 200 MGYKEN-VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 258
Query: 225 --------AEFSCPFWF---------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                   A  + P  F               ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 259 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 318
Query: 262 PWFRKNYNPVKCSEEEEVNLDD 283
           P+    Y      +E E  +++
Sbjct: 319 PYINVWYXXXXXXDEREHTIEE 340

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           ++ + IG G F +V   + +  G+    VA+K L      K R       E SIM    H
Sbjct: 17  KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR--DFLSEASIMGQFDH 74
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PNI+ L  V+     V II E++  G L         L +ND R    QL+  +    S 
Sbjct: 75  PNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 129 GVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAP 178
             Y       HRDL   N+L++S    KVSDFG+S + +   E  +TT G      + AP
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCPF 231
           E ++ R +  SA+DVWS G++++ +M+ G  P+ +     + K I           CP 
Sbjct: 189 EAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI 246

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + R IG G F +V   + +  G+    VA+K L      K R       E SIM    HP
Sbjct: 26  IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRR--DFLGEASIMGQFDHP 83
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AV 122
           NI+ L  V+     V I+ E++  G L         L +ND +    QL+         +
Sbjct: 84  NIIHLEGVVTKSKPVMIVTEYMENGSL------DTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPE 179
            +    G  HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + APE
Sbjct: 138 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPE 197
Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGE 212
            ++ R +  SA+DVWS G++++ V+  G  P+ E
Sbjct: 198 AIAFRKFT-SASDVWSYGIVMWEVVSYGERPYWE 230

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 11/211 (5%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMK 64
            ++  + + IG G   +V + + R  G+    VA+K L      + R       E SIM 
Sbjct: 48  ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRR--DFLSEASIMG 105
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVA 123
              HPNI+RL  V+       I+ E++  G L   +  H G+          + +   + 
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEV 180
           +    G  HRDL   N+L+DS    KVSDFGLS + +   +   TT G      + APE 
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           ++ R +  SA+DVWS GV+++ VL  G  P+
Sbjct: 226 IAFRTFS-SASDVWSFGVVMWEVLAYGERPY 255

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 106/225 (47%), Gaps = 23/225 (10%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           ++ + IG G F +V   + +  G+    VA+K L      K R       E SIM    H
Sbjct: 32  KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR--DFLSEASIMGQFDH 89
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PNI+ L  V+     V II E++  G L         L +ND R    QL+  +    S 
Sbjct: 90  PNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 129 GVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAP 178
             Y       HRDL   N+L++S    KVSDFG+S + +   E  +TT G      + AP
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
           E ++ R +  SA+DVWS G++++ +M+ G  P+ +     + K I
Sbjct: 204 EAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 15  RTIGEGTFAKVRF----AQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV        N  TGE VA+K L      +HR     K+EI I++ + H +
Sbjct: 37  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYHEH 94
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           I++       A    + +++E+V  G L D +      L      + QQ+ + +A+ H++
Sbjct: 95  IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ-LLLFAQQICEGMAYLHAQ 153
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL--LHTTCGTP-NYVAPEVLSNRG 185
              HRDL   N+LLD+   +K+ DFGL+    +G E   +     +P  + APE L    
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYK 213
Query: 186 YDGSAADVWSCGVILFVLM 204
           +   A+DVWS GV L+ L+
Sbjct: 214 FY-YASDVWSFGVTLYELL 231

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 15  RTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G+G F  V   +       TGE VA+K L  ST      +   +REI I+K ++H N
Sbjct: 17  QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQHDN 73
Query: 71  IVRLHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   V   A R  + +I+E++  G L D +  H+ R+      +Y  Q+   + +  +
Sbjct: 74  IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-----YVAPEVLS 182
           K   HR+L   N+L+++   +K+ DFGL+ +  Q  E  +     P      + APE L+
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE--YYKVKEPGESPIFWYAPESLT 191
Query: 183 NRGYDGSAADVWSCGVILFVLMA 205
              +   A+DVWS GV+L+ L  
Sbjct: 192 ESKF-SVASDVWSFGVVLYELFT 213

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           ++ + IG G F +V   + +  G+    VA+K L      K R       E SIM    H
Sbjct: 11  KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR--DFLSEASIMGQFDH 68
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PNI+ L  V+     V II E++  G L         L +ND R    QL+  +    S 
Sbjct: 69  PNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 129 GVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAP 178
             Y       HRDL   N+L++S    KVSDFG+S + +   E  +TT G      + AP
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-----EFSCPF 231
           E ++ R +  SA+DVWS G++++ +M+ G  P+ +     + K I           CP 
Sbjct: 183 EAIAYRKFT-SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI 240

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 25/284 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 65
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLP-------TLYKKINAAEFSCPFWFSTGATSL-- 240
            +D+WS G+ L  +  G  P    D          +++ ++      P    +G  SL  
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 242
Query: 241 ---IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
              ++K L  NP  R  ++ +  H + ++       S+ EEV+ 
Sbjct: 243 QDFVNKCLIKNPAERADLKQLMVHAFIKR-------SDAEEVDF 279

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+  FGL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ D GL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK---I 65
           ++YE    IG G +  V  A++  +G  VA+K +      +   +  + RE+++++    
Sbjct: 4   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEA 62
Query: 66  VRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V A SRT    KV ++ E V        DK    G L     +   +Q 
Sbjct: 63  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   H+  + HRDLKPEN+L+ S G +K++DFGL+ +    + L      T  Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-TLWYRAP 180
Query: 179 EVLSNRGYDGSAADVWSCGVIL 200
           EVL    Y  +  D+WS G I 
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCIF 201

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMK-- 64
           ++YE    IG G +  V  A++  +G  VA+K +             I   RE+++++  
Sbjct: 9   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 65  -IVRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQ 116
               HPN+VRL +V A SRT    KV ++ E V        DK    G L     +   +
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMR 127
Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           Q +  +   H+  + HRDLKPEN+L+ S G +K++DFGL+ +    + L      T  Y 
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV-TLWYR 186
Query: 177 APEVLSNRGYDGSAADVWSCGVIL 200
           APEVL    Y  +  D+WS G I 
Sbjct: 187 APEVLLQSTY-ATPVDMWSVGCIF 209

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +TIG+G F  V     R  G  VA+K +      +  +      E S+M  +RH N+V+L
Sbjct: 27  QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 79
Query: 75  HEVLAS-RTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQ-QLIDAVAHCHSKGVY 131
             V+   +  +YI+ E++  G L D +  +GR +L  DC   F   + +A+ +       
Sbjct: 80  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 139
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           HRDL   N+L+      KVSDFGL+   ++      T      + APE L  + +  + +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFS-TKS 195
Query: 192 DVWSCGVILFVLMA-GYLPF 210
           DVWS G++L+ + + G +P+
Sbjct: 196 DVWSFGILLWEIYSFGRVPY 215

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +TIG+G F  V     R  G  VA+K +      +  +      E S+M  +RH N+V+L
Sbjct: 199 QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 251
Query: 75  HEVLAS-RTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQ-QLIDAVAHCHSKGVY 131
             V+   +  +YI+ E++  G L D +  +GR +L  DC   F   + +A+ +       
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 311
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           HRDL   N+L+      KVSDFGL+   ++      T      + APE L  + +  + +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFS-TKS 367
Query: 192 DVWSCGVILFVLMA-GYLPF 210
           DVWS G++L+ + + G +P+
Sbjct: 368 DVWSFGILLWEIYSFGRVPY 387

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ D GL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +TIG+G F  V     R  G  VA+K +      +  +      E S+M  +RH N+V+L
Sbjct: 12  QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 64
Query: 75  HEVLAS-RTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQ-QLIDAVAHCHSKGVY 131
             V+   +  +YI+ E++  G L D +  +GR +L  DC   F   + +A+ +       
Sbjct: 65  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 124
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           HRDL   N+L+      KVSDFGL+   ++      T      + APE L  + +  + +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKFS-TKS 180
Query: 192 DVWSCGVILFVLMA-GYLPF 210
           DVWS G++L+ + + G +P+
Sbjct: 181 DVWSFGILLWEIYSFGRVPY 200

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F +V       + + VA+K L   T+     V     E ++MK ++H  +VRL
Sbjct: 19  KRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRL 73
Query: 75  HEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           + V+     +YII E++  G L D  K    G++L      +  Q+ + +A+   K   H
Sbjct: 74  YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 133
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAA 191
           RDL+  N+L+      K++DFGL+ + +            P  + APE + N G     +
Sbjct: 134 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI-NFGCFTIKS 192
Query: 192 DVWSCGVILF-VLMAGYLPF 210
           DVWS G++L+ ++  G +P+
Sbjct: 193 DVWSFGILLYEIVTYGKIPY 212

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 105/213 (49%), Gaps = 16/213 (7%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVR 67
           +Y+    +G G +  V  A + +TG  VA+K L++   +I+  +   +  RE+ ++K ++
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK---RTYRELRLLKHMK 79
Query: 68  HPNIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           H N++ L +V      L     VY++   +  G   + IV   +L ++  +    Q++  
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           + + HS  + HRDLKP NL ++    LK+ D GL+   +   + +     T  Y APE++
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLA---RHTDDEMTGYVATRWYRAPEIM 194
Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
            N  +     D+WS G I+  L+ G   F  TD
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 227

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 14/202 (6%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK---I 65
           ++YE    IG G +  V  A++  +G  VA+K +      +   +  + RE+++++    
Sbjct: 4   SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTV-REVALLRRLEA 62
Query: 66  VRHPNIVRLHEVLA-SRT----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQL 118
             HPN+VRL +V A SRT    KV ++ E V        DK    G L     +   +Q 
Sbjct: 63  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPAETIKDLMRQF 121
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  +   H+  + HRDLKPEN+L+ S G +K++DFGL+ +    +  L     T  Y AP
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVVTLWYRAP 180
Query: 179 EVLSNRGYDGSAADVWSCGVIL 200
           EVL    Y  +  D+WS G I 
Sbjct: 181 EVLLQSTY-ATPVDMWSVGCIF 201

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F +V       + + VA+K L   T+     V     E ++MK ++H  +VRL
Sbjct: 18  KKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRL 72
Query: 75  HEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           + V+     +YII EF+  G L D  K    G++L      +  Q+ + +A+   K   H
Sbjct: 73  YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIH 132
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAA 191
           RDL+  N+L+      K++DFGL+ + +            P  + APE + N G     +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI-NFGCFTIKS 191
Query: 192 DVWSCGVILF-VLMAGYLPF 210
           +VWS G++L+ ++  G +P+
Sbjct: 192 NVWSFGILLYEIVTYGKIPY 211

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 109/236 (46%), Gaps = 29/236 (12%)
Query: 15  RTIGEGTFAKV-RFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + IG G F +V +      +G+    VA+K L      K R VD +  E  IM    H N
Sbjct: 50  KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR-VDFLG-EAGIMGQFSHHN 107
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVA 123
           I+RL  V++    + II E++  G L DK      L E D      QL+         + 
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGAL-DKF-----LREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP---NYVAPEV 180
           +  +    HRDL   N+L++S    KVSDFGLS + +   E  +TT G      + APE 
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA 221
Query: 181 LSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKIN-----AAEFSCP 230
           +S R +  SA+DVWS G++++ +M  G  P+ E     + K IN          CP
Sbjct: 222 ISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP 276

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMEPEVVTRYYRAPEVILGM 200
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
           GY  +  D+WS G I+  ++   + F   D    + K+
Sbjct: 201 GYKEN-VDIWSVGCIMGEMVCHKILFPGRDYIDQWNKV 237

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 120/258 (46%), Gaps = 20/258 (7%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-HRMVDQIKREISIMKIVR 67
           A+  +   IG G F KV  A     G+ VA+K           + ++ +++E  +  +++
Sbjct: 7   AELTLEEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           HPNI+ L  V      + +++EF  GG L ++++   R+  +    +  Q+   + + H 
Sbjct: 65  HPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 128 KGVY---HRDLKPENLLL--------DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           + +    HRDLK  N+L+         S   LK++DFGL+    +  ++  +  G   ++
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAAGAYAWM 181
Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYK-KINAAEFSCPFWFS 234
           APEV+    +    +DVWS GV+L+ L+ G +PF G   L   Y   +N      P    
Sbjct: 182 APEVIRASMFS-KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCP 240
Query: 235 TGATSLIHKILDPNPKTR 252
                L+    +P+P +R
Sbjct: 241 EPFAKLMEDCWNPDPHSR 258

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           EV   +G G F  V  A+ R   + VA+K +   +  K  +V     E+  +  V HPNI
Sbjct: 11  EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIV-----ELRQLSRVNHPNI 63
Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE----NDCRRYFQQLIDAVAHCHS 127
           V+L+   A    V +++E+  GG L++ ++H    L          +  Q    VA+ HS
Sbjct: 64  VKLYG--ACLNPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 128 ---KGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
              K + HRDLKP NLLL + G  LK+ DFG +   Q     +    G+  ++APEV   
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEG 177
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
             Y     DV+S G+IL+ ++    PF E   P  
Sbjct: 178 SNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAF 211

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/215 (31%), Positives = 102/215 (47%), Gaps = 22/215 (10%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           EV   +G G F  V  A+ R   + VA+K +   +  K  +V     E+  +  V HPNI
Sbjct: 12  EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERKAFIV-----ELRQLSRVNHPNI 64
Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE----NDCRRYFQQLIDAVAHCHS 127
           V+L+   A    V +++E+  GG L++ ++H    L          +  Q    VA+ HS
Sbjct: 65  VKLYG--ACLNPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 128 ---KGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
              K + HRDLKP NLLL + G  LK+ DFG +   Q     +    G+  ++APEV   
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEG 178
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
             Y     DV+S G+IL+ ++    PF E   P  
Sbjct: 179 SNYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAF 212

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +TIG+G F  V     R  G  VA+K +      +  +      E S+M  +RH N+V+L
Sbjct: 18  QTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLA-----EASVMTQLRHSNLVQL 70
Query: 75  HEVLAS-RTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQ-QLIDAVAHCHSKGVY 131
             V+   +  +YI+ E++  G L D +  +GR +L  DC   F   + +A+ +       
Sbjct: 71  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFV 130
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           HRDL   N+L+      KVSDFGL+   ++      T      + APE L    +  + +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREAAFS-TKS 186
Query: 192 DVWSCGVILFVLMA-GYLPF 210
           DVWS G++L+ + + G +P+
Sbjct: 187 DVWSFGILLWEIYSFGRVPY 206

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 23  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 82  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 141
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+   
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-MMEPEVVTRYYRAPEVILGM 200
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
           GY  +  D+WS G I+  ++   + F   D    + K+
Sbjct: 201 GYKEN-VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 237

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 17  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 75
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 76  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 135
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 193
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
            GY  +  D+WS G I+  ++   + F   D    + K+
Sbjct: 194 MGYKEN-VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 231

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 30  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 88  DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 146 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMS 204
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 8/219 (3%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           + +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V 
Sbjct: 28  LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVN 86
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLIDAVAH 124
           H NI+ L  V   +  +    +     EL D  + Q   +E D  R      Q++  + H
Sbjct: 87  HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKH 146
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSN 183
            HS G+ HRDLKP N+++ S   LK+ DFGL+     G   + T    T  Y APEV+  
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILG 204
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
            GY  +  D+WS G I+  ++   + F   D    + K+
Sbjct: 205 MGYKEN-VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 242

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 15  RTIGEGTFAKVRF----AQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV        N  TGE VA+K L      +HR     K+EI I++ + H +
Sbjct: 20  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEIDILRTLYHEH 77
Query: 71  IVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           I++       + +  + +++E+V  G L D +      L      + QQ+ + +A+ HS+
Sbjct: 78  IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ-LLLFAQQICEGMAYLHSQ 136
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL--LHTTCGTP-NYVAPEVLSNRG 185
              HR+L   N+LLD+   +K+ DFGL+    +G E   +     +P  + APE L    
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 186 YDGSAADVWSCGVILFVLMA 205
           +   A+DVWS GV L+ L+ 
Sbjct: 197 F-YYASDVWSFGVTLYELLT 215

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 19/207 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G G +  V  A ++ +GE VA+K L++   S I   R      RE+ ++K ++H N++ 
Sbjct: 32  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY----RELLLLKHMQHENVIG 87
Query: 74  LHEVLASRTKV------YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           L +V    + +      Y+++ F+       KI+   +  E   +    Q++  + + HS
Sbjct: 88  LLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGL-KFSEEKIQYLVYQMLKGLKYIHS 144
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            GV HRDLKP NL ++    LK+ DFGL+   +     +     T  Y APEV+ +  + 
Sbjct: 145 AGVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWYRAPEVILSWMHY 201
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETD 214
               D+WS G I+  ++ G   F   D
Sbjct: 202 NQTVDIWSVGCIMAEMLTGKTLFKGKD 228

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 77.8 bits (190), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 70  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 127
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 187
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 244
Query: 190 AADVWSCGVILFVLMAGYLPFGETD 214
            +D+WS G+ L  +  G  P    D
Sbjct: 245 QSDIWSMGLSLVEMAVGRYPIPPPD 269

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 92
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 93  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 209
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTL 218
            +D+WS G+ L  +  G  P    D   L
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAKEL 238

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIVRHPNIVR 73
           +G G +  V  A ++ +GE VA+K L++   S I   R      RE+ ++K ++H N++ 
Sbjct: 50  VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY----RELLLLKHMQHENVIG 105
Query: 74  LHEVLASRTKV------YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           L +V    + +      Y+++ F+       KI+      E   +    Q++  + + HS
Sbjct: 106 LLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLKYIHS 162
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
            GV HRDLKP NL ++    LK+ DFGL+   +     +     T  Y APEV+ +  + 
Sbjct: 163 AGVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWYRAPEVILSWMHY 219
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETD 214
               D+WS G I+  ++ G   F   D
Sbjct: 220 NQTVDIWSVGCIMAEMLTGKTLFKGKD 246

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 30  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 87
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 88  DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 146 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 303

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YEV + IG+G+F +V  A + +  + VA+K++        R   Q   EI I++ +R  
Sbjct: 98  RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQ 153
Query: 70  ------NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDA 121
                 N++ + E    R  + +  E ++    EL  K   QG  L    R++   ++  
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL-VRKFAHSILQC 212
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYG--NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           +   H   + H DLKPEN+LL   G   +KV DFG S    Q V   +T   +  Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV---YTXIQSRFYRAPE 269
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGY 207
           V+    Y G   D+WS G IL  L+ GY
Sbjct: 270 VILGARY-GMPIDMWSLGCILAELLTGY 296

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 65
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 190 AADVWSCGVILFVLMAGYLPFGETD 214
            +D+WS G+ L  +  G  P    D
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPD 207

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YEV + IG+G+F +V  A + +  + VA+K++        R   Q   EI I++ +R  
Sbjct: 98  RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQ 153
Query: 70  ------NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDA 121
                 N++ + E    R  + +  E ++    EL  K   QG  L    R++   ++  
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL-VRKFAHSILQC 212
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYG--NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           +   H   + H DLKPEN+LL   G   +KV DFG S    Q V   +T   +  Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV---YTXIQSRFYRAPE 269
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGY 207
           V+    Y G   D+WS G IL  L+ GY
Sbjct: 270 VILGARY-GMPIDMWSLGCILAELLTGY 296

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 65
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTL 218
            +D+WS G+ L  +  G  P    D   L
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 6/209 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 65
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTL 218
            +D+WS G+ L  +  G  P    D   L
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEL 211

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 6/205 (2%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P 
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSPY 65
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 66  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 190 AADVWSCGVILFVLMAGYLPFGETD 214
            +D+WS G+ L  +  G  P    D
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPD 207

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 58  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 116 DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 174 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 14  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 71
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 72  DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 130 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 188
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 189 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 248
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 249 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 287

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 10  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 67
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 68  DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 126 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 184
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 185 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 244
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 245 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 283

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 11  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 68
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 69  DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 127 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 246 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 284

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 107/223 (47%), Gaps = 21/223 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL-- 74
           +G+G  A V   ++++TG+  A+KV    + L  R VD   RE  ++K + H NIV+L  
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 75  -HEVLASRTKVYIILEFVTGGELFDKIVHQGR---LLENDCRRYFQQLIDAVAHCHSKGV 130
             E   +R KV +I+EF   G L+  +        L E++     + ++  + H    G+
Sbjct: 75  IEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 131 YHRDLKPENLLL----DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL----- 181
            HR++KP N++     D     K++DFG +A   +  E   +  GT  Y+ P++      
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFG-AARELEDDEQFVSLYGTEEYLHPDMYERAVL 192
Query: 182 --SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
              ++   G+  D+WS GV  +    G LPF   + P   K++
Sbjct: 193 RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 13/200 (6%)
Query: 15  RTIGEGTFAKVRF----AQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV        N  TGE VA+K L      +HR     K+EI I++ + H +
Sbjct: 20  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR--SGWKQEIDILRTLYHEH 77
Query: 71  IVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           I++       + +  + +++E+V  G L D +      L      + QQ+ + +A+ H++
Sbjct: 78  IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ-LLLFAQQICEGMAYLHAQ 136
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL--LHTTCGTP-NYVAPEVLSNRG 185
              HR+L   N+LLD+   +K+ DFGL+    +G E   +     +P  + APE L    
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 186 YDGSAADVWSCGVILFVLMA 205
           +   A+DVWS GV L+ L+ 
Sbjct: 197 F-YYASDVWSFGVTLYELLT 215

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 58  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHS 115
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 116 DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  GT NY+ PE    +S
Sbjct: 174 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 232
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 21/239 (8%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M  Q+     + +   +G+G  A V   ++++TG+  A+KV    + L  R VD   RE 
Sbjct: 1   MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREF 58
Query: 61  SIMKIVRHPNIVRL---HEVLASRTKVYIILEFVTGGELFDKIVHQGR---LLENDCRRY 114
            ++K + H NIV+L    E   +R KV +I+EF   G L+  +        L E++    
Sbjct: 59  EVLKKLNHKNIVKLFAIEEETTTRHKV-LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIV 117
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSALPQQGVELLHTTC 170
            + ++  + H    G+ HR++KP N++     D     K++DFG +A   +  E      
Sbjct: 118 LRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFG-AARELEDDEQFVXLY 176
Query: 171 GTPNYVAPEVL-------SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
           GT  Y+ P++         ++   G+  D+WS GV  +    G LPF   + P   K++
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 108/209 (51%), Gaps = 22/209 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 16  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVAHC 125
            L    +++ ++ I+ ++  G  L+        L  ++ +   ++LID        + + 
Sbjct: 72  -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARGMDYL 124
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEVLSN 183
           H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV+  
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 184 RGYDGSA--ADVWSCGVILFVLMAGYLPF 210
           +  +  +  +DV++ G++L+ LM G LP+
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPY 213

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 51/256 (19%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY +G+T+G G+F  V    + E+G+  A+K + +    K+R       E+ IMK++ H 
Sbjct: 8   KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR-------ELDIMKVLDHV 60
Query: 70  NIVRL--------------------HEVLASRTK------------------VYIILEFV 91
           NI++L                    H  L  +                    + +I+E+V
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 92  --TGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN- 147
             T  ++    +  GR +  N    Y  QL  AV   HS G+ HRD+KP+NLL++S  N 
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 148 LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY 207
           LK+ DFG +         +   C    Y APE++        + D+WS G +   L+ G 
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAXICSR-FYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 208 LPF-GETDLPTLYKKI 222
             F GET +  L + I
Sbjct: 240 PLFSGETSIDQLVRII 255

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 35/222 (15%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMK--VLAKSTILKHRMVDQIKREISIMKIV 66
           ++Y   + +G G    V  A + +  + VA+K  VL     +KH +     REI I++ +
Sbjct: 11  SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL-----REIKIIRRL 65
Query: 67  RHPNIVRLHEVLASR--------------TKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
            H NIV++ E+L                   VYI+ E++        ++ QG LLE   R
Sbjct: 66  DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHAR 123
Query: 113 RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSAL-----PQQGVELL 166
            +  QL+  + + HS  V HRDLKP NL +++    LK+ DFGL+ +       +G    
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG---- 179
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
           H + G  T  Y +P +L +      A D+W+ G I   ++ G
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 97/200 (48%), Gaps = 15/200 (7%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G+F +V   ++++TG   A+K        K R+      E+     +  P IV L+ 
Sbjct: 82  LGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLYG 133
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
            +     V I +E + GG L   +  QG L E+    Y  Q ++ + + HS+ + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 137 PENLLLDSYGN-LKVSDFGLSALPQQ---GVELLHT--TCGTPNYVAPEVLSNRGYDGSA 190
            +N+LL S G+   + DFG +   Q    G +LL      GT  ++APEV+  R  D + 
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCD-AK 252
Query: 191 ADVWSCGVILFVLMAGYLPF 210
            DVWS   ++  ++ G  P+
Sbjct: 253 VDVWSSCCMMLHMLNGCHPW 272

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 122/275 (44%), Gaps = 25/275 (9%)
Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R  K+++   IG G+F  V    + ET   VA   L    + K     + K E   +K +
Sbjct: 26  RFLKFDI--EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSER-QRFKEEAEXLKGL 82
Query: 67  RHPNIVRLHEVLASRTK----VYIILEFVTGGELFDKI----VHQGRLLENDCRRYFQQL 118
           +HPNIVR ++   S  K    + ++ E  T G L   +    V + ++L + CR+  + L
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
                H  +  + HRDLK +N+ +    G++K+ D GL+ L +          GTP + A
Sbjct: 143 --QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFXA 198
Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET-DLPTLYKKINAAEFSCPFWFSTG 236
           PE    + YD S  DV++ G           P+ E  +   +Y+++ +     P  F   
Sbjct: 199 PEXYEEK-YDES-VDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSG--VKPASFDKV 254
Query: 237 ATSLIHKILD----PNPKTRIRIEGIRKHPWFRKN 267
           A   + +I++     N   R  I+ +  H +F++ 
Sbjct: 255 AIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
           Y + + IG G  +KV F    E  +  A+K +       ++ +D  + EI+ + K+ +H 
Sbjct: 58  YSILKQIGSGGSSKV-FQVLNEKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHS 115
Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR-YFQQLIDAVAHCHS 127
           + I+RL++   +   +Y+++E   G    +  + + + ++   R+ Y++ +++AV   H 
Sbjct: 116 DKIIRLYDYEITDQYIYMVME--CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEV---LS 182
            G+ H DLKP N L+   G LK+ DFG++    P     +  +  G  NY+ PE    +S
Sbjct: 174 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232
Query: 183 NRGYDG-------SAADVWSCGVILFVLMAGYLPFGE--TDLPTLYKKINAA-EFSCPFW 232
           +   +G         +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292
Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
                  ++   L  +PK RI I  +  HP+ +   +PV
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV 331

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 28  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVAHC 125
            L    +++ ++ I+ ++  G  L+        L  ++ +   ++LID        + + 
Sbjct: 84  -LFMGYSTKPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEVLSN 183
           H+K + HRDLK  N+ L     +K+ DFGL+    +  G        G+  ++APEV+  
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 184 RGYDGSA--ADVWSCGVILFVLMAGYLPF 210
           +  +  +  +DV++ G++L+ LM G LP+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YEV + IG+G F +V  A + +  + VA+K++        R   Q   EI I++ +R  
Sbjct: 98  RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQ 153
Query: 70  ------NIVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDA 121
                 N++ + E    R  + +  E ++    EL  K   QG  L    R++   ++  
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPL-VRKFAHSILQC 212
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYG--NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           +   H   + H DLKPEN+LL   G   +KV DFG S    Q V   +    +  Y APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV---YXXIQSRFYRAPE 269
Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGY 207
           V+    Y G   D+WS G IL  L+ GY
Sbjct: 270 VILGARY-GMPIDMWSLGCILAELLTGY 296

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G +  V   ++  +G+ +A+K +  +   + +    +  +IS M+ V  P  V  + 
Sbjct: 15  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS-MRTVDCPFTVTFYG 73
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDC-RRYFQQLIDAVAHCHSK-GVYH 132
            L     V+I +E +     + + +++ +G+ +  D   +    ++ A+ H HSK  V H
Sbjct: 74  ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE----VLSNRGYDG 188
           RD+KP N+L+++ G +K+ DFG+S      V       G   Y+APE     L+ +GY  
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDAGCKPYMAPERINPELNQKGY-S 191
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLP--TLYKKINAAEFSCPF-WFSTGATSLIHKIL 245
             +D+WS G+ +  L     P+     P   L + +       P   FS        + L
Sbjct: 192 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 251
Query: 246 DPNPKTRIRIEGIRKHPWF 264
             N K R     + +HP+F
Sbjct: 252 KKNSKERPTYPELMQHPFF 270

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G+F +V   ++++TG   A+K        K R+      E+     +  P IV L+ 
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK--------KVRLEVFRAEELMACAGLTSPRIVPLYG 152
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
            +     V I +E + GG L   +  QG L E+    Y  Q ++ + + HS+ + H D+K
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 137 PENLLLDSYGN-LKVSDFGLSALPQQ---GVELLHT--TCGTPNYVAPEVLSNRGYDGSA 190
            +N+LL S G+   + DFG +   Q    G  LL      GT  ++APEV+  R  D + 
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCD-AK 271
Query: 191 ADVWSCGVILFVLMAGYLPF 210
            DVWS   ++  ++ G  P+
Sbjct: 272 VDVWSSCCMMLHMLNGCHPW 291

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 14  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 70  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 121
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 122 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 215

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 24/210 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 39  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 95  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 146
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 147 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           + ++      +DV++ G++L+ LM G LP+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 17  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 73  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 124
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 28/220 (12%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMK 64
           V+  ++   IG G F +V   + +  G+    VA+K L      + R   +   E SIM 
Sbjct: 13  VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR--EFLSEASIMG 70
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
              HPNI+RL  V+ +   V I+ EF+  G L         L  ND +    QL+  +  
Sbjct: 71  QFEHPNIIRLEGVVTNSMPVMILTEFMENGAL------DSFLRLNDGQFTVIQLVGMLRG 124
Query: 125 CHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTC---GTP 173
             S   Y       HRDL   N+L++S    KVSDFGLS  L +   +  +T+      P
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 174 -NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
             + APE ++ R +  SA+D WS G++++ +M+    FGE
Sbjct: 185 IRWTAPEAIAFRKFT-SASDAWSYGIVMWEVMS----FGE 219

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 17  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 73  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 124
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 218

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 14/259 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G +  V   ++  +G+ +A+K +  +   + +    +  +IS M+ V  P  V  + 
Sbjct: 59  LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS-MRTVDCPFTVTFYG 117
Query: 77  VLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDC-RRYFQQLIDAVAHCHSK-GVYH 132
            L     V+I +E +     + + +++ +G+ +  D   +    ++ A+ H HSK  V H
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 177
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE----VLSNRGYDG 188
           RD+KP N+L+++ G +K+ DFG+S      V       G   Y+APE     L+ +GY  
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT-IDAGCKPYMAPERINPELNQKGY-S 235
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLP--TLYKKINAAEFSCPF-WFSTGATSLIHKIL 245
             +D+WS G+ +  L     P+     P   L + +       P   FS        + L
Sbjct: 236 VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 295
Query: 246 DPNPKTRIRIEGIRKHPWF 264
             N K R     + +HP+F
Sbjct: 296 KKNSKERPTYPELMQHPFF 314

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 24/210 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 40  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 96  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 147
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           + ++      +DV++ G++L+ LM G LP+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 12  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 68  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 103/238 (43%), Gaps = 42/238 (17%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           ++ + IG G F +V     +  G+    VA+K L      K R       E SIM    H
Sbjct: 36  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEASIMGQFDH 93
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PN++ L  V+   T V II EF+  G L D  + Q     ND +    QL+  +    + 
Sbjct: 94  PNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQ-----NDGQFTVIQLVGMLRGIAAG 147
Query: 129 GVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY------ 175
             Y       HRDL   N+L++S    KVSDFGLS         L      P Y      
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS-------RFLEDDTSDPTYTSALGG 200
Query: 176 ------VAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE 226
                  APE +  R +  SA+DVWS G++++ +M+ G  P+ +    T    INA E
Sbjct: 201 KIPIRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDM---TNQDVINAIE 254

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 21/204 (10%)
Query: 15  RTIGEGTFAKVRF----AQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV        N  TGE VA+K L +    + R     +REI I++ + H +
Sbjct: 15  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR--SGWQREIEILRTLYHEH 72
Query: 71  IVRLHEVLASRTK--VYIILEFVTGGELFDKI----VHQGRLLENDCRRYFQQLIDAVAH 124
           IV+       + +  V +++E+V  G L D +    V   +LL      + QQ+ + +A+
Sbjct: 73  IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL-----LFAQQICEGMAY 127
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL--LHTTCGTP-NYVAPEVL 181
            H++   HR L   N+LLD+   +K+ DFGL+    +G E   +     +P  + APE L
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 182 SNRGYDGSAADVWSCGVILFVLMA 205
               +   A+DVWS GV L+ L+ 
Sbjct: 188 KECKFY-YASDVWSFGVTLYELLT 210

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 103/220 (46%), Gaps = 28/220 (12%)
Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMK 64
           V+  ++   IG G F +V   + +  G+    VA+K L      + R   +   E SIM 
Sbjct: 15  VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR--EFLSEASIMG 72
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
              HPNI+RL  V+ +   V I+ EF+  G L D  +   RL  ND +    QL+  +  
Sbjct: 73  QFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFL---RL--NDGQFTVIQLVGMLRG 126
Query: 125 CHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN--- 174
             S   Y       HRDL   N+L++S    KVSDFGLS   ++       T        
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 175 --YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
             + APE ++ R +  SA+D WS G++++ +M+    FGE
Sbjct: 187 IRWTAPEAIAFRKFT-SASDAWSYGIVMWEVMS----FGE 221

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 120/261 (45%), Gaps = 15/261 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G GT  +V   + R+TG  +A+K + +S   +      +  ++ ++K    P IV+   
Sbjct: 33  MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV-VLKSHDCPYIVQCFG 91
Query: 77  VLASRTKVYIILEFV-TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRD 134
              + T V+I +E + T  E   K + QG + E    +    ++ A+ +   K GV HRD
Sbjct: 92  TFITNTDVFIAMELMGTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRD 150
Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-----SNRGYDGS 189
           +KP N+LLD  G +K+ DFG+S       +    + G   Y+APE +     +   YD  
Sbjct: 151 VKPSNILLDERGQIKLCDFGISGRLVDD-KAKDRSAGCAAYMAPERIDPPDPTKPDYD-I 208
Query: 190 AADVWSCGVILFVLMAGYLPFG--ETDLPTLYKKINAAEFSCP--FWFSTGATSLIHKIL 245
            ADVWS G+ L  L  G  P+   +TD   L K +       P    FS    S +   L
Sbjct: 209 RADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCL 268
Query: 246 DPNPKTRIRIEGIRKHPWFRK 266
             + + R +   + +H + ++
Sbjct: 269 TKDHRKRPKYNKLLEHSFIKR 289

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 21/204 (10%)
Query: 15  RTIGEGTFAKVRF----AQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV        N  TGE VA+K L +    + R     +REI I++ + H +
Sbjct: 14  RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLR--SGWQREIEILRTLYHEH 71
Query: 71  IVRLHEVLASRTK--VYIILEFVTGGELFDKI----VHQGRLLENDCRRYFQQLIDAVAH 124
           IV+       + +  V +++E+V  G L D +    V   +LL      + QQ+ + +A+
Sbjct: 72  IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL-----LFAQQICEGMAY 126
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL--LHTTCGTP-NYVAPEVL 181
            H++   HR L   N+LLD+   +K+ DFGL+    +G E   +     +P  + APE L
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 182 SNRGYDGSAADVWSCGVILFVLMA 205
               +   A+DVWS GV L+ L+ 
Sbjct: 187 KECKFY-YASDVWSFGVTLYELLT 209

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G +  V    ++ +G+ +A+K + +ST+ +      +     +M+    P IV+ + 
Sbjct: 30  IGRGAYGSVNKMVHKPSGQIMAVKRI-RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 77  VLASRTKVYIILEFVTGGELFDKI------VHQGRLLENDCRRYFQQLIDAVAHCHSK-G 129
            L      +I +E ++    FDK       V    + E    +     + A+ H      
Sbjct: 89  ALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK 146
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPEVL----SN 183
           + HRD+KP N+LLD  GN+K+ DFG+S    Q V+ +  T   G   Y+APE +    S 
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGISG---QLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF 210
           +GYD   +DVWS G+ L+ L  G  P+
Sbjct: 204 QGYD-VRSDVWSLGITLYELATGRFPY 229

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V+  + +   + VA+K++ + ++ +    D+  +E   M  + HP +V+ 
Sbjct: 14  KELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSE----DEFFQEAQTMMKLSHPKLVKF 68
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V +    +YI+ E+++ G L + +   G+ LE +        + + +A   S    HR
Sbjct: 69  YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHR 128
Query: 134 DLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDG 188
           DL   N L+D    +KVSDFG++   L  Q V    ++ GT     + APEV     Y  
Sbjct: 129 DLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV----SSVGTKFPVKWSAPEVFHYFKY-S 183
Query: 189 SAADVWSCGVILF-VLMAGYLPF 210
           S +DVW+ G++++ V   G +P+
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPY 206

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 28  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVAHC 125
            L    ++  ++ I+ ++  G  L+        L  ++ +   ++LID        + + 
Sbjct: 84  -LFMGYSTAPQLAIVTQWCEGSSLYH------HLHASETKFEMKKLIDIARQTARGMDYL 136
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEVLSN 183
           H+K + HRDLK  N+ L     +K+ DFGL+    +  G        G+  ++APEV+  
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 184 RGYDGSA--ADVWSCGVILFVLMAGYLPF 210
           +  +  +  +DV++ G++L+ LM G LP+
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 107/220 (48%), Gaps = 27/220 (12%)
Query: 15  RTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           + +G G F +V  A  N+ T   VA+K +   ++     V+    E ++MK ++H  +V+
Sbjct: 21  KKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVK 74
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND--CRRYFQQLID-------AVAH 124
           LH V+ ++  +YII EF+  G L D        L++D   ++   +LID        +A 
Sbjct: 75  LHAVV-TKEPIYIITEFMAKGSLLD-------FLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSN 183
              +   HRDL+  N+L+ +    K++DFGL+ + +            P  + APE + N
Sbjct: 127 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI-N 185
Query: 184 RGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
            G     +DVWS G++L  ++  G +P+     P + + +
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 225

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 12  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 68  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+    +  G        G+  ++APEV  
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 12  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    ++  ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 68  -LFMGYSTAPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 119
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+ +  +  G        G+  ++APEV  
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 24/214 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 32  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 88  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 139
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+    +  G        G+  ++APEV  
Sbjct: 140 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
           + ++      +DV++ G++L+ LM G LP+   +
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 233

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 123/279 (44%), Gaps = 41/279 (14%)
Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMV--DQIKREISIM 63
           R +  +E  + +G G F  V  A+N+    + A+K +     L +R +  +++ RE+  +
Sbjct: 2   RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR----LPNRELAREKVMREVKAL 57
Query: 64  KIVRHPNIVRL----------HEVLASRTKVY--IILEFVTGGELFDKIVHQGRLLEND- 110
             + HP IVR            ++  S  KVY  I ++      L D +  +  + E + 
Sbjct: 58  AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 111 --CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGVELL- 166
             C   F Q+ +AV   HSKG+ HRDLKP N+       +KV DFGL +A+ Q   E   
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 167 ---------HT-TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP 216
                    HT   GT  Y++PE +    Y     D++S G+ILF L+    PF  T + 
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSY-SHKVDIFSLGLILFELL---YPFS-TQME 232
Query: 217 TLYKKINAAEFSCPFWFSTGATS---LIHKILDPNPKTR 252
            +    +      P  F+        ++  +L P+P  R
Sbjct: 233 RVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMER 271

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---IKREISIMKIVRHPNIVR 73
           +G+G F  V   +    G++    V  K   L+H   DQ    +REI I+K +    IV+
Sbjct: 15  LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 74  LHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
              V     R ++ +++E++  G L D +  H+ RL  +    Y  Q+   + +  S+  
Sbjct: 73  YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 132
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LP-QQGVELLHTTCGTP-NYVAPEVLSNRGYD 187
            HRDL   N+L++S  ++K++DFGL+  LP  +   ++     +P  + APE LS+  + 
Sbjct: 133 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF- 191
Query: 188 GSAADVWSCGVILFVLM 204
              +DVWS GV+L+ L 
Sbjct: 192 SRQSDVWSFGVVLYELF 208

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +   +++ K    +M  + H  +V+L
Sbjct: 30  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 84
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 85  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS       E        P  +  PEVL    +  S +D
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF-SSKSD 203
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 204 IWAFGVLMWEIYSLGKMPY 222

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 24/210 (11%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           VG+ IG G+F  V   + +  G+ VA+K+L   T    + +   K E+ +++  RH NI+
Sbjct: 40  VGQRIGSGSFGTV--YKGKWHGD-VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN--------DCRRYFQQLIDAVAH 124
            L    +++ ++ I+ ++  G  L+    H   ++E         D  R   Q +D   +
Sbjct: 96  -LFMGYSTKPQLAIVTQWCEGSSLY----HHLHIIETKFEMIKLIDIARQTAQGMD---Y 147
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEV-- 180
            H+K + HRDLK  N+ L     +K+ DFGL+    +  G        G+  ++APEV  
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           + ++      +DV++ G++L+ LM G LP+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 27/208 (12%)
Query: 15  RTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           + +G G F +V  A  N+ T   VA+K +   ++     V+    E ++MK ++H  +V+
Sbjct: 194 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVK 247
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND--CRRYFQQLID-------AVAH 124
           LH V+ ++  +YII EF+  G L D        L++D   ++   +LID        +A 
Sbjct: 248 LHAVV-TKEPIYIITEFMAKGSLLD-------FLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSN 183
              +   HRDL+  N+L+ +    K++DFGL+ + +            P  + APE + N
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI-N 358
Query: 184 RGYDGSAADVWSCGVILF-VLMAGYLPF 210
            G     +DVWS G++L  ++  G +P+
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPY 386

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 15  RTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV       +   TGE VA+K L   +   H  +  +K+EI I++ + H N
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHEN 84
Query: 71  IVRLHEVLASR--TKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   +        + +I+EF+  G L + +  ++ ++      +Y  Q+   + +  S
Sbjct: 85  IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN---YVAPEVLSNR 184
           +   HRDL   N+L++S   +K+ DFGL+   +   E         +   + APE L   
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV L  L+ 
Sbjct: 205 KF-YIASDVWSFGVTLHELLT 224

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 70/341 (20%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---------QIKRE 59
           + Y V R I  G++  V    + E G  VA+K +  +T+   R V+         ++ RE
Sbjct: 22  SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVF-NTVSDGRTVNILSDSFLCKRVLRE 79
Query: 60  ISIMKIVRHPNIVRLHEVLA-----SRTKVYIILEFVTGGELFDKIVHQGRLLENDCR-R 113
           I ++    HPNI+ L ++       +  K+Y++ E +       +++H  R++ +    +
Sbjct: 80  IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHIQ 137
Query: 114 YFQQLIDAVAHC-HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT 172
           YF   I    H  H  GV HRDL P N+LL    ++ + DF L+          H     
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 173 PNYVAPE-VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN-------- 223
             Y APE V+  +G+     D+WS G ++  +      F  +   T Y ++N        
Sbjct: 198 -WYRAPELVMQFKGF-TKLVDMWSAGCVMAEMFNRKALFRGS---TFYNQLNKIVEVVGT 252
Query: 224 -----AAEFSCP----------------FWFSTGATS------LIHKILDPNPKTRIRIE 256
                   FS P                 W +   T+      LI K+L+ NP+ RI  E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 257 GIRKHPWFRKNYNPVKCSE---------EEEVNLDDVHAVF 288
              +HP+F   ++P+  +E         E   ++ D+H +F
Sbjct: 313 QALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIF 353

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 141/341 (41%), Gaps = 70/341 (20%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---------QIKRE 59
           + Y V R I  G++  V    + E G  VA+K +  +T+   R V+         ++ RE
Sbjct: 22  SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVF-NTVSDGRTVNILSDSFLCKRVLRE 79
Query: 60  ISIMKIVRHPNIVRLHEVLA-----SRTKVYIILEFVTGGELFDKIVHQGRLLENDCR-R 113
           I ++    HPNI+ L ++       +  K+Y++ E +       +++H  R++ +    +
Sbjct: 80  IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHIQ 137
Query: 114 YFQQLIDAVAHC-HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT 172
           YF   I    H  H  GV HRDL P N+LL    ++ + DF L+          H     
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
Query: 173 PNYVAPE-VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN-------- 223
             Y APE V+  +G+     D+WS G ++  +      F  +   T Y ++N        
Sbjct: 198 -WYRAPELVMQFKGF-TKLVDMWSAGCVMAEMFNRKALFRGS---TFYNQLNKIVEVVGT 252
Query: 224 -----AAEFSCP----------------FWFSTGATS------LIHKILDPNPKTRIRIE 256
                   FS P                 W +   T+      LI K+L+ NP+ RI  E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 257 GIRKHPWFRKNYNPVKCSE---------EEEVNLDDVHAVF 288
              +HP+F   ++P+  +E         E   ++ D+H +F
Sbjct: 313 QALRHPYFESLFDPLDLTEGLSERFHFDESVTDVYDMHKIF 353

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 15  RTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           R +GEG F KV       +   TGE VA+K L   +   H  +  +K+EI I++ + H N
Sbjct: 15  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNH--IADLKKEIEILRNLYHEN 72
Query: 71  IVRLHEVLASR--TKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+   +        + +I+EF+  G L + +  ++ ++      +Y  Q+   + +  S
Sbjct: 73  IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN---YVAPEVLSNR 184
           +   HRDL   N+L++S   +K+ DFGL+   +   E         +   + APE L   
Sbjct: 133 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 185 GYDGSAADVWSCGVILFVLMA 205
            +   A+DVWS GV L  L+ 
Sbjct: 193 KF-YIASDVWSFGVTLHELLT 212

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 27/228 (11%)
Query: 58  REISIMKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRL--LENDCRRY 114
           RE+ +++    HPN++R       R   YI +E         + V Q     L  +    
Sbjct: 66  REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA--TLQEYVEQKDFAHLGLEPITL 123
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLK--VSDFGLS---ALPQQGVELL 166
            QQ    +AH HS  + HRDLKP N+L+   +++G +K  +SDFGL    A+ +      
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 167 HTTCGTPNYVAPEVLSNRGYDGS--AADVWSCGVIL-FVLMAGYLPFGETDLPTLYKKIN 223
               GT  ++APE+LS    +      D++S G +  +V+  G  PFG+    +L ++ N
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK----SLQRQAN 239
Query: 224 AAEFSCPF-------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
               +C              A  LI K++  +P+ R   + + KHP+F
Sbjct: 240 ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---IKREISIMKIVRHPNIVR 73
           +G+G F  V   +    G++    V  K   L+H   DQ    +REI I+K +    IV+
Sbjct: 18  LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 74  LHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
              V     R  + +++E++  G L D +  H+ RL  +    Y  Q+   + +  S+  
Sbjct: 76  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 135
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LP-QQGVELLHTTCGTP-NYVAPEVLSNRGYD 187
            HRDL   N+L++S  ++K++DFGL+  LP  +   ++     +P  + APE LS+  + 
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 195
Query: 188 GSAADVWSCGVILFVLM 204
              +DVWS GV+L+ L 
Sbjct: 196 -RQSDVWSFGVVLYELF 211

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---IKREISIMKIVRHPNIVR 73
           +G+G F  V   +    G++    V  K   L+H   DQ    +REI I+K +    IV+
Sbjct: 31  LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 74  LHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
              V     R  + +++E++  G L D +  H+ RL  +    Y  Q+   + +  S+  
Sbjct: 89  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LP-QQGVELLHTTCGTP-NYVAPEVLSNRGYD 187
            HRDL   N+L++S  ++K++DFGL+  LP  +   ++     +P  + APE LS+  + 
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 208
Query: 188 GSAADVWSCGVILFVLM 204
              +DVWS GV+L+ L 
Sbjct: 209 -RQSDVWSFGVVLYELF 224

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 12/197 (6%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---IKREISIMKIVRHPNIVR 73
           +G+G F  V   +    G++    V  K   L+H   DQ    +REI I+K +    IV+
Sbjct: 19  LGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 74  LHEVL--ASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
              V     R  + +++E++  G L D +  H+ RL  +    Y  Q+   + +  S+  
Sbjct: 77  YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 136
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LP-QQGVELLHTTCGTP-NYVAPEVLSNRGYD 187
            HRDL   N+L++S  ++K++DFGL+  LP  +   ++     +P  + APE LS+  + 
Sbjct: 137 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS 196
Query: 188 GSAADVWSCGVILFVLM 204
              +DVWS GV+L+ L 
Sbjct: 197 -RQSDVWSFGVVLYELF 212

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 36/282 (12%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G F KV     R+ G  VA+K   + T    + +++ + EI  +   RHP++V L  
Sbjct: 47  IGHGVFGKVYKGVLRD-GAKVALK---RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA------HCHSKGV 130
               R ++ +I +++  G L   +   G  L      + Q+L   +       + H++ +
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC-----GTPNYVAPEVLSNRG 185
            HRD+K  N+LLD     K++DFG+S   ++G EL  T       GT  Y+ PE    +G
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGIS---KKGTELDQTHLXXVVKGTLGYIDPEYFI-KG 216
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
                +DV+S GV+LF ++       ++ LP   + +N AE++      +     + +I+
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQS-LPR--EMVNLAEWAV----ESHNNGQLEQIV 269
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKC---SEEEEVNLDDV 284
           DPN   +IR E +RK          VKC   S E+  ++ DV
Sbjct: 270 DPNLADKIRPESLRKF-----GDTAVKCLALSSEDRPSMGDV 306

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 36/282 (12%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G F KV     R+ G  VA+K   + T    + +++ + EI  +   RHP++V L  
Sbjct: 47  IGHGVFGKVYKGVLRD-GAKVALK---RRTPESSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA------HCHSKGV 130
               R ++ +I +++  G L   +   G  L      + Q+L   +       + H++ +
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLY--GSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC-----GTPNYVAPEVLSNRG 185
            HRD+K  N+LLD     K++DFG+S   ++G EL  T       GT  Y+ PE    +G
Sbjct: 161 IHRDVKSINILLDENFVPKITDFGIS---KKGTELGQTHLXXVVKGTLGYIDPEYFI-KG 216
Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL 245
                +DV+S GV+LF ++       ++ LP   + +N AE++      +     + +I+
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQS-LPR--EMVNLAEWAV----ESHNNGQLEQIV 269
Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKC---SEEEEVNLDDV 284
           DPN   +IR E +RK          VKC   S E+  ++ DV
Sbjct: 270 DPNLADKIRPESLRKF-----GDTAVKCLALSSEDRPSMGDV 306

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 2   KKQTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM 52
           K QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAF 226
Query: 53  VDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
           +    +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  
Sbjct: 227 L----QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGETG 274
Query: 113 RYFQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGV 163
           +Y +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +   
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 164 ELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                    P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 335 YTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 10/211 (4%)
Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-ILKHRMVDQIKREISIMKIVRHPNIV 72
           G  +GEG F  V       T  +VA+K LA    I    +  Q  +EI +M   +H N+V
Sbjct: 36  GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKI--VHQGRLLENDCR-RYFQQLIDAVAHCHSKG 129
            L    +    + ++  ++  G L D++  +     L    R +  Q   + +   H   
Sbjct: 94  ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPEVLSNRGYD 187
             HRD+K  N+LLD     K+SDFGL+   ++  + +  +   GT  Y+APE L  RG  
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--RGEI 211
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
              +D++S GV+L  ++ G     E   P L
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 2   KKQTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM 52
           K QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAF 226
Query: 53  VDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
           +    +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  
Sbjct: 227 L----QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGETG 274
Query: 113 RYFQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGV 163
           +Y +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +   
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 164 ELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                    P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 335 YTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI++E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 102/238 (42%), Gaps = 42/238 (17%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           ++ + IG G F +V     +  G+    VA+K L      K R       E SIM    H
Sbjct: 10  KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR--DFLSEASIMGQFDH 67
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PN++ L  V+   T V II EF+  G L D  + Q     ND +    QL+  +    + 
Sbjct: 68  PNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQ-----NDGQFTVIQLVGMLRGIAAG 121
Query: 129 GVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY------ 175
             Y       HR L   N+L++S    KVSDFGLS         L      P Y      
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLS-------RFLEDDTSDPTYTSALGG 174
Query: 176 ------VAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE 226
                  APE +  R +  SA+DVWS G++++ +M+ G  P+ +    T    INA E
Sbjct: 175 KIPIRWTAPEAIQYRKFT-SASDVWSYGIVMWEVMSYGERPYWDM---TNQDVINAIE 228

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 2   KKQTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM 52
           K QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     
Sbjct: 251 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAF 309
Query: 53  VDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
           +    +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  
Sbjct: 310 L----QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGETG 357
Query: 113 RYFQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGV 163
           +Y +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +   
Sbjct: 358 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417
Query: 164 ELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                    P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 418 YTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 465

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK---REISIMKIV 66
           + E+G  IG+G F +V     R  GE VA++++     ++    DQ+K   RE+   +  
Sbjct: 34  QLEIGELIGKGRFGQV--YHGRWHGE-VAIRLID----IERDNEDQLKAFKREVMAYRQT 86
Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHC 125
           RH N+V       S   + II     G  L+  +     +L+ N  R+  Q+++  + + 
Sbjct: 87  RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGL---SALPQQG--VELLHTTCGTPNYVAPEV 180
           H+KG+ H+DLK +N+  D+ G + ++DFGL   S + Q G   + L    G   ++APE+
Sbjct: 147 HAKGILHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEI 205
Query: 181 LSNRGYD--------GSAADVWSCGVILFVLMAGYLPF 210
           +     D           +DV++ G I + L A   PF
Sbjct: 206 IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF 243

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-ILKHRMVDQIKREISIMKIVRHPNIV 72
           G  +GEG F  V       T  +VA+K LA    I    +  Q  +EI +M   +H N+V
Sbjct: 36  GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 93
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKI--VHQGRLLENDCR-RYFQQLIDAVAHCHSKG 129
            L    +    + ++  ++  G L D++  +     L    R +  Q   + +   H   
Sbjct: 94  ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYD 187
             HRD+K  N+LLD     K+SDFGL+   ++  +  +     GT  Y+APE L  RG  
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--RGEI 211
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
              +D++S GV+L  ++ G     E   P L
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQL 242

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 25/271 (9%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           ++ +GR +G+G F  VR AQ ++   S   VA+K+L K+ I+    +++  RE + MK  
Sbjct: 24  QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEF 82
Query: 67  RHPNIVRLHEV-LASRTK-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            HP++ +L  V L SR K       +IL F+  G+L    +   R+ EN      Q L+ 
Sbjct: 83  DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL-HAFLLASRIGENPFNLPLQTLVR 141
Query: 121 -------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
                   + +  S+   HRDL   N +L     + V+DFGLS     G +     C + 
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG-DYYRQGCASK 200
Query: 174 ---NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKK-INAAEFS 228
               ++A E L++  Y    +DVW+ GV ++ +M  G  P+   +   +Y   I      
Sbjct: 201 LPVKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK 259
Query: 229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIR 259
            P         L+++    +PK R     +R
Sbjct: 260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLR 290

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI++E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVIEYMSKGSLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-ILKHRMVDQIKREISIMKIVRHPNIV 72
           G  +GEG F  V       T  +VA+K LA    I    +  Q  +EI +M   +H N+V
Sbjct: 30  GNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLV 87
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKI--VHQGRLLENDCR-RYFQQLIDAVAHCHSKG 129
            L    +    + ++  ++  G L D++  +     L    R +  Q   + +   H   
Sbjct: 88  ELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYD 187
             HRD+K  N+LLD     K+SDFGL+   ++  +  +     GT  Y+APE L  RG  
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--RGEI 205
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
              +D++S GV+L  ++ G     E   P L
Sbjct: 206 TPKSDIYSFGVVLLEIITGLPAVDEHREPQL 236

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 107/215 (49%), Gaps = 20/215 (9%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLA-KSTILKHRMVD---QIKREISIMKIVR 67
           E  + IG+G F  V   +  +    VA+K L    +  +  M++   + +RE+ IM  + 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR-RYFQQLIDAVAHCH 126
           HPNIV+L+ ++ +  +  +++EFV  G+L+ +++ +   ++   + R    +   + +  
Sbjct: 82  HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 127 SKG--VYHRDLKPENLLLDSYGN-----LKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++   + HRDL+  N+ L S         KV+DFGLS   QQ V  +    G   ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLGNFQWMAPE 196
Query: 180 VLS--NRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
            +      Y    AD +S  +IL+ ++ G  PF E
Sbjct: 197 TIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 2   KKQTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM 52
           K QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     
Sbjct: 168 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAF 226
Query: 53  VDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
           +    +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  
Sbjct: 227 L----QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVGEYMSKGSLLD-------FLKGETG 274
Query: 113 RYFQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGV 163
           +Y +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +   
Sbjct: 275 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
Query: 164 ELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                    P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 335 YTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 382

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 27  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 80
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 81  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 198
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 199 VWSFGILLTEIVTHGRIPY 217

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +   +++ K    +M  + H  +V+L
Sbjct: 10  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 64
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 124
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS                P  +  PEVL    +  S +D
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SSKSD 183
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 184 IWAFGVLMWEIYSLGKMPY 202

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 29  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 82
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 83  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 141
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 142 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 200
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 201 VWSFGILLTEIVTHGRIPY 219

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +   +++ K    +M  + H  +V+L
Sbjct: 14  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 68
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 69  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 128
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS                P  +  PEVL    +  S +D
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SSKSD 187
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 188 IWAFGVLMWEIYSLGKMPY 206

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 23  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 76
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 77  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 135
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 136 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 194
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 195 VWSFGILLTEIVTHGRIPY 213

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKIRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 21  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 74
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 75  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 192
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 193 VWSFGILLTEIVTHGRIPY 211

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 22  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 75
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 76  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 134
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 135 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 193
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 194 VWSFGILLTEIVTHGRIPY 212

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 21  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 74
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 75  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 192
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 193 VWSFGILLTEIVTHGRIPY 211

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +    D+   E  +M  + H  +V+L
Sbjct: 15  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQL 69
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 70  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS                P  +  PEVL    +  S +D
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SSKSD 188
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 189 IWAFGVLMWEIYSLGKMPY 207

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 30  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 83
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 84  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 142
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 143 DLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAI-NYGTFTIKSD 201
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 202 VWSFGILLTEIVTHGRIPY 220

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVRHPNIV 72
           + +GEG F+ V   +    G   A+K      IL H   D  + +RE  + ++  HPNI+
Sbjct: 35  QKLGEGGFSYVDLVEGLHDGHFYALK-----RILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 73  RLHEVL----ASRTKVYIILEFVTGGELFDKIVH---QGRLL-ENDCRRYFQQLIDAVAH 124
           RL         ++ + +++L F   G L+++I     +G  L E+        +   +  
Sbjct: 90  RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFG------------LSALPQQGVELLHTTCGT 172
            H+KG  HRDLKP N+LL   G   + D G              AL  Q  +     C T
Sbjct: 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ--DWAAQRC-T 206
Query: 173 PNYVAPEVLSNRGYD--GSAADVWSCGVILFVLMAGYLPF 210
            +Y APE+ S + +       DVWS G +L+ +M G  P+
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +   +++ K    +M  + H  +V+L
Sbjct: 21  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 75
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 76  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 135
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS                P  +  PEVL    +  S +D
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SSKSD 194
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 195 IWAFGVLMWEIYSLGKMPY 213

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +   +++ K    +M  + H  +V+L
Sbjct: 30  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 84
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 85  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 144
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS                P  +  PEVL    +  S +D
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF-SSKSD 203
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 204 IWAFGVLMWEIYSLGKMPY 222

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y++ R +G G +++V  A N    E VA+K+L      K       +    +  +   PN
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKK-----IKREIKILENLRGGPN 93
Query: 71  IVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           I+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +CHS
Sbjct: 94  IITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYCHS 149
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            G+ HRD+KP N+L+D  +  L++ D+GL+     G E  +    +  +  PE+L +   
Sbjct: 150 MGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDYQM 208
Query: 187 DGSAADVWSCGVILFVLMAGYLPF 210
              + D+WS G +L  ++    PF
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 27  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 80
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 81  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 139
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 140 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSD 198
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 199 VWSFGILLTEIVTHGRIPY 217

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 26  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 79
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 80  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 138
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 139 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSD 197
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 198 VWSFGILLTEIVTHGRIPY 216

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 35/207 (16%)
Query: 15  RTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
           + +G G F +V  A  N+ T   VA+K +   ++     V+    E ++MK ++H  +V+
Sbjct: 188 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVK 241
Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND--CRRYFQQLID-------AVAH 124
           LH V+ ++  +YII EF+  G L D        L++D   ++   +LID        +A 
Sbjct: 242 LHAVV-TKEPIYIITEFMAKGSLLD-------FLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
              +   HRDL+  N+L+ +    K++DFGL+ +   G +          + APE + N 
Sbjct: 294 IEQRNYIHRDLRAANILVSASLVCKIADFGLARV---GAKF------PIKWTAPEAI-NF 343
Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
           G     +DVWS G++L  ++  G +P+
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPY 370

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F  V++ + R   + VA+K++ + ++ +   +++ K    +M  + H  +V+L
Sbjct: 15  KELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAK----VMMNLSHEKLVQL 69
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  ++II E++  G L + +   + R          + + +A+ +  SK   HR
Sbjct: 70  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHR 129
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L++  G +KVSDFGLS                P  +  PEVL    +  S +D
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKF-SSKSD 188
Query: 193 VWSCGVILFVLMA-GYLPF 210
           +W+ GV+++ + + G +P+
Sbjct: 189 IWAFGVLMWEIYSLGKMPY 207

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 31  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 84
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 85  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 143
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 144 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSD 202
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 203 VWSFGILLTEIVTHGRIPY 221

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 16  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 69
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 70  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSD 187
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 188 VWSFGILLTEIVTHGRIPY 206

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 21  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 74
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 75  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 133
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 134 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSD 192
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 193 VWSFGILLTEIVTHGRIPY 211

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G+F  V   + +  G+ VA+K+L K            + E+++++  RH NI+ L  
Sbjct: 44  IGSGSFGTV--YKGKWHGD-VAVKIL-KVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFM 98
Query: 77  VLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDL 135
              ++  + I+ ++  G  L+  + V + +          +Q    + + H+K + HRD+
Sbjct: 99  GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 136 KPENLLLDSYGNLKVSDFGLSALPQQ--GVELLHTTCGTPNYVAPEVLSNRGYDGSA--A 191
           K  N+ L     +K+ DFGL+ +  +  G + +    G+  ++APEV+  +  +  +  +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 192 DVWSCGVILFVLMAGYLPFGETD 214
           DV+S G++L+ LM G LP+   +
Sbjct: 219 DVYSYGIVLYELMTGELPYSHIN 241

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVCEYMSKGSLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI++E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVMEYMSKGCLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF-GETDLPTLYKKI 222
                  P  + APE  +  G     +DVWS G++L  L   G +P+ G  +   L +  
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 223 NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIE 256
                 CP         L+ +    +P+ R   E
Sbjct: 230 RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFE 263

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 6/175 (3%)
Query: 40  KVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFD- 98
           KV  KS        D    E ++MK ++H  +VRL+ V+ ++  +YII E++  G L D 
Sbjct: 39  KVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDF 97
Query: 99  -KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA 157
            K     +L  N       Q+ + +A    +   HRDL+  N+L+    + K++DFGL+ 
Sbjct: 98  LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157
Query: 158 LPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           L +            P  + APE + N G     +DVWS G++L  ++  G +P+
Sbjct: 158 LIEDAEXTAREGAKFPIKWTAPEAI-NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G+F +V   ++++TG   A+K        K R+      E+     +  P IV L+ 
Sbjct: 66  VGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 117
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
            +     V I +E + GG L   I   G L E+    Y  Q ++ + + H++ + H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 137 PENLLLDSYGN-LKVSDFGLSALPQQ---GVELLHT--TCGTPNYVAPEVLSNRGYDGSA 190
            +N+LL S G+   + DFG +   Q    G  LL      GT  ++APEV+  +  D + 
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD-AK 236
Query: 191 ADVWSCGVILFVLMAGYLPF 210
            D+WS   ++  ++ G  P+
Sbjct: 237 VDIWSSCCMMLHMLNGCHPW 256

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V       T   VA+K L   T+     +    +E  +MK +RH  +V+L+ 
Sbjct: 19  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKLVQLYA 73
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLIDAVAHCHSKGVY--- 131
           V+ S   +YI+ E+++ G L D        L+ +  +Y +  QL+D  A   S   Y   
Sbjct: 74  VV-SEEPIYIVTEYMSKGSLLD-------FLKGETGKYLRLPQLVDMAAQIASGMAYVER 125
Query: 132 ----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
               HRDL+  N+L+      KV+DFGL+ L +            P  + APE  +  G 
Sbjct: 126 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGR 184
Query: 187 DGSAADVWSCGVILFVLMA-GYLPF 210
               +DVWS G++L  L   G +P+
Sbjct: 185 FTIKSDVWSFGILLTELTTKGRVPY 209

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G+F +V   ++++TG   A+K        K R+      E+     +  P IV L+ 
Sbjct: 82  VGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 133
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
            +     V I +E + GG L   I   G L E+    Y  Q ++ + + H++ + H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 137 PENLLLDSYGN-LKVSDFGLSALPQQ---GVELLHT--TCGTPNYVAPEVLSNRGYDGSA 190
            +N+LL S G+   + DFG +   Q    G  LL      GT  ++APEV+  +  D + 
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD-AK 252
Query: 191 ADVWSCGVILFVLMAGYLPF 210
            D+WS   ++  ++ G  P+
Sbjct: 253 VDIWSSCCMMLHMLNGCHPW 272

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  ++  PN
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLMGGPN 87
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 88  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 143
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 203 YDYS-LDMWSLGCMFAGMIFRKEPF 226

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V       T   VA+K L   T+     +    +E  +MK +RH  +V+L+ 
Sbjct: 17  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKLVQLYA 71
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLIDAVAHCHSKGVY--- 131
           V+ S   +YI+ E+++ G L D        L+ +  +Y +  QL+D  A   S   Y   
Sbjct: 72  VV-SEEPIYIVTEYMSKGSLLD-------FLKGEMGKYLRLPQLVDMAAQIASGMAYVER 123
Query: 132 ----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
               HRDL+  N+L+      KV+DFGL+ L +            P  + APE  +  G 
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGR 182
Query: 187 DGSAADVWSCGVILFVLMA-GYLPF 210
               +DVWS G++L  L   G +P+
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPY 207

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 103/236 (43%), Gaps = 40/236 (16%)
Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREI 60
           K  +    YE+   IG G++  V  A ++   ++VA+K   K   +   ++D  +I REI
Sbjct: 22  KNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIK---KVNRMFEDLIDCKRILREI 78
Query: 61  SIMKIVRHPNIVRLHEV-----LASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRR 113
           +I+  ++   I+RLH++     L    ++YI+LE       +LF   +    L E   + 
Sbjct: 79  TILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEQHVKT 135
Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL-------- 165
               L+      H  G+ HRDLKP N LL+   ++K+ DFGL+       ++        
Sbjct: 136 ILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 166 -----------------LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
                            L +   T  Y APE++  +    ++ D+WS G I   L+
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELL 251

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G+F +V   ++++TG   A+K        K R+      E+     +  P IV L+ 
Sbjct: 80  LGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLSSPRIVPLYG 131
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK 136
            +     V I +E + GG L   I   G L E+    Y  Q ++ + + H++ + H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 137 PENLLLDSYGN-LKVSDFGLSALPQQ---GVELLHT--TCGTPNYVAPEVLSNRGYDGSA 190
            +N+LL S G+   + DFG +   Q    G  LL      GT  ++APEV+  +  D + 
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD-AK 250
Query: 191 ADVWSCGVILFVLMAGYLPF 210
            D+WS   ++  ++ G  P+
Sbjct: 251 VDIWSSCCMMLHMLNGCHPW 270

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V       T   VA+K L   T+     +    +E  +MK +RH  +V+L+ 
Sbjct: 15  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKLVQLYA 69
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLIDAVAHCHSKGVY--- 131
           V+ S   +YI+ E+++ G L D        L+ +  +Y +  QL+D  A   S   Y   
Sbjct: 70  VV-SEEPIYIVTEYMSKGSLLD-------FLKGEMGKYLRLPQLVDMAAQIASGMAYVER 121
Query: 132 ----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
               HRDL+  N+L+      KV+DFGL+ L +            P  + APE  +  G 
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA-ALYGR 180
Query: 187 DGSAADVWSCGVILFVLMA-GYLPF 210
               +DVWS G++L  L   G +P+
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPY 205

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 1   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 58
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E++  G L D        L+ +  +Y
Sbjct: 59  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLD-------FLKGETGKY 107
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT 167
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 168 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 213

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 87
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 31/208 (14%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G F +V  A++R  G++  +K +  +        ++ +RE+  +  + H NIV  + 
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNG 71
Query: 77  VL-------------ASRTK---VYIILEFVTGGELFDKIVHQGRLLEND---CRRYFQQ 117
                          +SR+K   ++I +EF   G L ++ + + R  + D       F+Q
Sbjct: 72  CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTL-EQWIEKRRGEKLDKVLALELFEQ 130
Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGVELLHTTCGTPNYV 176
           +   V + HSK + +RDLKP N+ L     +K+ DFGL ++L   G      + GT  Y+
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX--RSKGTLRYM 188
Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLM 204
           +PE +S++ Y G   D+++ G+IL  L+
Sbjct: 189 SPEQISSQDY-GKEVDLYALGLILAELL 215

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 1   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 58
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E++  G L D        L+ +  +Y
Sbjct: 59  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMNKGSLLD-------FLKGETGKY 107
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 108 LRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 167
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 168 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 213

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 105/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL   N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 34  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 88
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 89  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 144
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 203
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 204 YDYS-LDMWSLGCMFAGMIFRKEPF 227

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 34  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLXGGPN 88
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 89  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 144
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 203
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 204 YDYS-LDMWSLGCMFAGMIFRKEPF 227

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLXGGPN 87
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 88  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 143
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 203 YDYS-LDMWSLGCMFAGMIFRKEPF 226

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 87
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 88  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 143
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 203 YDYS-LDMWSLGCMFAGMIFRKEPF 226

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLA-KSTILKHRMVD---QIKREISIMKIVR 67
           E  + IG+G F  V   +  +    VA+K L    +  +  M++   + +RE+ IM  + 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR-RYFQQLIDAVAHCH 126
           HPNIV+L+ ++ +  +  +++EFV  G+L+ +++ +   ++   + R    +   + +  
Sbjct: 82  HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 127 SKG--VYHRDLKPENLLLDSYGN-----LKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++   + HRDL+  N+ L S         KV+DFG S   QQ V  +    G   ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS---QQSVHSVSGLLGNFQWMAPE 196
Query: 180 VLS--NRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
            +      Y    AD +S  +IL+ ++ G  PF E
Sbjct: 197 TIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 87
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 88  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 143
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 203 YDYS-LDMWSLGCMFAGMIFRKEPF 226

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 2   KKQTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM 52
           K QT+ +AK  +E+ R        +G+G F +V       T   VA+K L    +     
Sbjct: 169 KPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGNMSPEAF 227
Query: 53  VDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
           +    +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  
Sbjct: 228 L----QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLD-------FLKGEMG 275
Query: 113 RYFQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGV 163
           +Y +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL  L +   
Sbjct: 276 KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE 335
Query: 164 ELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                    P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 336 YTARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 383

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLXGGPN 87
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 88  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 143
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 203 YDYS-LDMWSLGCMFAGMIFRKEPF 226

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 35  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLCGGPN 89
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 90  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 145
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 146 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 204
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 205 YDYS-LDMWSLGCMFAGMIFRKEPF 228

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 33  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLXGGPN 87
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 88  IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYPT-LTDYDIRYYIYELLKALDYCHS 143
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 202
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 203 YDYS-LDMWSLGCMFAGMIFRKEPF 226

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 72
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 4   QTRRVAK--YEVGR-------TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD 54
           QT+ +AK  +E+ R        +G+G F +V       T   VA+K L   T+     + 
Sbjct: 4   QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL- 61
Query: 55  QIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
              +E  +MK +RH  +V+L+ V+ S   +YI+ E+++ G L D        L+ +  +Y
Sbjct: 62  ---QEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGCLLD-------FLKGEMGKY 110
Query: 115 FQ--QLIDAVAHCHSKGVY-------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
            +  QL+D  A   S   Y       HRDL+  N+L+      KV+DFGL+ L +     
Sbjct: 111 LRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 170
Query: 166 LHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
                  P  + APE  +  G     +DVWS G++L  L   G +P+
Sbjct: 171 ARQGAKFPIKWTAPEA-ALYGRFTIKSDVWSFGILLTELTTKGRVPY 216

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 20/215 (9%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLA-KSTILKHRMVD---QIKREISIMKIVR 67
           E  + IG+G F  V   +  +    VA+K L    +  +  M++   + +RE+ IM  + 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR-RYFQQLIDAVAHCH 126
           HPNIV+L+ ++ +  +  +++EFV  G+L+ +++ +   ++   + R    +   + +  
Sbjct: 82  HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 127 SKG--VYHRDLKPENLLLDSYGN-----LKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++   + HRDL+  N+ L S         KV+DF LS   QQ V  +    G   ++APE
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS---QQSVHSVSGLLGNFQWMAPE 196
Query: 180 VLS--NRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
            +      Y    AD +S  +IL+ ++ G  PF E
Sbjct: 197 TIGAEEESYT-EKADTYSFAMILYTILTGEGPFDE 230

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 25  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 80
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 81  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 256

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 21  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 76
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 77  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 252

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 24  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 79
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 80  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 255

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 87
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 87
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 58/287 (20%)
Query: 9   AKYEVGRTIGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           A+YE+  T+GEG F KV     ++  G  VA+K++        R  +  + EI +++ + 
Sbjct: 14  ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLN 69
Query: 68  --HPN----IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRL--LENDCRRYFQQLI 119
              PN     V++ E       + I+ E + G   +D I   G L    +  R+   Q+ 
Sbjct: 70  TTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 120 DAVAHCHSKGVYHRDLKPENLLL------DSYG-------------NLKVSDFGLSALPQ 160
            +V   HS  + H DLKPEN+L       ++Y              ++KV DFG +    
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK 220
              E   T   T +Y APEV+   G+     DVWS G IL     G+  F   D      
Sbjct: 189 ---EHHSTLVSTRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHD------ 238
Query: 221 KINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                        S    +++ +IL P PK    I+  RK  +F  +
Sbjct: 239 -------------SKEHLAMMERILGPLPKH--MIQKTRKRKYFHHD 270

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 16/205 (7%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV R +G G +++V    N    E   +K+L      K       +    +  +   PN
Sbjct: 54  YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKK-----IKREIKILQNLXGGPN 108
Query: 71  IVRLHEVLA---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           IV+L +++    S+T   +I E+V   +   K+++   L + D R Y  +L+ A+ +CHS
Sbjct: 109 IVKLLDIVRDQHSKTPS-LIFEYVNNTDF--KVLYP-TLTDYDIRYYIYELLKALDYCHS 164
Query: 128 KGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-RG 185
           +G+ HRD+KP N+++D     L++ D+GL+     G E  +    +  +  PE+L + + 
Sbjct: 165 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-YNVRVASRYFKGPELLVDLQD 223
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
           YD S  D+WS G +   ++    PF
Sbjct: 224 YDYS-LDMWSLGCMFAGMIFRKEPF 247

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 32  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 87
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            +TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KNTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 34/237 (14%)
Query: 13  VGRTIGEGTFAKVRFAQ---------NRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           +G+ +GEG F +V  A+         NR T   VA+K+L KS   +  + D I  E+ +M
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVT--KVAVKML-KSDATEKDLSDLIS-EMEMM 128
Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRL 106
           K++ +H NI+ L         +Y+I+E+ + G L + +                  + +L
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
              D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+          
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 167 HTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
            TT G     ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 17  IGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           +G G F +V     N  T   VA+K L + ++      D    E ++MK ++H  +VRL+
Sbjct: 17  LGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSP----DAFLAEANLMKQLQHQRLVRLY 70
Query: 76  EVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            V+ ++  +YII E++  G L D  K     +L  N       Q+ + +A    +   HR
Sbjct: 71  AVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           +L+  N+L+    + K++DFGL+ L +            P  + APE + N G     +D
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGTFTIKSD 188
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS G++L  ++  G +P+
Sbjct: 189 VWSFGILLTEIVTHGRIPY 207

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 42/231 (18%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVR 67
           +YE+   IG G++  V  A ++     VA+K + +   +   ++D  +I REI+I+  + 
Sbjct: 54  RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR---VFEDLIDCKRILREIAILNRLN 110
Query: 68  HPNIVRLHEVLASRT-----KVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLID 120
           H ++V++ +++  +      ++Y++LE       +LF   V+   L E   +     L+ 
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVY---LTELHIKTLLYNLLV 167
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQG--------------- 162
            V + HS G+ HRDLKP N L++   ++KV DFGL+     P+ G               
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 163 VELLHTT---------CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
           V   HT            T  Y APE++  +     A DVWS G I   L+
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG G F  V         + VA+K + + ++ +    D    E  +M  + HP +V+L
Sbjct: 33  QEIGSGQFGLVHLGYWLNK-DKVAIKTIKEGSMSE----DDFIEEAEVMMKLSHPKLVQL 87
Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  + ++ EF+  G L D +   +G             + + +A+     V HR
Sbjct: 88  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 147
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +D
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSD 206
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS GV+++ V   G +P+
Sbjct: 207 VWSFGVLMWEVFSEGKIPY 225

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 25  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 82
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 83  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 202
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 203 KKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 259

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 82  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 139
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 259
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 260 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 316

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 23  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 80
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 81  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYY 200
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 201 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 257

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G+G F +V       T   VA+K L   T+     +    +E  +MK +RH  +V+L+ 
Sbjct: 16  LGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKLVQLYA 70
Query: 77  VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ--QLIDAVAHCHSKGVY--- 131
           V+ S   + I+ E+++ G L D        L+ +  +Y +  QL+D  A   S   Y   
Sbjct: 71  VV-SEEPIXIVTEYMSKGSLLD-------FLKGETGKYLRLPQLVDMAAQIASGMAYVER 122
Query: 132 ----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
               HRDL+  N+L+      KV+DFGL+ L +            P  + APE  +  G 
Sbjct: 123 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEA-ALYGR 181
Query: 187 DGSAADVWSCGVILFVLMA-GYLPF 210
               +DVWS G++L  L   G +P+
Sbjct: 182 FTIKSDVWSFGILLTELTTKGRVPY 206

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG G F  V         + VA+K + +  + +   ++    E  +M  + HP +V+L
Sbjct: 13  QEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQL 67
Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  + ++ EF+  G L D +   +G             + + +A+     V HR
Sbjct: 68  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHR 127
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +D
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSD 186
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS GV+++ V   G +P+
Sbjct: 187 VWSFGVLMWEVFSEGKIPY 205

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 28  KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 85
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 86  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 205
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 206 KKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 262

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 91  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 146
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 205
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPF 231

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L K    +  + D +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKML-KDDATEEDLSDLVS-EMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 90  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 145
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 146 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 204
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 205 QMYDYSLDMWSLGCMLASMIFRKEPF 230

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 91  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 146
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 205
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 206 QMYDYSLDMWSLGCMLASMIFRKEPF 231

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 10/211 (4%)
Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-ILKHRMVDQIKREISIMKIVRHPNIV 72
           G   GEG F  V       T  +VA+K LA    I    +  Q  +EI +    +H N+V
Sbjct: 27  GNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLV 84
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKI--VHQGRLLENDCR-RYFQQLIDAVAHCHSKG 129
            L    +    + ++  +   G L D++  +     L    R +  Q   + +   H   
Sbjct: 85  ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPEVLSNRGYD 187
             HRD+K  N+LLD     K+SDFGL+   ++  + +  +   GT  Y APE L  RG  
Sbjct: 145 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--RGEI 202
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
              +D++S GV+L  ++ G     E   P L
Sbjct: 203 TPKSDIYSFGVVLLEIITGLPAVDEHREPQL 233

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 12/222 (5%)
Query: 17  IGEGTFAKVR--FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  VR    + R+    VA+KVL + T  +    +++ RE  IM  + +P IVRL
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHR 133
             V  +   + +++E   GG L   +V +   +  ++      Q+   + +   K   HR
Sbjct: 76  IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP--NYVAPEVLSNRGYDGSA 190
           DL   N+LL +    K+SDFGLS AL          + G     + APE ++ R +  S 
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SR 193
Query: 191 ADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAE-FSCP 230
           +DVWS GV ++  L  G  P+ +   P +   I   +   CP
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG G F  V         + VA+K + +  + +   ++    E  +M  + HP +V+L
Sbjct: 11  QEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQL 65
Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  + ++ EF+  G L D +   +G             + + +A+     V HR
Sbjct: 66  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 125
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +D
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSD 184
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS GV+++ V   G +P+
Sbjct: 185 VWSFGVLMWEVFSEGKIPY 203

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 97  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLYQT-LTDYDIRFYMYEILKALDYC 152
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 153 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 211
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 212 QMYDYSLDMWSLGCMLASMIFRKEPF 237

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG G F  V         + VA+K + +  + +   ++    E  +M  + HP +V+L
Sbjct: 16  QEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQL 70
Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  + ++ EF+  G L D +   +G             + + +A+     V HR
Sbjct: 71  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 130
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +D
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSD 189
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS GV+++ V   G +P+
Sbjct: 190 VWSFGVLMWEVFSEGKIPY 208

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG G F  V         + VA+K + +  + +   ++    E  +M  + HP +V+L
Sbjct: 13  QEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQL 67
Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  + ++ EF+  G L D +   +G             + + +A+     V HR
Sbjct: 68  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 127
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +D
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSD 186
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS GV+++ V   G +P+
Sbjct: 187 VWSFGVLMWEVFSEGKIPY 205

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 14/259 (5%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G +  V   ++  +G+  A+K +  +   + +       +IS  + V  P  V  + 
Sbjct: 42  LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS-XRTVDCPFTVTFYG 100
Query: 77  VLASRTKVYIILEF--VTGGELFDKIVHQGRLLENDC-RRYFQQLIDAVAHCHSK-GVYH 132
            L     V+I  E    +  + + +++ +G+ +  D   +    ++ A+ H HSK  V H
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 160
Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE----VLSNRGYDG 188
           RD+KP N+L+++ G +K  DFG+S      V       G   Y APE     L+ +GY  
Sbjct: 161 RDVKPSNVLINALGQVKXCDFGISGYLVDDVA-KDIDAGCKPYXAPERINPELNQKGY-S 218
Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLP--TLYKKINAAEFSCPF-WFSTGATSLIHKIL 245
             +D+WS G+    L     P+     P   L + +       P   FS        + L
Sbjct: 219 VKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCL 278
Query: 246 DPNPKTRIRIEGIRKHPWF 264
             N K R     + +HP+F
Sbjct: 279 KKNSKERPTYPELXQHPFF 297

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+E+ + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     ++++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 13  VGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + R +GEG F +V    +  ++    +VA+K   K   L ++  ++   E  IMK + HP
Sbjct: 12  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 69
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR--------YFQQLIDA 121
           +IV+L  ++      +II+E    GEL       G  LE +           Y  Q+  A
Sbjct: 70  HIVKLIGIIEEEP-TWIIMELYPYGEL-------GHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEV 180
           +A+  S    HRD+   N+L+ S   +K+ DFGLS   +       +    P  +++PE 
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 181
Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           ++ R +  +A+DVW   V ++ +L  G  PF
Sbjct: 182 INFRRF-TTASDVWMFAVCMWEILSFGKQPF 211

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 58  REISIMKIVRHPNIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQG--------RLL 107
           REI++++ ++HPN++ L +V  S    KV+++ ++           H+         +L 
Sbjct: 67  REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 108 ENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSAL---PQ 160
               +    Q++D + + H+  V HRDLKP N+L+       G +K++D G + L   P 
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL 186
Query: 161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
           + +  L     T  Y APE+L    +   A D+W+ G I   L+  
Sbjct: 187 KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 9/146 (6%)
Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   ++ E V   +   K + Q  L + D R Y  +++ A+ +C
Sbjct: 92  PNIITLADIVKDPVSRTPA-LVFEHVNNTDF--KQLRQT-LTDYDIRFYMYEILKALDYC 147
Query: 126 HSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E  +    +  +  PE+L + 
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLVDY 206
Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF 210
                + D+WS G +L  ++    PF
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPF 232

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 98/233 (42%), Gaps = 41/233 (17%)
Query: 11  YEVGRTIGEGTFAKVRFAQNR-ETG--ESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +++   IGEGTF+ V  A  + + G  E +A+K L  ++   H +  +I  E+  + +  
Sbjct: 23  FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPI--RIAAELQCLTVAG 77
Query: 68  -HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
              N++ +         V I + ++      D +     L   + R Y   L  A+   H
Sbjct: 78  GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIH 134
Query: 127 SKGVYHRDLKPENLLLDS-YGNLKVSDFGLS-ALPQQGVELLH----------------T 168
             G+ HRD+KP N L +       + DFGL+       +ELL                 +
Sbjct: 135 QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCS 194
Query: 169 TC-----------GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
            C           GTP + APEVL+      +A D+WS GVI   L++G  PF
Sbjct: 195 ICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 13  VGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + R +GEG F +V    +  ++    +VA+K   K   L ++  ++   E  IMK + HP
Sbjct: 28  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 85
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR--------YFQQLIDA 121
           +IV+L  ++      +II+E    GEL       G  LE +           Y  Q+  A
Sbjct: 86  HIVKLIGIIEEEP-TWIIMELYPYGEL-------GHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEV 180
           +A+  S    HRD+   N+L+ S   +K+ DFGLS   +       +    P  +++PE 
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 197
Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           ++ R +  +A+DVW   V ++ +L  G  PF
Sbjct: 198 INFRRFT-TASDVWMFAVCMWEILSFGKQPF 227

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 13  VGRTIGEGTFAKVR---FAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + R +GEG F +V    +  ++    +VA+K   K   L ++  ++   E  IMK + HP
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHP 73
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR--------YFQQLIDA 121
           +IV+L  ++      +II+E    GEL       G  LE +           Y  Q+  A
Sbjct: 74  HIVKLIGIIEEEP-TWIIMELYPYGEL-------GHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEV 180
           +A+  S    HRD+   N+L+ S   +K+ DFGLS   +       +    P  +++PE 
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 185
Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           ++ R +  +A+DVW   V ++ +L  G  PF
Sbjct: 186 INFRRFT-TASDVWMFAVCMWEILSFGKQPF 215

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 104/221 (47%), Gaps = 44/221 (19%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           IG G F +V  A++R  G++  ++ +  +        ++ +RE+  +  + H NIV  + 
Sbjct: 20  IGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAEREVKALAKLDHVNIVHYNG 72
Query: 77  VL--------------------------ASRTK---VYIILEFVTGGELFDKIVHQGRLL 107
                                       +SR+K   ++I +EF   G L ++ + + R  
Sbjct: 73  CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTL-EQWIEKRRGE 131
Query: 108 END---CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGV 163
           + D       F+Q+   V + HSK + HRDLKP N+ L     +K+ DFGL ++L   G 
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 191
Query: 164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
                + GT  Y++PE +S++ Y G   D+++ G+IL  L+
Sbjct: 192 RT--RSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELL 229

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + IG G F  V         + VA+K + +  + +   ++    E  +M  + HP +V+L
Sbjct: 14  QEIGSGQFGLVHLGYWLNK-DKVAIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQL 68
Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           + V   +  + ++ EF+  G L D +   +G             + + +A+     V HR
Sbjct: 69  YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHR 128
Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGSAAD 192
           DL   N L+     +KVSDFG++           T    P  + +PEV S   Y  S +D
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS-SKSD 187
Query: 193 VWSCGVILF-VLMAGYLPF 210
           VWS GV+++ V   G +P+
Sbjct: 188 VWSFGVLMWEVFSEGKIPY 206

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 117/287 (40%), Gaps = 58/287 (20%)
Query: 9   AKYEVGRTIGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           A+YE+  T+GEG F KV     ++  G  VA+K++        R  +  + EI +++ + 
Sbjct: 14  ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD----RYCEAARSEIQVLEHLN 69
Query: 68  --HPN----IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRL--LENDCRRYFQQLI 119
              PN     V++ E       + I+ E + G   +D I   G L    +  R+   Q+ 
Sbjct: 70  TTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 120 DAVAHCHSKGVYHRDLKPENLLL------DSYG-------------NLKVSDFGLSALPQ 160
            +V   HS  + H DLKPEN+L       ++Y              ++KV DFG +    
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK 220
              E   T     +Y APEV+   G+     DVWS G IL     G+  F   D      
Sbjct: 189 ---EHHSTLVXXRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTHD------ 238
Query: 221 KINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                        S    +++ +IL P PK    I+  RK  +F  +
Sbjct: 239 -------------SKEHLAMMERILGPLPKH--MIQKTRKRKYFHHD 270

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 21/218 (9%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           +K   + + +YE+   IG+G+F +V  A +R   E VA+K++      K   ++Q + E+
Sbjct: 46  VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEV 101
Query: 61  SIMKIVRHPN------IVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCR 112
            +++++   +      IV L      R  + ++ E ++    +L      +G  L N  R
Sbjct: 102 RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSL-NLTR 160
Query: 113 RYFQQLIDAVAHCHSK--GVYHRDLKPENLLL--DSYGNLKVSDFGLSALPQQGVELLHT 168
           ++ QQ+  A+    +    + H DLKPEN+LL       +K+ DFG S    Q  + ++ 
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC---QLGQRIYQ 217
Query: 169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
              +  Y +PEVL    YD  A D+WS G IL  +  G
Sbjct: 218 XIQSRFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTG 254

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+ + + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 24/227 (10%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G G F +V +         VA+K L   T+     ++    E  IMK ++H  +V+L
Sbjct: 15  KRLGNGQFGEV-WMGTWNGNTKVAIKTLKPGTMSPESFLE----EAQIMKKLKHDKLVQL 69
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVY-- 131
           + V+ S   +YI+ E++  G L D +   +GR L+         L+D  A   +   Y  
Sbjct: 70  YAVV-SEEPIYIVTEYMNKGSLLDFLKDGEGRALK------LPNLVDMAAQVAAGMAYIE 122
Query: 132 -----HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRG 185
                HRDL+  N+L+ +    K++DFGL+ L +            P  + APE  +  G
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEA-ALYG 181
Query: 186 YDGSAADVWSCGVILFVLMA-GYLPF-GETDLPTLYKKINAAEFSCP 230
                +DVWS G++L  L+  G +P+ G  +   L +        CP
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCP 228

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 21/218 (9%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           +K   + + +YE+   IG+G+F +V  A +R   E VA+K++      K   ++Q + E+
Sbjct: 27  VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEV 82
Query: 61  SIMKIVRHPN------IVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCR 112
            +++++   +      IV L      R  + ++ E ++    +L      +G  L N  R
Sbjct: 83  RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSL-NLTR 141
Query: 113 RYFQQLIDAVAHCHSK--GVYHRDLKPENLLL--DSYGNLKVSDFGLSALPQQGVELLHT 168
           ++ QQ+  A+    +    + H DLKPEN+LL       +K+ DFG S    Q  + ++ 
Sbjct: 142 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC---QLGQRIYQ 198
Query: 169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
              +  Y +PEVL    YD  A D+WS G IL  +  G
Sbjct: 199 XIQSRFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTG 235

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 30/238 (12%)
Query: 10  KYEVGRTIGEGTFAKVRFAQ-------NRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           K  +G+ +GEG F +V  A+         +   +VA+K+L      K   +  +  E+ +
Sbjct: 36  KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKD--LSDLVSEMEM 93
Query: 63  MKIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI----------------VHQGR 105
           MK++ +H NI+ L         +Y+I+ + + G L + +                V + +
Sbjct: 94  MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           +   D      QL   + +  S+   HRDL   N+L+     +K++DFGL+         
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 166 LHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYK 220
             TT G     ++APE L +R Y    +DVWS GV+++ +   G  P+    +  L+K
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 21/218 (9%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           +K   + + +YE+   IG+G+F +V  A +R   E VA+K++      K   ++Q + E+
Sbjct: 46  VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN----KKAFLNQAQIEV 101
Query: 61  SIMKIVRHPN------IVRLHEVLASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCR 112
            +++++   +      IV L      R  + ++ E ++    +L      +G  L N  R
Sbjct: 102 RLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSL-NLTR 160
Query: 113 RYFQQLIDAVAHCHSK--GVYHRDLKPENLLL--DSYGNLKVSDFGLSALPQQGVELLHT 168
           ++ QQ+  A+    +    + H DLKPEN+LL       +K+ DFG S    Q  + ++ 
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSC---QLGQRIYQ 217
Query: 169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
              +  Y +PEVL    YD  A D+WS G IL  +  G
Sbjct: 218 XIQSRFYRSPEVLLGMPYD-LAIDMWSLGCILVEMHTG 254

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD--QIKREISIMKIVRH 68
           Y +   IG G++  V  A ++ T ++VA+K + +   +   ++D  +I REI+I+  ++ 
Sbjct: 28  YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR---MFEDLIDCKRILREITILNRLKS 84
Query: 69  PNIVRLHEV-----LASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLIDA 121
             I+RL+++     L    ++YI+LE       +LF   +    L E   +     L+  
Sbjct: 85  DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF---LTEEHIKTILYNLLLG 141
Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL---------------- 165
               H  G+ HRDLKP N LL+   ++KV DFGL+       +                 
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 166 ------LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLM 204
                 L +   T  Y APE++  +     + D+WS G I   L+
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 12/222 (5%)
Query: 17  IGEGTFAKVRFA--QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  VR    + R+    VA+KVL + T  +    +++ RE  IM  + +P IVRL
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE-NDCRRYFQQLIDAVAHCHSKGVYHR 133
             V  +   + +++E   GG L   +V +   +  ++      Q+   + +   K   HR
Sbjct: 402 IGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT-P-NYVAPEVLSNRGYDGSA 190
           +L   N+LL +    K+SDFGLS AL          + G  P  + APE ++ R +  S 
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SR 519
Query: 191 ADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINAAE-FSCP 230
           +DVWS GV ++  L  G  P+ +   P +   I   +   CP
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 561

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 89/352 (25%), Positives = 138/352 (39%), Gaps = 83/352 (23%)
Query: 10  KYEVGRTIGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           +YE+  T+GEGTF +V +   +R  G  VA+K++      K    +  + EI++++ +  
Sbjct: 34  RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINVLEKINE 89
Query: 69  PN------IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE--NDCRRYFQQLID 120
            +       V++ +       + I  E + G   FD +     L    +  R    QL  
Sbjct: 90  KDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ 148
Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYG-----NL--------------KVSDFGLSALPQQ 161
           AV   H   + H DLKPEN+L  +       NL              +V DFG +     
Sbjct: 149 AVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDH- 207
Query: 162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK 221
             E   T   T +Y APEV+   G+     DVWS G I+F    G+         TL++ 
Sbjct: 208 --EHHSTIVSTRHYRAPEVILELGW-SQPCDVWSIGCIIFEYYVGF---------TLFQT 255
Query: 222 INAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWF----------------- 264
            +  E            +++ +IL P P   IR    RK  +F                 
Sbjct: 256 HDNRE----------HLAMMERILGPIPSRMIR--KTRKQKYFYRGRLDWDENTSAGRYV 303
Query: 265 RKNYNPVK---CSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGPLLMNAF 313
           R+N  P++    SE EE      H +FD IE     E ++    G  L + F
Sbjct: 304 RENCKPLRRYLTSEAEE-----HHQLFDLIESMLEYEPAKRLTLGEALQHPF 350

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR--------RYFQQLI 119
           HPN++R +    +   +YI LE          +V    + + + +           +Q+ 
Sbjct: 86  HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYG-----------NLK--VSDFGLSALPQQGVEL- 165
             VAH HS  + HRDLKP+N+L+ +             NL+  +SDFGL      G    
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 166 ---LHTTCGTPNYVAPEVL--SNRGYDGSAADVWSCG-VILFVLMAGYLPFGET---DLP 216
              L+   GT  + APE+L  S +     + D++S G V  ++L  G  PFG+    +  
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
Query: 217 TLYKKINAAEFSCPFWFS--TGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            +    +  E  C    S    AT LI +++D +P  R     + +HP F
Sbjct: 264 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 35/230 (15%)
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR--------RYFQQLI 119
           HPN++R +    +   +YI LE          +V    + + + +           +Q+ 
Sbjct: 86  HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYG-----------NLK--VSDFGLSALPQQGVEL- 165
             VAH HS  + HRDLKP+N+L+ +             NL+  +SDFGL      G    
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 166 ---LHTTCGTPNYVAPEVL--SNRGYDGSAADVWSCG-VILFVLMAGYLPFGET---DLP 216
              L+   GT  + APE+L  S +     + D++S G V  ++L  G  PFG+    +  
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN 263
Query: 217 TLYKKINAAEFSCPFWFS--TGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            +    +  E  C    S    AT LI +++D +P  R     + +HP F
Sbjct: 264 IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 22/220 (10%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV----R 67
           + G+T+G G F KV  A     G+  A+  +A   +      D+ +  +S +KI+    +
Sbjct: 49  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND--------------CRR 113
           H NIV L         V +I E+   G+L + +  + R+LE D                 
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT 172
           +  Q+   +A   SK   HRD+   N+LL +    K+ DFGL+  +      ++      
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 173 P-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
           P  ++APE + +  Y    +DVWS G++L+ + + G  P+
Sbjct: 229 PVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPY 267

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 22/220 (10%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV----R 67
           + G+T+G G F KV  A     G+  A+  +A   +      D+ +  +S +KI+    +
Sbjct: 49  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND--------------CRR 113
           H NIV L         V +I E+   G+L + +  + R+LE D                 
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT 172
           +  Q+   +A   SK   HRD+   N+LL +    K+ DFGL+  +      ++      
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 173 P-NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           P  ++APE + +  Y    +DVWS G++L+ +   G  P+
Sbjct: 229 PVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPY 267

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--- 57
            K +  + A+Y + R +G G F+ V  A++      VAMK++    +      D+IK   
Sbjct: 11  FKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 58  --------REIS-----IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGE----LFDKI 100
                   +E S     I+K++ H N    H+       V++++ F   GE    L  K 
Sbjct: 71  RVNDADNTKEDSMGANHILKLLDHFN----HK---GPNGVHVVMVFEVLGENLLALIKKY 123
Query: 101 VHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLL---DSYGNL---KVSDF 153
            H+G  L    ++  +QL+  + + H + G+ H D+KPEN+L+   DS  NL   K++D 
Sbjct: 124 EHRGIPLIY-VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182
Query: 154 GLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           G +       E    +  T  Y +PEVL    + G  AD+WS   ++F L+ G   F
Sbjct: 183 GNACWYD---EHYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLF 235

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 39/237 (16%)
Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--- 57
            K +  + A+Y + R +G G F+ V  A++      VAMK++    +      D+IK   
Sbjct: 11  FKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 58  --------REIS-----IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGE----LFDKI 100
                   +E S     I+K++ H N    H+       V++++ F   GE    L  K 
Sbjct: 71  RVNDADNTKEDSMGANHILKLLDHFN----HK---GPNGVHVVMVFEVLGENLLALIKKY 123
Query: 101 VHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLL---DSYGNL---KVSDF 153
            H+G  L    ++  +QL+  + + H + G+ H D+KPEN+L+   DS  NL   K++D 
Sbjct: 124 EHRGIPLIY-VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADL 182
Query: 154 GLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           G +       E    +  T  Y +PEVL    + G  AD+WS   ++F L+ G   F
Sbjct: 183 GNACWYD---EHYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLF 235

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 15/218 (6%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE+V    A+KVL ++T  K     +I  E  +M  V  P 
Sbjct: 23  KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKAN--KEILDEAYVMAGVGSPY 80
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V ++ + +  G L D +  ++GRL   D   +  Q+   +++     
Sbjct: 81  VSRLLGICLTST-VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ S  ++K++DFGL+ L        H   G  P  ++A E +  R + 
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFT 199
Query: 188 GSAADVWSCGVILFVLMA-GYLPFG---ETDLPTLYKK 221
              +DVWS GV ++ LM  G  P+      ++P L +K
Sbjct: 200 -HQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK 236

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 17  IGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIV 72
           IGEG F +V  A+ ++ G   ++   ++   ++   HR       E+ ++ K+  HPNI+
Sbjct: 23  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCKLGHHPNII 79
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND----------CRRYFQQLIDAV 122
            L      R  +Y+ +E+   G L D  + + R+LE D               QQL+   
Sbjct: 80  NLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 123 A-------HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-N 174
           A       +   K   HRDL   N+L+      K++DFGLS    Q V +  T    P  
Sbjct: 139 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVR 196
Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
           ++A E L+   Y  + +DVWS GV+L+ +++ G  P+       LY+K+
Sbjct: 197 WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 17  IGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIV 72
           IGEG F +V  A+ ++ G   ++   ++   ++   HR       E+ ++ K+  HPNI+
Sbjct: 33  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCKLGHHPNII 89
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND----------CRRYFQQLIDAV 122
            L      R  +Y+ +E+   G L D  + + R+LE D               QQL+   
Sbjct: 90  NLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 123 A-------HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-N 174
           A       +   K   HRDL   N+L+      K++DFGLS    Q V +  T    P  
Sbjct: 149 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVR 206
Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
           ++A E L+   Y  + +DVWS GV+L+ +++ G  P+       LY+K+
Sbjct: 207 WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 11  YEVGRTIGEG--TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG+G      V  A+ + TGE V ++ +       + MV  ++ E+ + K+  H
Sbjct: 11  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNH 69
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCH 126
           PNIV       +  +++++  F+  G   D I       + E       Q ++ A+ + H
Sbjct: 70  PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 129
Query: 127 SKGVYHRDLKPENLLLDSYG---------NLKVSDFG-----LSALPQQGVELLHTTCGT 172
             G  HR +K  ++L+   G         NL +   G     +   P+  V++L      
Sbjct: 130 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL------ 183
Query: 173 PNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT---LYKKINAA 225
             +++PEVL    +GYD + +D++S G+    L  G++PF   D+P    L +K+N  
Sbjct: 184 -PWLSPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPF--KDMPATQMLLEKLNGT 237

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 20/157 (12%)
Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGVELLHTT 169
           C   F Q+ +AV   HSKG+ HRDLKP N+       +KV DFGL +A+ Q   E    T
Sbjct: 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 170 -----------CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
                       GT  Y++PE +    Y     D++S G+ILF L+  +     T +  +
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNY-SHKVDIFSLGLILFELLYSF----STQMERV 280
Query: 219 YKKINAAEFSCPFWFSTGATS---LIHKILDPNPKTR 252
               +      P  F+        ++  +L P+P  R
Sbjct: 281 RIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER 317

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 107/238 (44%), Gaps = 34/238 (14%)
Query: 11  YEVGRTIGEG--TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG+G      V  A+ + TGE V ++ +       + MV  ++ E+ + K+  H
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNH 85
Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCH 126
           PNIV       +  +++++  F+  G   D I       + E       Q ++ A+ + H
Sbjct: 86  PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH 145
Query: 127 SKGVYHRDLKPENLLLDSYG---------NLKVSDFG-----LSALPQQGVELLHTTCGT 172
             G  HR +K  ++L+   G         NL +   G     +   P+  V++L      
Sbjct: 146 HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVL------ 199
Query: 173 PNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT---LYKKINAA 225
             +++PEVL    +GYD + +D++S G+    L  G++PF   D+P    L +K+N  
Sbjct: 200 -PWLSPEVLQQNLQGYD-AKSDIYSVGITACELANGHVPF--KDMPATQMLLEKLNGT 253

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 70  NIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           NI++L + +    S+T   ++ E++   +   K ++Q  L + D R Y  +L+ A+ +CH
Sbjct: 94  NIIKLIDTVKDPVSKTPA-LVFEYINNTDF--KQLYQ-ILTDFDIRFYMYELLKALDYCH 149
Query: 127 SKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           SKG+ HRD+KP N+++D     L++ D+GL+       E  +    +  +  PE+L +  
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE-YNVRVASRYFKGPELLVDYQ 208
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
               + D+WS G +L  ++    PF
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPF 233

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 9/145 (6%)
Query: 70  NIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           NI++L + +    S+T   ++ E++   +   K ++Q  L + D R Y  +L+ A+ +CH
Sbjct: 99  NIIKLIDTVKDPVSKTPA-LVFEYINNTDF--KQLYQ-ILTDFDIRFYMYELLKALDYCH 154
Query: 127 SKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           SKG+ HRD+KP N+++D     L++ D+GL+       E  +    +  +  PE+L +  
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQE-YNVRVASRYFKGPELLVDYQ 213
Query: 186 YDGSAADVWSCGVILFVLMAGYLPF 210
               + D+WS G +L  ++    PF
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPF 238

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 61.2 bits (147), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 28/208 (13%)
Query: 15  RTIGEGTFAKVRFAQNRET--GES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 80
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL------SALPQQGVELLHTTCGTP 173
           D +A+ ++K   HRDL   N ++     +K+ DFG+      +A  ++G + L       
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPV---- 196
Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILF 201
            ++APE L + G   +++D+WS GV+L+
Sbjct: 197 RWMAPESLKD-GVFTTSSDMWSFGVVLW 223

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVRHPNIV 72
           + +G G F  V        GES+ + V  K    K   +    +   +  +  + H +IV
Sbjct: 37  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           RL   L   + + ++ +++  G L D +  H+G L       +  Q+   + +    G+ 
Sbjct: 97  RLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGS 189
           HR+L   N+LL S   ++V+DFG++  LP    +LL++   TP  ++A E +    Y   
Sbjct: 156 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT-H 214
Query: 190 AADVWSCGVILFVLMA-GYLPFGE---TDLPTLYKK 221
            +DVWS GV ++ LM  G  P+      ++P L +K
Sbjct: 215 QSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK 250

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRET--GES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 80
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGVELLHTTCGT 172
           D +A+ ++K   HRDL   N ++     +K+ DFG++          + G  LL      
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV---- 196
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 197 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 223

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRET--GES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 80
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGVELLHTTCGT 172
           D +A+ ++K   HRDL   N ++     +K+ DFG++          + G  LL      
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV---- 196
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 197 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 223

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVRHPNIV 72
           + +G G F  V        GES+ + V  K    K   +    +   +  +  + H +IV
Sbjct: 19  KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           RL   L   + + ++ +++  G L D +  H+G L       +  Q+   + +    G+ 
Sbjct: 79  RLLG-LCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 132 HRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGS 189
           HR+L   N+LL S   ++V+DFG++  LP    +LL++   TP  ++A E +    Y   
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYT-H 196
Query: 190 AADVWSCGVILFVLMA-GYLPFGE---TDLPTLYKK 221
            +DVWS GV ++ LM  G  P+      ++P L +K
Sbjct: 197 QSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEK 232

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRE--TGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 20  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 77
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 78  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGVELLHTTCGT 172
           D +A+ ++K   HRDL   N ++     +K+ DFG++          + G  LL      
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPV---- 193
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 194 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 220

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV----R 67
           + G+T+G G F KV  A     G+  A+  +A   +      D+ +  +S +KI+    +
Sbjct: 41  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ---------GRLLE-NDCRRYFQQ 117
           H NIV L         V +I E+   G+L + +  +         GR LE  D   +  Q
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NY 175
           +   +A   SK   HRD+   N+LL +    K+ DFGL+  +      ++      P  +
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 220
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
           +APE + +  Y    +DVWS G++L+ + + G  P+
Sbjct: 221 MAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPY 255

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRE--TGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 22  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 79
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 80  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLHTTCGT 172
           D +A+ ++K   HRDL   N ++     +K+ DFG++          + G  LL      
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---- 195
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 196 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 222

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 18/216 (8%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV----R 67
           + G+T+G G F KV  A     G+  A+  +A   +      D+ +  +S +KI+    +
Sbjct: 49  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ---------GRLLE-NDCRRYFQQ 117
           H NIV L         V +I E+   G+L + +  +         GR LE  D   +  Q
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NY 175
           +   +A   SK   HRD+   N+LL +    K+ DFGL+  +      ++      P  +
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW 228
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPF 210
           +APE + +  Y    +DVWS G++L+ + + G  P+
Sbjct: 229 MAPESIFDCVYT-VQSDVWSYGILLWEIFSLGLNPY 263

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 2   KKQTRRVAKYEVGRT--IGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQ 55
           + Q R + + E+ R   +G G F  V        GE+V    A+K+L ++T  K  +  +
Sbjct: 6   QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--E 63
Query: 56  IKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ------GRLLEN 109
              E  IM  + HP++VRL  V  S T + ++ + +  G L +  VH+       +LL N
Sbjct: 64  FMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLE-YVHEHKDNIGSQLLLN 121
Query: 110 DCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT 169
            C     Q+   + +   + + HRDL   N+L+ S  ++K++DFGL+ L  +G E  +  
Sbjct: 122 WC----VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL-LEGDEKEYNA 176
Query: 170 CGTP---NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA 205
            G      ++A E +  R +    +DVWS GV ++ LM 
Sbjct: 177 DGGKMPIKWMALECIHYRKFT-HQSDVWSYGVTIWELMT 214

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 9   AKYEVGRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
            +YEV   I  G    +  A +R   G  V +K L  S   + + +   +R+   +  V 
Sbjct: 80  GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQF--LAEVV 137
Query: 68  HPNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           HP+IV++   +    +      YI++E+V GG+   +   Q +L   +   Y  +++ A+
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKRSKGQ-KLPVAEAIAYLLEILPAL 195
Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           ++ HS G+ + DLKPEN++L +   LK+ D G  +     +       GTP + APE++ 
Sbjct: 196 SYLHSIGLVYNDLKPENIML-TEEQLKLIDLGAVSR----INSFGYLYGTPGFQAPEIV- 249
Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK-INAAEFSCPFWFSTGATS-L 240
            R     A D+++ G  L  L          DLPT   + ++      P   +  +   L
Sbjct: 250 -RTGPTVATDIYTVGRTLAALT--------LDLPTRNGRYVDGLPEDDPVLKTYDSYGRL 300
Query: 241 IHKILDPNPKTR 252
           + + +DP+P+ R
Sbjct: 301 LRRAIDPDPRQR 312

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRET--GES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 80
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLHTTCGT 172
           D +A+ ++K   HRDL   N ++     +K+ DFG++          + G  LL      
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---- 196
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 197 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 223

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 107/219 (48%), Gaps = 25/219 (11%)
Query: 2   KKQTRRVAKYEVGRT--IGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQ 55
           + Q R + + E+ R   +G G F  V        GE+V    A+K+L ++T  K  +  +
Sbjct: 29  QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--E 86
Query: 56  IKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ------GRLLEN 109
              E  IM  + HP++VRL  V  S T + ++ + +  G L +  VH+       +LL N
Sbjct: 87  FMDEALIMASMDHPHLVRLLGVCLSPT-IQLVTQLMPHGCLLE-YVHEHKDNIGSQLLLN 144
Query: 110 DCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT 169
            C     Q+   + +   + + HRDL   N+L+ S  ++K++DFGL+ L  +G E  +  
Sbjct: 145 WC----VQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL-LEGDEKEYNA 199
Query: 170 CGTP---NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA 205
            G      ++A E +  R +    +DVWS GV ++ LM 
Sbjct: 200 DGGKMPIKWMALECIHYRKFT-HQSDVWSYGVTIWELMT 237

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 30/229 (13%)
Query: 17  IGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIV 72
           IGEG F +V  A+ ++ G   ++   ++   ++   HR       E+ ++ K+  HPNI+
Sbjct: 30  IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR---DFAGELEVLCKLGHHPNII 86
Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND----------CRRYFQQLIDAV 122
            L      R  +Y+ +E+   G L D  + + R+LE D               QQL+   
Sbjct: 87  NLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 123 A-------HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-N 174
           A       +   K   HR+L   N+L+      K++DFGLS    Q V +  T    P  
Sbjct: 146 ADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVR 203
Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI 222
           ++A E L+   Y  + +DVWS GV+L+ +++ G  P+       LY+K+
Sbjct: 204 WMAIESLNYSVYT-TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 39/234 (16%)
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR--------RYFQQLI 119
           HPN++R +    +   +YI LE          +V    + + + +           +Q+ 
Sbjct: 68  HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYG-----------NLK--VSDFGLSALPQQGVELL 166
             VAH HS  + HRDLKP+N+L+ +             NL+  +SDFGL      G    
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 167 HTT----CGTPNYVAPEVLSNRGYDGS------AADVWSCG-VILFVLMAGYLPFGET-- 213
            T      GT  + APE+L       +      + D++S G V  ++L  G  PFG+   
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 214 -DLPTLYKKINAAEFSCPFWFS--TGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            +   +    +  E  C    S    AT LI +++D +P  R     + +HP F
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 22  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 79
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 80  VCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 199 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 230

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 39/234 (16%)
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR--------RYFQQLI 119
           HPN++R +    +   +YI LE          +V    + + + +           +Q+ 
Sbjct: 68  HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYG-----------NLK--VSDFGLSALPQQGVEL- 165
             VAH HS  + HRDLKP+N+L+ +             NL+  +SDFGL      G    
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 166 ---LHTTCGTPNYVAPEVLSNRGYDGS------AADVWSCG-VILFVLMAGYLPFGET-- 213
              L+   GT  + APE+L       +      + D++S G V  ++L  G  PFG+   
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245
Query: 214 -DLPTLYKKINAAEFSCPFWFS--TGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            +   +    +  E  C    S    AT LI +++D +P  R     + +HP F
Sbjct: 246 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL---KHRMVDQIKREISIMKIVRHP 69
           +G+ +GEG F  V    N +  +  ++KV  K+  L     R +++   E + MK   HP
Sbjct: 38  LGKILGEGEFGSV-MEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 70  NIVRLHEVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID---- 120
           N++RL  V    +     K  +IL F+  G+L   +++  RL         Q L+     
Sbjct: 97  NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS-RLETGPKHIPLQTLLKFMVD 155
Query: 121 ---AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP--NY 175
               + +  ++   HRDL   N +L     + V+DFGLS     G              +
Sbjct: 156 IALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW 215
Query: 176 VAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
           +A E L++R Y  S +DVW+ GV ++ +   G  P+
Sbjct: 216 IAIESLADRVYT-SKSDVWAFGVTMWEIATRGMTPY 250

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV--RHPNIVR- 73
           +G+G + +V   +    GE+VA+K+ +       R      RE  +   V  RH NI+  
Sbjct: 16  VGKGRYGEV--WRGSWQGENVAVKIFSS------RDEKSWFRETELYNTVMLRHENILGF 67
Query: 74  LHEVLASR---TKVYIILEFVTGGELFDKIVHQGRLLEN-DCRRYFQQLIDAVAHCH--- 126
           +   + SR   T++++I  +   G L+D +  Q   L+   C R    +   +AH H   
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 127 -----SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HTTCGTPNYVA 177
                   + HRDLK +N+L+   G   ++D GL+ +  Q    L    +   GT  Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 178 PEVLSNR----GYDG-SAADVWSCGVILF 201
           PEVL        +D     D+W+ G++L+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLW 214

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV--RHPNIVR- 73
           +G+G + +V   +    GE+VA+K+ +       R      RE  +   V  RH NI+  
Sbjct: 16  VGKGRYGEV--WRGSWQGENVAVKIFSS------RDEKSWFRETELYNTVMLRHENILGF 67
Query: 74  LHEVLASR---TKVYIILEFVTGGELFDKIVHQGRLLEN-DCRRYFQQLIDAVAHCH--- 126
           +   + SR   T++++I  +   G L+D +  Q   L+   C R    +   +AH H   
Sbjct: 68  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 127 -----SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HTTCGTPNYVA 177
                   + HRDLK +N+L+   G   ++D GL+ +  Q    L    +   GT  Y+A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 178 PEVLSNR----GYDG-SAADVWSCGVILF 201
           PEVL        +D     D+W+ G++L+
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLW 214

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 80
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 81  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 200 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 231

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 82
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 83  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 202 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 233

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 22  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 79
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 80  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 198
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 199 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 230

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 78
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 79  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 198 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 229

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 81
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 82  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 201 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 232

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 34/209 (16%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV--RHPNIVR- 73
           +G+G + +V   +    GE+VA+K+ +       R      RE  +   V  RH NI+  
Sbjct: 45  VGKGRYGEV--WRGSWQGENVAVKIFSS------RDEKSWFRETELYNTVMLRHENILGF 96
Query: 74  LHEVLASR---TKVYIILEFVTGGELFDKIVHQGRLLEN-DCRRYFQQLIDAVAHCH--- 126
           +   + SR   T++++I  +   G L+D +  Q   L+   C R    +   +AH H   
Sbjct: 97  IASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 127 -----SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HTTCGTPNYVA 177
                   + HRDLK +N+L+   G   ++D GL+ +  Q    L    +   GT  Y+A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 178 PEVLSNR----GYDG-SAADVWSCGVILF 201
           PEVL        +D     D+W+ G++L+
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLW 243

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRET--GES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 23  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 80
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 81  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLHTTCGT 172
           D +A+ ++K   HR+L   N ++     +K+ DFG++          + G  LL      
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---- 196
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 197 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 223

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 30/209 (14%)
Query: 15  RTIGEGTFAKVRFAQNRET--GES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           R +G+G+F  V     R+   GE+   VA+K + +S  L+ R+  +   E S+MK     
Sbjct: 24  RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI--EFLNEASVMKGFTCH 81
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR---YFQQLI------- 119
           ++VRL  V++      +++E +  G+L   +       EN+  R     Q++I       
Sbjct: 82  HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLHTTCGT 172
           D +A+ ++K   HR+L   N ++     +K+ DFG++          + G  LL      
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV---- 197
Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             ++APE L + G   +++D+WS GV+L+
Sbjct: 198 -RWMAPESLKD-GVFTTSSDMWSFGVVLW 224

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 78
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 79  VCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 198 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 229

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 18  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 75
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+ + + +   + 
Sbjct: 76  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 194
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 195 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 226

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 37  VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGEL 96
           VA+K+ +++         + +RE      ++ P++V +H+      ++Y+    + G +L
Sbjct: 62  VALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDL 121
Query: 97  FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL- 155
              +  QG L         +Q+  A+   H+ G  HRD+KPEN+L+ +     + DFG+ 
Sbjct: 122 AAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIA 181
Query: 156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL 215
           SA   + +  L  T GT  Y APE  S   +    AD+++   +L+  + G  P+    L
Sbjct: 182 SATTDEKLTQLGNTVGTLYYXAPERFSE-SHATYRADIYALTCVLYECLTGSPPYQGDQL 240
Query: 216 PTLYKKINAA 225
                 IN A
Sbjct: 241 SVXGAHINQA 250

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFT-T 215
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 216 KSDVWSFGVLLWELMTRGAPPYPDVN 241

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 217
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 218 KSDVWSFGVLLWELMTRGAPPYPDVN 243

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 39  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 99  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 158
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 159 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 217
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 218 KSDVWSFGVLLWELMTRGAPPYPDVN 243

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 155
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 214
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 215 KSDVWSFGVLLWELMTRGAPPYPDVN 240

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 216
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVN 242

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 78
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 79  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 198 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 229

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 157
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 216
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVN 242

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 21  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 78
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 79  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 197
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 198 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 229

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 81
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 82  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 201 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 232

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 31  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 88
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 89  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 207
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 208 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 239

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 80
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 81  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 200 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 231

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 46  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 103
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 104 VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 222
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 223 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 254

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 81
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 82  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 201 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 232

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 43  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 162
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 163 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 221
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 222 KSDVWSFGVLLWELMTRGAPPYPDVN 247

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 38/244 (15%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY +GR IG G+F  +    N  +GE VA+K+    T  KH    Q+  E    K+++  
Sbjct: 10  KYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKT--KH---PQLHIESKFYKMMQGG 64
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ---------QLID 120
             +   +   +     +++  + G  L D        L N C R F          Q+I 
Sbjct: 65  VGIPSIKWCGAEGDYNVMVMELLGPSLED--------LFNFCSRKFSLKTVLLLADQMIS 116
Query: 121 AVAHCHSKGVYHRDLKPENLL--LDSYGNL-KVSDFGLSALPQQGVELLH-------TTC 170
            + + HSK   HRD+KP+N L  L   GNL  + DFGL+   +      H          
Sbjct: 117 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 171 GTPNYVAPEVLSNRGYDGSAA-DVWSCGVILFVLMAGYLPFGETDLPT---LYKKINAAE 226
           GT  Y +  + ++ G + S   D+ S G +L     G LP+      T    Y++I+  +
Sbjct: 177 GTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234
Query: 227 FSCP 230
            S P
Sbjct: 235 MSTP 238

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 24  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 81
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 82  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 200
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 201 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 232

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 27  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 84
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 85  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 203
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 204 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 235

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 15  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 72
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 73  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 191
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 192 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 223

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 28  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 85
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 86  VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 205 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 236

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 216
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVN 242

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 97  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK   HR
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHR 216
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +  + +H   G      ++A E L  + +  +
Sbjct: 217 DLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT-T 275
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 276 KSDVWSFGVLLWELMTRGAPPYPDVN 301

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 13  VGRTIGEGTFAKVRFA-----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +G+T+GEG F KV  A     + R    +VA+K+L K       + D +  E +++K V 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQVN 84
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELF-----DKIVHQGRLLE-------------- 108
           HP++++L+   +    + +I+E+   G L       + V  G L                
Sbjct: 85  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 109 -----NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQG 162
                 D   +  Q+   + +     + HRDL   N+L+     +K+SDFGLS  + ++ 
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 163 VELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILF 201
             +  +    P  ++A E L +  Y  + +DVWS GV+L+
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLW 243

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G F KV +      G  VA+K L +       +  Q + E+ ++ +  H N++RL  
Sbjct: 46  LGRGGFGKV-YKGRLADGTLVAVKRLKEERXQGGEL--QFQTEVEMISMAVHRNLLRLRG 102
Query: 77  VLASRTKVYIILEFVTGGE----LFDKIVHQGRLLENDCRRYFQQLIDAVA----HCHSK 128
              + T+  ++  ++  G     L ++   Q  L     +R        +A    HC  K
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPK 162
Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ-QGVELLHTTCGTPNYVAPEVLSNRGYD 187
            + HRD+K  N+LLD      V DFGL+ L   +   +     GT  ++APE LS  G  
Sbjct: 163 -IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLST-GKS 220
Query: 188 GSAADVWSCGVILFVLMAGYLPF 210
               DV+  GV+L  L+ G   F
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAF 243

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 36  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 96  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 155
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 156 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 214
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 215 KSDVWSFGVLLWELMTRGAPPYPDVN 240

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 33  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 93  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 152
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 153 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 211
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 212 KSDVWSFGVLLWELMTRGAPPYPDVN 237

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 43/231 (18%)
Query: 13  VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI- 71
           V R +G+GTF +V   Q+ +  +  A+KV+    I K+    +I  E  I+K +++ +I 
Sbjct: 39  VIRKMGDGTFGRVLLCQHIDNKKYYAVKVV--RNIKKYTRSAKI--EADILKKIQNDDIN 94
Query: 72  ----VRLHEVLASRTKVYIILEFVTGGELFDKIV---HQGRLLENDCRRYFQQLIDAVAH 124
               V+ H        + +I E + G  L++ I    + G  +E D + Y  +++ A+ +
Sbjct: 95  NNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIE-DIKLYCIEILKALNY 152
Query: 125 CHSKGVYHRDLKPENLLLDS-------------------------YGNLKVSDFGLSALP 159
                + H DLKPEN+LLD                             +K+ DFG +   
Sbjct: 153 LRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFK 212
Query: 160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
               +   +   T  Y APEV+ N G+D S +D+WS G +L  L  G L F
Sbjct: 213 S---DYHGSIINTRQYRAPEVILNLGWDVS-SDMWSFGCVLAELYTGSLLF 259

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 37  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 97  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 156
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 157 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 215
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 216 KSDVWSFGVLLWELMTRGAPPYPDVN 241

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 57  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 176
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 177 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 235
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 236 KSDVWSFGVLLWELMTRGAPPYPDVN 261

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 38  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 98  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 157
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 158 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 216
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 217 KSDVWSFGVLLWELMTRGAPPYPDVN 242

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 30  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 90  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 149
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 150 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 208
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 209 KSDVWSFGVLLWELMTRGAPPYPDVN 234

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 35  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 95  GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 154
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 155 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 213
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 214 KSDVWSFGVLLWELMTRGAPPYPDVN 239

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 9/206 (4%)
Query: 17  IGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLH 75
           IG G F  V      +  G+ +   V + + I     V Q   E  IMK   HPN++ L 
Sbjct: 56  IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 76  EV-LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHR 133
            + L S     ++L ++  G+L + I ++       D   +  Q+   + +  SK   HR
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHR 175
Query: 134 DLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NYVAPEVLSNRGYDGS 189
           DL   N +LD    +KV+DFGL+  +  +    +H   G      ++A E L  + +  +
Sbjct: 176 DLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFT-T 234
Query: 190 AADVWSCGVILFVLMA-GYLPFGETD 214
            +DVWS GV+L+ LM  G  P+ + +
Sbjct: 235 KSDVWSFGVLLWELMTRGAPPYPDVN 260

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES-VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           +YE+   +GEGTF KV    +   G+S VA+K++    + K+R  +  + EI+++K ++ 
Sbjct: 20  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKII--RNVGKYR--EAARLEINVLKKIKE 75
Query: 69  PN------IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY-------- 114
            +       V + +       + I  E + G   F+       L EN+ + Y        
Sbjct: 76  KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE------FLKENNFQPYPLPHVRHM 128
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLL-----------------DSYGN--LKVSDFGL 155
             QL  A+   H   + H DLKPEN+L                   S  N  ++V+DFG 
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 156 SALPQQGVELLHTT-CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           +    +     HTT   T +Y  PEV+   G+     DVWS G ILF    G+  F
Sbjct: 189 ATFDHEH----HTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLF 239

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 34/220 (15%)
Query: 13  VGRTIGEGTFAKVRFA-----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +G+T+GEG F KV  A     + R    +VA+K+L K       + D +  E +++K V 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQVN 84
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELF-----DKIVHQGRLLE-------------- 108
           HP++++L+   +    + +I+E+   G L       + V  G L                
Sbjct: 85  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 109 -----NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQG 162
                 D   +  Q+   + +     + HRDL   N+L+     +K+SDFGLS  + ++ 
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 163 VELLHTTCGTP-NYVAPEVLSNRGYDGSAADVWSCGVILF 201
             +  +    P  ++A E L +  Y  + +DVWS GV+L+
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLW 243

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES-VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           +YE+   +GEGTF KV    +   G+S VA+K++    + K+R   ++  EI+++K ++ 
Sbjct: 29  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKII--RNVGKYREAARL--EINVLKKIKE 84
Query: 69  PN------IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY-------- 114
            +       V + +       + I  E + G   F+       L EN+ + Y        
Sbjct: 85  KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE------FLKENNFQPYPLPHVRHM 137
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLL-----------------DSYGN--LKVSDFGL 155
             QL  A+   H   + H DLKPEN+L                   S  N  ++V+DFG 
Sbjct: 138 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 197
Query: 156 SALPQQGVELLHTT-CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           +    +     HTT   T +Y  PEV+   G+     DVWS G ILF    G+  F
Sbjct: 198 ATFDHEH----HTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLF 248

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 102/236 (43%), Gaps = 51/236 (21%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES-VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           +YE+   +GEGTF KV    +   G+S VA+K++    + K+R  +  + EI+++K ++ 
Sbjct: 52  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKII--RNVGKYR--EAARLEINVLKKIKE 107
Query: 69  PN------IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY-------- 114
            +       V + +       + I  E + G   F+       L EN+ + Y        
Sbjct: 108 KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFE------FLKENNFQPYPLPHVRHM 160
Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLL-----------------DSYGN--LKVSDFGL 155
             QL  A+   H   + H DLKPEN+L                   S  N  ++V+DFG 
Sbjct: 161 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 156 SALPQQGVELLHTT-CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           +    +     HTT   T +Y  PEV+   G+     DVWS G ILF    G+  F
Sbjct: 221 ATFDHEH----HTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLF 271

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 13  VGRTIGEGTFAKVRFA-----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           +G+T+GEG F KV  A     + R    +VA+K+L K       + D +  E +++K V 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLS-EFNVLKQVN 84
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELF-----DKIVHQGRLLE-------------- 108
           HP++++L+   +    + +I+E+   G L       + V  G L                
Sbjct: 85  HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDE 144
Query: 109 -----NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV 163
                 D   +  Q+   + +     + HRDL   N+L+     +K+SDFGLS    +  
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 164 ELLHTTCG--TPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
             +  + G     ++A E L +  Y  + +DVWS GV+L+
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLW 243

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 20  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 77
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 78  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 198 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 225

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 25  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 82
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 83  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFG + L     +  H   G  P  ++A E + +R Y 
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 201
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 202 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 233

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +  G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 28  KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 85
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 86  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 204
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 205 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 236

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 11  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 68
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 69  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 128
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------ALPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 129 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 189 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 216

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 80
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 81  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFG + L     +  H   G  P  ++A E + +R Y 
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 200 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 231

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V    A+K L ++T  K     +I  E  +M  V +P+
Sbjct: 23  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNPH 80
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I++ +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 81  VCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFG + L     +  H   G  P  ++A E + +R Y 
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 199
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 200 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 231

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 29/218 (13%)
Query: 6   RRVAK-YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           R +AK  ++ + IG+G + +V   + R  GE VA+KV   +         +I + +    
Sbjct: 33  RTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEEASWFRETEIYQTV---- 86
Query: 65  IVRHPNIVRLHEV----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           ++RH NI+           S T++Y+I ++   G L+D  +    L      +     + 
Sbjct: 87  LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSVS 145
Query: 121 AVAHCHSK--------GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HT 168
            + H H++         + HRDLK +N+L+   G   ++D GL+         +    +T
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 169 TCGTPNYVAPEVLS---NRGYDGS--AADVWSCGVILF 201
             GT  Y+ PEVL    NR +  S   AD++S G+IL+
Sbjct: 206 RVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKV----LAKSTILKHRMVDQIKREISIMKIVRHPN 70
           + +G G F  V        GE V + V    L ++T  K     +I  E  +M  V +P+
Sbjct: 55  KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKAN--KEILDEAYVMASVDNPH 112
Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           + RL  +  + T V +I + +  G L D +  H+  +       +  Q+   + +   + 
Sbjct: 113 VCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 171
Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGYD 187
           + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y 
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT 231
Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS 228
              +DVWS GV ++ LM     FG       Y  I A+E S
Sbjct: 232 -HQSDVWSYGVTVWELMT----FGSKP----YDGIPASEIS 263

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 26  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 83
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 84  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 143
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 204 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 231

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 19  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 76
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 77  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 197 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 224

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 13  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 70
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 71  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 191 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 218

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 19  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 76
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 77  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 197 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 224

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 17  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 74
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 75  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 134
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 135 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 195 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 222

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 38/244 (15%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +GR IG G+F  +    +   GE VA+K+    T  KH    Q+  E  I K+++  
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KH---PQLHIESKIYKMMQGG 64
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ---------QLID 120
             +       +     +++  + G  L D        L N C R F          Q+I 
Sbjct: 65  VGIPTIRWCGAEGDYNVMVMELLGPSLED--------LFNFCSRKFSLKTVLLLADQMIS 116
Query: 121 AVAHCHSKGVYHRDLKPENLL--LDSYGNL-KVSDFGLSALPQQGVELLH-------TTC 170
            + + HSK   HRD+KP+N L  L   GNL  + DFGL+   +      H          
Sbjct: 117 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 176
Query: 171 GTPNYVAPEVLSNRGYDGSAA-DVWSCGVILFVLMAGYLPFGETDLPT---LYKKINAAE 226
           GT  Y +  + ++ G + S   D+ S G +L     G LP+      T    Y++I+  +
Sbjct: 177 GTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 234
Query: 227 FSCP 230
            S P
Sbjct: 235 MSTP 238

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 38/244 (15%)
Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +GR IG G+F  +    +   GE VA+K+    T  KH    Q+  E  I K+++  
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KH---PQLHIESKIYKMMQGG 62
Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ---------QLID 120
             +       +     +++  + G  L D        L N C R F          Q+I 
Sbjct: 63  VGIPTIRWCGAEGDYNVMVMELLGPSLED--------LFNFCSRKFSLKTVLLLADQMIS 114
Query: 121 AVAHCHSKGVYHRDLKPENLL--LDSYGNL-KVSDFGLSALPQQGVELLH-------TTC 170
            + + HSK   HRD+KP+N L  L   GNL  + DFGL+   +      H          
Sbjct: 115 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT 174
Query: 171 GTPNYVAPEVLSNRGYDGSAA-DVWSCGVILFVLMAGYLPFGETDLPT---LYKKINAAE 226
           GT  Y +  + ++ G + S   D+ S G +L     G LP+      T    Y++I+  +
Sbjct: 175 GTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 232
Query: 227 FSCP 230
            S P
Sbjct: 233 MSTP 236

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 23/216 (10%)
Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV----R 67
           + G+T+G G F KV  A     G+  A+  +A   +      D+ +  +S +KI+    +
Sbjct: 49  QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVH----------------QGRLLENDC 111
           H NIV L         V +I E+   G+L + +                  + +L   D 
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 112 RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC 170
             +  Q+   +A   SK   HRD+   N+LL +    K+ DFGL+  +      ++    
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 228
Query: 171 GTP-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA 205
             P  ++APE + +  Y    +DVWS G++L+ + +
Sbjct: 229 RLPVKWMAPESIFDCVYT-VQSDVWSYGILLWEIFS 263

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 99/214 (46%), Gaps = 30/214 (14%)
Query: 10  KYEVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R+  +   E S+MK
Sbjct: 20  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMK 77
Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND-------CRRYFQ- 116
                ++VRL  V++      +I+E +T G+L   +      +EN+         +  Q 
Sbjct: 78  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 117 --QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-------LPQQGVELLH 167
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++          + G  LL 
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF 201
                  +++PE L + G   + +DVWS GV+L+
Sbjct: 198 V-----RWMSPESLKD-GVFTTYSDVWSFGVVLW 225
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	379
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-170
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-169
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-167
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-167
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-167
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-166
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-165
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	1e-165
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-165
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-165
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-163
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-159
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	1e-157
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-156
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-154
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	1e-150
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-145
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-144
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-141
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-113
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-110
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-110
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-108
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-108
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-107
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-106
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-106
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-106
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-105
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-105
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-104
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-103
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-102
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-102
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-102
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-102
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-101
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-100
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-100
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-100
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-99
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-99
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	5e-99
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-99
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-98
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-98
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	6e-98
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-97
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	7e-97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-96
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-95
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	9e-95
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	6e-94
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	9e-93
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-92
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	7e-89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-87
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-85
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-83
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-83
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-83
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-83
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-81
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-81
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-79
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-77
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-77
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-77
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-77
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	7e-77
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-75
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-75
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-74
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-74
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	3e-74
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-74
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-73
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-73
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-73
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-72
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-72
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	7e-72
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-71
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	1e-71
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-71
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	3e-71
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-69
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-68
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-68
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-67
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	8e-67
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	1e-58
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-55
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-54
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	4e-54
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-54
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-53
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-53
3o0g_A	292	Cell division protein kinase 5; kinase activator c	6e-52
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-50
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-50
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	7e-50
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-49
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-49
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-49
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-49
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-48
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-47
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	8e-47
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-46
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-45
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-45
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-44
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-44
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-44
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-43
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-42
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-42
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-41
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-41
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-41
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	3e-41
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-41
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-41
2dyl_A	318	Dual specificity mitogen-activated protein kinase	8e-41
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-41
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-40
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-39
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-39
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-39
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-38
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-38
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-38
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	9e-38
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-37
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-37
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-37
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-37
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-37
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-37
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-37
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-36
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-36
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-36
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	8e-36
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-36
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	4e-35
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	6e-35
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-34
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	1e-34
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-34
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-34
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-34
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-34
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-33
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	2e-33
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-33
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	8e-33
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-32
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-31
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-29
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-29
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	7e-29
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-28
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-28
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-28
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-28
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-28
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	8e-28
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	8e-28
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-27
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-27
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-26
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	2e-26
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-26
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	6e-26
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-26
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	7e-26
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	8e-26
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-25
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-25
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-25
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-25
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-25
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	3e-25
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-25
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-25
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	8e-25
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-24
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-24
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-24
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-24
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-24
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-24
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-23
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-23
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-23
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	6e-23
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	8e-23
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	9e-23
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-22
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-22
2ehb_D	143	CBL-interacting serine/threonine-protein kinase 2;	2e-21
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	4e-21
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-20
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	6e-20
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	7e-20
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-19
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-18
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-18
2zfd_B	123	Putative uncharacterized protein T20L15_90; calciu	6e-18
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-18
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-17
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-17
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-17
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	2e-17
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-17
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-17
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-17
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	5e-17
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-17
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	8e-17
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	1e-16
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-16
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-16
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-16
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	8e-15
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-14
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-14
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-13
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-13
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	6e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-08
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-07
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	4e-05
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	9e-05

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  476 bits (1227), Expect = e-170
 Identities = 119/274 (43%), Positives = 179/274 (65%), Gaps = 1/274 (0%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
                ++  Y +G T+G GTF KV+  +++ TG  VA+K+L +  I    +V +IKREI 
Sbjct: 4   HDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQ 63

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
            +K+ RHP+I++L++V+++ T  ++++E+V+GGELFD I   GR+ E + RR FQQ++ A
Sbjct: 64  NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           V +CH   V HRDLKPEN+LLD++ N K++DFGLS +   G E L T+CG+PNY APEV+
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVI 182

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           S R Y G   D+WSCGVIL+ L+ G LPF +  +PTL+KKI    F  P + +    +L+
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLL 242

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
             +L  +P  R  I+ IR+H WF+++       E
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFPE 276

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  475 bits (1225), Expect = e-167
 Identities = 117/283 (41%), Positives = 180/283 (63%), Gaps = 1/283 (0%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
                ++  Y +G T+G GTF KV+  ++  TG  VA+K+L +  I    +V +I+REI 
Sbjct: 9   HDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQ 68

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
            +K+ RHP+I++L++V+++ + +++++E+V+GGELFD I   GRL E + RR FQQ++  
Sbjct: 69  NLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSG 128

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           V +CH   V HRDLKPEN+LLD++ N K++DFGLS +   G E L T+CG+PNY APEV+
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-EFLRTSCGSPNYAAPEVI 187

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           S R Y G   D+WS GVIL+ L+ G LPF +  +PTL+KKI    F  P + +    SL+
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLL 247

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDV 284
             +L  +P  R  I+ IR+H WF+++       E+   +   +
Sbjct: 248 KHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMI 290

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  469 bits (1209), Expect = e-167
 Identities = 121/293 (41%), Positives = 193/293 (65%), Gaps = 3/293 (1%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M    R +  Y +  T+GEG+F KV+ A + +T + VA+K +++  + K  M  +++REI
Sbjct: 1   MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
           S +K++RHP+I++L++V+ + T + +++E+  GGELFD IV + R+ E++ RR+FQQ+I 
Sbjct: 61  SYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIIC 119

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+ +CH   + HRDLKPENLLLD   N+K++DFGLS +   G   L T+CG+PNY APEV
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-NFLKTSCGSPNYAAPEV 178

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           ++ + Y G   DVWSCG++L+V++ G LPF +  +P L+KK+N+  +  P + S GA SL
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSL 238

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNY-NPVKCSEEEEVNLDDVHAVFDDIE 292
           I +++  +P  RI I+ IR+ PWF  N  + ++  EE + +  D   V    E
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGE 291

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  466 bits (1201), Expect = e-167
 Identities = 101/269 (37%), Positives = 151/269 (56%), Gaps = 7/269 (2%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
              V  +++ +T+GEG + +V+ A NR T E+VA+K++     +     + IK+EI I K
Sbjct: 3   VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINK 60

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+   +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKNY 268
           L+HKIL  NP  RI I  I+K  W+ K  
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPL 269

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  465 bits (1198), Expect = e-166
 Identities = 90/268 (33%), Positives = 135/268 (50%), Gaps = 1/268 (0%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
            R   +Y  GR +G+G FAK     + +T E  A K++ KS +LK    +++  EISI +
Sbjct: 11  PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHR 70

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + H ++V  H        V+++LE      L +    +  L E + R Y +Q++    +
Sbjct: 71  SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQY 130

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            H   V HRDLK  NL L+    +K+ DFGL+   +   E     CGTPNY+APEVLS +
Sbjct: 131 LHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK 190

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
           G+     DVWS G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI K+
Sbjct: 191 GHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKM 249

Query: 245 LDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
           L  +P  R  I  +    +F   Y P +
Sbjct: 250 LQTDPTARPTINELLNDEFFTSGYIPAR 277

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  465 bits (1199), Expect = e-165
 Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 1/270 (0%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
              R   +Y  GR +G+G FAK     + +T E  A K++ KS +LK    +++  EISI
Sbjct: 35  VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISI 94

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
            + + H ++V  H        V+++LE      L +    +  L E + R Y +Q++   
Sbjct: 95  HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
            + H   V HRDLK  NL L+    +K+ DFGL+   +   E     CGTPNY+APEVLS
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
            +G+     DVWS G I++ L+ G  PF  + L   Y +I   E+S P   +  A SLI 
Sbjct: 215 KKGHSF-EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQ 273

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
           K+L  +P  R  I  +    +F   Y P +
Sbjct: 274 KMLQTDPTARPTINELLNDEFFTSGYIPAR 303

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  464 bits (1197), Expect = e-165
 Identities = 103/292 (35%), Positives = 156/292 (53%), Gaps = 8/292 (2%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
              V  +++ +T+GEG + +V+ A NR T E+VA+K++     +     + IK+EI I K
Sbjct: 3   VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINK 60

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           ++ H N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V +
Sbjct: 61  MLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLS 182
            H  G+ HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L 
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFW--FSTGATS 239
            R +     DVWSCG++L  ++AG LP+   +D    Y      +     W    +   +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYNP-VKCSEEEEVNLDDVHAVFDD 290
           L+HKIL  NP  RI I  I+K  W+ K      K        + +  + F  
Sbjct: 241 LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSK 292

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  466 bits (1201), Expect = e-165
 Identities = 113/347 (32%), Positives = 171/347 (49%), Gaps = 19/347 (5%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
               +Y+  + IG G F   R  +++ T E VA+K + +       + + ++REI   + 
Sbjct: 17  HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA----IDENVQREIINHRS 72

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           +RHPNIVR  EV+ + T + II+E+ +GGEL+++I + GR  E++ R +FQQL+  V++C
Sbjct: 73  LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYC 132

Query: 126 HSKGVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           HS  + HRDLK EN LLD      LK+ DFG S           +T GTP Y+APEVL  
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTVGTPAYIAPEVLLR 191

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----INAAEFSCP--FWFSTGA 237
           + YDG  ADVWSCGV L+V++ G  PF + + P  Y+K    I + ++S P     S   
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP-VKCSEEEEVNLDDVHAVFDDIEDQYV 296
             LI +I   +P TRI I  I+ H WF KN    +           +       ++    
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQ 311

Query: 297 AEQSENKVGGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVS 343
                     P + N      ++  L+L    D      + +    S
Sbjct: 312 IISEATI---PAVRNRCLDDFMTDNLDLDDDMDDFDS--ESEIDIDS 353

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  462 bits (1192), Expect = e-165
 Identities = 88/305 (28%), Positives = 155/305 (50%), Gaps = 14/305 (4%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD-QIKREISIMK 64
           + + KY +G  +GEG++ KV+   + ET    A+K+L K  + +    +  +K+EI +++
Sbjct: 2   KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLR 61

Query: 65  IVRHPNIVRLHEVL--ASRTKVYIILEFVTGG--ELFDKIVHQGRLLENDCRRYFQQLID 120
            +RH N+++L +VL    + K+Y+++E+   G  E+ D +    R        YF QLID
Sbjct: 62  RLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYFCQLID 120

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAP 178
            + + HS+G+ H+D+KP NLLL + G LK+S  G++         +   T+ G+P +  P
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPP 180

Query: 179 EVLSN-RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGA 237
           E+ +    + G   D+WS GV L+ +  G  PF   ++  L++ I    ++ P       
Sbjct: 181 EIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPL 240

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVH-----AVFDDIE 292
           + L+  +L+  P  R  I  IR+H WFRK + P +       + D         V   +E
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWRSMTVVPYLE 300

Query: 293 DQYVA 297
           D + A
Sbjct: 301 DLHGA 305

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  457 bits (1178), Expect = e-163
 Identities = 87/271 (32%), Positives = 150/271 (55%), Gaps = 2/271 (0%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
            ++  ++VG  +G+G+FA V  A++  TG  VA+K++ K  + K  MV +++ E+ I   
Sbjct: 8   EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQ 67

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAH 124
           ++HP+I+ L+        VY++LE    GE+   + ++ +   EN+ R +  Q+I  + +
Sbjct: 68  LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
            HS G+ HRDL   NLLL    N+K++DFGL+   +   E  +T CGTPNY++PE+ +  
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
            + G  +DVWS G + + L+ G  PF    +     K+  A++  P + S  A  LIH++
Sbjct: 188 AH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL 246

Query: 245 LDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
           L  NP  R+ +  +  HP+  +N +     E
Sbjct: 247 LRRNPADRLSLSSVLDHPFMSRNSSTKSKDE 277

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  448 bits (1154), Expect = e-159
 Identities = 91/272 (33%), Positives = 152/272 (55%), Gaps = 3/272 (1%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M K+   +  +++GR +G+G F  V  A+ ++    +A+KVL KS + K  +  Q++REI
Sbjct: 6   MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREI 65

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            I   +RHPNI+R++     R ++Y++LEF   GEL+ ++   GR  E     + ++L D
Sbjct: 66  EIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELAD 125

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+ +CH + V HRD+KPENLL+   G LK++DFG S           T CGT +Y+ PE+
Sbjct: 126 ALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--LRRRTMCGTLDYLPPEM 183

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
           +  + +D    D+W  GV+ +  + G  PF        +++I   +   P + S G+  L
Sbjct: 184 IEGKTHDEK-VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL 242

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
           I K+L  +P  R+ ++G+ +HPW + N   V 
Sbjct: 243 ISKLLRYHPPQRLPLKGVMEHPWVKANSRRVL 274

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  441 bits (1137), Expect = e-157
 Identities = 98/280 (35%), Positives = 157/280 (56%), Gaps = 4/280 (1%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           KK+   +  +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ 
Sbjct: 2   KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I   +RHPNI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A
Sbjct: 62  IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           +++CHSK V HRD+KPENLLL S G LK++DFG S             CGT +Y+ PE++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTDLCGTLDYLPPEMI 179

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
             R +D    D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI
Sbjct: 180 EGRMHDEK-VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI 238

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYN-PVKCSEEEEVN 280
            ++L  NP  R  +  + +HPW   N + P  C  +E  +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITANSSKPSNCQNKESAS 278

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  440 bits (1133), Expect = e-156
 Identities = 91/294 (30%), Positives = 151/294 (51%), Gaps = 30/294 (10%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---------- 51
                ++ +Y +   IG+G++  V+ A N       AMKVL+K  +++            
Sbjct: 6   SGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRG 65

Query: 52  -------------MVDQIKREISIMKIVRHPNIVRLHEVL--ASRTKVYIILEFVTGGEL 96
                         ++Q+ +EI+I+K + HPN+V+L EVL   +   +Y++ E V  G +
Sbjct: 66  TRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV 125

Query: 97  FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS 156
            + +     L E+  R YFQ LI  + + H + + HRD+KP NLL+   G++K++DFG+S
Sbjct: 126 ME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184

Query: 157 ALPQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETD 214
              +    LL  T GTP ++APE LS   + + G A DVW+ GV L+  + G  PF +  
Sbjct: 185 NEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244

Query: 215 LPTLYKKINAAEFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
           +  L+ KI +     P     +     LI ++LD NP++RI +  I+ HPW  +
Sbjct: 245 IMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  435 bits (1122), Expect = e-154
 Identities = 112/291 (38%), Positives = 169/291 (58%), Gaps = 2/291 (0%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
              +   +  Y + +TIG+G FAKV+ A++  TG  VA+K++ K+ +     + ++ RE+
Sbjct: 7   CADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREV 65

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID 120
            IMKI+ HPNIV+L EV+ +   +Y+I+E+ +GGE+FD +V  GR+ E + R  F+Q++ 
Sbjct: 66  RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           AV +CH K + HRDLK ENLLLD+  N+K++DFG S     G   L   CG P Y APE+
Sbjct: 126 AVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPEL 184

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL 240
              + YDG   DVWS GVIL+ L++G LPF   +L  L +++   ++  PF+ ST   +L
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENL 244

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDI 291
           + + L  NP  R  +E I K  W    +   +     E  LD       DI
Sbjct: 245 LKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKRIDI 295

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  426 bits (1097), Expect = e-150
 Identities = 84/308 (27%), Positives = 146/308 (47%), Gaps = 13/308 (4%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD-----QIK 57
            +     KY     +G G F  V  A ++E  + V +K + K  +L+   ++     ++ 
Sbjct: 18  CEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77

Query: 58  REISIMKIVRHPNIVRLHEVLASRTKVYIILEF-VTGGELFDKIVHQGRLLENDCRRYFQ 116
            EI+I+  V H NI+++ ++  ++    +++E   +G +LF  I    RL E      F+
Sbjct: 78  LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           QL+ AV +   K + HRD+K EN+++     +K+ DFG +A  ++G +L +T CGT  Y 
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG-KLFYTFCGTIEYC 196

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTG 236
           APEVL    Y G   ++WS GV L+ L+    PF E       ++   A    P+  S  
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE------LEETVEAAIHPPYLVSKE 250

Query: 237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQYV 296
             SL+  +L P P+ R  +E +   PW  +  N    + EE   ++   +         +
Sbjct: 251 LMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEM 310

Query: 297 AEQSENKV 304
             +S + V
Sbjct: 311 GNRSLSDV 318

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  413 bits (1064), Expect = e-145
 Identities = 85/286 (29%), Positives = 135/286 (47%), Gaps = 17/286 (5%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ---IKR 58
           K +    A+Y +G  +G+G F  V           VA+KV+ ++ +L    +        
Sbjct: 24  KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83

Query: 59  EISIMKIVR----HPNIVRLHEVLASRTKVYIILEF-VTGGELFDKIVHQGRLLENDCRR 113
           E++++  V     HP ++RL +   ++    ++LE  +   +LFD I  +G L E   R 
Sbjct: 84  EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRC 143

Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGT 172
           +F Q++ A+ HCHS+GV HRD+K EN+L+D   G  K+ DFG  AL            GT
Sbjct: 144 FFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE--PYTDFDGT 201

Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW 232
             Y  PE +S   Y    A VWS G++L+ ++ G +PF         ++I  AE   P  
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER------DQEILEAELHFPAH 255

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEE 278
            S    +LI + L P P +R  +E I   PW +     V  +  + 
Sbjct: 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNPSKG 301

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  409 bits (1054), Expect = e-144
 Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 15/289 (5%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKR 58
           K++    ++Y+VG  +G G F  V           VA+K + K  I     +    ++  
Sbjct: 36  KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95

Query: 59  EISIMKIVRH--PNIVRLHEVLASRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYF 115
           E+ ++K V      ++RL +         +ILE      +LFD I  +G L E   R +F
Sbjct: 96  EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPN 174
            Q+++AV HCH+ GV HRD+K EN+L+D   G LK+ DFG  AL +    +     GT  
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--VYTDFDGTRV 213

Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFS 234
           Y  PE +    Y G +A VWS G++L+ ++ G +PF         ++I   +       S
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVS 267

Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDD 283
           +    LI   L   P  R   E I+ HPW +    P + +E    +L  
Sbjct: 268 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 316

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  403 bits (1037), Expect = e-141
 Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 48/323 (14%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR--------- 51
           +K++ + +  Y + RT+ +G F K+      +  +  A+K   KS + K R         
Sbjct: 23  VKEKDKYINDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80

Query: 52  -----MVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRL 106
                  D  K E+ I+  +++   +    ++ +  +VYII E++    +     +   L
Sbjct: 81  ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140

Query: 107 L--------ENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSA 157
                        +   + ++++ ++ H+ K + HRD+KP N+L+D  G +K+SDFG S 
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESE 200

Query: 158 LPQQGVELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPF-GETDL 215
                   +  + GT  ++ PE  SN   Y+G+  D+WS G+ L+V+    +PF  +  L
Sbjct: 201 YMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258

Query: 216 PTLYKKINAAEFSCPF-------------------WFSTGATSLIHKILDPNPKTRIRIE 256
             L+  I       P                    + S      +   L  NP  RI  E
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318

Query: 257 GIRKHPWFRKNYNPVKCSEEEEV 279
              KH W             +E+
Sbjct: 319 DALKHEWLADTNIEDLREFSKEL 341

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  331 bits (851), Expect = e-113
 Identities = 100/273 (36%), Positives = 149/273 (54%), Gaps = 17/273 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----KHRMVDQIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+K+++K         +      ++ EI I+K
Sbjct: 11  EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 71  KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129

Query: 125 CHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL 188

Query: 182 SNRGYD--GSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWF--S 234
            + G      A D WS GVILF+ ++GY PF       +L  +I +    F    W   S
Sbjct: 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVS 248

Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             A  L+ K+L  +PK R   E   +HPW +  
Sbjct: 249 EKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  324 bits (833), Expect = e-110
 Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 38/295 (12%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R  + +E    +G+G F +V  A+N       A+K +  +       +  I  E+ ++  
Sbjct: 3   RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLAS 58

Query: 66  VRHPNIVRLHEV-------------LASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDC 111
           + H  +VR +               +  ++ ++I +E+   G L+D I  +      ++ 
Sbjct: 59  LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118

Query: 112 RRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-------- 163
            R F+Q+++A+++ HS+G+ HRDLKP N+ +D   N+K+ DFGL+    + +        
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178

Query: 164 ------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT 217
                 + L +  GT  YVA EVL   G+     D++S G+I F ++  Y      +   
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVN 236

Query: 218 LYKKINAAEFSCPFWF----STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY 268
           + KK+ +     P  F          +I  ++D +P  R     +    W    +
Sbjct: 237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKH 291

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  322 bits (828), Expect = e-110
 Identities = 102/265 (38%), Positives = 150/265 (56%), Gaps = 10/265 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y+V   +G+G F+ VR   ++ TG   A K++     L  R   +++RE  I + ++HP
Sbjct: 7   NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHP 65

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVRLH+ +   +  Y++ + VTGGELF+ IV +    E D     QQ+++++A+CHS G
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG 125

Query: 130 VYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HR+LKPENLLL S      +K++DFGL+       E  H   GTP Y++PEVL    Y
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYLSPEVLKKDPY 184

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIH 242
                D+W+CGVIL++L+ GY PF + D   LY +I A   ++  P W   +  A SLI 
Sbjct: 185 -SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKN 267
            +L  NPK RI  +   K PW    
Sbjct: 244 SMLTVNPKKRITADQALKVPWICNR 268

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  319 bits (819), Expect = e-108
 Identities = 105/267 (39%), Positives = 149/267 (55%), Gaps = 15/267 (5%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
             Y +  TIG G++ +V+ A  + T    A K + K  +     VD+ K+EI IMK + H
Sbjct: 9   QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 65

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           PNI+RL+E     T +Y+++E  TGGELF+++VH+    E+D  R  + ++ AVA+CH  
Sbjct: 66  PNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125

Query: 129 GVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
            V HRDLKPEN L  +      LK+ DFGL+A  + G +++ T  GTP YV+P+VL    
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVSPQVL-EGL 183

Query: 186 YDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATSL 240
           Y G   D WS GV+++VL+ GY PF   TD   +  KI      F    W   S  A SL
Sbjct: 184 Y-GPECDEWSAGVMMYVLLCGYPPFSAPTD-SEVMLKIREGTFTFPEKDWLNVSPQAESL 241

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRKN 267
           I ++L  +PK RI      +H WF K 
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWFEKQ 268

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  322 bits (827), Expect = e-108
 Identities = 100/274 (36%), Positives = 150/274 (54%), Gaps = 19/274 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----KHRMVDQIKREISIMK 64
           +Y + +T+G G   +V+ A  R+T + VA+++++K         +      ++ EI I+K
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
            + HP I+++     +    YI+LE + GGELFDK+V   RL E  C+ YF Q++ AV +
Sbjct: 196 KLNHPCIIKIKNFFDAE-DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254

Query: 125 CHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
            H  G+ HRDLKPEN+LL S      +K++DFG S +  +   L+ T CGTP Y+APEVL
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET-SLMRTLCGTPTYLAPEVL 313

Query: 182 SN---RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWF-- 233
            +    GY   A D WS GVILF+ ++GY PF       +L  +I +    F    W   
Sbjct: 314 VSVGTAGY-NRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372

Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
           S  A  L+ K+L  +PK R   E   +HPW +  
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  318 bits (817), Expect = e-107
 Identities = 103/288 (35%), Positives = 154/288 (53%), Gaps = 13/288 (4%)

Query: 1   MKKQTRRV-AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
           M   + +    Y+V   +G+G F+ VR   ++ TG   A K++     L  R   +++RE
Sbjct: 20  MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK-LSARDFQKLERE 78

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
             I + ++HPNIVRLH+ +   +  Y++ + VTGGELF+ IV +    E D     QQ++
Sbjct: 79  ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL 138

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           +++A+CHS G+ HR+LKPENLLL S      +K++DFGL+       E  H   GTP Y+
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS-EAWHGFAGTPGYL 197

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW- 232
           +PEVL    Y     D+W+CGVIL++L+ GY PF  E     LY +I A   ++  P W 
Sbjct: 198 SPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEWD 255

Query: 233 -FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
             +  A SLI  +L  NPK RI  +   K PW             ++ 
Sbjct: 256 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDT 303

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  314 bits (806), Expect = e-106
 Identities = 83/276 (30%), Positives = 140/276 (50%), Gaps = 21/276 (7%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD------QIKREISIM 63
            YE    +G G  + VR   ++ T +  A+K++  +        +         +E+ I+
Sbjct: 18  NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77

Query: 64  KIV-RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           + V  HPNI++L +   + T  +++ + +  GELFD +  +  L E + R+  + L++ +
Sbjct: 78  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL- 181
              H   + HRDLKPEN+LLD   N+K++DFG S     G E L   CGTP+Y+APE++ 
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIE 196

Query: 182 -----SNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW- 232
                ++ GY G   D+WS GVI++ L+AG  PF        + + I +   +F  P W 
Sbjct: 197 CSMNDNHPGY-GKEVDMWSTGVIMYTLLAGSPPFWHRKQ-MLMLRMIMSGNYQFGSPEWD 254

Query: 233 -FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
            +S     L+ + L   P+ R   E    HP+F++ 
Sbjct: 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 290

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  316 bits (811), Expect = e-106
 Identities = 91/275 (33%), Positives = 147/275 (53%), Gaps = 20/275 (7%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-----LKHRMVDQIKREISIM 63
            KY+    IG G  + VR   +R TG   A+K++  +           + +  +RE  I+
Sbjct: 94  QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153

Query: 64  K-IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           + +  HP+I+ L +   S + ++++ + +  GELFD +  +  L E + R   + L++AV
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAV 213

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL- 181
           +  H+  + HRDLKPEN+LLD    +++SDFG S   + G E L   CGTP Y+APE+L 
Sbjct: 214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILK 272

Query: 182 -----SNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW- 232
                ++ GY G   D+W+CGVILF L+AG  PF        + + I     +FS P W 
Sbjct: 273 CSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQ-ILMLRMIMEGQYQFSSPEWD 330

Query: 233 -FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
             S+    LI ++L  +P+ R+  E   +HP+F +
Sbjct: 331 DRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  313 bits (804), Expect = e-106
 Identities = 102/277 (36%), Positives = 151/277 (54%), Gaps = 13/277 (4%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           + T     +     +G G F++V   + R TG+  A+K + KS   +      ++ EI++
Sbjct: 3   QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS---LENEIAV 59

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           +K ++H NIV L ++  S T  Y++++ V+GGELFD+I+ +G   E D     QQ++ AV
Sbjct: 60  LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119

Query: 123 AHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
            + H  G+ HRDLKPENLL  +      + ++DFGLS + Q G+  + T CGTP YVAPE
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTACGTPGYVAPE 177

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FST 235
           VL+ + Y   A D WS GVI ++L+ GY PF E     L++KI     EF  PFW   S 
Sbjct: 178 VLAQKPY-SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISE 236

Query: 236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
            A   I  +L+ +P  R   E    HPW   N    +
Sbjct: 237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALHR 273

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  311 bits (798), Expect = e-105
 Identities = 98/266 (36%), Positives = 151/266 (56%), Gaps = 13/266 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +   +G+G+F +V   ++R T +  A+KV+ K++  K++    I RE+ ++K + HP
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHP 81

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L E+L   +  YI+ E  TGGELFD+I+ + R  E+D  R  +Q+   + + H   
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141

Query: 130 VYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPEN+LL+S     ++K+ DFGLS   QQ    +    GT  Y+APEVL    Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL-RGTY 199

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATSLI 241
                DVWS GVIL++L++G  PF G+ +   + K++      F  P W   S  A  LI
Sbjct: 200 -DEKCDVWSAGVILYILLSGTPPFYGKNE-YDILKRVETGKYAFDLPQWRTISDDAKDLI 257

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKN 267
            K+L  +P  RI      +HPW +K 
Sbjct: 258 RKMLTFHPSLRITATQCLEHPWIQKY 283

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  310 bits (797), Expect = e-105
 Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 17/268 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +   R +G G F  V   + R +G    +K + K        ++QI+ EI ++K + HP
Sbjct: 23  LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHP 80

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHC 125
           NI+++ EV      +YI++E   GGEL ++IV        L E       +Q+++A+A+ 
Sbjct: 81  NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140

Query: 126 HSKGVYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HS+ V H+DLKPEN+L      +  +K+ DFGL+ L +   E      GT  Y+APEV  
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVF- 198

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAE--FSCPFWF-STGAT 238
            R       D+WS GV+++ L+ G LPF G +    + +K    E  ++      +  A 
Sbjct: 199 KRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSL-EEVQQKATYKEPNYAVECRPLTPQAV 256

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRK 266
            L+ ++L  +P+ R     +  H WF++
Sbjct: 257 DLLKQMLTKDPERRPSAAQVLHHEWFKQ 284

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  314 bits (806), Expect = e-104
 Identities = 104/277 (37%), Positives = 152/277 (54%), Gaps = 9/277 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y++   +G+G F+ VR       G+  A  ++     L  R   +++RE  I ++++HP
Sbjct: 12  EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK-LSARDHQKLEREARICRLLKHP 70

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVRLH+ ++     Y+I + VTGGELF+ IV +    E D     QQ+++AV HCH  G
Sbjct: 71  NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 130

Query: 130 VYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           V HR+LKPENLLL S      +K++DFGL+   +   +      GTP Y++PEVL    Y
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPY 190

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTGATSLIH 242
            G   D+W+CGVIL++L+ GY PF + D   LY++I A   +F  P W   +  A  LI+
Sbjct: 191 -GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 249

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
           K+L  NP  RI      KHPW         C   +E 
Sbjct: 250 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQET 286

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  306 bits (785), Expect = e-103
 Identities = 64/317 (20%), Positives = 117/317 (36%), Gaps = 48/317 (15%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M  Q+     + +   +G+G  A V   ++++TG+  A+KV    + L+   VD   RE 
Sbjct: 1   MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREF 58

Query: 61  SIMKIVRHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGR---LLENDCRRYF 115
            ++K + H NIV+L  +    T     +I+EF   G L+  +        L E++     
Sbjct: 59  EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSALPQQGVELLHTTCG 171
           + ++  + H    G+ HR++KP N++     D     K++DFG +   +   E   +  G
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYG 177

Query: 172 TPNYVAPEVLSNRGYD-------GSAADVWSCGVILFVLMAGYLPF-----GETDLPTLY 219
           T  Y+ P++              G+  D+WS GV  +    G LPF        +   +Y
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237

Query: 220 KKINAA------------------EFSCPFW------FSTGATSLIHKILDPNPKTRIRI 255
           K I                         P             T ++  IL+ + +     
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297

Query: 256 EGIRKHPWFRKNYNPVK 272
           +          +     
Sbjct: 298 DQFFAETSDILHRGNSH 314

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  305 bits (782), Expect = e-102
 Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 21/280 (7%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y + + IG G  +KV    N E  +  A+K +       ++ +D  + EI+ +  ++  
Sbjct: 29  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQH 86

Query: 70  N--IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +  I+RL++   +   +Y+++E     +L   +  +  +   + + Y++ +++AV   H 
Sbjct: 87  SDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRG 185
            G+ H DLKP N L+   G LK+ DFG++   Q      +  +  GT NY+ PE + +  
Sbjct: 146 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204

Query: 186 YD----------GSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKINA-AEFSCPFW 232
                          +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
                  ++   L  +PK RI I  +  HP+ +   +PV 
Sbjct: 265 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  306 bits (785), Expect = e-102
 Identities = 94/266 (35%), Positives = 147/266 (55%), Gaps = 15/266 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +EV   +G G  + V   + + T +  A+KV     + K      ++ EI ++  + HP
Sbjct: 54  FFEVESELGRGATSIVYRCKQKGTQKPYALKV-----LKKTVDKKIVRTEIGVLLRLSHP 108

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L E+  + T++ ++LE VTGGELFD+IV +G   E D     +Q+++AVA+ H  G
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG 168

Query: 130 VYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLL  +      LK++DFGLS + +    L+ T CGTP Y APE+L    Y
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ-VLMKTVCGTPGYCAPEILRGCAY 227

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATSLI 241
            G   D+WS G+I ++L+ G+ PF  E     ++++I      F  P+W   S  A  L+
Sbjct: 228 -GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKN 267
            K++  +PK R+      +HPW    
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPWVTGK 312

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  305 bits (783), Expect = e-102
 Identities = 89/271 (32%), Positives = 144/271 (53%), Gaps = 15/271 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ--IKREISIMKIVR 67
            YE+   IG+G F+ VR   NRETG+  A+K++  +       +    +KRE SI  +++
Sbjct: 25  VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL----ENDCRRYFQQLIDAVA 123
           HP+IV L E  +S   +Y++ EF+ G +L  +IV +        E     Y +Q+++A+ 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144

Query: 124 HCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           +CH   + HRD+KP  +LL S  N   +K+  FG++    +   +     GTP+++APEV
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 204

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--FSTG 236
           +    Y G   DVW CGVILF+L++G LPF  T    L++ I     + +   W   S  
Sbjct: 205 VKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISES 262

Query: 237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
           A  L+ ++L  +P  RI +     HPW ++ 
Sbjct: 263 AKDLVRRMLMLDPAERITVYEALNHPWLKER 293

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  302 bits (776), Expect = e-102
 Identities = 94/270 (34%), Positives = 153/270 (56%), Gaps = 15/270 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM---VDQIKREISIMKIV 66
            YE+G  +G G FA VR  + + TG+  A K + K  +   R     ++I+RE++I++ +
Sbjct: 6   HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           RHPNI+ LH++  ++T V +ILE V+GGELFD +  +  L E++  ++ +Q++D V + H
Sbjct: 66  RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH 125

Query: 127 SKGVYHRDLKPENLLLDSY----GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           SK + H DLKPEN++L         +K+ DFG++   + G        GTP +VAPE+++
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-NEFKNIFGTPEFVAPEIVN 184

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGA 237
                G  AD+WS GVI ++L++G  PF GET        I+A   +F   ++   S  A
Sbjct: 185 YEPL-GLEADMWSIGVITYILLSGASPFLGETK-QETLTNISAVNYDFDEEYFSNTSELA 242

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
              I ++L  +PK R+ I    +H W +  
Sbjct: 243 KDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  312 bits (801), Expect = e-101
 Identities = 73/310 (23%), Positives = 121/310 (39%), Gaps = 19/310 (6%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
              T+    +E+   +G G F  V    +++TGE VA+K   +   L  +  ++   EI 
Sbjct: 7   SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQ 64

Query: 62  IMKIVRHPNIVRLHEVLASRTKV------YIILEFVTGGELFDKIVHQGR---LLENDCR 112
           IMK + HPN+V   EV     K+       + +E+  GG+L   +        L E   R
Sbjct: 65  IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIR 124

Query: 113 RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTT 169
                +  A+ + H   + HRDLKPEN++L         K+ D G +    QG EL    
Sbjct: 125 TLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG-ELCTEF 183

Query: 170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFS 228
            GT  Y+APE+L  + Y     D WS G + F  + G+ PF         + K+      
Sbjct: 184 VGTLQYLAPELLEQKKYT-VTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNE 242

Query: 229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK--NYNPVKCSEEEEVNLDDVHA 286
               +     ++    + P P     I   +   W +    ++  +   + +        
Sbjct: 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ 302

Query: 287 VFDDIEDQYV 296
             D I    +
Sbjct: 303 ALDSILSLKL 312

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  299 bits (769), Expect = e-100
 Identities = 94/270 (34%), Positives = 147/270 (54%), Gaps = 15/270 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM---VDQIKREISIMKIV 66
            Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K +
Sbjct: 12  YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           +HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + H
Sbjct: 72  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 131

Query: 127 SKGVYHRDLKPENLLLDSY----GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           S  + H DLKPEN++L         +K+ DFGL+     G        GTP +VAPE+++
Sbjct: 132 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVN 190

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGA 237
                G  AD+WS GVI ++L++G  PF G+T   T    ++A   EF   ++   S  A
Sbjct: 191 YEPL-GLEADMWSIGVITYILLSGASPFLGDTKQET-LANVSAVNYEFEDEYFSNTSALA 248

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
              I ++L  +PK R+ I+   +HPW +  
Sbjct: 249 KDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  298 bits (766), Expect = e-100
 Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 15/282 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM---VDQIKREISIMKIV 66
            Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE+SI++ V
Sbjct: 13  FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV 72

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
            H N++ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++D V + H
Sbjct: 73  LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132

Query: 127 SKGVYHRDLKPENLLLDS----YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           +K + H DLKPEN++L        ++K+ DFGL+   + G        GTP +VAPE+++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEFVAPEIVN 191

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGA 237
                G  AD+WS GVI ++L++G  PF G+T        I +   +F   F+   S  A
Sbjct: 192 YEPL-GLEADMWSIGVITYILLSGASPFLGDTK-QETLANITSVSYDFDEEFFSHTSELA 249

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
              I K+L    + R+ I+   +HPW     N       E V
Sbjct: 250 KDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESV 291

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  303 bits (779), Expect = e-100
 Identities = 97/267 (36%), Positives = 151/267 (56%), Gaps = 11/267 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +   +G+G+F +V   ++R T +  A+KV+ K++  K++    I RE+ ++K + HP
Sbjct: 23  RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS-AKNKDTSTILREVELLKKLDHP 81

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI++L E+L   +  YI+ E  TGGELFD+I+ + R  E+D  R  +Q+   + + H   
Sbjct: 82  NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN 141

Query: 130 VYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPEN+LL+S     ++K+ DFGLS   QQ    +    GT  Y+APEVL    Y
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRIGTAYYIAPEVL-RGTY 199

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
                DVWS GVIL++L++G  PF   +   + K++   +  F  P W   S  A  LI 
Sbjct: 200 -DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYN 269
           K+L  +P  RI      +HPW +K  +
Sbjct: 259 KMLTFHPSLRITATQCLEHPWIQKYSS 285

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  299 bits (767), Expect = 1e-99
 Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 15/289 (5%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKRE 59
           KQ +    Y++G  +G G FA V+  + + TG   A K + K      R     ++I+RE
Sbjct: 6   KQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIERE 65

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           +SI++ V HPNI+ LH+V  +RT V +ILE V+GGELFD +  +  L E +   + +Q++
Sbjct: 66  VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDS----YGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           D V + H+K + H DLKPEN++L        ++K+ DFGL+   + G        GTP +
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-VEFKNIFGTPEF 184

Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW 232
           VAPE+++     G  AD+WS GVI ++L++G  PF G+T        I A   +F   F+
Sbjct: 185 VAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTK-QETLANITAVSYDFDEEFF 242

Query: 233 --FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV 279
              S  A   I K+L    + R+ I+   +HPW             E V
Sbjct: 243 SQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESV 291

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  302 bits (775), Expect = 2e-99
 Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 11/275 (4%)

Query: 1   MKKQTRRVAK-YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
           ++  T   +  Y+  R +G+G+F +V   +++ TG+  A+KV++K  + +    + + RE
Sbjct: 17  VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           + ++K + HPNI++L+E    +   Y++ E  TGGELFD+I+ + R  E D  R  +Q++
Sbjct: 77  VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL 136

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
             + + H   + HRDLKPENLLL+S     N+++ DFGLS   +   + +    GT  Y+
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYI 195

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW-- 232
           APEVL +  Y     DVWS GVIL++L++G  PF   +   + KK+   +  F  P W  
Sbjct: 196 APEVL-HGTY-DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKK 253

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
            S  A  LI K+L   P  RI       H W +  
Sbjct: 254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  296 bits (761), Expect = 5e-99
 Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 23/281 (8%)

Query: 1   MKKQTRRV-AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
           + + + +    YEV   IG G+++  +   ++ T    A+K++ K         D    E
Sbjct: 13  LHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK------SKRD-PTEE 65

Query: 60  ISIM-KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQL 118
           I I+ +  +HPNI+ L +V      VY++ E + GGEL DKI+ Q    E +       +
Sbjct: 66  IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI 125

Query: 119 IDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSALPQQGVELLHTTCGTPN 174
              V + H++GV HRDLKP N+L      +  ++++ DFG +   +    LL T C T N
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN 185

Query: 175 YVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA--EFS 228
           +VAPEVL  +GYD +A D+WS GV+L+ ++ GY PF     +T    +  +I +     S
Sbjct: 186 FVAPEVLERQGYD-AACDIWSLGVLLYTMLTGYTPFANGPDDTP-EEILARIGSGKFSLS 243

Query: 229 CPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             +W   S  A  L+ K+L  +P  R+    + +HPW    
Sbjct: 244 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  296 bits (760), Expect = 5e-99
 Identities = 72/312 (23%), Positives = 133/312 (42%), Gaps = 27/312 (8%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y + + IG G  +KV    N E  +  A+K +       ++ +D  + EI+ +  ++  
Sbjct: 10  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 67

Query: 70  N--IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +  I+RL++   +   +Y+++E     +L   +  +  +   + + Y++ +++AV   H 
Sbjct: 68  SDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRG 185
            G+ H DLKP N L+   G LK+ DFG++   Q      +  +  GT NY+ PE + +  
Sbjct: 127 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185

Query: 186 YD----------GSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKINA-AEFSCPFW 232
                          +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIE 292
                  ++   L  +PK RI I  +  HP+ +   +PV    +              + 
Sbjct: 246 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEM------KYVL 299

Query: 293 DQYVAEQSENKV 304
            Q V   S N +
Sbjct: 300 GQLVGLNSPNSI 311

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  299 bits (768), Expect = 3e-98
 Identities = 89/275 (32%), Positives = 156/275 (56%), Gaps = 12/275 (4%)

Query: 1   MKKQTRRVAK-YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
           +  +   +++ Y+  + +G G + +V   +++ T    A+K++ K++ +      ++  E
Sbjct: 28  ITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEE 86

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           ++++K++ HPNI++L++    +   Y+++E   GGELFD+I+H+ +  E D     +Q++
Sbjct: 87  VAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL 146

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
             V + H   + HRDLKPENLLL+S      +K+ DFGLSA+ +   + +    GT  Y+
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERLGTAYYI 205

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW-- 232
           APEVL  + Y     DVWS GVILF+L+AGY PFG      + +K+   +  F  P W  
Sbjct: 206 APEVL-RKKY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKN 263

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
            S GA  LI ++L  + + RI  +   +HPW ++ 
Sbjct: 264 VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  294 bits (754), Expect = 4e-98
 Identities = 85/316 (26%), Positives = 135/316 (42%), Gaps = 53/316 (16%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ--IKREISIMKIV 66
            KY +   IG+G++  VR A   +T    A+K++ K+ I +    D   IK E+ +MK +
Sbjct: 26  KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL------------------- 107
            HPNI RL+EV      + +++E   GG L DK+                          
Sbjct: 86  HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145

Query: 108 ---------------------ENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG 146
                                E       +Q+  A+ + H++G+ HRD+KPEN L  +  
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205

Query: 147 N--LKVSDFGLS----ALPQQGVELLHTTCGTPNYVAPEVLSNRGYD-GSAADVWSCGVI 199
           +  +K+ DFGLS     L       + T  GTP +VAPEVL+      G   D WS GV+
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265

Query: 200 LFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIHKILDPNPKTRIRI 255
           L +L+ G +PF   +      ++   +  F  P +   S  A  L+  +L+ N   R   
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDA 325

Query: 256 EGIRKHPWFRKNYNPV 271
               +HPW  +  + +
Sbjct: 326 MRALQHPWISQFSDKI 341

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  293 bits (752), Expect = 6e-98
 Identities = 94/315 (29%), Positives = 159/315 (50%), Gaps = 26/315 (8%)

Query: 10  KYEVG---RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
            Y++    + +GEG+F+  R   ++++ ++ A+K+++K      RM    ++EI+ +K+ 
Sbjct: 9   HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLC 62

Query: 67  R-HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
             HPNIV+LHEV   +   ++++E + GGELF++I  +    E +     ++L+ AV+H 
Sbjct: 63  EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM 122

Query: 126 HSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           H  GV HRDLKPENLL         +K+ DFG + L     + L T C T +Y APE+L+
Sbjct: 123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLN 182

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETD------LPTLYKKINAA--EFSCPFW- 232
             GYD  + D+WS GVIL+ +++G +PF              + KKI      F    W 
Sbjct: 183 QNGYD-ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241

Query: 233 -FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN-YNPVKCSEEEEVNLDDVHAVFDD 290
             S  A  LI  +L  +P  R+++ G+R + W +             ++      AV   
Sbjct: 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTC 301

Query: 291 IEDQYVAEQSENKVG 305
           ++  + A     + G
Sbjct: 302 VKATFHAFNKYKREG 316

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  294 bits (755), Expect = 1e-97
 Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 27/312 (8%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y + + IG G  +KV    N E  +  A+K +       ++ +D  + EI+ +  ++  
Sbjct: 57  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQH 114

Query: 70  N--IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +  I+RL++   +   +Y+++E     +L   +  +  +   + + Y++ +++AV   H 
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRG 185
            G+ H DLKP N L+   G LK+ DFG++   Q      +  +  G  NY+ PE + +  
Sbjct: 174 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMS 232

Query: 186 YD----------GSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKINA-AEFSCPFW 232
                          +DVWS G IL+ +  G  PF +    +  L+  I+   E   P  
Sbjct: 233 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 292

Query: 233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIE 292
                  ++   L  +PK RI I  +  HP+ +   +PV                   + 
Sbjct: 293 PEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPV------NQMAKGTTEEMKYVL 346

Query: 293 DQYVAEQSENKV 304
            Q V   S N +
Sbjct: 347 GQLVGLNSPNSI 358

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  294 bits (754), Expect = 2e-97
 Identities = 64/317 (20%), Positives = 118/317 (37%), Gaps = 48/317 (15%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
           M  Q+     + +   +G+G  A V   ++++TG+  A+KV    + L+   VD   RE 
Sbjct: 1   MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREF 58

Query: 61  SIMKIVRHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGR---LLENDCRRYF 115
            ++K + H NIV+L  +    T     +I+EF   G L+  +        L E++     
Sbjct: 59  EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVSDFGLSALPQQGVELLHTTCG 171
           + ++  + H    G+ HR++KP N++     D     K++DFG +   +   E   +  G
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYG 177

Query: 172 TPNYVAPEVLSNRGYD-------GSAADVWSCGVILFVLMAGYLPF-----GETDLPTLY 219
           T  Y+ P++              G+  D+WS GV  +    G LPF        +   +Y
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237

Query: 220 KKINAA------------------EFSCPFW------FSTGATSLIHKILDPNPKTRIRI 255
           K I                         P             T ++  IL+ + +     
Sbjct: 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGF 297

Query: 256 EGIRKHPWFRKNYNPVK 272
           +          +   + 
Sbjct: 298 DQFFAETSDILHRMVIH 314

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  291 bits (746), Expect = 4e-97
 Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 15/270 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY +   +G G F  V       + ++   K +      K      +K+EISI+ I RH 
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV----KGTDQVLVKKEISILNIARHR 61

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCHSK 128
           NI+ LHE   S  ++ +I EF++G ++F++I      L E +   Y  Q+ +A+   HS 
Sbjct: 62  NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121

Query: 129 GVYHRDLKPENLLLDSYGN--LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            + H D++PEN++  +  +  +K+ +FG +   + G +        P Y APEV  +   
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDVV 180

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATSLI 241
             +A D+WS G +++VL++G  PF  ET+   + + I  A   F    +   S  A   +
Sbjct: 181 -STATDMWSLGTLVYVLLSGINPFLAETN-QQIIENIMNAEYTFDEEAFKEISIEAMDFV 238

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
            ++L    K+R+      +HPW ++    V
Sbjct: 239 DRLLVKERKSRMTASEALQHPWLKQKIERV 268

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  296 bits (760), Expect = 7e-97
 Identities = 92/294 (31%), Positives = 151/294 (51%), Gaps = 21/294 (7%)

Query: 2   KKQTRRV-AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM-------- 52
           +K+  ++   Y   R +G G + +V   + +      A+KV+ KS   K R         
Sbjct: 28  RKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87

Query: 53  --VDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND 110
              ++I  EIS++K + HPNI++L +V   +   Y++ EF  GGELF++I+++ +  E D
Sbjct: 88  KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECD 147

Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQGVELLH 167
                +Q++  + + H   + HRD+KPEN+LL++     N+K+ DFGLS+   +    L 
Sbjct: 148 AANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-YKLR 206

Query: 168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE- 226
              GT  Y+APEVL  + Y     DVWSCGVI+++L+ GY PFG  +   + KK+   + 
Sbjct: 207 DRLGTAYYIAPEVL-KKKY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264

Query: 227 -FSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
            F    W   S  A  LI  +L  +   R   E      W +K  N +  S+++
Sbjct: 265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQK 318

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  289 bits (742), Expect = 2e-96
 Identities = 84/285 (29%), Positives = 140/285 (49%), Gaps = 16/285 (5%)

Query: 10  KYEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
            Y +  + +G G FA VR   ++ TG+  A K L K          +I  EI+++++ + 
Sbjct: 29  FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRR-RGQDCRAEILHEIAVLELAKS 87

Query: 69  -PNIVRLHEVLASRTKVYIILEFVTGGELFDKIV--HQGRLLENDCRRYFQQLIDAVAHC 125
            P ++ LHEV  + +++ +ILE+  GGE+F   +      + END  R  +Q+++ V + 
Sbjct: 88  CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL 147

Query: 126 HSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           H   + H DLKP+N+LL      G++K+ DFG+S         L    GTP Y+APE+L+
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA-CELREIMGTPEYLAPEILN 206

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGA 237
                 +A D+W+ G+I ++L+    PF GE +    Y  I+    ++S   +   S  A
Sbjct: 207 YDPI-TTATDMWNIGIIAYMLLTHTSPFVGEDN-QETYLNISQVNVDYSEETFSSVSQLA 264

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLD 282
           T  I  +L  NP+ R   E    H W ++         EE  +  
Sbjct: 265 TDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLFHPEETSSSS 309

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  289 bits (741), Expect = 2e-95
 Identities = 77/266 (28%), Positives = 129/266 (48%), Gaps = 14/266 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y++   +G G F  V     + TG     K +     L    V   K EISIM  + HP
Sbjct: 52  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHP 108

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCHSK 128
            ++ LH+    + ++ +ILEF++GGELFD+I  +   + E +   Y +Q  + + H H  
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168

Query: 129 GVYHRDLKPENLLLDSYGN--LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            + H D+KPEN++ ++     +K+ DFGL+       E++  T  T  + APE++     
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPEIVDREPV 227

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATSLI 241
            G   D+W+ GV+ +VL++G  PF GE D     + +     EF    +   S  A   I
Sbjct: 228 -GFYTDMWAIGVLGYVLLSGLSPFAGEDD-LETLQNVKRCDWEFDEDAFSSVSPEAKDFI 285

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKN 267
             +L   P+ R+ +    +HPW + +
Sbjct: 286 KNLLQKEPRKRLTVHDALEHPWLKGD 311

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  286 bits (735), Expect = 9e-95
 Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 16/268 (5%)

Query: 10  KYEVGRT--IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
            Y V +T  +G G F +V   +   TG  +A K++        +  +++K EIS+M  + 
Sbjct: 88  FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLD 144

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCH 126
           H N+++L++   S+  + +++E+V GGELFD+I+ +   L E D   + +Q+ + + H H
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204

Query: 127 SKGVYHRDLKPENLLLDSYGN--LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
              + H DLKPEN+L  +     +K+ DFGL+   +   E L    GTP ++APEV+ N 
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-EKLKVNFGTPEFLAPEVV-NY 262

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATS 239
            +     D+WS GVI ++L++G  PF G+ D       I A   +     +   S  A  
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWDLEDEEFQDISEEAKE 321

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRKN 267
            I K+L      RI      KHPW   +
Sbjct: 322 FISKLLIKEKSWRISASEALKHPWLSDH 349

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  291 bits (746), Expect = 6e-94
 Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 14/280 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y++   +G G F  V     R TG + A K +           + +++EI  M ++RHP
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHP 214

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSK 128
            +V LH+      ++ +I EF++GGELF+K+  +  ++ E++   Y +Q+   + H H  
Sbjct: 215 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274

Query: 129 GVYHRDLKPENLLLDSYG--NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
              H DLKPEN++  +     LK+ DFGL+A      + +  T GT  + APEV   +  
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEGKPV 333

Query: 187 DGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFW--FSTGATSLI 241
            G   D+WS GV+ ++L++G  PF GE D  T  + + +         +   S      I
Sbjct: 334 -GYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNMDDSAFSGISEDGKDFI 391

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
            K+L  +P TR+ I    +HPW      P + S+      
Sbjct: 392 RKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRY 431

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  280 bits (718), Expect = 9e-93
 Identities = 88/277 (31%), Positives = 134/277 (48%), Gaps = 30/277 (10%)

Query: 10  KYEVGR-TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVR 67
            Y++ +  +G G   KV    +R TG+  A+K+L  S         + ++E+    +   
Sbjct: 29  DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASG 80

Query: 68  HPNIVRLHEV----LASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDA 121
            P+IV + +V       +  + II+E + GGELF +I  +G     E +     + +  A
Sbjct: 81  GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +   HS  + HRD+KPENLL  S      LK++DFG +    Q    L T C TP YVAP
Sbjct: 141 IQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAP 198

Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDL---PTLYKKINAA--EFSCPFW 232
           EVL    YD  + D+WS GVI+++L+ G+ PF   T     P + ++I      F  P W
Sbjct: 199 EVLGPEKYD-KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW 257

Query: 233 --FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
              S  A  LI  +L  +P  R+ I     HPW  ++
Sbjct: 258 SEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  282 bits (722), Expect = 2e-92
 Identities = 91/286 (31%), Positives = 136/286 (47%), Gaps = 29/286 (10%)

Query: 1   MKKQTRRVAKYEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
             K+   +  Y+V  + +G G   KV    N+ T E  A+K+L            + +RE
Sbjct: 53  QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARRE 104

Query: 60  ISIMK-IVRHPNIVRLHEV----LASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCR 112
           + +     + P+IVR+ +V     A R  + I++E + GGELF +I  +G     E +  
Sbjct: 105 VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 164

Query: 113 RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTT 169
              + + +A+ + HS  + HRD+KPENLL  S      LK++DFG +         L T 
Sbjct: 165 EIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTP 223

Query: 170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPT---LYKKINAA 225
           C TP YVAPEVL    YD  + D+WS GVI+++L+ GY PF     L     +  +I   
Sbjct: 224 CYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282

Query: 226 --EFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
             EF  P W   S     LI  +L   P  R+ I     HPW  ++
Sbjct: 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  278 bits (713), Expect = 3e-92
 Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 40/294 (13%)

Query: 10  KYEVGR-TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR- 67
            Y++    +GEG  A+V+   N  T +  A+K++ K       +  ++ RE+ ++   + 
Sbjct: 13  VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQG 69

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           H N++ L E      + Y++ E + GG +   I  +    E +     Q +  A+   H+
Sbjct: 70  HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129

Query: 128 KGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQG-------VELLHTTCGTPNYVA 177
           KG+ HRDLKPEN+L +       +K+ DF L +  +            L T CG+  Y+A
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189

Query: 178 PEVL-----SNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPT-------------- 217
           PEV+         YD    D+WS GVIL++L++GY PF G                    
Sbjct: 190 PEVVEAFSEEASIYD-KRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248

Query: 218 LYKKINAA--EFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
           L++ I     EF    W   S  A  LI K+L  + K R+    + +HPW +  
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  269 bits (691), Expect = 7e-89
 Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 9/273 (3%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           + + +R   ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  
Sbjct: 23  QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 82

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           +M  + HP  V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A
Sbjct: 83  VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 142

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPE 179
           + + H KG+ HRDLKPEN+LL+   +++++DFG +    P+      ++  GT  YV+PE
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 202

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS 239
           +L+ +     ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  
Sbjct: 203 LLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD 261

Query: 240 LIHKILDPNPKTRI------RIEGIRKHPWFRK 266
           L+ K+L  +   R+          ++ HP+F  
Sbjct: 262 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES 294

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  267 bits (684), Expect = 3e-87
 Identities = 44/305 (14%), Positives = 96/305 (31%), Gaps = 51/305 (16%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
             R      G  +G+        A ++ETGES  + V   +       + Q+K E+  ++
Sbjct: 69  GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLR 128

Query: 65  IVR-------------------------HPNIVRLHEVLASRTKVYIILEF--------V 91
           ++R                            ++R+         +     +         
Sbjct: 129 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 188

Query: 92  TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS 151
            G  L         L+ +   +   Q+I  +A  H  G+ H  L+P +++LD  G + ++
Sbjct: 189 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT 248

Query: 152 DFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG----------YDGSAADVWSCGVILF 201
            F               +  +  +  PE+ + R               + D W+ G++++
Sbjct: 249 GFEHLVRDGA----RVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304

Query: 202 VLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH 261
            +    LP  +       + I    F           +L+   L    + R+      + 
Sbjct: 305 WIWCADLPITKDAALGGSEWI----FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360

Query: 262 PWFRK 266
           P + +
Sbjct: 361 PEYEQ 365

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  259 bits (665), Expect = 1e-85
 Identities = 80/275 (29%), Positives = 137/275 (49%), Gaps = 14/275 (5%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R   YEV  TIG G++ + +  + +  G+ +  K L   + +       +  E+++++ +
Sbjct: 4   RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS-MTEAEKQMLVSEVNLLREL 62

Query: 67  RHPNIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLID 120
           +HPNIVR ++ +  RT   +YI++E+  GG+L   I    +    L E    R   QL  
Sbjct: 63  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122

Query: 121 AVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           A+  CH +      V HRDLKP N+ LD   N+K+ DFGL+ +         T  GTP Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182

Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-PFWFS 234
           ++PE ++   Y+   +D+WS G +L+ L A   PF       L  KI   +F   P+ +S
Sbjct: 183 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 241

Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN 269
                +I ++L+     R  +E I ++P   ++++
Sbjct: 242 DELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  257 bits (659), Expect = 1e-83
 Identities = 74/261 (28%), Positives = 136/261 (52%), Gaps = 5/261 (1%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY   + IGEG+F K    ++ E G    +K +  S  +  +  ++ +RE++++  ++HP
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR-MSSKEREESRREVAVLANMKHP 83

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLL-ENDCRRYFQQLIDAVAHCHS 127
           NIV+  E       +YI++++  GG+LF +I   +G L  E+    +F Q+  A+ H H 
Sbjct: 84  NIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD 143

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + + HRD+K +N+ L   G +++ DFG++ +    VEL     GTP Y++PE+  N+ Y+
Sbjct: 144 RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYN 203

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-PFWFSTGATSLIHKILD 246
            + +D+W+ G +L+ L      F    +  L  KI +  F      +S    SL+ ++  
Sbjct: 204 -NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFK 262

Query: 247 PNPKTRIRIEGIRKHPWFRKN 267
            NP+ R  +  I +  +  K 
Sbjct: 263 RNPRDRPSVNSILEKGFIAKR 283

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  255 bits (654), Expect = 2e-83
 Identities = 84/260 (32%), Positives = 153/260 (58%), Gaps = 9/260 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +++ RT+G G+F +V   ++R  G   AMKVL K  +++ + V+    E  ++ IV HP 
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+R+        ++++I++++ GGELF  +    R      + Y  ++  A+ + HSK +
Sbjct: 68  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  G++K++DFG +   +   ++ +T CGTP+Y+APEV+S + Y   +
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFA---KYVPDVTYTLCGTPDYIAPEVVSTKPY-NKS 183

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D WS G++++ ++AGY PF +++    Y+KI  AE   P +F+     L+ +++  +  
Sbjct: 184 IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLS 243

Query: 251 TRI-----RIEGIRKHPWFR 265
            R+       E ++ HPWF+
Sbjct: 244 QRLGNLQNGTEDVKNHPWFK 263

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  259 bits (663), Expect = 3e-83
 Identities = 68/295 (23%), Positives = 112/295 (37%), Gaps = 45/295 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRH 68
                + +G G+   V F      G  VA+K +           D    EI ++ +   H
Sbjct: 16  LVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDH 68

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-------RLLENDCRRYFQQLIDA 121
           PN++R +    +   +YI LE      L D +  +           E +     +Q+   
Sbjct: 69  PNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127

Query: 122 VAHCHSKGVYHRDLKPENLLLDS-------------YGNLKVSDFGLSALPQQGVE---- 164
           VAH HS  + HRDLKP+N+L+ +                + +SDFGL      G      
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187

Query: 165 LLHTTCGTPNYVAPEVLSNRGYD------GSAADVWSCGVILFVLM-AGYLPFG---ETD 214
            L+   GT  + APE+L              + D++S G + + ++  G  PFG     +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247

Query: 215 LPTLYKKINAAEFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
              +    +  E  C         AT LI +++D +P  R     + +HP F   
Sbjct: 248 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK 302

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  256 bits (656), Expect = 3e-83
 Identities = 83/269 (30%), Positives = 147/269 (54%), Gaps = 9/269 (3%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
            + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  
Sbjct: 34  SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++  
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
             + HS  + +RDLKPENLL+D  G ++V+DFG +   ++      T CGTP  +APE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA---KRVKGRTWTLCGTPEALAPEII 210

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
            ++GY   A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+
Sbjct: 211 LSKGY-NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLL 269

Query: 242 HKILDPNPKTRI-----RIEGIRKHPWFR 265
             +L  +   R       +  I+ H WF 
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  254 bits (651), Expect = 6e-83
 Identities = 62/285 (21%), Positives = 110/285 (38%), Gaps = 25/285 (8%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y   + +GEG F+ V   +    G   A+K +      + +  ++ +RE  + ++  HP
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHP 86

Query: 70  NIVRLHEVLASRT----KVYIILEFVTGGELFDKI----VHQGRLLENDCRRYFQQLIDA 121
           NI+RL            + +++L F   G L+++I         L E+        +   
Sbjct: 87  NILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG 146

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ---------QGVELLHTTCGT 172
           +   H+KG  HRDLKP N+LL   G   + D G                 ++       T
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 173 PNYVAPEVLSNRGYD--GSAADVWSCGVILFVLMAGYLPFGETDLPT-LYKKINAAEFSC 229
            +Y APE+ S + +       DVWS G +L+ +M G  P+                + S 
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266

Query: 230 PFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
           P     S+    L++ ++  +P  R  I  +       +   P +
Sbjct: 267 PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  250 bits (640), Expect = 5e-81
 Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 36/283 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-H 68
           +  V R + EG FA V  AQ+  +G   A+K L  +   +      I +E+  MK +  H
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGH 85

Query: 69  PNIVRLH-------EVLASRTKVYIILEFVTGGELFDKIV---HQGRLLENDCRRYFQQL 118
           PNIV+         E   +    +++L  +  G+L + +     +G L  +   + F Q 
Sbjct: 86  PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQT 145

Query: 119 IDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG------------VE 164
             AV H H +   + HRDLK ENLLL + G +K+ DFG +                  VE
Sbjct: 146 CRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205

Query: 165 LLHTTCGTPNYVAPEV--LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI 222
              T   TP Y  PE+  L +    G   D+W+ G IL++L     PF +        +I
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK----LRI 261

Query: 223 NAAEFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPW 263
              ++S P      T   SLI  +L  NP+ R+ I  +     
Sbjct: 262 VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  248 bits (636), Expect = 6e-81
 Identities = 81/285 (28%), Positives = 126/285 (44%), Gaps = 50/285 (17%)

Query: 2   KKQTRRVAKYEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREI 60
            K+   +  Y+V  + +G G   KV    N+ T E  A+K+L            + +RE+
Sbjct: 10  IKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREV 61

Query: 61  SIM-KIVRHPNIVRLHEV----LASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRR 113
            +  +  + P+IVR+ +V     A R  + I++E + GGELF +I  +G     E +   
Sbjct: 62  ELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASE 121

Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLHTTC 170
             + + +A+ + HS  + HRD+KPENLL  S      LK++DFG                
Sbjct: 122 IMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------- 166

Query: 171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPT---LYKKINAA- 225
                 A E      YD  + D+WS GVI+++L+ GY PF     L     +  +I    
Sbjct: 167 ------AKETT-GEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 218

Query: 226 -EFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
            EF  P W   S     LI  +L   P  R+ I     HPW  ++
Sbjct: 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  250 bits (639), Expect = 1e-79
 Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 26/275 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRH 68
            +     +G G    + +         VA+K +               RE+ +++    H
Sbjct: 25  SFCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPE------CFSFADREVQLLRESDEH 77

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHS 127
           PN++R       R   YI +E      L + +       L  +     QQ    +AH HS
Sbjct: 78  PNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS 136

Query: 128 KGVYHRDLKPENLLLDSYGN-----LKVSDFGLS---ALPQQGVELLHTTCGTPNYVAPE 179
             + HRDLKP N+L+            +SDFGL    A+ +          GT  ++APE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196

Query: 180 VLS---NRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEFSCPFWF-- 233
           +LS            D++S G + + +++ G  PFG++        + A    C      
Sbjct: 197 MLSEDCKENPT-YTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKH 255

Query: 234 -STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
               A  LI K++  +P+ R   + + KHP+F   
Sbjct: 256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  243 bits (622), Expect = 1e-77
 Identities = 72/258 (27%), Positives = 133/258 (51%), Gaps = 9/258 (3%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R IG+G+F KV   Q  +T +  AMK + K   ++   V  + +E+ IM+ + HP +V L
Sbjct: 21  RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                    ++++++ + GG+L   +       E   + +  +L+ A+ +  ++ + HRD
Sbjct: 81  WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRD 140

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR---GYDGSAA 191
           +KP+N+LLD +G++ ++DF ++A+  +    + T  GT  Y+APE+ S+R   GY   A 
Sbjct: 141 MKPDNILLDEHGHVHITDFNIAAMLPRE-TQITTMAGTKPYMAPEMFSSRKGAGY-SFAV 198

Query: 192 DVWSCGVILFVLMAGYLPF---GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
           D WS GV  + L+ G  P+     T    +         + P  +S    SL+ K+L+PN
Sbjct: 199 DWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPN 258

Query: 249 PKTRI-RIEGIRKHPWFR 265
           P  R  ++  ++  P+  
Sbjct: 259 PDQRFSQLSDVQNFPYMN 276

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  241 bits (616), Expect = 1e-77
 Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 9/276 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            + + + IG G F++V  A     G  VA+K +    ++  +      +EI ++K + HP
Sbjct: 33  NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLIDAVAHC 125
           N+++ +       ++ I+LE    G+L   I H  +    + E    +YF QL  A+ H 
Sbjct: 93  NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HS+ V HRD+KP N+ + + G +K+ D GL           H+  GTP Y++PE +   G
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENG 212

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFG--ETDLPTLYKKINAAEFSC--PFWFSTGATSLI 241
           Y+   +D+WS G +L+ + A   PF   + +L +L KKI   ++       +S     L+
Sbjct: 213 YN-FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV 271

Query: 242 HKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
           +  ++P+P+ R  +  +                   
Sbjct: 272 NMCINPDPEKRPDVTYVYDVAKRMHACTASSLEHHH 307

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  243 bits (620), Expect = 1e-77
 Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 45/304 (14%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           ++   K ++   +  G  + V   ++ E  E  A+KV           ++++        
Sbjct: 58  SQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAA 117

Query: 65  IVRHPNIVRLHEVL--------------------------ASRTKVYIILEFVTG----- 93
            +   +     +                             +     +++   +      
Sbjct: 118 RLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELL 177

Query: 94  GELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD 152
               D +                 QLI   A+  SKG+ H    P+NL +   G L + D
Sbjct: 178 FSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGD 237

Query: 153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD-GSAADVWSCGVILFVLMAGYLPFG 211
                           +     Y   E L+        A + W  G+ ++ +   +LPFG
Sbjct: 238 VSALWKVG---TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG 294

Query: 212 ETD--LPTLYKKINAAE-------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHP 262
                +   +K+ +          F           +LI + L+ + + R+      + P
Sbjct: 295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354

Query: 263 WFRK 266
            F +
Sbjct: 355 EFLQ 358

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  238 bits (609), Expect = 5e-77
 Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 31/281 (11%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
            R    ++    IG G F +V  A++R  G++  +K +  +        ++ +RE+  + 
Sbjct: 7   KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALA 59

Query: 65  IVRHPNIVRLHE----------------VLASRTKVYIILEFVTGGELFDKIVHQ--GRL 106
            + H NIV  +                   +    ++I +EF   G L   I  +   +L
Sbjct: 60  KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119

Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
            +      F+Q+   V + HSK + +RDLKP N+ L     +K+ DFGL    +      
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND-GKR 178

Query: 167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE 226
             + GT  Y++PE +S++ Y     D+++ G+IL  L+       ET     +  +    
Sbjct: 179 TRSKGTLRYMSPEQISSQDYG-KEVDLYALGLILAELLHVCDTAFETS--KFFTDLRDGI 235

Query: 227 FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN 267
                 F     +L+ K+L   P+ R     I +     K 
Sbjct: 236 I--SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK 274

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  239 bits (611), Expect = 7e-77
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 8/267 (2%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           + ++     ++    +G G++ +V   +++E G   A+K              ++    S
Sbjct: 50  RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGS 109

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLID 120
             K+ +HP  VRL +       +Y+  E   G  L       G  L E     Y +  + 
Sbjct: 110 HEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLL 168

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           A+AH HS+G+ H D+KP N+ L   G  K+ DFGL               G P Y+APE+
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-GAGEVQEGDPRYMAPEL 227

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGY-LPFGETDLPTLYKKINAAEFSCPFWFSTGATS 239
           L    Y  +AADV+S G+ +  +     LP G      L +     EF      S+   S
Sbjct: 228 LQG-SYG-TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEF--TAGLSSELRS 283

Query: 240 LIHKILDPNPKTRIRIEGIRKHPWFRK 266
           ++  +L+P+PK R   E +   P  R+
Sbjct: 284 VLVMMLEPDPKLRATAEALLALPVLRQ 310

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  235 bits (603), Expect = 2e-75
 Identities = 88/261 (33%), Positives = 143/261 (54%), Gaps = 10/261 (3%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIVRHPN 70
           R +G+G + KV   R      TG+  AMKVL K+ I+   +     K E +I++ V+HP 
Sbjct: 23  RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV L     +  K+Y+ILE+++GGELF ++  +G  +E+    Y  ++  A+ H H KG+
Sbjct: 83  IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN++L+  G++K++DFGL         + HT CGT  Y+APE+L   G+   A
Sbjct: 143 IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH-NRA 201

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D WS G +++ ++ G  PF   +      KI   + + P + +  A  L+ K+L  N  
Sbjct: 202 VDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAA 261

Query: 251 TRI-----RIEGIRKHPWFRK 266
           +R+         ++ HP+FR 
Sbjct: 262 SRLGAGPGDAGEVQAHPFFRH 282

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  234 bits (598), Expect = 3e-75
 Identities = 68/295 (23%), Positives = 113/295 (38%), Gaps = 33/295 (11%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
           R +  +E  + +G G F  V  A+N+    + A+K +        R   ++ RE+  +  
Sbjct: 2   RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE--KVMREVKALAK 59

Query: 66  VRHPNIVRLHEV------------LASRTKVYIILEFVTGGELFDKIVHQGRLL---END 110
           + HP IVR                 + +  +YI ++      L D +  +  +     + 
Sbjct: 60  LEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSV 119

Query: 111 CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL------------ 158
           C   F Q+ +AV   HSKG+ HRDLKP N+       +KV DFGL               
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179

Query: 159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
           P           GT  Y++PE +    Y     D++S G+ILF L+  Y    + +    
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELL--YPFSTQMERVRT 236

Query: 219 YKKINAAEFS-CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
              +   +F             ++  +L P+P  R     I ++  F     P K
Sbjct: 237 LTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDFPGK 291

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  234 bits (598), Expect = 1e-74
 Identities = 85/256 (33%), Positives = 134/256 (52%), Gaps = 6/256 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 11  KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD 134
                +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ V +RD
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130

Query: 135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW 194
           +K ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y G A D W
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDWW 189

Query: 195 SCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI- 253
             GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +PK R+ 
Sbjct: 190 GLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249

Query: 254 ----RIEGIRKHPWFR 265
                 + + +H +F 
Sbjct: 250 GGPSDAKEVMEHRFFL 265

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  234 bits (599), Expect = 2e-74
 Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 6/256 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           + IG+G+F KV  A+++      A+KVL K  ILK +    I  E +++ K V+HP +V 
Sbjct: 44  KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  K+Y +L+++ GGELF  +  +   LE   R Y  ++  A+ + HS  + +R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLKPEN+LLDS G++ ++DFGL     +      T CGTP Y+APEVL  + Y     D 
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY-DRTVDW 222

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W  G +L+ ++ G  PF   +   +Y  I           +  A  L+  +L  +   R+
Sbjct: 223 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL 282

Query: 254 ----RIEGIRKHPWFR 265
                   I+ H +F 
Sbjct: 283 GAKDDFMEIKSHVFFS 298

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  235 bits (601), Expect = 3e-74
 Identities = 86/266 (32%), Positives = 140/266 (52%), Gaps = 13/266 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YEV + IG G F +V+  +++ T +  AMK+L+K  ++K         E  IM     P 
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           +V+L         +Y+++E++ GG+L   ++    + E   R Y  +++ A+   HS G 
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGF 189

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYD-- 187
            HRD+KP+N+LLD  G+LK++DFG    + ++G+    T  GTP+Y++PEVL ++G D  
Sbjct: 190 IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249

Query: 188 -GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGATSLIH 242
            G   D WS GV L+ ++ G  PF    L   Y KI   + S  F      S  A +LI 
Sbjct: 250 YGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 309

Query: 243 KILDPNPKTRIRIEG---IRKHPWFR 265
             L  + + R+   G   I++H +F+
Sbjct: 310 AFLT-DREVRLGRNGVEEIKRHLFFK 334

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  232 bits (593), Expect = 5e-74
 Identities = 94/260 (36%), Positives = 145/260 (55%), Gaps = 10/260 (3%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + +G+G+F KV   +     +  +  AMKVL K+T+     V   K E  I+  V HP I
Sbjct: 30  KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKMERDILVEVNHPFI 88

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           V+LH    +  K+Y+IL+F+ GG+LF ++  +    E D + Y  +L  A+ H HS G+ 
Sbjct: 89  VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGII 148

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAA 191
           +RDLKPEN+LLD  G++K++DFGLS       +  ++ CGT  Y+APEV++ RG+   +A
Sbjct: 149 YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH-TQSA 207

Query: 192 DVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKT 251
           D WS GV++F ++ G LPF   D       I  A+   P + S  A SL+  +   NP  
Sbjct: 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPAN 267

Query: 252 RI-----RIEGIRKHPWFRK 266
           R+      +E I++H +F  
Sbjct: 268 RLGAGPDGVEEIKRHSFFST 287

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  230 bits (590), Expect = 3e-73
 Identities = 78/253 (30%), Positives = 133/253 (52%), Gaps = 3/253 (1%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           + +G+G+F KV  A+ ++T +  A+K L K  +L    V+    E  ++     HP +  
Sbjct: 23  KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           +     ++  ++ ++E++ GG+L   I    +   +    Y  ++I  +   HSKG+ +R
Sbjct: 83  MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYR 142

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD  G++K++DFG+      G    +T CGTP+Y+APE+L  + Y   + D 
Sbjct: 143 DLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKY-NHSVDW 201

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           WS GV+L+ ++ G  PF   D   L+  I       P W    A  L+ K+    P+ R+
Sbjct: 202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRL 261

Query: 254 RIEG-IRKHPWFR 265
            + G IR+HP FR
Sbjct: 262 GVRGDIRQHPLFR 274

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  230 bits (589), Expect = 5e-73
 Identities = 87/258 (33%), Positives = 136/258 (52%), Gaps = 8/258 (3%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           R +G+G+F KV  A+ +ETG+  A+KVL K  IL+   V+    E  I+     HP + +
Sbjct: 29  RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           L     +  +++ ++EFV GG+L   I    R  E   R Y  ++I A+   H KG+ +R
Sbjct: 89  LFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYR 148

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLD  G+ K++DFG+            T CGTP+Y+APE+L    Y G A D 
Sbjct: 149 DLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLY-GPAVDW 207

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W+ GV+L+ ++ G+ PF   +   L++ I   E   P W    AT ++   +  NP  R+
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRL 267

Query: 254 ------RIEGIRKHPWFR 265
                     I +HP+F+
Sbjct: 268 GSLTQGGEHAILRHPFFK 285

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  229 bits (587), Expect = 9e-73
 Identities = 75/257 (29%), Positives = 136/257 (52%), Gaps = 7/257 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
             +G+G+F KV  ++ + T E  A+K+L K  +++   V+    E  ++    + P + +
Sbjct: 26  MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  ++Y ++E+V GG+L   I   GR  E     Y  ++   +    SKG+ +R
Sbjct: 86  LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N++LDS G++K++DFG+            T CGTP+Y+APE+++ + Y G + D 
Sbjct: 146 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY-GKSVDW 204

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W+ GV+L+ ++AG  PF   D   L++ I     + P   S  A ++   ++  +P  R+
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRL 264

Query: 254 -----RIEGIRKHPWFR 265
                    I++H +FR
Sbjct: 265 GCGPEGERDIKEHAFFR 281

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  228 bits (584), Expect = 2e-72
 Identities = 84/267 (31%), Positives = 142/267 (53%), Gaps = 17/267 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           R IG G++AKV   + ++T    AMKV+ K  +     +D ++ E  +  +   HP +V 
Sbjct: 15  RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H +G+ +R
Sbjct: 75  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 134

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLDS G++K++D+G+     +  +   T CGTPNY+APE+L    Y G + D 
Sbjct: 135 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY-GFSVDW 193

Query: 194 WSCGVILFVLMAGYLPFGETDLPT---------LYKKINAAEFSCPFWFSTGATSLIHKI 244
           W+ GV++F +MAG  PF                L++ I   +   P   S  A S++   
Sbjct: 194 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF 253

Query: 245 LDPNPKTRI------RIEGIRKHPWFR 265
           L+ +PK R+          I+ HP+FR
Sbjct: 254 LNKDPKERLGCHPQTGFADIQGHPFFR 280

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  231 bits (590), Expect = 2e-72
 Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 17/270 (6%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F +V   + +   +  AMK+L K  +LK       + E  ++       
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           I  LH        +Y+++++  GG+L   +   + RL E   R Y  +++ A+   H   
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVL-----SN 183
             HRD+KP+N+L+D  G+++++DFG    L + G        GTP+Y++PE+L       
Sbjct: 196 YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGK 255

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF-----WFSTGAT 238
             Y G   D WS GV ++ ++ G  PF    L   Y KI   +    F       S  A 
Sbjct: 256 GRY-GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAK 314

Query: 239 SLIHKILDPNPKTRIRIEG---IRKHPWFR 265
            LI +++      R+   G    +KHP+F 
Sbjct: 315 DLIRRLICSREH-RLGQNGIEDFKKHPFFS 343

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  230 bits (588), Expect = 7e-72
 Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 7/257 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP +  L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHR 133
                +  ++  ++E+  GGELF  +  +    E+  R Y  +++ A+ + HS K V +R
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 273

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK ENL+LD  G++K++DFGL     +    + T CGTP Y+APEVL +  Y G A D 
Sbjct: 274 DLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDY-GRAVDW 332

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W  GV+++ +M G LPF   D   L++ I   E   P      A SL+  +L  +PK R+
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRL 392

Query: 254 -----RIEGIRKHPWFR 265
                  + I +H +F 
Sbjct: 393 GGGSEDAKEIMQHRFFA 409

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  228 bits (583), Expect = 1e-71
 Identities = 83/267 (31%), Positives = 142/267 (53%), Gaps = 17/267 (6%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVR 73
           R IG G++AKV   + ++T    AM+V+ K  +     +D ++ E  +  +   HP +V 
Sbjct: 58  RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    + ++++ ++E+V GG+L   +  Q +L E   R Y  ++  A+ + H +G+ +R
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 177

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N+LLDS G++K++D+G+     +  +   T CGTPNY+APE+L    Y G + D 
Sbjct: 178 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY-GFSVDW 236

Query: 194 WSCGVILFVLMAGYLPFGET---------DLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
           W+ GV++F +MAG  PF                L++ I   +   P   S  A S++   
Sbjct: 237 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKSF 296

Query: 245 LDPNPKTRI------RIEGIRKHPWFR 265
           L+ +PK R+          I+ HP+FR
Sbjct: 297 LNKDPKERLGCHPQTGFADIQGHPFFR 323

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  227 bits (579), Expect = 1e-71
 Identities = 42/287 (14%), Positives = 97/287 (33%), Gaps = 36/287 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
              V   +GEG FA+V  A        +  +   +KV   +   +  +     + +  +K
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYI---GTQLMERLK 122

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR-----LLENDCRRYFQQLI 119
                  ++ +     +    ++ E  + G L + I          + +     +  +++
Sbjct: 123 PSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRML 182

Query: 120 DAVAHCHSKGVYHRDLKPENLLL-----------DSYGNLKVSDFGLSA--LPQQGVELL 166
             +   H   + H D+KP+N +L           D    L + D G S          + 
Sbjct: 183 YMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIF 242

Query: 167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPTLYKKINAA 225
              C T  +   E+LSN+ ++    D +     ++ ++ G Y+           + +   
Sbjct: 243 TAKCETSGFQCVEMLSNKPWN-YQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRR 301

Query: 226 EFSCPFWFSTGATSLIHKILDPNPKTRI-RIEGIRK--HPWFRKNYN 269
                 W         H +L+      +  ++ +R+     F+++Y 
Sbjct: 302 LPHLDMW-----NEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT 343

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  228 bits (582), Expect = 2e-71
 Identities = 48/300 (16%), Positives = 98/300 (32%), Gaps = 42/300 (14%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
             R      G  +G+        A ++ETGES  + V   +       + Q+K E+  ++
Sbjct: 74  GERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLR 133

Query: 65  ----------------------IVRHPNIVRLHEVLASRTKVYIILEFVT---------- 92
                                 +V+ P   ++  V      ++++  F            
Sbjct: 134 LLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQT 193

Query: 93  -GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS 151
            G  L         L+ +   +   Q+I  +A  H  G+ H  L+P +++LD  G + ++
Sbjct: 194 FGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT 253

Query: 152 DFGLSALPQQ-GVELLHTTCGTPNYVAPEVLSNRGYDGS----AADVWSCGVILFVLMAG 206
            F          V  +      P   A  +L    +  +    A D W+ G+ ++ +   
Sbjct: 254 GFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA 313

Query: 207 YLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
            LP  +       + I    F           +L+   L    + R+      + P + +
Sbjct: 314 DLPNTDDAALGGSEWI----FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  227 bits (581), Expect = 3e-71
 Identities = 76/271 (28%), Positives = 125/271 (46%), Gaps = 17/271 (6%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+ + IG G F++V   + ++TG+  AMK++ K  +LK   V   + E  ++       
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRW 122

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKG 129
           I +LH        +Y+++E+  GG+L   +   G R+     R Y  +++ A+   H  G
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG 182

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGYD- 187
             HRD+KP+N+LLD  G+++++DFG    L   G        GTP+Y++PE+L   G   
Sbjct: 183 YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242

Query: 188 -----GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF-----WFSTGA 237
                G   D W+ GV  + +  G  PF        Y KI   +               A
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302

Query: 238 TSLIHKILDPNPKTRIRIEG---IRKHPWFR 265
              I ++L   P+TR+   G    R HP+F 
Sbjct: 303 RDFIQRLLC-PPETRLGRGGAGDFRTHPFFF 332

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  221 bits (566), Expect = 1e-69
 Identities = 86/270 (31%), Positives = 151/270 (55%), Gaps = 20/270 (7%)

Query: 15  RTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTIL-KHRMVDQIKREISIM-KIVRHP 69
           + +G G + KV   R     +TG+  AMKVL K+TI+ K +  +  + E  ++  I + P
Sbjct: 60  KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
            +V LH    + TK+++IL+++ GGELF  +  + R  E++ + Y  +++ A+ H H  G
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS--ALPQQGVELLHTTCGTPNYVAPEVL--SNRG 185
           + +RD+K EN+LLDS G++ ++DFGLS   +  +  E  +  CGT  Y+AP+++   + G
Sbjct: 180 IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET-ERAYDFCGTIEYMAPDIVRGGDSG 238

Query: 186 YDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           +   A D WS GV+++ L+ G  PF     +     + ++I  +E   P   S  A  LI
Sbjct: 239 H-DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLI 297

Query: 242 HKILDPNPKTRI-----RIEGIRKHPWFRK 266
            ++L  +PK R+       + I++H +F+K
Sbjct: 298 QRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  227 bits (580), Expect = 1e-68
 Identities = 75/257 (29%), Positives = 137/257 (53%), Gaps = 7/257 (2%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVR 73
             +G+G+F KV  ++ + T E  A+K+L K  +++   V+    E  ++ +  + P + +
Sbjct: 347 MVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
           LH    +  ++Y ++E+V GG+L   I   GR  E     Y  ++   +    SKG+ +R
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 466

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADV 193
           DLK +N++LDS G++K++DFG+            T CGTP+Y+APE+++ + Y G + D 
Sbjct: 467 DLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPY-GKSVDW 525

Query: 194 WSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRI 253
           W+ GV+L+ ++AG  PF   D   L++ I     + P   S  A ++   ++  +P  R+
Sbjct: 526 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRL 585

Query: 254 -----RIEGIRKHPWFR 265
                    I++H +FR
Sbjct: 586 GCGPEGERDIKEHAFFR 602

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  223 bits (569), Expect = 4e-68
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G G F +V   Q + TG+  A K L K  + K +       E  I+  V    IV L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGV 130
                ++T + +++  + GG++   I +         E     Y  Q++  + H H + +
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  GN+++SD GL+   + G        GTP ++APE+L    Y   +
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY-DFS 369

Query: 191 ADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD 246
            D ++ GV L+ ++A   PF     + +   L +++     + P  FS  +      +L 
Sbjct: 370 VDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALLQ 429

Query: 247 PNPKTRI-----RIEGIRKHPWFR 265
            +P+ R+       +G+R HP FR
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFR 453

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  223 bits (570), Expect = 5e-67
 Identities = 80/264 (30%), Positives = 127/264 (48%), Gaps = 15/264 (5%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNI 71
           R IG G F +V   +  +TG+  AMK L K  I   +       E  ++ +V     P I
Sbjct: 195 RIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVY 131
           V +     +  K+  IL+ + GG+L   +   G   E D R Y  ++I  + H H++ V 
Sbjct: 255 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS-NRGYDGSA 190
           +RDLKP N+LLD +G++++SD GL+    +     H + GT  Y+APEVL     Y  S+
Sbjct: 315 YRDLKPANILLDEHGHVRISDLGLACDFSKKKP--HASVGTHGYMAPEVLQKGVAY-DSS 371

Query: 191 ADVWSCGVILFVLMAGYLPF---GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP 247
           AD +S G +LF L+ G+ PF      D   + +         P  FS    SL+  +L  
Sbjct: 372 ADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQR 431

Query: 248 NPKTRIR-----IEGIRKHPWFRK 266
           +   R+       + +++ P+FR 
Sbjct: 432 DVNRRLGCLGRGAQEVKESPFFRS 455

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  220 bits (562), Expect = 8e-67
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 13/262 (4%)

Query: 15  RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           R +G+G F +V   Q R TG+  A K L K  I K +       E  I++ V    +V L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLL--ENDCRRYFQQLIDAVAHCHSKGVYH 132
                ++  + ++L  + GG+L   I H G+    E     Y  ++   +   H + + +
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAAD 192
           RDLKPEN+LLD +G++++SD GL+    +G + +    GT  Y+APEV+ N  Y   + D
Sbjct: 310 RDLKPENILLDDHGHIRISDLGLAVHVPEG-QTIKGRVGTVGYMAPEVVKNERY-TFSPD 367

Query: 193 VWSCGVILFVLMAGYLPFGETDLPT----LYKKINAAEFSCPFWFSTGATSLIHKILDPN 248
            W+ G +L+ ++AG  PF +         + + +          FS  A SL  ++L  +
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKD 427

Query: 249 PKTRI-----RIEGIRKHPWFR 265
           P  R+         +++HP F+
Sbjct: 428 PAERLGCRGGSAREVKEHPLFK 449

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  191 bits (487), Expect = 1e-58
 Identities = 54/288 (18%), Positives = 98/288 (34%), Gaps = 33/288 (11%)

Query: 4   QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           ++R   ++     IG G F  V     R  G   A+K   K         + ++   +  
Sbjct: 6   KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA 65

Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL----ENDCRRYFQQLI 119
            + +H ++VR     A    + I  E+  GG L D I    R++    E + +    Q+ 
Sbjct: 66  VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNL-------------------KVSDFGLSALPQ 160
             + + HS  + H D+KP N+ +                         K+ D G      
Sbjct: 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR-- 183

Query: 161 QGVELLHTTCGTPNYVAPEVLS-NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY 219
             +       G   ++A EVL  N  +    AD+++  + +             D    +
Sbjct: 184 --ISSPQVEEGDSRFLANEVLQENYTHL-PKADIFALALTVVCAAGAEPLPRNGD---QW 237

Query: 220 KKINAAEFS-CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
            +I        P   S   T L+  ++ P+P+ R     + KH     
Sbjct: 238 HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  183 bits (467), Expect = 2e-55
 Identities = 67/328 (20%), Positives = 110/328 (33%), Gaps = 74/328 (22%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAM-------------------KVLAK------ 44
            +E  + +G G F  V  A+N+    + A+                   K LAK      
Sbjct: 7   DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66

Query: 45  ------------------------------STILKHRMVDQIKREISIMKIVRHPNIVRL 74
                                           +     +D    +I  M      N V  
Sbjct: 67  VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEND---CRRYFQQLIDAVAHCHSKGVY 131
            +  + +  +YI ++      L D +  +  L + +   C   F Q+ +AV   HSKG+ 
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLM 186

Query: 132 HRDLKPENLLLDSYGNLKVSDFGLSAL------------PQQGVELLHTTCGTPNYVAPE 179
           HRDLKP N+       +KV DFGL               P           GT  Y++PE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW-FSTGAT 238
            +    Y     D++S G+ILF L+  Y    + +   +   +   +F   F        
Sbjct: 247 QIHGNNYS-HKVDIFSLGLILFELL--YSFSTQMERVRIITDVRNLKFPLLFTQKYPQEH 303

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRK 266
            ++  +L P+P  R     I ++  F  
Sbjct: 304 MMVQDMLSPSPTERPEATDIIENAIFEN 331

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  180 bits (458), Expect = 2e-54
 Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 15/264 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
              +G+GT+  V   ++      +A+K +        R    +  EI++ K ++H NIV+
Sbjct: 27  RVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHLKHKNIVQ 83

Query: 74  LHEVLASRTKVYIILEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGV 130
                +    + I +E V GG L   +  +    +  E     Y +Q+++ + + H   +
Sbjct: 84  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143

Query: 131 YHRDLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL--SNRGYD 187
            HRD+K +N+L+++Y G LK+SDFG S           T  GT  Y+APE++    RGY 
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY- 202

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPT--LYKKINAAEFSCPF--WFSTGATSLIHK 243
           G AAD+WS G  +  +  G  PF E   P   ++ K+   +         S  A + I K
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF-KVGMFKVHPEIPESMSAEAKAFILK 261

Query: 244 ILDPNPKTRIRIEGIRKHPWFRKN 267
             +P+P  R     +    + + +
Sbjct: 262 CFEPDPDKRACANDLLVDEFLKVS 285

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  180 bits (460), Expect = 4e-54
 Identities = 81/321 (25%), Positives = 129/321 (40%), Gaps = 70/321 (21%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL--------AKSTILKHRMVDQIK 57
           + + KYE    +GEG++  V   +N++TG  VA+K           K   +         
Sbjct: 22  QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM--------- 72

Query: 58  REISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYF 115
           REI ++K +RH N+V L EV   + + Y++ EFV     +  +       L     ++Y 
Sbjct: 73  REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLEL--FPNGLDYQVVQKYL 130

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPN 174
            Q+I+ +  CHS  + HRD+KPEN+L+   G +K+ DFG +  L   G            
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD------- 183

Query: 175 YV------APEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYK--KI- 222
            V      APE+L  +  Y G A DVW+ G ++  +  G    P G++D+  LY      
Sbjct: 184 EVATRWYRAPELLVGDVKY-GKAVDVWAIGCLVTEMFMGEPLFP-GDSDIDQLYHIMMCL 241

Query: 223 ---------------NAAEFSCPFW------------FSTGATSLIHKILDPNPKTRIRI 255
                            A    P               S     L  K L  +P  R   
Sbjct: 242 GNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFC 301

Query: 256 EGIRKHPWFRKNYNPVKCSEE 276
             +  H +F+ +    + S+E
Sbjct: 302 AELLHHDFFQMDGFAERFSQE 322

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  181 bits (460), Expect = 4e-54
 Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 18/265 (6%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
           V        +G G+F +V   ++++TG   A+K +        R+      E+     + 
Sbjct: 57  VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKV--------RLEVFRVEELVACAGLS 108

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P IV L+  +     V I +E + GG L   I   G L E+    Y  Q ++ + + H+
Sbjct: 109 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHT 168

Query: 128 KGVYHRDLKPENLLLDSYGNL-KVSDFGLSA-----LPQQGVELLHTTCGTPNYVAPEVL 181
           + + H D+K +N+LL S G+   + DFG +         + +       GT  ++APEV+
Sbjct: 169 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYK--KINAAEFSCPFWFSTGAT 238
             +  D +  D+WS   ++  ++ G  P+ +    P   K           P   +    
Sbjct: 229 MGKPCD-AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA 287

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPW 263
             I + L   P  R     +R+   
Sbjct: 288 QAIQEGLRKEPVHRASAMELRRKVG 312

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  178 bits (455), Expect = 1e-53
 Identities = 80/317 (25%), Positives = 131/317 (41%), Gaps = 70/317 (22%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL--------AKSTILKHRMVDQIKREIS 61
           KYE    IGEG++  V   +NR+TG+ VA+K           K   L         REI 
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL---------REIR 54

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYFQQLI 119
           ++K ++HPN+V L EV   + +++++ E+         D+  +Q  + E+  +    Q +
Sbjct: 55  MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTL 112

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYV-- 176
            AV  CH     HRD+KPEN+L+  +  +K+ DFG +  L        +      + V  
Sbjct: 113 QAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLL---TGPSDYYD----DEVAT 165

Query: 177 ----APEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYK--KI----- 222
               +PE+L  +  Y G   DVW+ G +   L++G    P G++D+  LY   K      
Sbjct: 166 RWYRSPELLVGDTQY-GPPVDVWAIGCVFAELLSGVPLWP-GKSDVDQLYLIRKTLGDLI 223

Query: 223 -----------NAAEFSCPFW------------FSTGATSLIHKILDPNPKTRIRIEGIR 259
                        +    P               S  A  L+   L  +P  R+  E + 
Sbjct: 224 PRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLL 283

Query: 260 KHPWFRKNYNPVKCSEE 276
            HP+F         ++E
Sbjct: 284 HHPYFENIREIEDLAKE 300

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  179 bits (456), Expect = 2e-53
 Identities = 79/314 (25%), Positives = 126/314 (40%), Gaps = 76/314 (24%)

Query: 5   TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK------- 57
             R  +YE    +GEG FA V  A+++ T + VA+K        K ++  + +       
Sbjct: 6   KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIK--------KIKLGHRSEAKDGINR 57

Query: 58  ---REISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCR 112
              REI +++ + HPNI+ L +    ++ + ++ +F+      +     +   L  +  +
Sbjct: 58  TALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD--NSLVLTPSHIK 115

Query: 113 RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT 172
            Y    +  + + H   + HRDLKP NLLLD  G LK++DFGL+            + G+
Sbjct: 116 AYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLA-----------KSFGS 164

Query: 173 PN-----------YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDL--- 215
           PN           Y APE+L   R Y G   D+W+ G IL  L+    +LP G++DL   
Sbjct: 165 PNRAYTHQVVTRWYRAPELLFGARMY-GVGVDMWAVGCILAELLLRVPFLP-GDSDLDQL 222

Query: 216 ---------PT--------------LYKKINAAEFSCPF-WFSTGATSLIHKILDPNPKT 251
                    PT               +K          F         LI  +   NP  
Sbjct: 223 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 282

Query: 252 RIRIEGIRKHPWFR 265
           RI      K  +F 
Sbjct: 283 RITATQALKMKYFS 296

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  173 bits (442), Expect = 6e-52
 Identities = 91/307 (29%), Positives = 132/307 (42%), Gaps = 69/307 (22%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--------RE 59
           + KYE    IGEGT+  V  A+NRET E VA+K        + R+ D           RE
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALK--------RVRL-DDDDEGVPSSALRE 51

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYFQQ 117
           I ++K ++H NIVRLH+VL S  K+ ++ EF      + FD     G L     + +  Q
Sbjct: 52  ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQ 109

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGVELLHTTCGTPN 174
           L+  +  CHS+ V HRDLKP+NLL++  G LK+++FGL+    +P +        C +  
Sbjct: 110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR--------CYSAE 161

Query: 175 -----YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDL----------- 215
                Y  P+VL   + Y  ++ D+WS G I   L     P   G               
Sbjct: 162 VVTLWYRPPDVLFGAKLY-STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220

Query: 216 -PT-----------LYKKINAAEFSCPF-----WFSTGATSLIHKILDPNPKTRIRIEGI 258
            PT            YK       +          +     L+  +L  NP  RI  E  
Sbjct: 221 TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

Query: 259 RKHPWFR 265
            +HP+F 
Sbjct: 281 LQHPYFS 287

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  170 bits (432), Expect = 3e-50
 Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 78/313 (24%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------- 57
             + KY+    +GEGT+  V  A++   G  VA+K        + R+ D           
Sbjct: 18  GLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALK--------RIRL-DAEDEGIPSTAI 67

Query: 58  REISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYF 115
           REIS++K + HPNIV L +V+ S   + ++ EF+     ++ D+  ++  L ++  + Y 
Sbjct: 68  REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYL 125

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN- 174
            QL+  VAHCH   + HRDLKP+NLL++S G LK++DFGL+              G P  
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA-----------RAFGIPVR 174

Query: 175 ----------YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYK- 220
                     Y AP+VL  ++ Y  ++ D+WS G I   ++ G    P G TD   L K 
Sbjct: 175 SYTHEVVTLWYRAPDVLMGSKKY-STSVDIWSIGCIFAEMITGKPLFP-GVTDDDQLPKI 232

Query: 221 -KI----------------NAAEFSCPFW-----------FSTGATSLIHKILDPNPKTR 252
             I                   + +   +           F      L+  +L  +P  R
Sbjct: 233 FSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR 292

Query: 253 IRIEGIRKHPWFR 265
           I       HP+F+
Sbjct: 293 ISARDAMNHPYFK 305

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  169 bits (431), Expect = 7e-50
 Identities = 72/321 (22%), Positives = 127/321 (39%), Gaps = 79/321 (24%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--- 57
                  + +Y     +GEGT+ +V  A +  T E+VA+K        + R+ +  +   
Sbjct: 26  AAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIK--------RIRL-EHEEEGV 76

Query: 58  -----REISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCR 112
                RE+S++K ++H NI+ L  V+    ++++I E+    +L   +     +     +
Sbjct: 77  PGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIK 135

Query: 113 RYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-----GNLKVSDFGLSALPQQGVELLH 167
            +  QLI+ V  CHS+   HRDLKP+NLLL          LK+ DFGL+           
Sbjct: 136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA----------- 184

Query: 168 TTCGTPN-----------YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGET 213
              G P            Y  PE+L  +R Y  ++ D+WS   I   ++      P G++
Sbjct: 185 RAFGIPIRQFTHEIITLWYRPPEILLGSRHY-STSVDIWSIACIWAEMLMKTPLFP-GDS 242

Query: 214 DLPTLYK-----------------------------KINAAEFSCPFWFSTGATSLIHKI 244
           ++  L+K                             +    +             L+  +
Sbjct: 243 EIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAM 302

Query: 245 LDPNPKTRIRIEGIRKHPWFR 265
           L+ +P  RI  +   +HP+F 
Sbjct: 303 LEMDPVKRISAKNALEHPYFS 323

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  167 bits (426), Expect = 1e-49
 Identities = 60/263 (22%), Positives = 116/263 (44%), Gaps = 15/263 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR 73
              IG G+F  V    + ET   VA   L    + K     + K E  ++K ++HPNIVR
Sbjct: 31  DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVR 89

Query: 74  LH----EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
            +      +  +  + ++ E +T G L   +     +     R + +Q++  +   H++ 
Sbjct: 90  FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149

Query: 130 --VYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
             + HRDLK +N+ +    G++K+ D GL+ L +          GTP ++APE+     Y
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYEE-KY 206

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINAAE--FSCPFWFSTGATSLIHK 243
           D  + DV++ G+ +  +     P+ E  +   +Y+++ +     S           +I  
Sbjct: 207 D-ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265

Query: 244 ILDPNPKTRIRIEGIRKHPWFRK 266
            +  N   R  I+ +  H +F++
Sbjct: 266 CIRQNKDERYSIKDLLNHAFFQE 288

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  168 bits (428), Expect = 2e-49
 Identities = 83/317 (26%), Positives = 128/317 (40%), Gaps = 79/317 (24%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL-------AKSTILKHRMVDQIKRE 59
             ++++    +G GT+A V    N+ TG  VA+K +         ST +         RE
Sbjct: 3   SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI---------RE 53

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGG-----ELFDKIVHQGRLLENDCRRY 114
           IS+MK ++H NIVRL++V+ +  K+ ++ EF+        +          L  N  + +
Sbjct: 54  ISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113

Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN 174
             QL+  +A CH   + HRDLKP+NLL++  G LK+ DFGL+              G P 
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA-----------RAFGIPV 162

Query: 175 -----------YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLP----------- 209
                      Y AP+VL  +R Y  ++ D+WSCG IL  ++ G    P           
Sbjct: 163 NTFSSEVVTLWYRAPDVLMGSRTY-STSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221

Query: 210 F------------GETDLP------TLYKKINAAEF---SCPFWFSTGATSLIHKILDPN 248
           F              T LP            +  +                 +H +L  N
Sbjct: 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN 281

Query: 249 PKTRIRIEGIRKHPWFR 265
           P  R+  +    HPWF 
Sbjct: 282 PDMRLSAKQALHHPWFA 298

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  167 bits (425), Expect = 2e-49
 Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 69/306 (22%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--------RE 59
           + KY     IGEGT+  V  AQN   GE+ A+K        K R+ ++          RE
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALK--------KIRL-EKEDEGIPSTTIRE 50

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYFQQ 117
           ISI+K ++H NIV+L++V+ ++ ++ ++ E +     +L D    +G L     + +  Q
Sbjct: 51  ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQ 108

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGVELLHTTCGTPN 174
           L++ +A+CH + V HRDLKP+NLL++  G LK++DFGL+    +P +          T  
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR--------KYTHE 160

Query: 175 -----YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLP-----------F----- 210
                Y AP+VL  ++ Y  +  D+WS G I   ++ G    P           F     
Sbjct: 161 IVTLWYRAPDVLMGSKKY-STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGT 219

Query: 211 -------GETDLP---TLYKKINAAEFSCPF-WFSTGATSLIHKILDPNPKTRIRIEGIR 259
                    T+LP     +       +             L+ K+L  +P  RI  +   
Sbjct: 220 PNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL 279

Query: 260 KHPWFR 265
           +H +F+
Sbjct: 280 EHAYFK 285

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  167 bits (425), Expect = 4e-49
 Identities = 73/310 (23%), Positives = 129/310 (41%), Gaps = 76/310 (24%)

Query: 8   VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL-------AKSTILKHRMVDQIKREI 60
           +  Y     +GEGT+A V   +++ T   VA+K +       A  T +         RE+
Sbjct: 1   METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI---------REV 51

Query: 61  SIMKIVRHPNIVRLHEVLASRTKVYIILEFVTG--GELFDKIVHQGRLLENDCRRYFQQL 118
           S++K ++H NIV LH+++ +   + ++ E++     +  D       +  ++ + +  QL
Sbjct: 52  SLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD--CGNIINMHNVKLFLFQL 109

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN---- 174
           +  +A+CH + V HRDLKP+NLL++  G LK++DFGL+                P     
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA-----------RAKSIPTKTYD 158

Query: 175 -------YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYK--KI 222
                  Y  P++L  +  Y  +  D+W  G I + +  G    P G T    L+   +I
Sbjct: 159 NEVVTLWYRPPDILLGSTDY-STQIDMWGVGCIFYEMATGRPLFP-GSTVEEQLHFIFRI 216

Query: 223 ----------------NAAEFSCPFW-----------FSTGATSLIHKILDPNPKTRIRI 255
                               ++ P +             +    L+ K+L    + RI  
Sbjct: 217 LGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISA 276

Query: 256 EGIRKHPWFR 265
           E   KHP+F 
Sbjct: 277 EDAMKHPFFL 286

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  166 bits (423), Expect = 2e-48
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 75/319 (23%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------- 57
             V+KYE    IG+GTF +V  A++R+TG+ VA+K        K  M +  K        
Sbjct: 14  DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALK--------KVLM-ENEKEGFPITAL 64

Query: 58  REISIMKIVRHPNIVRLHEVLASR--------TKVYIILEFV----TGGELFDKIVHQGR 105
           REI I+++++H N+V L E+  ++          +Y++ +F      G  L        +
Sbjct: 65  REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG--LLSN--VLVK 120

Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQG 162
              ++ +R  Q L++ + + H   + HRD+K  N+L+   G LK++DFGL+   +L +  
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS 180

Query: 163 VELLHTTC-GTPNYVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDL--- 215
               +T    T  Y  PE+L   R Y G   D+W  G I+  +      +  G T+    
Sbjct: 181 QPNRYTNRVVTLWYRPPELLLGERDY-GPPIDLWGAGCIMAEMWTRSPIMQ-GNTEQHQL 238

Query: 216 ---------PT-----------LYKKIN---------AAEFSCPFWFSTGATSLIHKILD 246
                     T           LY+K+                 +     A  LI K+L 
Sbjct: 239 ALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK-AYVRDPYALDLIDKLLV 297

Query: 247 PNPKTRIRIEGIRKHPWFR 265
            +P  RI  +    H +F 
Sbjct: 298 LDPAQRIDSDDALNHDFFW 316

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  163 bits (414), Expect = 1e-47
 Identities = 73/323 (22%), Positives = 115/323 (35%), Gaps = 86/323 (26%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------- 57
              ++YE    IG G +  V  A++  +G  VA+K          R+             
Sbjct: 6   MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--------SVRV-PNGGGGGGGLPI 56

Query: 58  ---REISIMK---IVRHPNIVRLHEVLASR-----TKVYIILEFVTG--GELFDKIVHQG 104
              RE+++++      HPN+VRL +V A+       KV ++ E V        DK    G
Sbjct: 57  STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG 116

Query: 105 RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE 164
            L     +   +Q +  +   H+  + HRDLKPEN+L+ S G +K++DFGL+        
Sbjct: 117 -LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA-------- 167

Query: 165 LLHTTCGTPN----------YVAPEVLSNRGYDGSAADVWSCGVILFVLMAG--YLPFGE 212
                               Y APEVL    Y  +  D+WS G I   +         G 
Sbjct: 168 ---RIYSYQMALTPVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFC-GN 222

Query: 213 TDLPTLYK-----------------KINAAEFSCPFW-----------FSTGATSLIHKI 244
           ++   L K                  +    F  P                    L+ ++
Sbjct: 223 SEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF--PPRGPRPVQSVVPEMEESGAQLLLEM 280

Query: 245 LDPNPKTRIRIEGIRKHPWFRKN 267
           L  NP  RI      +H +  K+
Sbjct: 281 LTFNPHKRISAFRALQHSYLHKD 303

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  160 bits (408), Expect = 8e-47
 Identities = 69/207 (33%), Positives = 102/207 (49%), Gaps = 11/207 (5%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +   IG G+F  V  A+    G  VA+K+L          V++  RE++IMK +RHPNI
Sbjct: 40  NIKEKIGAGSFGTVHRAEWH--GSDVAVKIL-MEQDFHAERVNEFLREVAIMKRLRHPNI 96

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA------HC 125
           V     +     + I+ E+++ G L+  +   G   + D RR      D VA      H 
Sbjct: 97  VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD-VAKGMNYLHN 155

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
            +  + HR+LK  NLL+D    +KV DFGLS L         +  GTP ++APEVL +  
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGE 212
            +   +DV+S GVIL+ L     P+G 
Sbjct: 216 SN-EKSDVYSFGVILWELATLQQPWGN 241

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  159 bits (404), Expect = 3e-46
 Identities = 72/257 (28%), Positives = 108/257 (42%), Gaps = 35/257 (13%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           EV   +G G F  V  A+ R   + VA+K +   +  K         E+  +  V HPNI
Sbjct: 11  EVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESESERK-----AFIVELRQLSRVNHPNI 63

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID---AVAHCHS- 127
           V+L    A    V +++E+  GG L++ +     L            +     VA+ HS 
Sbjct: 64  VKL--YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121

Query: 128 --KGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
             K + HRDLKP NLLL + G  LK+ DFG +   Q     +    G+  ++APEV    
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---MTNNKGSAAWMAPEVFEGS 178

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---------SCPFWFST 235
            Y     DV+S G+IL+ ++    PF E   P    +I  A           + P     
Sbjct: 179 NYS-EKCDVFSWGIILWEVITRRKPFDEIGGPAF--RIMWAVHNGTRPPLIKNLPKPIE- 234

Query: 236 GATSLIHKILDPNPKTR 252
              SL+ +    +P  R
Sbjct: 235 ---SLMTRCWSKDPSQR 248

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  158 bits (402), Expect = 1e-45
 Identities = 79/310 (25%), Positives = 123/310 (39%), Gaps = 66/310 (21%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQN-RETGESVAMKVLAKSTILKHRMVDQIK------- 57
           R   +YE    IGEG + KV  A++ +  G  VA+K        + R+    +       
Sbjct: 8   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALK--------RVRV-QTGEEGMPLST 58

Query: 58  -REISIMK---IVRHPNIVRLHEVLASR-----TKVYIILEFVTG--GELFDKIVHQGRL 106
            RE+++++      HPN+VRL +V         TK+ ++ E V        DK+  +  +
Sbjct: 59  IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGV 117

Query: 107 LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
                +    QL+  +   HS  V HRDLKP+N+L+ S G +K++DFGL+       ++ 
Sbjct: 118 PTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR--IYSFQMA 175

Query: 167 HTTC-GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG--YLPFGETDLPTLYK--- 220
            T+   T  Y APEVL    Y  +  D+WS G I   +         G +D+  L K   
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFR-GSSDVDQLGKILD 233

Query: 221 --------------KINAAEFSCPFW-----------FSTGATSLIHKILDPNPKTRIRI 255
                          +    F                       L+ K L  NP  RI  
Sbjct: 234 VIGLPGEEDWPRDVALPRQAF--HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291

Query: 256 EGIRKHPWFR 265
                HP+F+
Sbjct: 292 YSALSHPYFQ 301

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  156 bits (396), Expect = 5e-45
 Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 31/220 (14%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
             G  +G+G F +     +RETGE + MK L +             +E+ +M+ + HPN+
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD---EETQRTFLKEVKVMRCLEHPNV 69

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLID-------AVAH 124
           ++   VL    ++  I E++ GG L   I              + Q +         +A+
Sbjct: 70  LKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP------WSQRVSFAKDIASGMAY 123

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH--------------TTC 170
            HS  + HRDL   N L+    N+ V+DFGL+ L                       T  
Sbjct: 124 LHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183

Query: 171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           G P ++APE+++ R YD    DV+S G++L  ++      
Sbjct: 184 GNPYWMAPEMINGRSYD-EKVDVFSFGIVLCEIIGRVNAD 222

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  155 bits (393), Expect = 1e-44
 Identities = 69/275 (25%), Positives = 124/275 (45%), Gaps = 27/275 (9%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +     IG+G+F +V    +  T + VA+K++          ++ I++EI+++     P 
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPY 81

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           + + +      TK++II+E++ GG   D ++  G L E       ++++  + + HS+  
Sbjct: 82  VTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKK 140

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            HRD+K  N+LL  +G +K++DFG++          +T  GTP ++APEV+    YD S 
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD-SK 199

Query: 191 ADVWSCGVILFVLMAGYLPFGET------------DLPTLYKKINAAEFSCPFWFSTGAT 238
           AD+WS G+    L  G  P  E             + PTL        +S P        
Sbjct: 200 ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGN-----YSKPL------K 248

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKC 273
             +   L+  P  R   + + KH +  +N      
Sbjct: 249 EFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  154 bits (391), Expect = 2e-44
 Identities = 66/266 (24%), Positives = 108/266 (40%), Gaps = 38/266 (14%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVL----AKSTILKHRMVDQIKREISIMKIVR 67
           E  + IG+G F  V   +  +    VA+K L    ++          + +RE+ IM  + 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA---- 123
           HPNIV+L           +++EFV  G+L+ +++ +   +        + ++D       
Sbjct: 82  HPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSVKLRLMLDIALGIEY 137

Query: 124 -HCHSKGVYHRDLKPENLLLDSYG-----NLKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
               +  + HRDL+  N+ L S         KV+DFGLS   QQ V  +    G   ++A
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS---QQSVHSVSGLLGNFQWMA 194

Query: 178 PEVLSNRG--YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------- 227
           PE +      Y    AD +S  +IL+ ++ G  PF E       K IN            
Sbjct: 195 PETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYS-YGKIKFINMIREEGLRPTIP 252

Query: 228 -SCPFWFSTGATSLIHKILDPNPKTR 252
             CP        ++I      +PK R
Sbjct: 253 EDCPPRLR----NVIELCWSGDPKKR 274

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  157 bits (400), Expect = 2e-44
 Identities = 83/301 (27%), Positives = 130/301 (43%), Gaps = 49/301 (16%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y   + IG G+F  V  A+  ++GE VA+K   K  +L+ +      RE+ IM+ + H 
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK---K--VLQDKR--FKNRELQIMRKLDHC 107

Query: 70  NIVRLHEVLASRT------KVYIILEFV--TGGELFDKIVHQGRLLEND-CRRYFQQLID 120
           NIVRL     S         + ++L++V  T   +        + L     + Y  QL  
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G   +   C +  Y APE
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC-SRYYRAPE 226

Query: 180 V-LSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKI--------------- 222
           +      Y  S+ DVWS G +L  L+ G   F G++ +  L + I               
Sbjct: 227 LIFGATDYT-SSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMN 285

Query: 223 -NAAEFSCPFW------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN 269
            N  EF  P                  A +L  ++L+  P  R+       H +F +  +
Sbjct: 286 PNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 345

Query: 270 P 270
           P
Sbjct: 346 P 346

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  150 bits (381), Expect = 3e-43
 Identities = 42/211 (19%), Positives = 84/211 (39%), Gaps = 20/211 (9%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
                + E    ++   + +  G  + +KVL K      R       E   ++I  HPN+
Sbjct: 13  NFLTKLNENHSGELWKGRWQ--GNDIVVKVL-KVRDWSTRKSRDFNEECPRLRIFSHPNV 69

Query: 72  VRLHEVLAS--RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA------ 123
           + +     S       +I  ++  G L++ ++H+G     D  +  +  +D +A      
Sbjct: 70  LPVLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKFALD-MARGMAFL 127

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           H     +    L   ++++D     ++S   +    Q            P +VAPE L  
Sbjct: 128 HTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-----GRMYAPAWVAPEALQK 182

Query: 184 RGYDGS--AADVWSCGVILFVLMAGYLPFGE 212
           +  D +  +AD+WS  V+L+ L+   +PF +
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFAD 213

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  151 bits (384), Expect = 2e-42
 Identities = 84/295 (28%), Positives = 128/295 (43%), Gaps = 50/295 (16%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y   + IG G+F  V  A+  E+ E VA+K   K  +L+ +      RE+ IM+IV+HP
Sbjct: 41  AYTNCKVIGNGSFGVVFQAKLVESDE-VAIK---K--VLQDK--RFKNRELQIMRIVKHP 92

Query: 70  NIVRLHEVLASRT------KVYIILEFV--TGGELFDKIVHQGRLLEND-CRRYFQQLID 120
           N+V L     S         + ++LE+V  T            + +     + Y  QL+ 
Sbjct: 93  NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           ++A+ HS G+ HRD+KP+NLLLD   G LK+ DFG + +   G   +   C +  Y APE
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYIC-SRYYRAPE 211

Query: 180 V-LSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKI--------------- 222
           +      Y  +  D+WS G ++  LM G   F GE+ +  L + I               
Sbjct: 212 LIFGATNYT-TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270

Query: 223 -NAAEFSCPFW------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
            N  E   P                  A  LI ++L+  P  R+       HP+F
Sbjct: 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  148 bits (376), Expect = 6e-42
 Identities = 70/260 (26%), Positives = 136/260 (52%), Gaps = 8/260 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
             +    IGEG+   V  A+ + +G  VA+K++    + K +  + +  E+ IM+  +H 
Sbjct: 46  LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQHF 102

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           N+V +++      ++++++EF+ GG L D IV Q RL E       + ++ A+A+ H++G
Sbjct: 103 NVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQG 161

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRD+K +++LL   G +K+SDFG  A   + V    +  GTP ++APEV+S   Y  +
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYA-T 220

Query: 190 AADVWSCGVILFVLMAGYLP-FGETDLPTLYK--KINAAEFSCPFWFSTGATSLIHKILD 246
             D+WS G+++  ++ G  P F ++ +  + +       +       S      + ++L 
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV 280

Query: 247 PNPKTRIRIEGIRKHPWFRK 266
            +P+ R   + +  HP+  +
Sbjct: 281 RDPQERATAQELLDHPFLLQ 300

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  148 bits (376), Expect = 1e-41
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 6/243 (2%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E    +G G    V    ++ +G  +A K++      K  + +QI RE+ ++     P 
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPY 92

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG- 129
           IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K  
Sbjct: 93  IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 152

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRD+KP N+L++S G +K+ DFG+S   Q    + ++  GT +Y++PE L    Y   
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFGVSG--QLIDSMANSFVGTRSYMSPERLQGTHYS-V 209

Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
            +D+WS G+ L  +  G  P    D   L                    +    +     
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM 269

Query: 250 KTR 252
            +R
Sbjct: 270 DSR 272

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  147 bits (372), Expect = 1e-41
 Identities = 68/260 (26%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +    + +    + I  EI +M+  ++P
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNP 77

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRD+K +N+LL   G++K++DFG  A          T  GTP ++APEV++ + Y   
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPK 196

Query: 190 AADVWSCGVILFVLMAGYLP-FGETDLPTLYK--KINAAEFSCPFWFSTGATSLIHKILD 246
             D+WS G++   ++ G  P   E  L  LY        E   P   S      +++ L+
Sbjct: 197 -VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLE 255

Query: 247 PNPKTRIRIEGIRKHPWFRK 266
            + + R   + + +H + + 
Sbjct: 256 MDVEKRGSAKELLQHQFLKI 275

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  146 bits (371), Expect = 2e-41
 Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 13/266 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +E+   +G+G F KV  A+N+ETG   A KV+   +  +   ++    EI I+    HP
Sbjct: 20  VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE---LEDYIVEIEILATCDHP 76

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSK 128
            IV+L        K++I++EF  GG +   ++   R L     +   +Q+++A+   HSK
Sbjct: 77  YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV-----LSN 183
            + HRDLK  N+L+   G+++++DFG+SA   + ++   +  GTP ++APEV     + +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYK--KINAAEFSCPFWFSTGATSL 240
             YD   AD+WS G+ L  +     P  E + +  L K  K +      P  +S      
Sbjct: 197 TPYDYK-ADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDF 255

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFRK 266
           +   LD NP+TR     + +HP+   
Sbjct: 256 LKIALDKNPETRPSAAQLLEHPFVSS 281

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  146 bits (371), Expect = 3e-41
 Identities = 54/261 (20%), Positives = 104/261 (39%), Gaps = 29/261 (11%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           E+G  IG+G F +V   +       VA++++          +   KRE+   +  RH N+
Sbjct: 36  EIGELIGKGRFGQVYHGRWHGE---VAIRLI-DIERDNEDQLKAFKREVMAYRQTRHENV 91

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKGV 130
           V       S   + II     G  L+  +     +L+ +  R   Q+++  + + H+KG+
Sbjct: 92  VLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI 151

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLS-----ALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
            H+DLK +N+  D+ G + ++DFGL          +  + L    G   ++APE++    
Sbjct: 152 LHKDLKSKNVFYDN-GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLS 210

Query: 186 YDGS--------AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA------AEFSCPF 231
            D           +DV++ G I + L A   PF       +  ++        ++     
Sbjct: 211 PDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGK 270

Query: 232 WFSTGATSLIHKILDPNPKTR 252
             S     ++        + R
Sbjct: 271 EIS----DILLFCWAFEQEER 287

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  145 bits (367), Expect = 5e-41
 Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 10/204 (4%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            VG+ IG G+F  V   +       VA+K+L   T    + +   K E+ +++  RH NI
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD---VAVKML-NVTAPTPQQLQAFKNEVGVLRKTRHVNI 82

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKGV 130
           +      ++  ++ I+ ++  G  L+  +       E        +Q    + + H+K +
Sbjct: 83  LLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPEVLSNRGYD- 187
            HRDLK  N+ L     +K+ DFGL+    +           G+  ++APEV+  +  + 
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201

Query: 188 -GSAADVWSCGVILFVLMAGYLPF 210
               +DV++ G++L+ LM G LP+
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPY 225

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  146 bits (370), Expect = 6e-41
 Identities = 76/299 (25%), Positives = 128/299 (42%), Gaps = 56/299 (18%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-H 68
            Y++ R +G G +++V  A N    E V +K      ILK     +IKREI I++ +R  
Sbjct: 37  DYQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKKKIKREIKILENLRGG 90

Query: 69  PNIVRLHEVL---ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           PNI+ L +++    SRT   +  E V   +   K ++Q  L + D R Y  +++ A+ +C
Sbjct: 91  PNIITLADIVKDPVSRTPALVF-EHVNNTDF--KQLYQ-TLTDYDIRFYMYEILKALDYC 146

Query: 126 HSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL-SN 183
           HS G+ HRD+KP N+++D  +  L++ D+GL+     G E       +  +  PE+L   
Sbjct: 147 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV-RVASRYFKGPELLVDY 205

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF--------------------GETDLPTLYKKIN 223
           + YD  + D+WS G +L  ++    PF                       D    Y    
Sbjct: 206 QMYD-YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 264

Query: 224 AAEF--SCPFW----------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
              F                        S  A   + K+L  + ++R+      +HP+F
Sbjct: 265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  145 bits (368), Expect = 8e-41
 Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 35/311 (11%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHP 69
            E    +G GT  +V   + R+TG  +A+K + +S         +I  ++ + +K    P
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG--NKEENKRILMDLDVVLKSHDCP 84

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK- 128
            IV+      + T V+I +E +       K   QG + E    +    ++ A+ +   K 
Sbjct: 85  YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH 144

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH-----TTCGTPNYVAPEVL-- 181
           GV HRD+KP N+LLD  G +K+ DFG+S        L+       + G   Y+APE +  
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISG------RLVDDKAKDRSAGCAAYMAPERIDP 198

Query: 182 ---SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKI---NAAEFSCPFWFS 234
              +   YD   ADVWS G+ L  L  G  P+        +  K+             FS
Sbjct: 199 PDPTKPDYD-IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS 257

Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQ 294
               S +   L  + + R +   + +H + ++        E  EV   DV + F D+  +
Sbjct: 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR-------YETLEV---DVASWFKDVMAK 307

Query: 295 YVAEQSENKVG 305
             + +S    G
Sbjct: 308 TESPRSGPSSG 318

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  145 bits (367), Expect = 8e-41
 Identities = 71/262 (27%), Positives = 131/262 (50%), Gaps = 12/262 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            ++V   +GEG++  V  A ++ETG+ VA+K +     ++   + +I +EISIM+    P
Sbjct: 30  VFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP----VESD-LQEIIKEISIMQQCDSP 84

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           ++V+ +      T ++I++E+   G + D I +    L E++     Q  +  + + H  
Sbjct: 85  HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
              HRD+K  N+LL++ G+ K++DFG++      +   +T  GTP ++APEV+   GY+ 
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNC 204

Query: 189 SAADVWSCGVILFVLMAGYLP--FGETDLPTLYK--KINAAEFSCPFWFSTGATSLIHKI 244
             AD+WS G I  + MA   P       +  ++         F  P  +S   T  + + 
Sbjct: 205 V-ADIWSLG-ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQC 262

Query: 245 LDPNPKTRIRIEGIRKHPWFRK 266
           L  +P+ R     + +HP+ R 
Sbjct: 263 LVKSPEQRATATQLLQHPFVRS 284

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  142 bits (361), Expect = 2e-40
 Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 24/216 (11%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREISIMKIVRHPN 70
            +   IG G F KV  A     G+ VA+K           + ++ +++E  +  +++HPN
Sbjct: 10  TLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA---VAHCHS 127
           I+ L  V      + +++EF  GG L   ++   R+            +     + + H 
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNR-VLSGKRI---PPDILVNWAVQIARGMNYLHD 123

Query: 128 KGVY---HRDLKPENLLLDSYG--------NLKVSDFGLSALPQQGVELLHTTCGTPNYV 176
           + +    HRDLK  N+L+             LK++DFGL+    +  ++  +  G   ++
Sbjct: 124 EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM--SAAGAYAWM 181

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE 212
           APEV+    +    +DVWS GV+L+ L+ G +PF  
Sbjct: 182 APEVIRASMFS-KGSDVWSYGVLLWELLTGEVPFRG 216

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  139 bits (353), Expect = 7e-39
 Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 3/215 (1%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y++   +G G  + V  A++      VA+K +      K   + + +RE+     + H N
Sbjct: 13  YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IV + +V       Y+++E++ G  L + I   G L  +    +  Q++D + H H   +
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI 132

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
            HRD+KP+N+L+DS   LK+ DFG++ AL +  +   +   GT  Y +PE  +       
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKGEATDE 191

Query: 190 AADVWSCGVILFVLMAGYLPF-GETDLPTLYKKIN 223
             D++S G++L+ ++ G  PF GET +    K I 
Sbjct: 192 CTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ 226

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  140 bits (354), Expect = 7e-39
 Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 35/284 (12%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKIVRH 68
           YE+   IG G  A V+ A      E VA+K   L K        +D++ +EI  M    H
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT----SMDELLKEIQAMSQCHH 72

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV------ 122
           PNIV  +     + +++++++ ++GG + D I H     E+      +  I  +      
Sbjct: 73  PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132

Query: 123 --AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL-----HTTCGTPNY 175
              + H  G  HRD+K  N+LL   G+++++DFG+SA    G ++       T  GTP +
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192

Query: 176 VAPEVLS-NRGYDGSAADVWSCGVILFVLMAGYLPFGET------------DLPTLYKKI 222
           +APEV+   RGYD   AD+WS G+    L  G  P+ +             D P+L  + 
Sbjct: 193 MAPEVMEQVRGYD-FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL--ET 249

Query: 223 NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
              +      +      +I   L  +P+ R     + +H +F+K
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  140 bits (354), Expect = 1e-38
 Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 8/192 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +   R IG G+F  V FA++    E VA+K ++ S    +     I +E+  ++ +RHP
Sbjct: 55  LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 114

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           N ++           ++++E+  G       VH+  L E +        +  +A+ HS  
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 174

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR---GY 186
           + HRD+K  N+LL   G +K+ DFG +++        ++  GTP ++APEV+       Y
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQY 230

Query: 187 DGSAADVWSCGV 198
           DG   DVWS G+
Sbjct: 231 DGK-VDVWSLGI 241

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  139 bits (353), Expect = 4e-38
 Identities = 82/333 (24%), Positives = 128/333 (38%), Gaps = 81/333 (24%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY +G+T+G G+F  V    + E+G+  A+K   K             RE+ IMK++ H 
Sbjct: 8   KYSLGKTLGTGSFGIVCEVFDIESGKRFALK---KVLQDPRY----KNRELDIMKVLDHV 60

Query: 70  NIVRLHEVLASRTK--------------------------------------VYIILEFV 91
           NI++L +   +                                         + +I+E+V
Sbjct: 61  NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120

Query: 92  --TGGELFDKIVHQGRLLEND-CRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GN 147
             T  ++    +  GR +  +    Y  QL  AV   HS G+ HRD+KP+NLL++S    
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180

Query: 148 LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV-LSNRGYDGSAADVWSCGVILFVLMAG 206
           LK+ DFG +         +   C +  Y APE+ L    Y   + D+WS G +   L+ G
Sbjct: 181 LKLCDFGSAKKLIPSEPSVAYIC-SRFYRAPELMLGATEYT-PSIDLWSIGCVFGELILG 238

Query: 207 YLPF-GETDLPTLYKKI----------------NAAEFSCPFW----FS--------TGA 237
              F GET +  L + I                +  E   P      +         + A
Sbjct: 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLA 298

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             L+ +IL   P  RI       HP+F    N 
Sbjct: 299 IDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS 331

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  137 bits (348), Expect = 7e-38
 Identities = 71/303 (23%), Positives = 124/303 (40%), Gaps = 55/303 (18%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHP 69
            +    IG G +  V    ++ +G+ +A+K +   + +  +   Q+  ++ + M+    P
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCP 81

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV------HQGRLLENDCRRYFQQLIDAVA 123
            IV+ +  L      +I +E ++    FDK            + E    +     + A+ 
Sbjct: 82  YIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139

Query: 124 HCHSKG-VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT-----TCGTPNYVA 177
           H      + HRD+KP N+LLD  GN+K+ DFG+S       +L+ +       G   Y+A
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG------QLVDSIAKTRDAGCRPYMA 193

Query: 178 PEVL----SNRGYDGSAADVWSCGVILFVLMAGYLPFGET-------------DLPTLYK 220
           PE +    S +GYD   +DVWS G+ L+ L  G  P+ +              D P L  
Sbjct: 194 PERIDPSASRQGYD-VRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQL-S 251

Query: 221 KINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVN 280
                EFS  F       + ++  L  +   R + + + KHP+           EE  V 
Sbjct: 252 NSEEREFSPSF------INFVNLCLTKDESKRPKYKELLKHPFILM-------YEERAVE 298

Query: 281 LDD 283
           +  
Sbjct: 299 VAC 301

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  139 bits (352), Expect = 9e-38
 Identities = 67/334 (20%), Positives = 120/334 (35%), Gaps = 78/334 (23%)

Query: 2   KKQTRRVAKYEV-GRTIGEGTFAKVRFAQNRE--TGESVAMKVLAKSTILKHRMVDQIKR 58
            ++ R    +E  G  +G GT+  V  A+ ++    +  A+K +  + I          R
Sbjct: 13  SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-----MSACR 67

Query: 59  EISIMKIVRHPNIVRLHEVLASRT--KVYIILEFV--------TGGELFDKIVHQGRLLE 108
           EI++++ ++HPN++ L +V  S    KV+++ ++                      +L  
Sbjct: 68  EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127

Query: 109 NDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN----LKVSDFGLSALPQQGVE 164
              +    Q++D + + H+  V HRDLKP N+L+   G     +K++D G + L      
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL--FNSP 185

Query: 165 LLHTTCGTPN-----YVAPEVL-SNRGYDGSAADVWSCGVILFVLMAG------------ 206
           L       P      Y APE+L   R Y   A D+W+ G I   L+              
Sbjct: 186 LKPLADLDPVVVTFWYRAPELLLGARHY-TKAIDIWAIGCIFAELLTSEPIFHCRQEDIK 244

Query: 207 -----------------------------YLPFGETDLPTLYKKINAAEFSCPF------ 231
                                         +P   T +    +          +      
Sbjct: 245 TSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304

Query: 232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
              + A  L+ K+L  +P  RI  E   + P+F 
Sbjct: 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFL 338

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  137 bits (346), Expect = 2e-37
 Identities = 72/288 (25%), Positives = 132/288 (45%), Gaps = 33/288 (11%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHP 69
           +E+   +G GT+ +V   ++ +TG+  A+KV+     +     ++IK+EI+++K    H 
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81

Query: 70  NIVRLHE------VLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDA 121
           NI   +             ++++++EF   G + D  K      L E       ++++  
Sbjct: 82  NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
           ++H H   V HRD+K +N+LL     +K+ DFG+SA   + V   +T  GTP ++APEV+
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVI 201

Query: 182 -----SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYK-------KINAAEFS 228
                 +  YD   +D+WS G+    +  G  P  +   +  L+        ++ + ++S
Sbjct: 202 ACDENPDATYD-FKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWS 260

Query: 229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEE 276
             F       S I   L  N   R   E + KHP+ R   N  +   +
Sbjct: 261 KKF------QSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQ 302

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  136 bits (344), Expect = 2e-37
 Identities = 54/214 (25%), Positives = 100/214 (46%), Gaps = 11/214 (5%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVL----AKSTILKHRMVDQIKREIS 61
            +   Y + R +G G    V  A++      VA+K++    +   + + RM    +RE  
Sbjct: 31  TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRM----QREAR 86

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
               ++ P++V +H+      ++Y+ +  + G +L   +  QG L         +Q+  A
Sbjct: 87  TAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSA 146

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGVELLHTTCGTPNYVAPEV 180
           +   H+ G  HRD+KPEN+L+ +     + DFG+ SA   + +  L  T GT  Y+APE 
Sbjct: 147 LDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPER 206

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPF-GET 213
            S        AD+++   +L+  + G  P+ G+ 
Sbjct: 207 FSESHATY-RADIYALTCVLYECLTGSPPYQGDQ 239

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  137 bits (347), Expect = 2e-37
 Identities = 89/339 (26%), Positives = 139/339 (41%), Gaps = 69/339 (20%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVRH 68
            +++   +GEG +  V  A ++ TGE VA+K   K       +      REI I+K  +H
Sbjct: 12  DFQLKSLLGEGAYGVVCSATHKPTGEIVAIK---KIEPFDKPLFALRTLREIKILKHFKH 68

Query: 69  PNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQ---GRLLENDCRRYFQ-QLI 119
            NI+ +  +    +      VYII E      L    +H+    ++L +D  +YF  Q +
Sbjct: 69  ENIITIFNIQRPDSFENFNEVYIIQE------LMQTDLHRVISTQMLSDDHIQYFIYQTL 122

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP---NY 175
            AV   H   V HRDLKP NLL++S  +LKV DFGL+  + +   +    T        +
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182

Query: 176 V------APEV-LSNRGYDGSAADVWSCGVILFVLMAG--------YL------------ 208
           V      APEV L++  Y   A DVWSCG IL  L           Y             
Sbjct: 183 VATRWYRAPEVMLTSAKYS-RAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGT 241

Query: 209 PFGETDLPTLYKKINAAEF--SCPFW----FST-------GATSLIHKILDPNPKTRIRI 255
           P  + DL  +     A E+  S P +                  L+ ++L  +P  RI  
Sbjct: 242 PHSDNDLRCIESP-RAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITA 300

Query: 256 EGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQ 294
           +   +HP+ +  ++P     +E        + F+    +
Sbjct: 301 KEALEHPYLQTYHDP----NDEPEGEPIPPSFFEFDHYK 335

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  138 bits (348), Expect = 2e-37
 Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 19/204 (9%)

Query: 10  KYEVGRTIGEG--TFAKVRFAQNRETGESVAMKV--LAKSTILKHRMVDQIKREISIMKI 65
            YE+   IG+G      V  A+ + TGE V ++   L   +   + MV  ++ E+ + K+
Sbjct: 26  CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS---NEMVTFLQGELHVSKL 82

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVA 123
             HPNIV       +  +++++  F+  G   D         + E       Q ++ A+ 
Sbjct: 83  FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALD 142

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQG------VELLHTTCGTPNYV 176
           + H  G  HR +K  ++L+   G + +S    +  +   G       +    +     ++
Sbjct: 143 YIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWL 202

Query: 177 APEVL--SNRGYDGSAADVWSCGV 198
           +PEVL  + +GYD + +D++S G+
Sbjct: 203 SPEVLQQNLQGYD-AKSDIYSVGI 225

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  135 bits (342), Expect = 4e-37
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 9/221 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP 
Sbjct: 14  YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73

Query: 71  IVRLHEV----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           IV +++       +    YI++E+V G  L D +  +G +              A+   H
Sbjct: 74  IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC--GTPNYVAPEVLSN 183
             G+ HRD+KP N+++ +   +KV DFG++ A+   G  +  T    GT  Y++PE  + 
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QAR 192

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKIN 223
                + +DV+S G +L+ ++ G  PF G++ +   Y+ + 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  136 bits (344), Expect = 5e-37
 Identities = 83/342 (24%), Positives = 142/342 (41%), Gaps = 65/342 (19%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI---V 66
           +++V R  G+GTF  V+  + + TG SVA+K   K  +++        RE+ IM+    +
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIK---K--VIQDPRFR--NRELQIMQDLAVL 76

Query: 67  RHPNIVRLHEVLASRTK-------VYIILEFV--TGGELFDKIVHQGRLLENDCRRYFQ- 116
            HPNIV+L     +  +       + +++E+V  T          +         + F  
Sbjct: 77  HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136

Query: 117 QLIDAVA--HCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
           QLI ++   H  S  V HRD+KP N+L++ + G LK+ DFG +         +   C + 
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC-SR 195

Query: 174 NYVAPEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDL------------PTL- 218
            Y APE+   N+ Y  +A D+WS G I   +M G   F G+               P+  
Sbjct: 196 YYRAPELIFGNQHYT-TAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSRE 254

Query: 219 -YKKINA--AEFSCPFW--------FSTG-------ATSLIHKILDPNPKTRIRIEGIRK 260
             +K+N    +              FS         A  L+  +L   P+ R++      
Sbjct: 255 VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314

Query: 261 HPWFRKNYNPVKCSEEEEVNLDDVHAV---FDDIEDQYVAEQ 299
           HP+F + ++P      +  N  D+      F   E + ++E 
Sbjct: 315 HPYFDELHDP----ATKLPNNKDLPEDLFRFLPNEIEVMSEA 352

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  134 bits (339), Expect = 7e-37
 Identities = 65/290 (22%), Positives = 118/290 (40%), Gaps = 37/290 (12%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHP 69
            E    +G G +  V   ++  +G+ +A+K +  +  +  +   ++  ++ I M+ V  P
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VNSQEQKRLLMDLDISMRTVDCP 66

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIV-----HQGRLLENDCRRYFQQLIDAVAH 124
             V  +  L     V+I +E +      DK           + E+   +    ++ A+ H
Sbjct: 67  FTVTFYGALFREGDVWICMELMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124

Query: 125 CHSKG-VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL-----HTTCGTPNYVAP 178
            HSK  V HRD+KP N+L+++ G +K+ DFG+S        L+         G   Y+AP
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG------YLVDDVAKDIDAGCKPYMAP 178

Query: 179 EVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETDLP--TLYKKINAAEFSCP-F 231
           E ++      GY    +D+WS G+ +  L     P+     P   L + +       P  
Sbjct: 179 ERINPELNQKGYS-VKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 237

Query: 232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
            FS        + L  N K R     + +HP+F          E +  ++
Sbjct: 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL-------HESKGTDV 280

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  136 bits (345), Expect = 2e-36
 Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 56/234 (23%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMK---------VLAKSTILKHRMVDQIKREI 60
           +YE+   IG G++  V  A ++     VA+K         +  K  +          REI
Sbjct: 54  RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRIL----------REI 103

Query: 61  SIMKIVRHPNIVRLHEVLASRT-----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYF 115
           +I+  + H ++V++ +++  +      ++Y++LE     +   K+      L     +  
Sbjct: 104 AILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDF-KKLFRTPVYLTELHIKTL 161

Query: 116 Q-QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---ALPQQGVELLHTTCG 171
              L+  V + HS G+ HRDLKP N L++   ++KV DFGL+     P+ G   L  +  
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221

Query: 172 TPN------------------YV------APEV-LSNRGYDGSAADVWSCGVIL 200
             +                  +V      APE+ L    Y   A DVWS G I 
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT-EAIDVWSIGCIF 274

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  134 bits (339), Expect = 3e-36
 Identities = 85/336 (25%), Positives = 138/336 (41%), Gaps = 65/336 (19%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKI 65
            +Y+  + IG G    V  A +     +VA+K L++   +     R      RE+ +MK 
Sbjct: 25  KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY----RELVLMKC 80

Query: 66  VRHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ-QL 118
           V H NI+ L  V   +        VYI++E +    L  +++     L+++   Y   Q+
Sbjct: 81  VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL-CQVIQME--LDHERMSYLLYQM 136

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
           +  + H HS G+ HRDLKP N+++ S   LK+ DFGL A       ++     T  Y AP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL-ARTAGTSFMMTPYVVTRYYRAP 195

Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-----------LPT----LYKKIN 223
           EV+   GY     D+WS G I+  ++ G + F  TD           L T      KK+ 
Sbjct: 196 EVILGMGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254

Query: 224 --AAEF--SCPFW-----------------------FSTGATSLIHKILDPNPKTRIRIE 256
                +  + P +                        ++ A  L+ K+L  +   RI ++
Sbjct: 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314

Query: 257 GIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIE 292
              +HP+    Y+P   SE E           D+ E
Sbjct: 315 EALQHPYINVWYDP---SEAEAPPPKIPDKQLDERE 347

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  132 bits (333), Expect = 7e-36
 Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 28/224 (12%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +   +G+G + +V     +  GE+VA+K+ +     +       + E+    ++RH NI
Sbjct: 11  TLLECVGKGRYGEVWRGSWQ--GENVAVKIFSS----RDEKSWFRETELYNTVMLRHENI 64

Query: 72  VRL----HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +           S T++++I  +   G L+D  +    L    C R    +   +AH H 
Sbjct: 65  LGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAHLHI 123

Query: 128 K--------GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HTTCGTPNY 175
           +         + HRDLK +N+L+   G   ++D GL+ +  Q    L    +   GT  Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183

Query: 176 VAPEVLSNRGYDGSA-----ADVWSCGVILFVLMAGYLPFGETD 214
           +APEVL               D+W+ G++L+ +    +  G  +
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  135 bits (341), Expect = 8e-36
 Identities = 84/341 (24%), Positives = 137/341 (40%), Gaps = 77/341 (22%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIV 66
           +Y+  + IG G    V  A +     +VA+K L++   +     R      RE+ +MK V
Sbjct: 63  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY----RELVLMKCV 118

Query: 67  RHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ-QLI 119
            H NI+ L  V   +        VY+++E +    L  +++     L+++   Y   Q++
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL-CQVIQME--LDHERMSYLLYQML 174

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV--- 176
             + H HS G+ HRDLKP N+++ S   LK+ DFGL+        +      TP YV   
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM------TP-YVVTR 227

Query: 177 ---APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-----------LPT----L 218
              APEV+   GY     D+WS G I+  ++   + F   D           L T     
Sbjct: 228 YYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286

Query: 219 YKKIN--AAEF--SCPFW----FST-------------------GATSLIHKILDPNPKT 251
            KK+      +  + P +    F                      A  L+ K+L  +P  
Sbjct: 287 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346

Query: 252 RIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIE 292
           RI ++   +HP+    Y+P   +E E           D+ E
Sbjct: 347 RISVDDALQHPYINVWYDP---AEVEAPPPQIYDKQLDERE 384

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  130 bits (328), Expect = 4e-35
 Identities = 73/315 (23%), Positives = 119/315 (37%), Gaps = 65/315 (20%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLA-KSTILKHRMVDQIKREISIMKIVRH 68
           +Y   + +G G    V  A + +  + VA+K +           +    REI I++ + H
Sbjct: 12  RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHAL----REIKIIRRLDH 67

Query: 69  PNIVRLHEVLASRTK--------------VYIILEFVTGGELFDKIVHQGRLLENDCRRY 114
            NIV++ E+L                   VYI+ E++   +L   ++ QG LLE   R +
Sbjct: 68  DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDL-ANVLEQGPLLEEHARLF 125

Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLS-ALPQQGVELLHTTCGT 172
             QL+  + + HS  V HRDLKP NL +++    LK+ DFGL+  +        H +   
Sbjct: 126 MYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS--- 182

Query: 173 PNYV------APEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPF--------------- 210
              +      +P + LS   Y   A D+W+ G I   ++ G   F               
Sbjct: 183 -EGLVTKWYRSPRLLLSPNNYT-KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240

Query: 211 ----GETDLPTLYKKINAAEFSCPFW----FST-------GATSLIHKILDPNPKTRIRI 255
                E D   L   I     +         +         A   + +IL  +P  R+  
Sbjct: 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTA 300

Query: 256 EGIRKHPWFRKNYNP 270
           E    HP+      P
Sbjct: 301 EEALSHPYMSIYSFP 315

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  130 bits (330), Expect = 6e-35
 Identities = 76/310 (24%), Positives = 128/310 (41%), Gaps = 65/310 (20%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKI 65
           A Y   + +G G +  V  A +  TG  VA+K L +   S +   R      RE+ ++K 
Sbjct: 25  AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY----RELRLLKH 80

Query: 66  VRHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ-QL 118
           +RH N++ L +V             Y+++ F+ G +L   + H+   L  D  ++   Q+
Sbjct: 81  MRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQM 137

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV-- 176
           +  + + H+ G+ HRDLKP NL ++    LK+ DFGL+    +  +   T      YV  
Sbjct: 138 LKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA----RQADSEMT-----GYVVT 188

Query: 177 ----APEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI--------- 222
               APEV L+   Y     D+WS G I+  ++ G   F  +D     K+I         
Sbjct: 189 RWYRAPEVILNWMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 247

Query: 223 ---------NAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRK 260
                     A  +    P              S  A +L+ K+L  + + R+       
Sbjct: 248 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307

Query: 261 HPWFRKNYNP 270
           HP+F   ++ 
Sbjct: 308 HPYFESLHDT 317

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  130 bits (328), Expect = 1e-34
 Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 67/313 (21%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQ-IKREISIMKIVR 67
            +Y     IGEG +  V  A +      VA+K   K +  +H+   Q   REI I+   R
Sbjct: 27  PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIK---KISPFEHQTYCQRTLREIKILLRFR 83

Query: 68  HPNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQ---GRLLENDCRRYFQ-QL 118
           H NI+ +++++ + T      VYI+ +      L +  +++    + L ND   YF  Q+
Sbjct: 84  HENIIGINDIIRAPTIEQMKDVYIVQD------LMETDLYKLLKTQHLSNDHICYFLYQI 137

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL--SALPQQGVELLHTTCGTPNYV 176
           +  + + HS  V HRDLKP NLLL++  +LK+ DFGL   A P        T      YV
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT-----EYV 192

Query: 177 ------APEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPF------------------- 210
                 APE+ L+++GY   + D+WS G IL  +++    F                   
Sbjct: 193 ATRWYRAPEIMLNSKGYT-KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 251

Query: 211 GETDLPTLYKKINAAEF--SCPFW----FST-------GATSLIHKILDPNPKTRIRIEG 257
            + DL  +     A  +  S P      ++         A  L+ K+L  NP  RI +E 
Sbjct: 252 SQEDLNCIINL-KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310

Query: 258 IRKHPWFRKNYNP 270
              HP+  + Y+P
Sbjct: 311 ALAHPYLEQYYDP 323

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  130 bits (328), Expect = 1e-34
 Identities = 77/309 (24%), Positives = 128/309 (41%), Gaps = 65/309 (21%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKIV 66
           +Y+    +G G +  V  A + +TG  VA+K L++   S I   R      RE+ ++K +
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLLKHM 85

Query: 67  RHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ-QLI 119
           +H N++ L +V            VY++   + G +L + +  Q   L +D  ++   Q++
Sbjct: 86  KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFLIYQIL 142

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV--- 176
             + + HS  + HRDLKP NL ++    LK+ DFGL+          HT      YV   
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------HTADEMTGYVATR 193

Query: 177 ---APEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI---------- 222
              APE+ L+   Y+    D+WS G I+  L+ G   F  TD     K I          
Sbjct: 194 WYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 252

Query: 223 --------NAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                   +A  +  S                +  A  L+ K+L  +   RI       H
Sbjct: 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312

Query: 262 PWFRKNYNP 270
            +F + ++P
Sbjct: 313 AYFAQYHDP 321

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  129 bits (327), Expect = 1e-34
 Identities = 78/309 (25%), Positives = 127/309 (41%), Gaps = 64/309 (20%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK---STILKHRMVDQIKREISIMKI 65
             Y     +G G +  V  A ++ +GE VA+K L++   S I   R      RE+ ++K 
Sbjct: 24  KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY----RELLLLKH 79

Query: 66  VRHPNIVRLHEVLASRTK------VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI 119
           ++H N++ L +V    +        Y+++ F+   +L  KI+   +  E   +    Q++
Sbjct: 80  MQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDL-QKIMGL-KFSEEKIQYLVYQML 136

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV--- 176
             + + HS GV HRDLKP NL ++    LK+ DFGL+    +  +   T      YV   
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA----RHADAEMT-----GYVVTR 187

Query: 177 ---APEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI---------- 222
              APEV LS   Y+    D+WS G I+  ++ G   F   D      +I          
Sbjct: 188 WYRAPEVILSWMHYN-QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246

Query: 223 --------NAAEF--SCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                    A  +  S P              S  A  L+ K+L+ +   R+       H
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306

Query: 262 PWFRKNYNP 270
           P+F    +P
Sbjct: 307 PFFEPFRDP 315

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  128 bits (323), Expect = 3e-34
 Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 28/224 (12%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           ++ + IG+G + +V   + R  GE VA+KV   +           + EI    ++RH NI
Sbjct: 40  QMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENI 93

Query: 72  VRL----HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +       +   S T++Y+I ++   G L+D  +    L      +     +  + H H+
Sbjct: 94  LGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSVSGLCHLHT 152

Query: 128 K--------GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HTTCGTPNY 175
           +         + HRDLK +N+L+   G   ++D GL+         +    +T  GT  Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212

Query: 176 VAPEVLSNRGYDGS-----AADVWSCGVILFVLMAGYLPFGETD 214
           + PEVL              AD++S G+IL+ +    +  G  +
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  132 bits (333), Expect = 5e-34
 Identities = 55/215 (25%), Positives = 85/215 (39%), Gaps = 19/215 (8%)

Query: 11  YEVGRTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           YEV   I  G    +  A      G  V +K L  S             E   +  V HP
Sbjct: 82  YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHP 139

Query: 70  NIVRLHEV-----LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           +IV++               YI++E+V G  L        +L   +   Y  +++ A+++
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAYLLEILPALSY 197

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGVELLHTTCGTPNYVAPEVLSN 183
            HS G+ + DLKPEN++L     LK+ D G  S +   G        GTP + APE++  
Sbjct: 198 LHSIGLVYNDLKPENIMLTE-EQLKLIDLGAVSRINSFG-----YLYGTPGFQAPEIV-- 249

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL 218
           R     A D+++ G  L  L           +  L
Sbjct: 250 RTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL 284

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  127 bits (322), Expect = 2e-33
 Identities = 57/235 (24%), Positives = 95/235 (40%), Gaps = 51/235 (21%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMK---------VLAKSTILKHRMVDQIKREI 60
            Y +   IG G++  V  A ++ T ++VA+K         +  K  +          REI
Sbjct: 27  NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL----------REI 76

Query: 61  SIMKIVRHPNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYF 115
           +I+  ++   I+RL++++          +YI+LE     +L  K+      L  +  +  
Sbjct: 77  TILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDL-KKLFKTPIFLTEEHIKTI 134

Query: 116 Q-QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------------ALPQQ 161
              L+      H  G+ HRDLKP N LL+   ++KV DFGL+              L + 
Sbjct: 135 LYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEEN 194

Query: 162 GVELLHTTCGTP---NYV------APEV-LSNRGYDGSAADVWSCGVILFVLMAG 206
                H         ++V      APE+ L    Y   + D+WS G I   L+  
Sbjct: 195 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYT-KSIDIWSTGCIFAELLNM 248

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  126 bits (319), Expect = 2e-33
 Identities = 73/337 (21%), Positives = 126/337 (37%), Gaps = 68/337 (20%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMK-------VLAKSTILKHRMVDQ-IKREIS 61
            Y V R I  G++  V    +   G  VA+K             IL    + + + REI 
Sbjct: 23  PYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81

Query: 62  IMKIVRHPNIVRLHEVLASRTK-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQ 116
           ++    HPNI+ L ++     +     +Y++ E +   +L   I  Q  ++     +YF 
Sbjct: 82  LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFM 140

Query: 117 -QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
             ++  +   H  GV HRDL P N+LL    ++ + DF L+                 +Y
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK-------THY 193

Query: 176 V------APEV-LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-----------LPT 217
           V      APE+ +  +G+     D+WS G ++  +      F  +            + T
Sbjct: 194 VTHRWYRAPELVMQFKGFT-KLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252

Query: 218 ----LYKKI---NAAEF---SCPFW-----------FSTGATSLIHKILDPNPKTRIRIE 256
                       +A ++   S                   A  LI K+L+ NP+ RI  E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312

Query: 257 GIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIED 293
              +HP+F   ++P    +  E   +  H  FD+   
Sbjct: 313 QALRHPYFESLFDP---LDLTEGLSERFH--FDESVT 344

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  125 bits (316), Expect = 3e-33
 Identities = 47/210 (22%), Positives = 93/210 (44%), Gaps = 28/210 (13%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +  +IG+G F +V   + R  GE VA+K+ +             + EI    ++RH NI
Sbjct: 45  VLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENI 98

Query: 72  VRL----HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +      ++   + T+++++ ++   G LFD  +++  +      +        +AH H 
Sbjct: 99  LGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTASGLAHLHM 157

Query: 128 K--------GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL----HTTCGTPNY 175
           +         + HRDLK +N+L+   G   ++D GL+       + +    +   GT  Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217

Query: 176 VAPEVLSNRGYDGS-----AADVWSCGVIL 200
           +APEVL +            AD+++ G++ 
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVF 247

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  125 bits (316), Expect = 8e-33
 Identities = 82/347 (23%), Positives = 128/347 (36%), Gaps = 102/347 (29%)

Query: 9   AKYEVGRTIGEGTFAKVRFAQNRETGESVAMK---------VLAKSTILKHRMVDQIKRE 59
            KYE+ + +G+G +  V  + +R TGE VA+K           A+ T           RE
Sbjct: 9   RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF----------RE 58

Query: 60  ISIMKIVR-HPNIVRLHEVLA--SRTKVYIILEFVTGGELFDKIVHQ---GRLLENDCRR 113
           I I+  +  H NIV L  VL   +   VY++ +        +  +H      +LE   ++
Sbjct: 59  IMILTELSGHENIVNLLNVLRADNDRDVYLVFD------YMETDLHAVIRANILEPVHKQ 112

Query: 114 YFQ-QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT 172
           Y   QLI  + + HS G+ HRD+KP N+LL++  ++KV+DFGLS        + +    +
Sbjct: 113 YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLS 172

Query: 173 PN---------------YV------APEV-LSNRGYDGSAADVWSCGVILFVLMAG---- 206
            N               YV      APE+ L +  Y     D+WS G IL  ++ G    
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYT-KGIDMWSLGCILGEILCGKPIF 231

Query: 207 ----------------------------------YL---------PFGETDLPTLYKKIN 223
                                              +                     K  
Sbjct: 232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291

Query: 224 AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
             + +     +  A  L+ K+L  NP  RI      KHP+    +NP
Sbjct: 292 LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  122 bits (307), Expect = 5e-32
 Identities = 47/224 (20%), Positives = 86/224 (38%), Gaps = 27/224 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
             ++      G F  V  AQ     E VA+K+         +   Q + E+  +  ++H 
Sbjct: 25  PLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHE 78

Query: 70  NIVRL----HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           NI++         +    +++I  F   G L D  +    +  N+     + +   +A+ 
Sbjct: 79  NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSD-FLKANVVSWNELCHIAETMARGLAYL 137

Query: 126 HSKGVY----------HRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTP 173
           H               HRD+K +N+LL +     ++DFGL+   + G     T    GT 
Sbjct: 138 HEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTR 197

Query: 174 NYVAPEVLSNRGYDGS----AADVWSCGVILFVLMAGYLPFGET 213
            Y+APEVL              D+++ G++L+ L +        
Sbjct: 198 RYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score =  119 bits (299), Expect = 3e-31
 Identities = 30/207 (14%), Positives = 63/207 (30%), Gaps = 30/207 (14%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y +    G     +   A +      VA+  +    +L   ++ +       +  +  P 
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPG 92

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           + R+ +V+ +R    ++ E++ GG L +  V           R  Q L  A    H  GV
Sbjct: 93  VARVLDVVHTRAGGLVVAEWIRGGSLQE--VADTSPSPVGAIRAMQSLAAAADAAHRAGV 150

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
                 P  + +   G++ ++                        +              
Sbjct: 151 ALSIDHPSRVRVSIDGDVVLAYPA--------------------TMPDA--------NPQ 182

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPT 217
            D+   G  L+ L+    P  E  + +
Sbjct: 183 DDIRGIGASLYALLVNRWPLPEAGVRS 209

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  116 bits (293), Expect = 1e-29
 Identities = 61/207 (29%), Positives = 89/207 (42%), Gaps = 15/207 (7%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +G  IG G F +V   + R     VA+K   ++     +   +  +E  I+K   HPNI
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLK--AKFLQEARILKQYSHPNI 174

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF-QQLIDAVAHCHSKGV 130
           VRL  V   +  +YI++E V GG+    +  +G  L               + +  SK  
Sbjct: 175 VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG------TPNYVAPEVLSNR 184
            HRDL   N L+     LK+SDFG+S     GV              T    APE L+  
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWT----APEALNYG 290

Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            Y  S +DVWS G++L+     G  P+
Sbjct: 291 RYS-SESDVWSFGILLWETFSLGASPY 316

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  115 bits (290), Expect = 3e-29
 Identities = 62/327 (18%), Positives = 122/327 (37%), Gaps = 79/327 (24%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-- 67
           +Y + R +G G F+ V  A++      VAMK++ +         +  + EI +++ V   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIV-RG---DKVYTEAAEDEIKLLQRVNDA 75

Query: 68  ---------HPNIVRLHE--VLASRTKVYIILEF-VTGGELFD--KIVHQGRLLENDCRR 113
                      +I++L +         V++++ F V G  L    K      +     ++
Sbjct: 76  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 135

Query: 114 YFQQLIDAVAHCHSK-GVYHRDLKPENLLLD------SYGNLKVSDFGLSALPQQGVELL 166
             +QL+  + + H + G+ H D+KPEN+L++      +   +K++D G +       E  
Sbjct: 136 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNAC---WYDEHY 192

Query: 167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK----- 221
             +  T  Y +PEVL    +    AD+WS   ++F L+ G   F   +  +  K      
Sbjct: 193 TNSIQTREYRSPEVLLGAPWG-CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251

Query: 222 -------------INAAEFSCPFWFSTGAT------------------------------ 238
                        +   +++  F+ S G                                
Sbjct: 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEIS 311

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFR 265
             +  +L  +P+ R    G+  HPW +
Sbjct: 312 DFLSPMLQLDPRKRADAGGLVNHPWLK 338

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  113 bits (285), Expect = 7e-29
 Identities = 45/219 (20%), Positives = 76/219 (34%), Gaps = 39/219 (17%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI--VRHP 69
           ++   IG G +  V           VA+K      +           E +I ++  + H 
Sbjct: 16  KLLELIGRGRYGAVYKGSLD--ERPVAVK------VFSFANRQNFINEKNIYRVPLMEHD 67

Query: 70  NIVRL-----HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
           NI R            R +  +++E+   G L    +           R    +   +A+
Sbjct: 68  NIARFIVGDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVTRGLAY 126

Query: 125 CHS---------KGVYHRDLKPENLLLDSYGNLKVSDFGLS--------ALPQQGVELLH 167
            H+           + HRDL   N+L+ + G   +SDFGLS          P +      
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186

Query: 168 TTCGTPNYVAPEVLSNR------GYDGSAADVWSCGVIL 200
           +  GT  Y+APEVL                D+++ G+I 
Sbjct: 187 SEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIY 225

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  113 bits (285), Expect = 3e-28
 Identities = 70/281 (24%), Positives = 115/281 (40%), Gaps = 43/281 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
           +YEV + IG+G+F +V  A + +  + VA+K++      + R   Q   EI I++ +R  
Sbjct: 98  RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN----EKRFHRQAAEEIRILEHLRKQ 153

Query: 69  -----PNIVRLHEVLASRTKVYIILEFVTGGELFD---KIVHQGRLLENDCRRYFQQLID 120
                 N++ + E    R  + +  E +    L++   K   QG  L    R++   ++ 
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSL-PLVRKFAHSILQ 211

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYG--NLKVSDFGLSALPQQGVELLHTTCGTPNYVAP 178
            +   H   + H DLKPEN+LL   G   +KV DFG S    Q V   +T   +  Y AP
Sbjct: 212 CLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV---YTYIQSRFYRAP 268

Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFWFSTGA 237
           EV+    Y     D+WS G IL  L+ GY    GE +   L                   
Sbjct: 269 EVILGARYG-MPIDMWSLGCILAELLTGYPLLPGEDEGDQL------------------- 308

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEE 278
            + + ++L    +  +     R   +      P  C+    
Sbjct: 309 -ACMIELLGMPSQKLLD-ASKRAKNFVSSKGYPRYCTVTTL 347

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  112 bits (282), Expect = 4e-28
 Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)

Query: 13  VGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + + +G G F +V   + +   +   SVA+K L      K R       E SIM    HP
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHP 106

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           NI+RL  V+     V I+ E++  G L   +  H  +          + +   + +    
Sbjct: 107 NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNRG 185
           G  HRDL   N+L++S    KVSDFGL  + +   E  +TT G    +   +PE ++ R 
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226

Query: 186 YDGSAADVWSCGVILF-VLMAGYLPF 210
           +  SA+DVWS G++L+ V+  G  P+
Sbjct: 227 FT-SASDVWSYGIVLWEVMSYGERPY 251

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  111 bits (279), Expect = 4e-28
 Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 11/207 (5%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
            + + IG G   +V + + R  G+    VA+K L      + R       E SIM    H
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQR--RDFLSEASIMGQFDH 109

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHS 127
           PNI+RL  V+       I+ E++  G L   +  H G+          + +   + +   
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNR 184
            G  HRDL   N+L+DS    KVSDFGLS + +   +  +TT G    +   APE ++ R
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229

Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVWS GV+++ VL  G  P+
Sbjct: 230 TFS-SASDVWSFGVVMWEVLAYGERPY 255

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  113 bits (284), Expect = 8e-28
 Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 19/220 (8%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +   +G G + +V     ++   +VA+K L + T+     V++  +E ++MK ++HPN+
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNL 278

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLIDAVAH 124
           V+L  V       YII EF+T G L D       + V    LL         Q+  A+ +
Sbjct: 279 VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-----MATQISSAMEY 333

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-YVAPEVLSN 183
              K   HR+L   N L+     +KV+DFGLS L        H     P  + APE L+ 
Sbjct: 334 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY 393

Query: 184 RGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             +    +DVW+ GV+L+ +   G  P+   DL  +Y+ +
Sbjct: 394 NKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  110 bits (276), Expect = 8e-28
 Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 9/218 (4%)

Query: 13  VGRTIGEGTFAKVRFA--QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
             + +G G F  V+    Q ++  ++VA+K+L K+      + D++  E ++M+ + +P 
Sbjct: 21  EDKELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPY 79

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           IVR+  +        +++E    G L   +     + + +      Q+   + +      
Sbjct: 80  IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF 138

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT--P-NYVAPEVLSNRGYD 187
            HRDL   N+LL +    K+SDFGLS   +              P  + APE ++   + 
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198

Query: 188 GSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINA 224
            S +DVWS GV+++     G  P+       +   +  
Sbjct: 199 -SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  109 bits (275), Expect = 8e-28
 Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 10/205 (4%)

Query: 14  GRTIGEGTFAKVRFAQ-NRETGES--VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
              +G+G+F  VR  + +  +G++  VA+K L    + +   +D   RE++ M  + H N
Sbjct: 23  LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           ++RL+ V      + ++ E    G L D++  HQG  L     RY  Q+ + + +  SK 
Sbjct: 83  LIRLYGV-VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNRGY 186
             HRDL   NLLL +   +K+ DFGL     Q  +               APE L  R +
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 201

Query: 187 DGSAADVWSCGVILF-VLMAGYLPF 210
              A+D W  GV L+ +   G  P+
Sbjct: 202 S-HASDTWMFGVTLWEMFTYGQEPW 225

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  110 bits (278), Expect = 8e-28
 Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 12/207 (5%)

Query: 13  VGRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
             + IG G F +V     + +       VA+K L      K R       E  IM    H
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQR--VDFLGEAGIMGQFSH 105

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHS 127
            NI+RL  V++    + II E++  G L   +    G           + +   + +  +
Sbjct: 106 HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 165

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNR 184
               HRDL   N+L++S    KVSDFGLS + +   E  +TT G    +   APE +S R
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225

Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVWS G++++ V+  G  P+
Sbjct: 226 KFT-SASDVWSFGIVMWEVMTYGERPY 251

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  109 bits (274), Expect = 2e-27
 Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 13/197 (6%)

Query: 14  GRTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            R +GEG F KV       +   TGE VA+K L   +   H     +K+EI I++ + H 
Sbjct: 26  IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHI--ADLKKEIEILRNLYHE 83

Query: 70  NIVRLHEV--LASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCH 126
           NIV+   +        + +I+EF+  G L + +  ++ ++      +Y  Q+   + +  
Sbjct: 84  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSN 183
           S+   HRDL   N+L++S   +K+ DFGL+   +   E         + V   APE L  
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQ 203

Query: 184 RGYDGSAADVWSCGVIL 200
             +   A+DVWS GV L
Sbjct: 204 SKFY-IASDVWSFGVTL 219

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  107 bits (269), Expect = 8e-27
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 20/200 (10%)

Query: 14  GRTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIK---REISIMKIV 66
            + +G+G F  V           TGE VA+K L      +H   + ++   REI I+K +
Sbjct: 15  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL------QHSTEEHLRDFEREIEILKSL 68

Query: 67  RHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVA 123
           +H NIV+   V  S  +  + +I+E++  G L D +  H+ R+      +Y  Q+   + 
Sbjct: 69  QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 128

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEV 180
           +  +K   HRDL   N+L+++   +K+ DFGL+ +  Q  E         + +   APE 
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188

Query: 181 LSNRGYDGSAADVWSCGVIL 200
           L+   +   A+DVWS GV+L
Sbjct: 189 LTESKFS-VASDVWSFGVVL 207

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  106 bits (266), Expect = 2e-26
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 9/215 (4%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +   +G G + +V     ++   +VA+K L + T+     V++  +E ++MK ++HPN+
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNL 71

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFD--KIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           V+L  V       YII EF+T G L D  +  ++  +          Q+  A+ +   K 
Sbjct: 72  VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDG 188
             HRDL   N L+     +KV+DFGLS L        H     P  + APE L+   +  
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS- 190

Query: 189 SAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             +DVW+ GV+L+ +   G  P+   DL  +Y+ +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  106 bits (267), Expect = 2e-26
 Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 20/200 (10%)

Query: 14  GRTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIK---REISIMKIV 66
            + +G+G F  V           TGE VA+K L      +H   + ++   REI I+K +
Sbjct: 46  LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL------QHSTEEHLRDFEREIEILKSL 99

Query: 67  RHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVA 123
           +H NIV+   V  S  +  + +I+E++  G L D +  H+ R+      +Y  Q+   + 
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 159

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEV 180
           +  +K   HRDL   N+L+++   +K+ DFGL+ +  Q  E         + +   APE 
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 219

Query: 181 LSNRGYDGSAADVWSCGVIL 200
           L+   +   A+DVWS GV+L
Sbjct: 220 LTESKFS-VASDVWSFGVVL 238

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  106 bits (267), Expect = 2e-26
 Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 12/217 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            + +G G F  V        GE     VA+K L ++T  K     +I  E  +M  V +P
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNP 77

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           ++ RL  +    + V +I + +  G L D +  H+  +       +  Q+   + +   +
Sbjct: 78  HVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGY 186
            + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196

Query: 187 DGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
               +DVWS GV ++ ++  G  P+       +   +
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  106 bits (266), Expect = 6e-26
 Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 21/213 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+   IG+G+F +V  A +R   E VA+K++ K+   K   ++Q + E+ +++++   
Sbjct: 55  RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKII-KN---KKAFLNQAQIEVRLLELMNKH 110

Query: 70  ------NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDA 121
                  IV L      R  + ++ E +    L+D + +     +  N  R++ QQ+  A
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169

Query: 122 VAHCHSK--GVYHRDLKPENLLLDSYGN--LKVSDFGLSALPQQGVELLHTTCGTPNYVA 177
           +    +    + H DLKPEN+LL +     +K+ DFG S+      + ++    +  Y +
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG-SSCQLG--QRIYQYIQSRFYRS 226

Query: 178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
           PEVL    YD  A D+WS G IL  +  G   F
Sbjct: 227 PEVLLGMPYD-LAIDMWSLGCILVEMHTGEPLF 258

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  104 bits (261), Expect = 7e-26
 Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 11/215 (5%)

Query: 17  IGEGTFAKVRFAQ-NRETGE-SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  VR         +  VA+KVL + T       +++ RE  IM  + +P IVRL
Sbjct: 18  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRL 75

Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
             V      + +++E   GG L   +   +  +  ++      Q+   + +   K   HR
Sbjct: 76  IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 134

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT--P-NYVAPEVLSNRGYDGSA 190
           DL   N+LL +    K+SDFGLS                  P  + APE ++ R +  S 
Sbjct: 135 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SR 193

Query: 191 ADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINA 224
           +DVWS GV ++  L  G  P+ +   P +   I  
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 228

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  105 bits (263), Expect = 7e-26
 Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 20/200 (10%)

Query: 14  GRTIGEGTFAKVRFA----QNRETGESVAMKVLAKSTILKHRMVDQIK---REISIMKIV 66
              +G+G F  V           TG  VA+K L      +H   DQ +   REI I+K +
Sbjct: 28  ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL------QHSGPDQQRDFQREIQILKAL 81

Query: 67  RHPNIVRLHEVLASRTK--VYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVA 123
               IV+   V     +  + +++E++  G L D +  H+ RL  +    Y  Q+   + 
Sbjct: 82  HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGME 141

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEV 180
           +  S+   HRDL   N+L++S  ++K++DFGL+ L     +         + +   APE 
Sbjct: 142 YLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201

Query: 181 LSNRGYDGSAADVWSCGVIL 200
           LS+  +    +DVWS GV+L
Sbjct: 202 LSDNIFS-RQSDVWSFGVVL 220

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  105 bits (263), Expect = 8e-26
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 13/196 (6%)

Query: 14  GRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            R +GEG F KV        N  TGE VA+K L      +HR     K+EI I++ + H 
Sbjct: 36  IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR--SGWKQEIDILRTLYHE 93

Query: 70  NIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
           +I++            + +++E+V  G L D  + +  +       + QQ+ + +A+ H+
Sbjct: 94  HIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-YLPRHSIGLAQLLLFAQQICEGMAYLHA 152

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNR 184
           +   HRDL   N+LLD+   +K+ DFGL+    +G E         + V   APE L   
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 212

Query: 185 GYDGSAADVWSCGVIL 200
            +   A+DVWS GV L
Sbjct: 213 KFY-YASDVWSFGVTL 227

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  103 bits (260), Expect = 1e-25
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 35/225 (15%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           ++ +TIG+G F  V     R  G  VA+K +                E S+M  +RH N+
Sbjct: 24  KLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNL 76

Query: 72  VRLHEV-LASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLIDAVA 123
           V+L  V +  +  +YI+ E++  G L D        ++    LL+     +   + +A+ 
Sbjct: 77  VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK-----FSLDVCEAME 131

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT--PNYV---AP 178
           +       HRDL   N+L+      KVSDFGL+       E   T      P  V   AP
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLP--VKWTAP 183

Query: 179 EVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
           E L  + +  + +DVWS G++L+ +   G +P+    L  +  ++
Sbjct: 184 EALREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 227

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  106 bits (266), Expect = 2e-25
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +   +G+G F +V       T   VA+K L   T+     +    +E  +MK +RH  +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKL 241

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLIDAVAH 124
           V+L+ V  S   +YI+ E+++ G L D       K +   +L++        Q+   +A+
Sbjct: 242 VQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 295

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSN 183
                  HRDL+  N+L+      KV+DFGL+ L +            P  + APE    
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 355

Query: 184 RGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             +    +DVWS G++L  +   G +P+       +  ++
Sbjct: 356 GRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 394

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  106 bits (267), Expect = 2e-25
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
            +   +G+G F +V       T   VA+K L   T+     +    +E  +MK +RH  +
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFL----QEAQVMKKLRHEKL 324

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLIDAVAH 124
           V+L+ V  S   +YI+ E+++ G L D       K +   +L++        Q+   +A+
Sbjct: 325 VQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD-----MAAQIASGMAY 378

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSN 183
                  HRDL+  N+L+      KV+DFGL+ L +            P  + APE    
Sbjct: 379 VERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY 438

Query: 184 RGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             +    +DVWS G++L  +   G +P+       +  ++
Sbjct: 439 GRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV 477

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  103 bits (260), Expect = 2e-25
 Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 12/217 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            + +G G F  V        GE     VA+K L ++T  K     +I  E  +M  V +P
Sbjct: 20  IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN--KEILDEAYVMASVDNP 77

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           ++ RL  +    + V +I + +  G L D +  H+  +       +  Q+   + +   +
Sbjct: 78  HVCRLLGIC-LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG-TP-NYVAPEVLSNRGY 186
            + HRDL   N+L+ +  ++K++DFGL+ L     +  H   G  P  ++A E + +R Y
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196

Query: 187 DGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
               +DVWS GV ++ ++  G  P+       +   +
Sbjct: 197 T-HQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  102 bits (256), Expect = 3e-25
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 16/225 (7%)

Query: 9   AKYEV-------GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
            K+ +        + IG G F  V         + VA+K + +  + +    +    E  
Sbjct: 1   GKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSE----EDFIEEAE 55

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLID 120
           +M  + HP +V+L+ V   +  + ++ EF+  G L D +   +G             + +
Sbjct: 56  VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 115

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPE 179
            +A+     V HRDL   N L+     +KVSDFG++           T    P  + +PE
Sbjct: 116 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175

Query: 180 VLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKIN 223
           V S   Y  S +DVWS GV+++ V   G +P+       + + I+
Sbjct: 176 VFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS 219

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  103 bits (259), Expect = 3e-25
 Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 12/217 (5%)

Query: 14  GRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            + +G G F  V        GES    V +KV+   +  +      +   +  +  + H 
Sbjct: 18  LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSF--QAVTDHMLAIGSLDHA 75

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           +IVRL  +    + + ++ +++  G L D +  H+G L       +  Q+   + +    
Sbjct: 76  HIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
           G+ HR+L   N+LL S   ++V+DFG++  LP    +LL++   TP  ++A E +    Y
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKY 194

Query: 187 DGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
               +DVWS GV ++ ++  G  P+    L  +   +
Sbjct: 195 T-HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL 230

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  104 bits (262), Expect = 5e-25
 Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 31/223 (13%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           ++ +TIG+G F  V     R  G  VA+K +                E S+M  +RH N+
Sbjct: 196 KLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNL 248

Query: 72  VRLHEV-LASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLIDAVA 123
           V+L  V +  +  +YI+ E++  G L D        ++    LL+     +   + +A+ 
Sbjct: 249 VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK-----FSLDVCEAME 303

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGT--P-NYVAPEV 180
           +       HRDL   N+L+      KVSDFGL+       E   T      P  + APE 
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEA 357

Query: 181 LSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
           L  + +  + +DVWS G++L+ +   G +P+    L  +  ++
Sbjct: 358 LREKKFS-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV 399

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  101 bits (253), Expect = 7e-25
 Identities = 51/215 (23%), Positives = 99/215 (46%), Gaps = 11/215 (5%)

Query: 13  VGRTIGEGTFAKVRFAQ-NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           + + +G G F  V+  +   +    VA+K++ + ++ +    D+  +E   M  + HP +
Sbjct: 12  LLKELGSGQFGVVKLGKWKGQY--DVAVKMIKEGSMSE----DEFFQEAQTMMKLSHPKL 65

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           V+ + V +    +YI+ E+++ G L + +  H   L  +        + + +A   S   
Sbjct: 66  VKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF 125

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGS 189
            HRDL   N L+D    +KVSDFG++        +       P  + APEV     Y  S
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYS-S 184

Query: 190 AADVWSCGVILF-VLMAGYLPFGETDLPTLYKKIN 223
            +DVW+ G++++ V   G +P+       +  K++
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS 219

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  103 bits (258), Expect = 8e-25
 Identities = 69/333 (20%), Positives = 120/333 (36%), Gaps = 87/333 (26%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
            + V R +G+GTF +V   Q+ +  +  A+KV+ ++     +     K E  I+K +++ 
Sbjct: 36  AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV-RN---IKKYTRSAKIEADILKKIQND 91

Query: 69  ----PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAV 122
                NIV+ H        + +I E   G  L++ I           D + Y  +++ A+
Sbjct: 92  DINNNNIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKAL 150

Query: 123 AHCHSKGVYHRDLKPENLLLDSYG-------------------------NLKVSDFGLSA 157
            +     + H DLKPEN+LLD                             +K+ DFG  A
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG-CA 209

Query: 158 LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLP 216
             +   +   +   T  Y APEV+ N G+D  ++D+WS G +L  L  G L F     + 
Sbjct: 210 TFKS--DYHGSIINTRQYRAPEVILNLGWD-VSSDMWSFGCVLAELYTGSLLFRTHEHME 266

Query: 217 TL-----------YKKINAAEFSCPFWF-------------STGATS------------- 239
            L              +  A  +    +             ++   S             
Sbjct: 267 HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326

Query: 240 --------LIHKILDPNPKTRIRIEGIRKHPWF 264
                    ++ IL  +P  R     + KH + 
Sbjct: 327 IKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  104 bits (260), Expect = 1e-24
 Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 11/215 (5%)

Query: 17  IGEGTFAKVRFAQNRETGES--VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  VR    R   +   VA+KVL + T       +++ RE  IM  + +P IVRL
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--EEMMREAQIMHQLDNPYIVRL 401

Query: 75  HEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
             V      + +++E   GG L   +   +  +  ++      Q+   + +   K   HR
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 460

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV---APEVLSNRGYDGSA 190
           +L   N+LL +    K+SDFGLS                   +   APE ++ R +  S 
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SR 519

Query: 191 ADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINA 224
           +DVWS GV ++  L  G  P+ +   P +   I  
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQ 554

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  100 bits (252), Expect = 2e-24
 Identities = 69/207 (33%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 12  EVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           E+GR IGEG F  V        +N     +VA+K     T    R  ++  +E   M+  
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPAL--AVAIKTCKNCTSDSVR--EKFLQEALTMRQF 73

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+ 
Sbjct: 74  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R
Sbjct: 133 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 192

Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPF 210
            +  SA+DVW  GV ++ +LM G  PF
Sbjct: 193 RFT-SASDVWMFGVCMWEILMHGVKPF 218

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =   99 bits (250), Expect = 2e-24
 Identities = 58/225 (25%), Positives = 100/225 (44%), Gaps = 39/225 (17%)

Query: 10  KYEVGRT-------IGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
           +Y + R        +GEG F +V    +  ++    +VA+K   K   L ++  ++   E
Sbjct: 6   QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSE 63

Query: 60  ISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQL 118
             IMK + HP+IV+L  ++      +II+E    GEL   +  ++  L       Y  Q+
Sbjct: 64  AVIMKNLDHPHIVKLIGII-EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 122

Query: 119 IDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYV-- 176
             A+A+  S    HRD+   N+L+ S   +K+ DFGLS   +             +Y   
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE-----------DYYKA 171

Query: 177 ----------APEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
                     +PE ++ R +  +A+DVW   V ++ +L  G  PF
Sbjct: 172 SVTRLPIKWMSPESINFRRFT-TASDVWMFAVCMWEILSFGKQPF 215

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 99.2 bits (248), Expect = 4e-24
 Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 11/215 (5%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           ++   +G G F +V         + VA+K L + ++     +     E ++MK ++H  +
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFL----AEANLMKQLQHQRL 70

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYF-QQLIDAVAHCHSKG 129
           VRL+ V  ++  +YII E++  G L D +    G  L  +       Q+ + +A    + 
Sbjct: 71  VRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDG 188
             HRDL+  N+L+    + K++DFGL+ L +            P  + APE ++   +  
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFT- 188

Query: 189 SAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             +DVWS G++L  ++  G +P+     P + + +
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  102 bits (256), Expect = 6e-24
 Identities = 68/205 (33%), Positives = 101/205 (49%), Gaps = 14/205 (6%)

Query: 14  GRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           GR IGEG F  V        +N     +VA+K     T    R  ++  +E   M+   H
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAM--AVAIKTCKNCTSDSVR--EKFLQEALTMRQFDH 450

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHS 127
           P+IV+L  V+ +   V+II+E  T GEL   + V +  L       Y  QL  A+A+  S
Sbjct: 451 PHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES 509

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGY 186
           K   HRD+   N+L+ S   +K+ DFGLS   +       +    P  ++APE ++ R +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569

Query: 187 DGSAADVWSCGVILF-VLMAGYLPF 210
             SA+DVW  GV ++ +LM G  PF
Sbjct: 570 T-SASDVWMFGVCMWEILMHGVKPF 593

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 98.8 bits (247), Expect = 6e-24
 Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 9/215 (4%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
              + +G G F  V++ + R   + VA+K++ + ++ +    D+   E  +M  + H  +
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKL 81

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           V+L+ V   +  ++II E++  G L + +   + R          + + +A+ +  SK  
Sbjct: 82  VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF 141

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSNRGYDGS 189
            HRDL   N L++  G +KVSDFGLS                P  +  PEVL    +  S
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS-S 200

Query: 190 AADVWSCGVILF-VLMAGYLPFGETDLPTLYKKIN 223
            +D+W+ GV+++ +   G +P+         + I 
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 98.6 bits (246), Expect = 3e-23
 Identities = 68/331 (20%), Positives = 112/331 (33%), Gaps = 81/331 (24%)

Query: 10  KYEVGRTIGEGTFAKV-RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           +YE+   +GEGTF KV     +      VA+K++ ++     +  +  + EI+++K ++ 
Sbjct: 20  RYEIVGNLGEGTFGKVVECLDHARGKSQVALKII-RN---VGKYREAARLEINVLKKIKE 75

Query: 69  P------NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLID 120
                    V + +       + I  E + G   F+ +             R    QL  
Sbjct: 76  KDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH 134

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGN-------------------LKVSDFGLSALPQQ 161
           A+   H   + H DLKPEN+L  +                      ++V+DFG SA    
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG-SATFDH 193

Query: 162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTL-- 218
             E   T   T +Y  PEV+   G+     DVWS G ILF    G+  F    +   L  
Sbjct: 194 --EHHTTIVATRHYRPPEVILELGWA-QPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250

Query: 219 ---------YKKINAAEFSCPFW--------------------------------FSTGA 237
                       I+       F+                                     
Sbjct: 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQL 310

Query: 238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY 268
             L+ ++L+ +P  RI +     HP+F    
Sbjct: 311 FDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 97.0 bits (242), Expect = 4e-23
 Identities = 47/223 (21%), Positives = 81/223 (36%), Gaps = 38/223 (17%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGES-------VAMKVLAKSTILKHRMVDQIKREISIMK 64
               ++G+GTF K+     RE G+        V +KVL K+        +      S+M 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR---NYSESFFEAASMMS 67

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVA 123
            + H ++V  + V     +  ++ EFV  G L   +  ++  +         +QL  A+ 
Sbjct: 68  KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMH 127

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNL--------KVSDFGLSALPQQGVELLHTTCGTPNY 175
                 + H ++  +N+LL    +         K+SD G+S                 + 
Sbjct: 128 FLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-----------DI 176

Query: 176 -------VAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
                  V PE + N      A D WS G  L+ +   G  P 
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL 219

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 99.0 bits (247), Expect = 5e-23
 Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 21/220 (9%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI 71
           ++ + +G G F +V  A   +  + VA+K +   ++     +     E ++MK ++H  +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFL----AEANVMKTLQHDKL 245

Query: 72  VRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLIDAVAH 124
           V+LH V  ++  +YII EF+  G L D             +L++     +  Q+ + +A 
Sbjct: 246 VKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID-----FSAQIAEGMAF 299

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP-NYVAPEVLSN 183
              +   HRDL+  N+L+ +    K++DFGL+ + +            P  + APE ++ 
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 359

Query: 184 RGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             +    +DVWS G++L  ++  G +P+     P + + +
Sbjct: 360 GSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 398

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 37/229 (16%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETG-ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           +YE+  T+GEG F KV    + + G   VA+K++ K+     R  +  + EI +++ +  
Sbjct: 15  RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV-KN---VDRYCEAARSEIQVLEHLNT 70

Query: 69  P------NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLID 120
                    V++ E       + I+ E + G   +D I   G      +  R+   Q+  
Sbjct: 71  TDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGN-------------------LKVSDFGLSALPQQ 161
           +V   HS  + H DLKPEN+L                         +KV DFG SA    
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG-SATYDD 188

Query: 162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF 210
             E   T   T +Y APEV+   G+     DVWS G IL     G+  F
Sbjct: 189 --EHHSTLVSTRHYRAPEVILALGWS-QPCDVWSIGCILIEYYLGFTVF 234

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 97.5 bits (243), Expect = 8e-23
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 17/230 (7%)

Query: 6   RRVAKYEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
                      IG G F  V       N       A+K L + T +      Q   E  I
Sbjct: 86  PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGII 143

Query: 63  MKIVRHPNIVRLHEV-LASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLID 120
           MK   HPN++ L  + L S     ++L ++  G+L + I          D   +  Q+  
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT--PNYV- 176
            +    SK   HRDL   N +LD    +KV+DFGL+  +  +  + +H   G   P  V 
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP--VK 261

Query: 177 --APEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKIN 223
             A E L  + +  + +DVWS GV+L+ ++  G  P+ + +   +   + 
Sbjct: 262 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 310

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 96.2 bits (240), Expect = 9e-23
 Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 17/229 (7%)

Query: 6   RRVAKYEVGRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
                      IG G F  V       N       A+K L + T +      Q   E  I
Sbjct: 22  PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVS--QFLTEGII 79

Query: 63  MKIVRHPNIVRLHEV-LASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLID 120
           MK   HPN++ L  + L S     ++L ++  G+L + I          D   +  Q+  
Sbjct: 80  MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139

Query: 121 AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT--PNYV- 176
            + +  SK   HRDL   N +LD    +KV+DFGL+  +  +    +H   G   P  V 
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP--VK 197

Query: 177 --APEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             A E L  + +  + +DVWS GV+L+ ++  G  P+ + +   +   +
Sbjct: 198 WMALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 245

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 94.3 bits (235), Expect = 4e-22
 Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
              R IG+G F  V   +  +  ++    A+K L++ T ++    +   RE  +M+ + H
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQV--EAFLREGLLMRGLNH 81

Query: 69  PNIVRLHEV-LASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCH 126
           PN++ L  + L      +++L ++  G+L   I   Q      D   +  Q+   + +  
Sbjct: 82  PNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA 141

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLS---------ALPQQGVELLHTTCGTPNYV- 176
            +   HRDL   N +LD    +KV+DFGL+         ++ Q     L      P  V 
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL------P--VK 193

Query: 177 --APEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             A E L    +  + +DVWS GV+L+ +L  G  P+   D   L   +
Sbjct: 194 WTALESLQTYRFT-TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 94.3 bits (235), Expect = 5e-22
 Identities = 59/241 (24%), Positives = 105/241 (43%), Gaps = 44/241 (18%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
            +GR +G+G F  VR AQ ++   S   VA+K+L K+ I+    +++  RE + MK   H
Sbjct: 26  TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMKEFDH 84

Query: 69  PNIVRL------HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI--- 119
           P++ +L                 +IL F+  G+L   ++   R+ EN      Q L+   
Sbjct: 85  PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLPLQTLVRFM 143

Query: 120 ----DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
                 + +  S+   HRDL   N +L     + V+DFGLS         +++     +Y
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS-------RKIYSG----DY 192

Query: 176 -------------VAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKK 221
                        +A E L++  Y    +DVW+ GV ++ ++  G  P+   +   +Y  
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYT-VHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY 251

Query: 222 I 222
           +
Sbjct: 252 L 252

>2ehb_D CBL-interacting serine/threonine-protein kinase 2; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} Length = 143

 Score = 88.5 bits (219), Expect = 2e-21
 Identities = 51/70 (72%), Positives = 59/70 (84%)

Query: 305 GGPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLK 364
            GPL+MNAFEMITLSQGLNL+ALFDRRQD+VKRQTRFVSR+    I++NIEAVA S+  K
Sbjct: 2   EGPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFK 61

Query: 365 VHTRNYKVCL 374
            HTRN+K  L
Sbjct: 62  SHTRNFKTRL 71

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 91.5 bits (228), Expect = 4e-21
 Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 33/218 (15%)

Query: 12  EVGRTIGEGTFAKVRFA-----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-I 65
             G+T+G G F KV  A        +   +VA+K+L  S  L  R  + +  E+ ++  +
Sbjct: 26  SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER--EALMSELKVLSYL 83

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGEL-----------FDKIVHQGRLLENDCRRY 114
             H NIV L           +I E+   G+L                    + +++    
Sbjct: 84  GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143

Query: 115 FQQLID-------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH 167
            + L+         +A   SK   HRDL   N+LL      K+ DFGL+   +     + 
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203

Query: 168 TTCGT-PNYV---APEVLSNRGYDGSAADVWSCGVILF 201
                 P  V   APE + N  Y    +DVWS G+ L+
Sbjct: 204 KGNARLP--VKWMAPESIFNCVYT-FESDVWSYGIFLW 238

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 88.5 bits (220), Expect = 5e-20
 Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 43/240 (17%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
            +G+ +GEG F  V     ++   +   VA+K + K      R +++   E + MK   H
Sbjct: 37  ILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKDFSH 95

Query: 69  PNIVRL-----HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI---- 119
           PN++RL             K  +IL F+  G+L   +++  RL         Q L+    
Sbjct: 96  PNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS-RLETGPKHIPLQTLLKFMV 154

Query: 120 ---DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY- 175
                + +  ++   HRDL   N +L     + V+DFGLS       + +++     +Y 
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS-------KKIYSG----DYY 203

Query: 176 ------------VAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
                       +A E L++R Y  S +DVW+ GV ++ +   G  P+       +Y  +
Sbjct: 204 RQGRIAKMPVKWIAIESLADRVYT-SKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL 262

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 88.5 bits (220), Expect = 6e-20
 Identities = 52/220 (23%), Positives = 84/220 (38%), Gaps = 45/220 (20%)

Query: 14  GRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVR 67
           G+T+G G F KV  A        +    VA+K+L  +        + +  E+ IM  + +
Sbjct: 51  GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQ 108

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYFQQLID 120
           H NIV L         V +I E+   G+L +        +         +     + L+ 
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168

Query: 121 -------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
                   +A   SK   HRD+   N+LL +    K+ DFGL+                 
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA----------RDIMNDS 218

Query: 174 NYV------------APEVLSNRGYDGSAADVWSCGVILF 201
           NY+            APE + +  Y    +DVWS G++L+
Sbjct: 219 NYIVKGNARLPVKWMAPESIFDCVYT-VQSDVWSYGILLW 257

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 88.1 bits (219), Expect = 7e-20
 Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 47/219 (21%)

Query: 14  GRTIGEGTFAKVRFAQNRETGES--VAMKVLAKSTILKHRMVDQIKREISIMK-IVRHPN 70
              IGEG F +V  A+ ++ G     A+K + +              E+ ++  +  HPN
Sbjct: 30  QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLGHHPN 87

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRYF--QQLIDA 121
           I+ L      R  +Y+ +E+   G L D               + N        QQL+  
Sbjct: 88  IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147

Query: 122 ---VA----HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPN 174
              VA    +   K   HRDL   N+L+      K++DFGLS              G   
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR-------------GQEV 194

Query: 175 YV------------APEVLSNRGYDGSAADVWSCGVILF 201
           YV            A E L+   Y  + +DVWS GV+L+
Sbjct: 195 YVKKTMGRLPVRWMAIESLNYSVYT-TNSDVWSYGVLLW 232

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 87.3 bits (217), Expect = 1e-19
 Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 53/233 (22%)

Query: 12  EVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
            + R +G+G+F  V           E    VA+K + ++  ++ R+  +   E S+MK  
Sbjct: 28  TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFLNEASVMKEF 85

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRY---FQQLI---- 119
              ++VRL  V++      +I+E +T G+L   +      + N+         ++I    
Sbjct: 86  NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145

Query: 120 ---DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS---------------ALPQQ 161
              D +A+ ++    HRDL   N ++     +K+ DFG++                LP  
Sbjct: 146 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP-- 203

Query: 162 GVELLHTTCGTPNYV---APEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPF 210
                         V   +PE L +  +  + +DVWS GV+L+ +      P+
Sbjct: 204 --------------VRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPY 241

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 44/216 (20%), Positives = 74/216 (34%), Gaps = 34/216 (15%)

Query: 12  EVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
                +GE  F KV           E  ++VA+K L        R   + + E  +   +
Sbjct: 12  RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE--EFRHEAMLRARL 69

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFD---------KIVHQGRLLENDCRRYFQQ 117
           +HPN+V L  V+     + +I  + + G+L +          +                 
Sbjct: 70  QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129

Query: 118 LIDAV-------AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC 170
            +  V        +  S  V H+DL   N+L+    N+K+SD GL               
Sbjct: 130 FVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGN 189

Query: 171 G------TPNYVAPEVLSNRGYDGSAADVWSCGVIL 200
                       APE +    +    +D+WS GV+L
Sbjct: 190 SLLPIRWM----APEAIMYGKFS-IDSDIWSYGVVL 220

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 84.3 bits (209), Expect = 2e-18
 Identities = 48/214 (22%), Positives = 73/214 (34%), Gaps = 36/214 (16%)

Query: 12  EVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
            + R +G G F +V         N  +   VA+K L +    +  +      E  I+   
Sbjct: 33  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKF 90

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI------- 119
            H NIVR   V       +I++E + GG+L   +                 L+       
Sbjct: 91  NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSAL-------PQQGVELLHTT 169
               +       HRD+   N LL   G     K+ DFG++          + G  +L   
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML--- 207

Query: 170 CGTPNYV---APEVLSNRGYDGSAADVWSCGVIL 200
              P  V    PE      +  S  D WS GV+L
Sbjct: 208 ---P--VKWMPPEAFMEGIFT-SKTDTWSFGVLL 235

>2zfd_B Putative uncharacterized protein T20L15_90; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} Length = 123

 Score = 78.1 bits (192), Expect = 6e-18
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)

Query: 306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKV 365
           G   MNAF++I+ S G NL+ LF   +    R  RFVS   A+ ++  +E +  + +L V
Sbjct: 2   GARRMNAFDIISGSPGFNLSGLFGDARK-YDRVERFVSAWTAERVVERLEEIVSAENLTV 60

Query: 366 HTR-NYKVCL 374
             +  + + +
Sbjct: 61  AKKETWGMKI 70

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 83.2 bits (206), Expect = 7e-18
 Identities = 49/214 (22%), Positives = 73/214 (34%), Gaps = 36/214 (16%)

Query: 12  EVGRTIGEGTFAKV-----RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
            + R +G G F +V         N  +   VA+K L +    +  +      E  I+   
Sbjct: 74  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKF 131

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLI------- 119
            H NIVR   V       +I+LE + GG+L   +                 L+       
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191

Query: 120 DAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSAL-------PQQGVELLHTT 169
               +       HRD+   N LL   G     K+ DFG++          + G  +L   
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML--- 248

Query: 170 CGTPNYV---APEVLSNRGYDGSAADVWSCGVIL 200
              P  V    PE      +  S  D WS GV+L
Sbjct: 249 ---P--VKWMPPEAFMEGIFT-SKTDTWSFGVLL 276

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 82.4 bits (204), Expect = 1e-17
 Identities = 55/223 (24%), Positives = 85/223 (38%), Gaps = 38/223 (17%)

Query: 12  EVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-I 65
           E G+ +G G F KV  A             VA+K+L +      R    +  E+ +M  +
Sbjct: 48  EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE--ALMSELKMMTQL 105

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGEL----------------FDKIVHQGRLLEN 109
             H NIV L         +Y+I E+   G+L                  +   +    E+
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165

Query: 110 DCRRYFQQLIDA---VA----HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQ 161
                F+ L+     VA        K   HRDL   N+L+     +K+ DFGL+  +   
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225

Query: 162 GVELLHTTCGTPNYV---APEVLSNRGYDGSAADVWSCGVILF 201
              ++      P  V   APE L    Y    +DVWS G++L+
Sbjct: 226 SNYVVRGNARLP--VKWMAPESLFEGIYT-IKSDVWSYGILLW 265

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 50/228 (21%), Positives = 86/228 (37%), Gaps = 63/228 (27%)

Query: 14  GRTIGEGTFAKVR--FAQNRETGES---VAMKVLAKSTILKHRMVDQIK--REISIMKIV 66
            R +GEG F KV      N    +    VA+K L   T     +  +    RE  ++  +
Sbjct: 20  KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-----LAARKDFQREAELLTNL 74

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFD---------KIVHQGRLLENDCRRYFQQ 117
           +H +IV+ + V      + ++ E++  G+L            I+  G+  +        Q
Sbjct: 75  QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134

Query: 118 LI-------DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-------------- 156
           ++         + +  S+   HRDL   N L+ +   +K+ DFG+S              
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194

Query: 157 -ALPQQGVELLHTTCGTPNYV---APEVLSNRGYDGSAADVWSCGVIL 200
             LP                +    PE +  R +  + +DVWS GVIL
Sbjct: 195 TMLP----------------IRWMPPESIMYRKFT-TESDVWSFGVIL 225

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 81.3 bits (201), Expect = 2e-17
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 53/230 (23%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
            + VG+ IG G F ++R  +N  T E VA+K+    +  +     Q+  E    K +   
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAP---QLHLEYRFYKQLGSG 64

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE---NDCRRYF---------Q 116
             I +++          ++LE              G  LE   + C R F          
Sbjct: 65  DGIPQVYYFGPCGKYNAMVLEL------------LGPSLEDLFDLCDRTFSLKTVLMIAI 112

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS-----DFGLS-----------ALPQ 160
           QLI  + + HSK + +RD+KPEN L+   GN         DF L+              +
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYR 172

Query: 161 QGVELLHTTCGTPNYVAPEVLSNRGYDGS-AADVWSCGVILFVLMAGYLP 209
           +   L     GT  Y++  + ++ G + S   D+ + G +    + G LP
Sbjct: 173 EHKSL----TGTARYMS--INTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 80.5 bits (199), Expect = 2e-17
 Identities = 51/236 (21%), Positives = 91/236 (38%), Gaps = 46/236 (19%)

Query: 1   MKKQTRRVA-KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKRE 59
           M  Q   V   Y+VGR IGEG+F  +    N    + VA+K   + +        Q++ E
Sbjct: 1   MSGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAP---QLRDE 55

Query: 60  ISIMKIVRH-PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE---NDCRRYF 115
               K++     I  ++          ++++              G  LE   + C R F
Sbjct: 56  YRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL------------LGPSLEDLLDLCGRKF 103

Query: 116 ---------QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLK-----VSDFGLSAL--- 158
                    +Q++  V   H K + +RD+KP+N L+    +       V DFG+      
Sbjct: 104 SVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163

Query: 159 PQQGVELLHTT----CGTPNYVAPEVLSNRGYDGS-AADVWSCGVILFVLMAGYLP 209
           P     + +       GT  Y++  + ++ G + S   D+ + G +    + G LP
Sbjct: 164 PVTKQHIPYREKKNLSGTARYMS--INTHLGREQSRRDDLEALGHVFMYFLRGSLP 217

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 80.7 bits (200), Expect = 3e-17
 Identities = 52/229 (22%), Positives = 89/229 (38%), Gaps = 54/229 (23%)

Query: 14  GRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH 68
           G+T+GEG F KV  A       R    +VA+K+L ++       +  +  E +++K V H
Sbjct: 28  GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNH 85

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGEL-----------------FDKIVHQGRLLENDC 111
           P++++L+   +    + +I+E+   G L                             ++ 
Sbjct: 86  PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145

Query: 112 RRYFQQLI-------DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE 164
                 LI         + +     + HRDL   N+L+     +K+SDFGLS        
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLS-------- 197

Query: 165 LLHTTCGTPNYV------------APEVLSNRGYDGSAADVWSCGVILF 201
                    +YV            A E L +  Y  + +DVWS GV+L+
Sbjct: 198 --RDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT-TQSDVWSFGVLLW 243

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 80.4 bits (199), Expect = 4e-17
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 32/215 (14%)

Query: 14  GRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVR 67
           G+ +G G F +V  A         T  +VA+K+L +     H     +  E+ I+  I  
Sbjct: 32  GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGH 89

Query: 68  HPNIVRLHEV-LASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRY--FQQ 117
           H N+V L          + +I+EF   G L         + V      E+  + +   + 
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149

Query: 118 LID-------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC 170
           LI         +    S+   HRDL   N+LL     +K+ DFGL+    +  + +    
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209

Query: 171 GT-PNYV---APEVLSNRGYDGSAADVWSCGVILF 201
              P  +   APE + +R Y    +DVWS GV+L+
Sbjct: 210 ARLP--LKWMAPETIFDRVYT-IQSDVWSFGVLLW 241

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 80.9 bits (200), Expect = 4e-17
 Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 49/224 (21%)

Query: 14  GRTIGEGTFAKVRFA-------QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-I 65
           G+ +GEG F +V  A               VA+K+L        + +  +  E+ +MK I
Sbjct: 74  GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMI 131

Query: 66  VRHPNIVRLHEVLASRTKVYIILEFVTGGELFD---------KIVHQGRLLENDCRRYFQ 116
            +H NI+ L         +Y+I+E+ + G L +                    + +   +
Sbjct: 132 GKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSK 191

Query: 117 QLID-------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT 169
            L+         + +  SK   HRDL   N+L+     +K++DFGL+         +H  
Sbjct: 192 DLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA-------RDIHH- 243

Query: 170 CGTPNYV------------APEVLSNRGYDGSAADVWSCGVILF 201
                Y             APE L +R Y    +DVWS GV+L+
Sbjct: 244 --IDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLW 284

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 81.6 bits (201), Expect = 5e-17
 Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 43/224 (19%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-H 68
           K+ +GR IG G+F ++    N +T E VA+K+    T  KH    Q+  E  I +I++  
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHP---QLLYESKIYRILQGG 62

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE---NDCRRYF---------Q 116
             I  +           ++++              G  LE   N C R            
Sbjct: 63  TGIPNVRWFGVEGDYNVLVMDL------------LGPSLEDLFNFCSRKLSLKTVLMLAD 110

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSAL---PQQGVELLHTT- 169
           Q+I+ V   HSK   HRD+KP+N L+        + + DFGL+           + +   
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYREN 170

Query: 170 ---CGTPNYVAPEVLSNRGYDGS-AADVWSCGVILFVLMAGYLP 209
               GT  Y +  V ++ G + S   D+ S G +L   + G LP
Sbjct: 171 KNLTGTARYAS--VNTHLGIEQSRRDDLESLGYVLMYFLRGSLP 212

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 80.0 bits (198), Expect = 5e-17
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 30/213 (14%)

Query: 12  EVGRTIGEGTFAKVR--FAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIV 66
            +   +GEG F KV      N    +    VA+K L +++          +RE  ++ ++
Sbjct: 44  VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTML 100

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGEL--------FDKIVHQGRLLENDCRRYFQQL 118
           +H +IVR   V      + ++ E++  G+L         D  +  G            QL
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160

Query: 119 I-------DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTC 170
           +         + +       HRDL   N L+     +K+ DFG+S  +       +    
Sbjct: 161 LAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220

Query: 171 GTPNYV---APEVLSNRGYDGSAADVWSCGVIL 200
             P  +    PE +  R +  + +DVWS GV+L
Sbjct: 221 MLP--IRWMPPESILYRKFT-TESDVWSFGVVL 250

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 79.6 bits (197), Expect = 8e-17
 Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 44/263 (16%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL-- 74
           IG G F KV +      G  VA+K     +        + + EI  +   RHP++V L  
Sbjct: 47  IGHGVFGKV-YKGVLRDGAKVALKRRTPESSQGIE---EFETEIETLSFCRHPHLVSLIG 102

Query: 75  ------HEVLASRTKVYIILEFVTGGE----LFDKIVHQGRLLENDCRRYFQQLIDA--- 121
                   +L     +Y   +++  G     L+   +    +      +  +  I A   
Sbjct: 103 FCDERNEMIL-----IY---KYMENGNLKRHLYGSDLPTMSM---SWEQRLEICIGAARG 151

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAP 178
           + + H++ + HRD+K  N+LLD     K++DFG+S    +  +  H +    GT  Y+ P
Sbjct: 152 LHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL-DQTHLSTVVKGTLGYIDP 210

Query: 179 E-VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGA 237
           E  +  R  + S  DV+S GV+LF ++          LP   + +N AE++     + G 
Sbjct: 211 EYFIKGRLTEKS--DVYSFGVVLFEVLCARSAI-VQSLPR--EMVNLAEWAVE-SHNNGQ 264

Query: 238 TSLIHKILDPNPKTRIRIEGIRK 260
              + +I+DPN   +IR E +RK
Sbjct: 265 ---LEQIVDPNLADKIRPESLRK 284

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 79.3 bits (196), Expect = 1e-16
 Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 49/226 (21%)

Query: 12  EVGRTIGEGTFAKVRFA-------QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
            +G+ +GEG F +V  A          +   +VA+K+L      K    D +  E+ +MK
Sbjct: 38  TLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLS-DLV-SEMEMMK 95

Query: 65  -IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRY-- 114
            I +H NI+ L         +Y+I+E+ + G L +         +     +         
Sbjct: 96  MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155

Query: 115 FQQLI-------DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH 167
           F+ L+         + +  S+   HRDL   N+L+     +K++DFGL+           
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA----------R 205

Query: 168 TTCGTPNYV------------APEVLSNRGYDGSAADVWSCGVILF 201
                  Y             APE L +R Y    +DVWS GV+++
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYT-HQSDVWSFGVLMW 250

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 78.6 bits (194), Expect = 1e-16
 Identities = 58/224 (25%), Positives = 90/224 (40%), Gaps = 43/224 (19%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
           +Y +GR IG G+F  +    +   GE VA+K+    T  KH    Q+  E  I K+++  
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHP---QLHIESKIYKMMQGG 64

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLE---NDCRRYF---------Q 116
             I  +    A      +++E              G  LE   N C R F          
Sbjct: 65  VGIPTIRWCGAEGDYNVMVMEL------------LGPSLEDLFNFCSRKFSLKTVLLLAD 112

Query: 117 QLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQGVELLHTT---- 169
           Q+I  + + HSK   HRD+KP+N L+        + + DFGL+   +      H      
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172

Query: 170 ---CGTPNYVAPEVLSNRGYDGS-AADVWSCGVILFVLMAGYLP 209
               GT  Y +  + ++ G + S   D+ S G +L     G LP
Sbjct: 173 KNLTGTARYAS--INTHLGIEQSRRDDLESLGYVLMYFNLGSLP 214

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 78.8 bits (194), Expect = 3e-16
 Identities = 71/377 (18%), Positives = 117/377 (31%), Gaps = 139/377 (36%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-- 67
           +Y V R +G G F+ V  + + +  + VAMKV+ KS        +    EI ++K VR  
Sbjct: 38  RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVV-KSA---EHYTETALDEIRLLKSVRNS 93

Query: 68  ---HPN---IVRL------------HEVLASRTKVYIILEFVTGGELFD--KIVHQGRLL 107
               PN   +V+L            H  +     V+ +L    G  L       +   L 
Sbjct: 94  DPNDPNREMVVQLLDDFKISGVNGTHICM-----VFEVL----GHHLLKWIIKSNYQGLP 144

Query: 108 ENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLL------------------------ 142
               ++  QQ++  + + H+K  + H D+KPEN+LL                        
Sbjct: 145 LPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPP 204

Query: 143 -------------------------DSYGNLKVSDFGLSALPQQGVELLHTTCGTPN-YV 176
                                         +K++D G +    +      T       Y 
Sbjct: 205 PSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYR 260

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK--------------- 221
           + EVL   GY+ + AD+WS   + F L  G   F         +                
Sbjct: 261 SLEVLIGSGYN-TPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP 319

Query: 222 ---INAAEFSCPFWFSTG------------------------------ATSLIHKILDPN 248
              I A ++S  F+   G                               T  +  +L+  
Sbjct: 320 RKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELI 379

Query: 249 PKTRIRIEGIRKHPWFR 265
           P+ R       +HPW  
Sbjct: 380 PEKRATAAECLRHPWLN 396

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 52/236 (22%), Positives = 84/236 (35%), Gaps = 66/236 (27%)

Query: 12  EVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           E  R IGEG F +V  A+       E    VA+K+L +      +     +RE ++M   
Sbjct: 50  EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA--DFQREAALMAEF 107

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGEL-----------------FDKIVHQGRLLEN 109
            +PNIV+L  V A    + ++ E++  G+L                  D           
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167

Query: 110 DCRRYFQQLIDAV-------AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS------ 156
                  + +          A+   +   HRDL   N L+     +K++DFGLS      
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227

Query: 157 ---------ALPQQGVELLHTTCGTPNYV---APEVLSNRGYDGSAADVWSCGVIL 200
                    A+P                +    PE +    Y  + +DVW+ GV+L
Sbjct: 228 DYYKADGNDAIP----------------IRWMPPESIFYNRYT-TESDVWAYGVVL 266

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 77.8 bits (192), Expect = 4e-16
 Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 33/218 (15%)

Query: 12  EVGRTIGEGTFAKVRFA-------QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
            +G+ +GEG F +V  A          +   +VA+K+L        + +  +  E+ +MK
Sbjct: 84  TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMK 141

Query: 65  -IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFD-------KIVHQGRLLENDCRRY-- 114
            I +H NI+ L         +Y+I+E+ + G L +         +     +         
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201

Query: 115 FQQLID-------AVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH 167
           F+ L+         + +  S+   HRDL   N+L+     +K++DFGL+           
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261

Query: 168 TTCGT-PNYV---APEVLSNRGYDGSAADVWSCGVILF 201
           TT G  P  V   APE L +R Y    +DVWS GV+++
Sbjct: 262 TTNGRLP--VKWMAPEALFDRVYT-HQSDVWSFGVLMW 296

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 73.8 bits (180), Expect = 8e-15
 Identities = 38/192 (19%), Positives = 63/192 (32%), Gaps = 48/192 (25%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLA-----KSTILKHRMVDQIKREISIMK 64
           K +    IGEG F +V F Q       VA+K++A            +  ++I  EI I K
Sbjct: 21  KLQRCEKIGEGVFGEV-F-QTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78

Query: 65  IV---------RHPNIVRLHEV------------------------------LASRTKVY 85
            +         R    + L+ V                                   +++
Sbjct: 79  ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF 138

Query: 86  IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDS 144
           I+LEF  GG   +++  +        +    QL  ++A   +     HRDL   N+LL  
Sbjct: 139 IVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKK 197

Query: 145 YGNLKVSDFGLS 156
               K+      
Sbjct: 198 TSLKKLHYTLNG 209

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 26/205 (12%)

Query: 17  IGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHE 76
           +G G F KV +      G  VA+K L            Q + E+ ++ +  H N++RL  
Sbjct: 38  LGRGGFGKV-YKGRLADGTLVAVKRL--KEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94

Query: 77  VLASRTKVYIILEFVTGG----ELFDKIVHQGRLLENDCRRYFQQLIDAVA--------H 124
              + T+  ++  ++  G     L ++   Q  L   D  +  +  + + A        H
Sbjct: 95  FCMTPTERLLVYPYMANGSVASCLRERPESQPPL---DWPKRQRIALGS-ARGLAYLHDH 150

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVL 181
           C  K + HRD+K  N+LLD      V DFGL+ L        H T    GT  ++APE L
Sbjct: 151 CDPK-IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYL 207

Query: 182 SNRGYDGSAADVWSCGVILFVLMAG 206
           S  G      DV+  GV+L  L+ G
Sbjct: 208 S-TGKSSEKTDVFGYGVMLLELITG 231

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 72.6 bits (179), Expect = 1e-14
 Identities = 57/227 (25%), Positives = 86/227 (37%), Gaps = 50/227 (22%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK----HRMVDQIKREIS 61
                   G  +GEG F  V   +      +VA+K LA    +      +   Q  +EI 
Sbjct: 28  DERPISVGGNKMGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQ---QFDQEIK 82

Query: 62  IMKIVRHPNIVRL--------HEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
           +M   +H N+V L           L     VY    ++  G L    +         C  
Sbjct: 83  VMAKCQHENLVELLGFSSDGDDLCL-----VY---VYMPNGSL-LDRLS--------CLD 125

Query: 114 YFQQL---------IDA---VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ 161
               L           A   +   H     HRD+K  N+LLD     K+SDFGL+   ++
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK 185

Query: 162 GVELLHTT--CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG 206
             + + T+   GT  Y+APE L       S  D++S GV+L  ++ G
Sbjct: 186 FAQTVMTSRIVGTTAYMAPEALRGEITPKS--DIYSFGVVLLEIITG 230

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 69.8 bits (171), Expect = 2e-13
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           ++ +G+ IG G F  +  A      E  A  V+     ++++    +  E+   + V   
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVK----VEYQENGPLFSELKFYQRVAKK 93

Query: 70  NIVRLHEVLASRT-----KVYIILEFVTGGELFDKIVHQ--GRLLEN--DCRRYF----- 115
           + ++                Y        G  +  +V +  G  L+        F     
Sbjct: 94  DCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTV 153

Query: 116 ----QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKV--SDFGLS 156
                +++D + + H     H D+K  NLLL      +V  +D+GLS
Sbjct: 154 LQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLS 200

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 70.2 bits (172), Expect = 2e-13
 Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 23/168 (13%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            ++VG  IG+G F  +  A +  + ESV         +        +  E+   +    P
Sbjct: 36  AWKVGLPIGQGGFGCIYLA-DMNSSESVGSDAPCVVKVEPSD-NGPLFTELKFYQRAAKP 93

Query: 70  NIVRLHEVLASRT-----KVYIILEFVTGGELFDKIVHQ--GRLLE---NDCRRYF---- 115
             ++              K +        G+ +  ++    G  L+       + F    
Sbjct: 94  EQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKT 153

Query: 116 -----QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKV--SDFGLS 156
                 +++D + + H     H D+K  NLLL+     +V   D+GL+
Sbjct: 154 VLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 62.1 bits (151), Expect = 6e-11
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 35/174 (20%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETG--------ESVAMKVLAKSTILKHRMVDQIKREIS 61
           ++++           +  A    T         +  ++K+ AK   L +        E +
Sbjct: 43  QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFN--------EQN 94

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYI--ILEFVTGGELFDKIVHQ--GRLLE---NDC-RR 113
             +    P  V   + L S   + I   + F    + +  +V    GR L+   +   + 
Sbjct: 95  FFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKH 154

Query: 114 YF---------QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKV--SDFGLS 156
                       +L+DA+   H     H ++  EN+ +D     +V  + +G +
Sbjct: 155 VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFA 208

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 97  FDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS 156
             + +++  L       Y  Q+   +    S+   HRDL   N+LL     +K+ DFGL+
Sbjct: 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA 240

Query: 157 ALPQQGVELLHTTCGT-P-NYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLP 209
               +  + +       P  ++APE + +R Y    +DVWS GV+L+ + + G  P
Sbjct: 241 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASP 295

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 53.0 bits (127), Expect = 5e-08
 Identities = 37/183 (20%), Positives = 62/183 (33%), Gaps = 13/183 (7%)

Query: 12  EVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-I 65
           ++G+ +G G F +V  A         T  +VA+K+L +     H     +  E+ I+  I
Sbjct: 25  KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHI 82

Query: 66  VRHPNIVRLH-EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAH 124
             H N+V L          + +I+EF   G L   +    R   N+   Y  +       
Sbjct: 83  GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL----RSKRNEFVPYKTKGARFRQG 138

Query: 125 CHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR 184
               G    DLK     + S  +   S F          E         +++  E L   
Sbjct: 139 KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICY 198

Query: 185 GYD 187
            + 
Sbjct: 199 SFQ 201

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 7e-07
 Identities = 56/326 (17%), Positives = 104/326 (31%), Gaps = 91/326 (27%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFA-QNRETGESVA---MK-----VLAKSTILKHRMVDQI 56
           +  AKY V R      + K+R A       ++V    +       +A    L +++  ++
Sbjct: 124 QVFAKYNVSR---LQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 57  KREISIMKIVRHPNIVRLHEVLASRTKVYIILE--FVTGGELFDKIVHQGRLLENDCRRY 114
             +I  + +    N      VL    K+   ++  + +  +    I  +   ++ + RR 
Sbjct: 181 DFKIFWLNL---KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 115 FQQ-------LI-DAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL 166
            +        L+   V   ++K     +L  + LL   +    V+DF LSA     + L 
Sbjct: 238 LKSKPYENCLLVLLNV--QNAKAWNAFNLSCKILLTTRFKQ--VTDF-LSAATTTHISLD 292

Query: 167 HTTCG-TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA 225
           H +   TP     EV S                    L+  YL     DLP      N  
Sbjct: 293 HHSMTLTP----DEVKS--------------------LLLKYLDCRPQDLPREVLTTN-- 326

Query: 226 EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEV------ 279
               P        S+I + +     T           W   N+  V C +   +      
Sbjct: 327 ----PR-----RLSIIAESIRDGLAT-----------W--DNWKHVNCDKLTTIIESSLN 364

Query: 280 NLD--DVHAVFDDI----EDQYVAEQ 299
            L+  +   +FD +       ++   
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAHIPTI 390

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* Length = 282

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 24/178 (13%), Positives = 63/178 (35%), Gaps = 26/178 (14%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD-QIKRE 59
           + +  R      +G+ +GEG  + V    + +      +K          ++ + +   +
Sbjct: 82  LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEK-FGECVVKFHKVGHTSFKKVKEKRDYGD 140

Query: 60  ISIMKIVR------HPNIVRLHEVLASRTKVY----IILEFVTGGELFDKIVHQGRLLEN 109
           +    +           + +L  +   +   +    +++E +   EL+        +   
Sbjct: 141 LHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYR-------VRVE 193

Query: 110 DCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH 167
           +       +++ VA  + +G+ H DL   N+L+     + + DF       Q VE+  
Sbjct: 194 NPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFP------QSVEVGE 244

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 38/191 (19%), Positives = 66/191 (34%), Gaps = 32/191 (16%)

Query: 1   MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNR--ETGESVAMKV-------LAKSTILKHR 51
           + K + +     +G  I  G  A V +A         ++A+K+         K     + 
Sbjct: 39  LYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYG 98

Query: 52  MVDQIKREISIMKIVR------HPNIVRLHEVLASRTKVY------IILEFVTGGELFDK 99
                 R IS  + V         N+ R  E   S  + Y      +++EF+   EL   
Sbjct: 99  DERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAP 158

Query: 100 IVHQ--GRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLS 156
            + +    L E D    F  +++ V   + +  + H DL   N++      +   D G  
Sbjct: 159 TLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI--DKVYFIDMG-- 214

Query: 157 ALPQQGVELLH 167
               Q V L H
Sbjct: 215 ----QAVTLRH 221

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	379
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.94
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.88
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.8
2ehb_D	143	CBL-interacting serine/threonine-protein kinase 2;	99.73
2zfd_B	123	Putative uncharacterized protein T20L15_90; calciu	99.66
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.49
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.33
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.25
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.19
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.99
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.71
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.65
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.54
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.44
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.38
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.22
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.18
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.9
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.88
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.85
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.71
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.47
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.39
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.39
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.32
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.32
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.29
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.16
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.92
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.68
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.48
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.81
3ose_A	120	Serine/threonine-protein kinase MARK1; kinase asso	92.37
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	89.6
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	88.91
4eai_A	106	5'-AMP-activated protein kinase catalytic subunit	88.09
2y8l_A	173	5'-AMP-activated protein kinase catalytic subunit;	87.3
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	85.07
4eag_A	130	EG:132E8.2 protein; AMPK, transferase; HET: ATP TA	84.8
1v5s_A	126	MAP/microtubule affinity-regulating kinase 3; Ka1	82.87
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	81.65

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-70  Score=507.55  Aligned_cols=261  Identities=44%  Similarity=0.866  Sum_probs=224.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +..+++|++++.||+|+||+||+|+++.+|+.||||++++.........+.+.+|+.+|+.++|||||++++++.+.+.+
T Consensus         9 G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A            9 GAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             -----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CCEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence            45689999999999999999999999999999999999887666655667899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||| +|+|.+++.+.+++++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+..... .
T Consensus        89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-~  166 (275)
T 3hyh_A           89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-N  166 (275)
T ss_dssp             EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             EEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC-C
Confidence            9999999 7899999999999999999999999999999999999999999999999999999999999999765443 3


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      ...+.|||+.|+|||++.+..|++.++|||||||++|+|++|++||.+.+...+.+.+....+.+|.++|+++++||.+|
T Consensus       167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  246 (275)
T 3hyh_A          167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRM  246 (275)
T ss_dssp             --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHH
T ss_pred             ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHH
Confidence            44678999999999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCChHhHhcCcccccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      |+.||++|||++|+++||||+..
T Consensus       247 L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          247 LIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             SCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             ccCChhHCcCHHHHHcCcccccC
Confidence            99999999999999999999854

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1e-70  Score=515.02  Aligned_cols=261  Identities=31%  Similarity=0.562  Sum_probs=242.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ..+.++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.++|||||++++++.+.+.+
T Consensus        28 ~~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  107 (311)
T 4aw0_A           28 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKL  107 (311)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            34567899999999999999999999999999999999887655555668899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC--C
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--G  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~--~  162 (379)
                      |+|||||+||+|++++.+.+.++|.+++.|+.||+.||+|||++||+||||||+|||++.+|++||+|||+|+....  .
T Consensus       108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999986543  2


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                      .....+.|||+.|+|||++.+.+| +.++|||||||++|+|++|++||.+.+...++.+|....+.+|..+|+++++||.
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y-~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~  266 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVE  266 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCB-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHH
T ss_pred             cccccCcccCcccCCHHHHcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccCHHHHHHHH
Confidence            334567899999999999988877 4899999999999999999999999999999999999999999999999999999


Q ss_pred             HccCCCCCCCCChHh------HhcCccccc
Q 016991          243 KILDPNPKTRIRIEG------IRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~------il~hp~f~~  266 (379)
                      +||+.||++|||++|      |++||||+.
T Consensus       267 ~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~  296 (311)
T 4aw0_A          267 KLLVLDATKRLGCEEMEGYGPLKAHPFFES  296 (311)
T ss_dssp             HHSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             HHccCCHhHCcChHHHcCCHHHHCCCCcCC
Confidence            999999999999988      589999974

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=2.7e-68  Score=506.50  Aligned_cols=259  Identities=28%  Similarity=0.571  Sum_probs=231.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++.+..... ...+.+.+|+.+|+.++|||||++++++.+++.+|+
T Consensus        22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi  100 (350)
T 4b9d_A           22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKHPNIVQYRESFEENGSLYI  100 (350)
T ss_dssp             CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCH-HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCH-HHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence            5689999999999999999999999999999999998765433 346789999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           87 ILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |||||+||+|.+++...+  .+++.+++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.......
T Consensus       101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  180 (350)
T 4b9d_A          101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE  180 (350)
T ss_dssp             EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred             EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence            999999999999997543  578999999999999999999999999999999999999999999999999987765444


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCCHhHHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFSTGATSLIHK  243 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s~~~~~li~~  243 (379)
                      ...+.|||+.|+|||++.+..|+ .++|||||||+||+|++|++||.+.+...+..+|....+ ..+..+|+++.+||.+
T Consensus       181 ~~~~~~GT~~YmAPE~l~~~~y~-~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~  259 (350)
T 4b9d_A          181 LARACIGTPYYLSPEICENKPYN-NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQ  259 (350)
T ss_dssp             HHHHHHSCCTTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred             cccccCCCccccCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccCCHHHHHHHHH
Confidence            55678999999999999888775 899999999999999999999999999888888887765 4667899999999999


Q ss_pred             ccCCCCCCCCChHhHhcCcccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||+.||++|||++|+++||||++.
T Consensus       260 ~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          260 LFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             HTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             HccCChhHCcCHHHHhcCHHhhcC
Confidence            999999999999999999999864

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.4e-67  Score=500.94  Aligned_cols=256  Identities=27%  Similarity=0.446  Sum_probs=232.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .+.|++++.||+|+||+||+|+++.+|+.||||++++.....   .+.+.+|+.+|+.++|||||++++++.+.+.+|+|
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv  149 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  149 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            357999999999999999999999999999999998654332   35688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||||+||+|.+++.+ +++++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|...........
T Consensus       150 mEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  228 (346)
T 4fih_A          150 MEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  228 (346)
T ss_dssp             ECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBC
T ss_pred             EeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCccc
Confidence            999999999998875 6899999999999999999999999999999999999999999999999999987766555667


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCHhHHHHHHHc
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTGATSLIHKI  244 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~~~  244 (379)
                      +.|||+.|+|||++.+.+| +.++|||||||++|+|++|++||.+.+.......|.....   ..+..+|+++.+||.+|
T Consensus       229 ~~~GTp~YmAPEvl~~~~y-~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~  307 (346)
T 4fih_A          229 SLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL  307 (346)
T ss_dssp             CCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHH
T ss_pred             ccccCcCcCCHHHHCCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHH
Confidence            8899999999999988777 5999999999999999999999999988888888766532   33446899999999999


Q ss_pred             cCCCCCCCCChHhHhcCccccccC
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |+.||++|||++|+++||||+...
T Consensus       308 L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          308 LVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             SCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             cCCChhHCcCHHHHhcCHhhcCCC
Confidence            999999999999999999998654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=5.9e-68  Score=495.96  Aligned_cols=257  Identities=37%  Similarity=0.636  Sum_probs=228.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++++.||+|+||+||+|++.   .+++.||||++++....... ...+.+|+.+|+.++|||||++++++.+.+.+
T Consensus        23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~  101 (304)
T 3ubd_A           23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRD-RVRTKMERDILVEVNHPFIVKLHYAFQTEGKL  101 (304)
T ss_dssp             GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEE-CC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred             ccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHH-HHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence            468999999999999999999984   46889999999876543322 24678899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+|||||+||+|.+++.+.+.+++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+.......
T Consensus       102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  181 (304)
T 3ubd_A          102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK  181 (304)
T ss_dssp             EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----C
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999987655445


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      ...+.|||+.|+|||++.+.+|+ .++|||||||++|+|++|++||.+.+..++...|....+.+|..+|+++.+||.+|
T Consensus       182 ~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  260 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNRRGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRML  260 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHTSCCC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccccCcccCCHHHhccCCCC-CCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHH
Confidence            56788999999999999888775 89999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCC-----hHhHhcCccccc
Q 016991          245 LDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      |+.||++|||     ++|+++||||+.
T Consensus       261 L~~dP~~R~ta~~~~~~eil~Hp~f~~  287 (304)
T 3ubd_A          261 FKRNPANRLGAGPDGVEEIKRHSFFST  287 (304)
T ss_dssp             TCSSGGGSTTCSTTTHHHHHTSGGGTT
T ss_pred             cccCHHHCCCCCcCCHHHHHcCccccC
Confidence            9999999998     479999999974

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.3e-66  Score=501.62  Aligned_cols=256  Identities=27%  Similarity=0.454  Sum_probs=232.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.....   .+.+.+|+.+|+.++|||||++++++.+.+.+|+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV  226 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV  226 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS---GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH---HHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence            357999999999999999999999999999999998654332   35688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||||+||+|.+++.. +++++.+++.++.||+.||+|||++||+||||||+||||+.+|++||+|||+|...........
T Consensus       227 mEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~  305 (423)
T 4fie_A          227 MEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK  305 (423)
T ss_dssp             EECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBC
T ss_pred             EeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcccc
Confidence            999999999998865 6799999999999999999999999999999999999999999999999999987666555667


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHHHHHHc
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~~~  244 (379)
                      +.|||+.|+|||++.+..| +.++|||||||++|+|++|++||.+.+.......|....   +..+..+|+++++||.+|
T Consensus       306 ~~~GTp~YmAPEvl~~~~y-~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~  384 (423)
T 4fie_A          306 SLVGTPYWMAPELISRLPY-GPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRL  384 (423)
T ss_dssp             CCEECTTTCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHH
T ss_pred             ccccCcCcCCHHHHCCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHH
Confidence            8899999999999988777 599999999999999999999999998888888876653   334556899999999999


Q ss_pred             cCCCCCCCCChHhHhcCccccccC
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |+.||++|||++|+|+||||+...
T Consensus       385 L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          385 LVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             SCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             cCCChhHCcCHHHHhcCHHhcCCC
Confidence            999999999999999999998653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=5.8e-65  Score=473.25  Aligned_cols=254  Identities=24%  Similarity=0.444  Sum_probs=222.4

Q ss_pred             ccCe-eeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CC
Q 016991            8 VAKY-EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----RT   82 (379)
Q Consensus         8 ~~~y-~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----~~   82 (379)
                      .++| ++.+.||+|+||+||+|.+..++..||||++.+..... ...+.+.+|+.+|+.++|||||++++++.+    ..
T Consensus        24 ~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~-~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~  102 (290)
T 3fpq_A           24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK-SERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK  102 (290)
T ss_dssp             TSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCH-HHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEE
T ss_pred             CCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCH-HHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCc
Confidence            3566 78889999999999999999999999999998755433 345789999999999999999999999865    35


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEcc-CCCeEEeeeccccCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDS-YGNLKVSDFGLSALP  159 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~-~~~lkl~DfGl~~~~  159 (379)
                      .+|+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|  |+||||||+||||+. +|++||+|||+|+..
T Consensus       103 ~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          103 CIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            68999999999999999999999999999999999999999999998  999999999999984 799999999999764


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccc--CCCCCCCHh
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYKKINAAEF--SCPFWFSTG  236 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~~~i~~~~~--~~p~~~s~~  236 (379)
                      ..  ....+.|||+.|+|||++.+ .| +.++|||||||++|+|++|++||.+.+ ...+.+.+.....  .+|..++++
T Consensus       183 ~~--~~~~~~~GTp~YmAPE~~~~-~y-~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  258 (290)
T 3fpq_A          183 RA--SFAKAVIGTPEFMAPEMYEE-KY-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  258 (290)
T ss_dssp             CT--TSBEESCSSCCCCCGGGGGT-CC-CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             CC--CccCCcccCccccCHHHcCC-CC-CcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHH
Confidence            43  34567899999999999865 45 599999999999999999999997654 4566666665543  345668999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +.+||.+||+.||++|||++|+++||||++
T Consensus       259 ~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            999999999999999999999999999975

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.1e-64  Score=479.60  Aligned_cols=254  Identities=25%  Similarity=0.347  Sum_probs=224.7

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ++.|++.++||+|+||+||+|+++.+|+.||||++++....        .+|+.+|+.++|||||++++++.+.+.+|+|
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            46799999999999999999999999999999999765432        3699999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCCc---
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQGV---  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~~---  163 (379)
                      ||||+||+|.+++.+.+.+++.+++.|+.||+.||+|||++||+||||||+||||+.+| ++||+|||+|+......   
T Consensus       129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999988 69999999998654321   


Q ss_pred             --ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCHhHH
Q 016991          164 --ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTGAT  238 (379)
Q Consensus       164 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~  238 (379)
                        ....+.|||+.|+|||++.+..|+ .++|||||||++|+|++|++||.+.+...+..+|.....   .+|..+|+++.
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~  287 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMGKPCD-AKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTA  287 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHH
T ss_pred             ceecCCccccCccccCHHHHCCCCCC-cHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHH
Confidence              112346899999999999988775 899999999999999999999998887777777776654   36778999999


Q ss_pred             HHHHHccCCCCCCCCChHhH-------------hcCccccccCCC
Q 016991          239 SLIHKILDPNPKTRIRIEGI-------------RKHPWFRKNYNP  270 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~i-------------l~hp~f~~~~~~  270 (379)
                      +||.+||+.||.+|||+.|+             ++|||+.....|
T Consensus       288 ~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~P  332 (336)
T 4g3f_A          288 QAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKEP  332 (336)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCCC
T ss_pred             HHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCCC
Confidence            99999999999999999997             579999765443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-63  Score=480.87  Aligned_cols=258  Identities=28%  Similarity=0.389  Sum_probs=225.6

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------CC
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS------RT   82 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~------~~   82 (379)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+... .....+.+.+|+.+|+.++|||||++++++..      .+
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~  132 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK  132 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence            579999999999999999999999999999999976433 33445778899999999999999999999764      36


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC-
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ-  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~-  161 (379)
                      .+|+|||||+ |+|++++...+.+++.+++.+++||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.... 
T Consensus       133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~  211 (398)
T 4b99_A          133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS  211 (398)
T ss_dssp             CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred             EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence            7999999995 67999999889999999999999999999999999999999999999999999999999999976533 


Q ss_pred             ---CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC---------
Q 016991          162 ---GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC---------  229 (379)
Q Consensus       162 ---~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~---------  229 (379)
                         ......+.|||+.|+|||++.+..+++.++||||+|||+|+|++|++||.+.+.......|.......         
T Consensus       212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~  291 (398)
T 4b99_A          212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG  291 (398)
T ss_dssp             ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC---
T ss_pred             ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhh
Confidence               22345678999999999999888777899999999999999999999999998877777664322111         


Q ss_pred             ----------------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          230 ----------------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       230 ----------------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                            .+.+|+++.+||.+||+.||++|||++|+|+||||+...
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             hhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence                                  123689999999999999999999999999999998654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.6e-62  Score=498.12  Aligned_cols=260  Identities=30%  Similarity=0.462  Sum_probs=231.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHH---HHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK---REISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~---~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ...+++|++++.||+|+||+||+|+++.+|+.||||++.+...........+.   .++.+++.++|||||++++++.+.
T Consensus       185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~  264 (689)
T 3v5w_A          185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP  264 (689)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred             CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC
Confidence            56789999999999999999999999999999999999876543333333344   445667788999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +.+|+|||||+||+|++++.+.+.+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|.....
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999976544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhcccCCCCCCCHhHH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET---DLPTLYKKINAAEFSCPFWFSTGAT  238 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---~~~~~~~~i~~~~~~~p~~~s~~~~  238 (379)
                        ....+.|||+.|+|||++.+...++.++|||||||++|+|++|++||.+.   +...+.+.+....+.+|..+|++++
T Consensus       345 --~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~  422 (689)
T 3v5w_A          345 --KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR  422 (689)
T ss_dssp             --CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             --CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccCCHHHH
Confidence              33567899999999999975544469999999999999999999999764   3446677888888999999999999


Q ss_pred             HHHHHccCCCCCCCCC-----hHhHhcCccccc
Q 016991          239 SLIHKILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      +||.+||+.||.+|++     ++||++||||+.
T Consensus       423 dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~  455 (689)
T 3v5w_A          423 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  455 (689)
T ss_dssp             HHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTT
T ss_pred             HHHHHHccCCHhHCCCCCCCCHHHHhcCccccC
Confidence            9999999999999998     699999999975

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.4e-61  Score=453.61  Aligned_cols=254  Identities=26%  Similarity=0.410  Sum_probs=202.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++....  .....+.+.+|+.+|+.++|||||++++++.+.+    
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~   80 (299)
T 4g31_A            3 YLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEK   80 (299)
T ss_dssp             HHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----
T ss_pred             cchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccc
Confidence            3568999999999999999999999999999999997653  3344577999999999999999999999987543    


Q ss_pred             --------eEEEEEeccCCCChHHHHHhcCCC---CHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEe
Q 016991           83 --------KVYIILEFVTGGELFDKIVHQGRL---LENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        83 --------~~~lv~E~~~gg~L~~~l~~~~~l---~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                              .+|+|||||+||+|.+++...+.+   ++..++.++.||+.||+|||++||+||||||+|||++.+|++||+
T Consensus        81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~  160 (299)
T 4g31_A           81 LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG  160 (299)
T ss_dssp             ------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEc
Confidence                    479999999999999999876654   446688999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCcc------------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHH
Q 016991          152 DFGLSALPQQGVE------------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL-PTL  218 (379)
Q Consensus       152 DfGl~~~~~~~~~------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~  218 (379)
                      |||+|+.......            ...+.|||+.|+|||++.+..|+ .++|||||||++|+|++   ||.+... ...
T Consensus       161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~-~~~DiwSlGvilyell~---Pf~~~~~~~~~  236 (299)
T 4g31_A          161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS-HKVDIFSLGLILFELLY---PFSTQMERVRT  236 (299)
T ss_dssp             CCCCC--------------------------CCCTTSCHHHHTTCCCC-THHHHHHHHHHHHHHHS---CCSSHHHHHHH
T ss_pred             cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCC-CHHHHHHHHHHHHHHcc---CCCCccHHHHH
Confidence            9999986543211            12356899999999999887774 99999999999999996   7854322 122


Q ss_pred             HHHHHhcccC-CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          219 YKKINAAEFS-CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       219 ~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ...+....++ .+...++.+.+||.+||++||.+|||+.|+++||||+.
T Consensus       237 ~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~  285 (299)
T 4g31_A          237 LTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED  285 (299)
T ss_dssp             HHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCC
T ss_pred             HHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCC
Confidence            3333333221 11235778899999999999999999999999999974

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.2e-60  Score=458.55  Aligned_cols=252  Identities=28%  Similarity=0.465  Sum_probs=208.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~   82 (379)
                      .-++|++.+.||+|+||+||+|+++   .+++.||||++.+..     ...++.+|+.+|+.+ +|||||++++++.+.+
T Consensus        19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~   93 (361)
T 4f9c_A           19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND   93 (361)
T ss_dssp             GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred             ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence            3468999999999999999999875   467899999986542     235678999999988 6999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~~~~~  161 (379)
                      .+|+|||||+||+|.+++   +.+++.+++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+....
T Consensus        94 ~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             EEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             EEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            999999999999999988   469999999999999999999999999999999999999877 7999999999964332


Q ss_pred             C----------------------------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          162 G----------------------------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       162 ~----------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                      .                            .....+.|||+.|+|||++.+..+++.++||||+|||+|+|++|+.||...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~  250 (361)
T 4f9c_A          171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA  250 (361)
T ss_dssp             CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence            1                            112345689999999999988776679999999999999999999999543


Q ss_pred             C-hHHHHHHHHh--------------------------------------cccC----------------CCCCCCHhHH
Q 016991          214 D-LPTLYKKINA--------------------------------------AEFS----------------CPFWFSTGAT  238 (379)
Q Consensus       214 ~-~~~~~~~i~~--------------------------------------~~~~----------------~p~~~s~~~~  238 (379)
                      + .......|..                                      ....                ....+|++++
T Consensus       251 ~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~  330 (361)
T 4f9c_A          251 SDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAY  330 (361)
T ss_dssp             SSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHH
T ss_pred             CCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHH
Confidence            3 2222222211                                      0001                1124789999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      |||++||+.||++|||++|+|+||||+.
T Consensus       331 DLl~~lL~~dP~~R~ta~eaL~Hp~f~~  358 (361)
T 4f9c_A          331 DLLDKLLDLNPASRITAEEALLHPFFKD  358 (361)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred             HHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence            9999999999999999999999999974

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.4e-60  Score=480.42  Aligned_cols=261  Identities=30%  Similarity=0.612  Sum_probs=236.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||+||+|+++.+|+.||||++.+..   ....+.+.+|+.+|+.++|||||++++++.+.+.+|
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~  230 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV  230 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            45689999999999999999999999999999999997643   223467899999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC--CCeEEeeeccccCCCCC
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQG  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~--~~lkl~DfGl~~~~~~~  162 (379)
                      +|||||+||+|++++.. .+.+++.+++.|+.||+.||+|||++||+||||||+|||++.+  |.+||+|||+|......
T Consensus       231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            99999999999999964 4689999999999999999999999999999999999999854  89999999999876543


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGAT  238 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~  238 (379)
                       ....+.|||+.|+|||++.+..| +.++|||||||++|+|++|.+||.+.+.......|....+.+|    ..+|++++
T Consensus       311 -~~~~~~~GT~~y~APEv~~~~~y-~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  388 (573)
T 3uto_A          311 -QSVKVTTGTAEFAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK  388 (573)
T ss_dssp             -SEEEEECSSGGGCCHHHHTTCCB-CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHH
T ss_pred             -CceeeeEECccccCHHHhCCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHH
Confidence             44567899999999999998877 5899999999999999999999999999999999988876655    35899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCccccccCCCC
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                      +||.+||+.||.+|||++|+|+||||+....+.
T Consensus       389 dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~~~  421 (573)
T 3uto_A          389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPG  421 (573)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSTTTSCCCCTT
T ss_pred             HHHHHHccCChhHCcCHHHHhcCcCcCCCCCCC
Confidence            999999999999999999999999999765543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.1e-59  Score=465.75  Aligned_cols=265  Identities=44%  Similarity=0.843  Sum_probs=244.8

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      .+...+++|.+++.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+
T Consensus        10 ~~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~   89 (476)
T 2y94_A           10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS   89 (476)
T ss_dssp             CSCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             CCCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            45678999999999999999999999999999999999998765443345578999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||++......
T Consensus        90 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A           90 DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             EEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            99999999999999999988889999999999999999999999999999999999999999999999999999765443


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                       ....+.+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.+.+...+..++....+..|..+++++.+||.
T Consensus       170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~Li~  248 (476)
T 2y94_A          170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLK  248 (476)
T ss_dssp             -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCCTTCCHHHHHHHH
T ss_pred             -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCCccCCHHHHHHHH
Confidence             3456779999999999998887777899999999999999999999999998899999999989999999999999999


Q ss_pred             HccCCCCCCCCChHhHhcCccccccC
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      +||+.||.+|||++++++||||+...
T Consensus       249 ~~L~~dP~~Rpt~~eil~hp~~~~~~  274 (476)
T 2y94_A          249 HMLQVDPMKRATIKDIREHEWFKQDL  274 (476)
T ss_dssp             HHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred             HHcCCCchhCcCHHHHHhCHHhhhcC
Confidence            99999999999999999999998654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=5.7e-60  Score=442.21  Aligned_cols=254  Identities=23%  Similarity=0.341  Sum_probs=221.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|.+.+.||+|+||+||+|++.     .+|..||||+++..   .....+.+.+|+.+|++++|||||++++++.+
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~   86 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE   86 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEee
Confidence            44578999999999999999999875     36789999999653   33455789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ-------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN  147 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~-------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~  147 (379)
                      .+.+|+|||||+||+|.+++...             ..+++.++..++.||+.||.|||+++|+||||||+|||++.+++
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~  166 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  166 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCc
Confidence            99999999999999999999764             36999999999999999999999999999999999999999999


Q ss_pred             eEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q 016991          148 LKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINA  224 (379)
Q Consensus       148 lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~  224 (379)
                      +||+|||+|+.......  .....+||+.|+|||++.+..|+ .++||||+||+||||++ |+.||.+.+..++...+..
T Consensus       167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~-~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~  245 (299)
T 4asz_A          167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFT-TESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ  245 (299)
T ss_dssp             EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred             EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCC-chhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            99999999975443221  22345799999999999887774 99999999999999998 9999999988888888876


Q ss_pred             cc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          225 AE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       225 ~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      +. ...|..+|+++.+||.+||+.||++|||+++|  ++|++
T Consensus       246 ~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~  285 (299)
T 4asz_A          246 GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQ  285 (299)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHH
T ss_pred             CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHH
Confidence            65 56788899999999999999999999999998  45665

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.8e-58  Score=437.45  Aligned_cols=263  Identities=41%  Similarity=0.765  Sum_probs=244.0

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ....+++|++.+.||+|+||.||+|.+..+|+.||||++.+... .....+.+.+|+.+|+.++||||+++++++.+.+.
T Consensus        10 ~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~   88 (328)
T 3fe3_A           10 EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT   88 (328)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCE
Confidence            45678999999999999999999999999999999999987543 33456778999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|.+++...+++++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||++...... 
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-  167 (328)
T 3fe3_A           89 LYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-  167 (328)
T ss_dssp             EEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred             EEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence            9999999999999999999899999999999999999999999999999999999999999999999999998765443 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ......+||+.|+|||++.+..+++.++||||+||++|+|++|..||.+.+...+...+....+..|..+|+++.+||++
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  247 (328)
T 3fe3_A          168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYMSTDCENLLKR  247 (328)
T ss_dssp             CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            34567789999999999998888778999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCChHhHhcCccccccC
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ||+.||.+|||++|+++||||+...
T Consensus       248 ~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          248 FLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             HCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             HCCCChhHCcCHHHHhcCHhhcCCC
Confidence            9999999999999999999998654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=7.9e-59  Score=440.16  Aligned_cols=251  Identities=22%  Similarity=0.326  Sum_probs=214.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ...+|.+.+.||+|+||+||+|++.     .++..||||+++..   .....+.+.+|+.+|+.++|||||++++++.+.
T Consensus        39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~  115 (329)
T 4aoj_A           39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEG  115 (329)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3467899999999999999999865     46889999999653   334557899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ---------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~---------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~  146 (379)
                      +.+|+|||||++|+|.+++...               +++++.++..++.||+.||.|||+++|+||||||+||||+.++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~  195 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL  195 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCC
Confidence            9999999999999999999753               3589999999999999999999999999999999999999999


Q ss_pred             CeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 016991          147 NLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKIN  223 (379)
Q Consensus       147 ~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~  223 (379)
                      ++||+|||+++......  ......+||+.|+|||++.+..| +.++|||||||+||||++ |+.||.+.+..+....+.
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~-~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~  274 (329)
T 4aoj_A          196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKF-TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT  274 (329)
T ss_dssp             EEEECCCC----------------CCCCGGGCCHHHHTTCCC-CHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH
T ss_pred             cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCC-CccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            99999999998654322  22345689999999999988777 499999999999999998 999999988888877776


Q ss_pred             hc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          224 AA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       224 ~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+ .+..|..+|+++.+||.+||+.||++|||++||+++
T Consensus       275 ~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          275 QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            64 467888999999999999999999999999999874

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.8e-59  Score=436.68  Aligned_cols=254  Identities=23%  Similarity=0.359  Sum_probs=222.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      ....+++++.+.||+|+||+||+|...     .+++.||||++....  .....+.+.+|+.+|++++|||||++++++.
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~   99 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVT   99 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence            455678999999999999999999864     467899999996543  2234578999999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD  143 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~  143 (379)
                      +.+.+|+|||||++|+|.+++...                ..+++.++..++.||+.||+|||+++|+||||||+||||+
T Consensus       100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~  179 (308)
T 4gt4_A          100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY  179 (308)
T ss_dssp             SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence            999999999999999999999643                3589999999999999999999999999999999999999


Q ss_pred             cCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 016991          144 SYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYK  220 (379)
Q Consensus       144 ~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~  220 (379)
                      +++++||+|||+++......  ......+||+.|+|||++.+..| +.++||||+||+||||++ |..||.+.+..++..
T Consensus       180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~-s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~  258 (308)
T 4gt4_A          180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE  258 (308)
T ss_dssp             GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred             CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCC-CccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999999997654322  23456789999999999988777 499999999999999998 899999998888888


Q ss_pred             HHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          221 KINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       221 ~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+..+. .+.|..+++++.+|+.+||+.||++|||+.||+++
T Consensus       259 ~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          259 MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            877654 46788899999999999999999999999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-58  Score=433.40  Aligned_cols=250  Identities=20%  Similarity=0.316  Sum_probs=205.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..+++++++.||+|+||+||+|++.   ..||||+++.... .....+.+.+|+.+|+.++|||||++++++.. +.+|+
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i  108 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI  108 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence            3467889999999999999999864   3699999865432 34456789999999999999999999998764 56899


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--c
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--V  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--~  163 (379)
                      |||||+||+|.+++... +++++.++..++.||+.||+|||++||+||||||+||||++++++||+|||+|+.....  .
T Consensus       109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred             EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence            99999999999999754 57999999999999999999999999999999999999999999999999999865432  2


Q ss_pred             ccccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhccc-----CCCCCCCH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL-YKKINAAEF-----SCPFWFST  235 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~-~~~i~~~~~-----~~p~~~s~  235 (379)
                      ....+.+||+.|+|||++.+.  +.++.++|||||||+||||++|+.||.+.+.... ...+.....     ..|..+|+
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  268 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPK  268 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCH
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchH
Confidence            344567999999999999643  2245899999999999999999999988665443 333333221     24556899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.+||.+||+.||++|||+.+++++
T Consensus       269 ~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          269 AMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999987643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=7.6e-58  Score=438.70  Aligned_cols=261  Identities=34%  Similarity=0.620  Sum_probs=234.0

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...+++|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~   98 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR   98 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCE
Confidence            45678999999999999999999999999999999999876554555567788999999988 69999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.......
T Consensus        99 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A           99 LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999998655444


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ....+.|||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+...++..|......+|.++++++.+||++
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  257 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLY-GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKS  257 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHC-TTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             ccccccCCCcCeEChhhcCCCCc-CCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            55667899999999999987776 48999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCh------HhHhcCccccc
Q 016991          244 ILDPNPKTRIRI------EGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~------~~il~hp~f~~  266 (379)
                      ||+.||.+||++      +++++||||+.
T Consensus       258 lL~~dP~~R~~~~~~~~~~~il~hp~f~~  286 (353)
T 3txo_A          258 FMTKNPTMRLGSLTQGGEHAILRHPFFKE  286 (353)
T ss_dssp             HTCSSGGGSTTSGGGTCTHHHHTSGGGTT
T ss_pred             HhhhCHHHccCCcccCCHHHHhhCCcccC
Confidence            999999999999      89999999975

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.6e-57  Score=432.26  Aligned_cols=260  Identities=33%  Similarity=0.587  Sum_probs=240.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.+|
T Consensus         2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            46789999999999999999999999999999999998765434445577889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.........
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence            99999999999999998899999999999999999999999999999999999999999999999999999865444445


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHcc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  245 (379)
                      ..+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+...+...+......+|..+|+++.+||.+||
T Consensus       162 ~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL  240 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCB-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             ccccccChhhCChhhhcCCCC-CchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHh
Confidence            567899999999999987766 5899999999999999999999999998899999998999999999999999999999


Q ss_pred             CCCCCCCC-----ChHhHhcCccccc
Q 016991          246 DPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       246 ~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +.||.+||     +++++++||||+.
T Consensus       241 ~~dP~~R~g~~~~~~~ei~~h~~f~~  266 (337)
T 1o6l_A          241 KKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             hcCHHHhcCCCCCCHHHHHcCCCcCC
Confidence            99999999     8999999999974

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.8e-58  Score=438.79  Aligned_cols=266  Identities=44%  Similarity=0.862  Sum_probs=240.4

Q ss_pred             CCccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         1 m~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      |.-....+++|++.+.||+|+||+||+|.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++.+
T Consensus         1 M~i~~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~   80 (336)
T 3h4j_B            1 MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT   80 (336)
T ss_dssp             ---CCSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             CCcCccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence            55567889999999999999999999999999999999999976544333344678999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      .+..|+||||+ +|+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        81 ~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~  159 (336)
T 3h4j_B           81 PTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT  159 (336)
T ss_dssp             SSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred             CCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence            99999999999 78999999988999999999999999999999999999999999999999999999999999998665


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHH
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL  240 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  240 (379)
                      .. ....+.+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.+.......+.+....+..|..+|+++.+|
T Consensus       160 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  238 (336)
T 3h4j_B          160 DG-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLSPGAQSL  238 (336)
T ss_dssp             TS-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSCHHHHHH
T ss_pred             CC-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence            43 34567789999999999988777678999999999999999999999988777777777777788899999999999


Q ss_pred             HHHccCCCCCCCCChHhHhcCccccccC
Q 016991          241 IHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |++||+.||.+|||++|+++||||+...
T Consensus       239 i~~~L~~dP~~Rpt~~eil~hp~~~~~~  266 (336)
T 3h4j_B          239 IRRMIVADPMQRITIQEIRRDPWFNVNL  266 (336)
T ss_dssp             HHTTSCSSGGGSCCHHHHTTCHHHHTTC
T ss_pred             HHHHcCCChhHCcCHHHHHhChhhccCC
Confidence            9999999999999999999999998654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.1e-57  Score=431.56  Aligned_cols=261  Identities=30%  Similarity=0.581  Sum_probs=238.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...+++|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+..|..+++.+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            45788999999999999999999999999999999999876543334456788899999876 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.......
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999998654444


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+...+...+......+|.++|+++.+||.+
T Consensus       173 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  251 (345)
T 1xjd_A          173 AKTNTFCGTPDYIAPEILLGQKY-NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVK  251 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHH
T ss_pred             CcccCCCCCcccCChhhhcCCCC-CChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccCHHHHHHHHH
Confidence            45567899999999999988776 59999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCCCChH-hHhcCccccc
Q 016991          244 ILDPNPKTRIRIE-GIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~~-~il~hp~f~~  266 (379)
                      ||+.||.+||++. ++++||||+.
T Consensus       252 lL~~dp~~R~~~~~~i~~hp~f~~  275 (345)
T 1xjd_A          252 LFVREPEKRLGVRGDIRQHPLFRE  275 (345)
T ss_dssp             HSCSSGGGSBTTBSCGGGSGGGTT
T ss_pred             HhcCCHhHcCCChHHHHcCccccC
Confidence            9999999999998 9999999975

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-56  Score=422.14  Aligned_cols=258  Identities=33%  Similarity=0.689  Sum_probs=237.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...+++|++.+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+...+
T Consensus         2 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~   81 (318)
T 1fot_A            2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQI   81 (318)
T ss_dssp             -CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEE
T ss_pred             CCChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEE
Confidence            35678999999999999999999999999999999999876544334457788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++.....   
T Consensus        82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~---  158 (318)
T 1fot_A           82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---  158 (318)
T ss_dssp             EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred             EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC---
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999876543   


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      ...+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....+..+......+|..+++++.+||.+|
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~l  237 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVSTKPY-NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRL  237 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCB-CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccccccCCccccCHhHhcCCCC-CcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHH
Confidence            2346789999999999987776 489999999999999999999999999889999999999999999999999999999


Q ss_pred             cCCCCCCCC-----ChHhHhcCccccc
Q 016991          245 LDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      |..||++||     +++++++||||+.
T Consensus       238 L~~dp~~R~~~~~~~~~~i~~hp~f~~  264 (318)
T 1fot_A          238 ITRDLSQRLGNLQNGTEDVKNHPWFKE  264 (318)
T ss_dssp             TCSCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             hccCHHHcCCCcCCCHHHHhcCccccC
Confidence            999999999     8999999999975

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.9e-56  Score=434.67  Aligned_cols=261  Identities=32%  Similarity=0.596  Sum_probs=234.0

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...+++|++++.||+|+||+||+|+++.+++.||||++.+.........+.+.+|..+++.+ +||||+++++++.+.+.
T Consensus        48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~  127 (396)
T 4dc2_A           48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR  127 (396)
T ss_dssp             -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence            35578999999999999999999999999999999999887655555556788999999876 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++.......
T Consensus       128 ~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  207 (396)
T 4dc2_A          128 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  207 (396)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999998644444


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC---------ChHHHHHHHHhcccCCCCCCC
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET---------DLPTLYKKINAAEFSCPFWFS  234 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---------~~~~~~~~i~~~~~~~p~~~s  234 (379)
                      ....+.|||+.|+|||++.+..+ +.++|||||||++|+|++|++||...         ....+.+.+....+.+|..+|
T Consensus       208 ~~~~~~~gt~~Y~aPE~l~~~~~-~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s  286 (396)
T 4dc2_A          208 DTTSTFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS  286 (396)
T ss_dssp             CCBCCCCBCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTSC
T ss_pred             CccccccCCcccCCchhhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcCC
Confidence            55677899999999999988776 59999999999999999999999632         234567788888899999999


Q ss_pred             HhHHHHHHHccCCCCCCCCCh------HhHhcCccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRI------EGIRKHPWFRK  266 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~------~~il~hp~f~~  266 (379)
                      +++.+||++||+.||.+||++      ++|++||||+.
T Consensus       287 ~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~  324 (396)
T 4dc2_A          287 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  324 (396)
T ss_dssp             HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred             HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence            999999999999999999995      79999999975

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=5.9e-56  Score=424.34  Aligned_cols=261  Identities=32%  Similarity=0.596  Sum_probs=237.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...+++|++++.||+|+||.||+|++..+|+.||||++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus         5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~   84 (345)
T 3a8x_A            5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR   84 (345)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             CCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE
Confidence            45688999999999999999999999999999999999887766666678899999999987 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++.......
T Consensus        85 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           85 LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999998644433


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCC---------CChHHHHHHHHhcccCCCCCCC
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE---------TDLPTLYKKINAAEFSCPFWFS  234 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~---------~~~~~~~~~i~~~~~~~p~~~s  234 (379)
                      ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..         .....+.+.+......+|..+|
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~s  243 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDY-GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS  243 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTSC
T ss_pred             CcccccCCCccccCccccCCCCC-ChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCCC
Confidence            45567899999999999988776 5999999999999999999999965         2344567778888888999999


Q ss_pred             HhHHHHHHHccCCCCCCCCCh------HhHhcCccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRI------EGIRKHPWFRK  266 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~------~~il~hp~f~~  266 (379)
                      +++.+||.+||+.||.+||++      +++++||||+.
T Consensus       244 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~  281 (345)
T 3a8x_A          244 VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN  281 (345)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence            999999999999999999996      89999999974

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.1e-56  Score=428.66  Aligned_cols=262  Identities=29%  Similarity=0.560  Sum_probs=238.3

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~   82 (379)
                      ....+++|++++.||+|+||+||+|++..+|+.||||++.+.........+.+.+|..++..+ +||||+++++++.+.+
T Consensus        15 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           15 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             ----CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS
T ss_pred             CCCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC
Confidence            346788999999999999999999999999999999999876544444557788999999987 7999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++......
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence            99999999999999999998899999999999999999999999999999999999999999999999999999865444


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                      .....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+...+++.+....+.+|..+|+++.+||.
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  253 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICK  253 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCB-STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred             CcccccccCCccccChhhhcCCCc-CCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            445567899999999999987776 5999999999999999999999999999999999999999999999999999999


Q ss_pred             HccCCCCCCCCC-----hHhHhcCccccc
Q 016991          243 KILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       243 ~~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      +||..||.+||+     +++|++||||+.
T Consensus       254 ~lL~~dP~~R~~~~~~~~~~i~~h~~f~~  282 (353)
T 2i0e_A          254 GLMTKHPGKRLGCGPEGERDIKEHAFFRY  282 (353)
T ss_dssp             HHTCSCTTSCTTCSTTHHHHHHTSGGGTT
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCccccC
Confidence            999999999995     699999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=6.1e-57  Score=430.75  Aligned_cols=252  Identities=22%  Similarity=0.360  Sum_probs=216.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||+||+|.+..+     ++.||||++....  .....+.+.+|+.+|+.++| ||||++++++..
T Consensus        62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~  139 (353)
T 4ase_A           62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK  139 (353)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence            346899999999999999999997654     3689999987643  23345779999999999975 899999999865


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc
Q 016991           81 -RTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD  143 (379)
Q Consensus        81 -~~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~  143 (379)
                       .+.+|+|||||++|+|.++|...                ..+++.++..++.||+.||+|||+++|+||||||+|||++
T Consensus       140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~  219 (353)
T 4ase_A          140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS  219 (353)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC
Confidence             46799999999999999999753                3489999999999999999999999999999999999999


Q ss_pred             cCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHH
Q 016991          144 SYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP-TLY  219 (379)
Q Consensus       144 ~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~-~~~  219 (379)
                      .++++||+|||+|+.......  ...+.+||+.|+|||++.+..|+ .++|||||||+||||++ |..||.+.+.. .+.
T Consensus       220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~-~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~  298 (353)
T 4ase_A          220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT-IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  298 (353)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH
T ss_pred             CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCC-CcccEeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999986544322  23456899999999999887774 99999999999999998 99999886643 444


Q ss_pred             HHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          220 KKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       220 ~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +.+..+ .+..|..+++++.+||.+||+.||++|||+++|++|
T Consensus       299 ~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          299 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            455443 467888999999999999999999999999999987

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=8.3e-56  Score=424.11  Aligned_cols=259  Identities=32%  Similarity=0.643  Sum_probs=239.7

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ....+++|++++.||+|+||.||+|++..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        36 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  115 (350)
T 1rdq_E           36 NTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN  115 (350)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cCCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            34678999999999999999999999999999999999987654444456788999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++...... 
T Consensus       116 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-  194 (350)
T 1rdq_E          116 LYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred             EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence            9999999999999999998899999999999999999999999999999999999999999999999999999765432 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                        ..+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....+..+......+|..+++++.+||.+
T Consensus       195 --~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~  271 (350)
T 1rdq_E          195 --TWTLCGTPEALAPEIILSKGY-NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN  271 (350)
T ss_dssp             --BCCCEECGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHH
T ss_pred             --cccccCCccccCHHHhcCCCC-CCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence              346789999999999988776 48999999999999999999999999988999999999999999999999999999


Q ss_pred             ccCCCCCCCCC-----hHhHhcCccccc
Q 016991          244 ILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ||+.||.+||+     +++|++||||+.
T Consensus       272 lL~~dp~~R~~~~~~~~~ei~~h~~f~~  299 (350)
T 1rdq_E          272 LLQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             HSCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             HhhcCHHhccCCccCCHHHHHhCcCcCC
Confidence            99999999998     999999999974

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=3.1e-55  Score=421.78  Aligned_cols=260  Identities=35%  Similarity=0.599  Sum_probs=234.0

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++++.||+|+||.||+|.+..+|+.||||++.+......   ...+.+.+|+.+|+.++||||+++++++.+.
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~   87 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR   87 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC
Confidence            4556789999999999999999999999999999999987543221   1246789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC----CeEEeeecccc
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG----NLKVSDFGLSA  157 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~----~lkl~DfGl~~  157 (379)
                      +.+|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++.
T Consensus        88 ~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence            99999999999999999998888999999999999999999999999999999999999998877    79999999997


Q ss_pred             CCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCC
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWF  233 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~  233 (379)
                      ..... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.......+....+.++    ..+
T Consensus       168 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (361)
T 2yab_A          168 EIEDG-VEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT  245 (361)
T ss_dssp             ECCTT-CCCCCCCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred             EcCCC-CccccCCCCccEECchHHcCCCC-CccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCC
Confidence            65443 23456789999999999987666 5999999999999999999999999998888888888877665    458


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      |+++.+||.+||..||.+|||++|+++||||+.
T Consensus       246 s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  278 (361)
T 2yab_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (361)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSC
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCC
Confidence            999999999999999999999999999999974

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.7e-55  Score=425.21  Aligned_cols=261  Identities=32%  Similarity=0.557  Sum_probs=230.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI-MKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~-l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ....++|++++.||+|+||+||+|+++.++..||||++.+...........+.+|..+ ++.++||||+++++++.+.+.
T Consensus        34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~  113 (373)
T 2r5t_A           34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK  113 (373)
T ss_dssp             TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred             CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence            4567899999999999999999999999999999999988766555555667778777 577899999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.......
T Consensus       114 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999997644433


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+...+++.|......+|..+++++.+||.+
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  272 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPY-DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEG  272 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSSSCHHHHHHHHH
T ss_pred             CccccccCCccccCHHHhCCCCC-CchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            45567899999999999988776 48999999999999999999999999999999999998889999999999999999


Q ss_pred             ccCCCCCCCCCh----HhHhcCccccc
Q 016991          244 ILDPNPKTRIRI----EGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~----~~il~hp~f~~  266 (379)
                      ||+.||.+||++    .++++||||+.
T Consensus       273 lL~~dp~~R~~~~~~~~~i~~h~~f~~  299 (373)
T 2r5t_A          273 LLQKDRTKRLGAKDDFMEIKSHVFFSL  299 (373)
T ss_dssp             HTCSSGGGSTTTTTTHHHHHTSGGGTT
T ss_pred             HcccCHHhCCCCCCCHHHHhCCccccC
Confidence            999999999997    69999999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=7.3e-55  Score=422.09  Aligned_cols=262  Identities=27%  Similarity=0.519  Sum_probs=235.8

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      +...+++|++++.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.+|+.++||||+++++++.+.+.
T Consensus        10 ~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~   89 (384)
T 4fr4_A           10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED   89 (384)
T ss_dssp             CCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            45678999999999999999999999999999999999987655444556788999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++...... 
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-  168 (384)
T 4fr4_A           90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-  168 (384)
T ss_dssp             EEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred             EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence            9999999999999999998889999999999999999999999999999999999999999999999999999765433 


Q ss_pred             ccccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHhcccCCCCCCCHhHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGET---DLPTLYKKINAAEFSCPFWFSTGAT  238 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~---~~~~~~~~i~~~~~~~p~~~s~~~~  238 (379)
                      ....+.+||+.|+|||++.+.  ..++.++|||||||++|+|++|..||...   ........+......+|..+|+++.
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~s~~~~  248 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMV  248 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTSCHHHH
T ss_pred             CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcCCHHHH
Confidence            345677899999999999642  22358999999999999999999999743   4456667777888889999999999


Q ss_pred             HHHHHccCCCCCCCCC-hHhHhcCccccc
Q 016991          239 SLIHKILDPNPKTRIR-IEGIRKHPWFRK  266 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s-~~~il~hp~f~~  266 (379)
                      +||.+||+.||.+||+ ++++++||||+.
T Consensus       249 ~li~~lL~~dP~~R~s~~~~l~~hp~f~~  277 (384)
T 4fr4_A          249 SLLKKLLEPNPDQRFSQLSDVQNFPYMND  277 (384)
T ss_dssp             HHHHHHSCSSGGGSCCSHHHHHTSGGGTT
T ss_pred             HHHHHHhcCCHhHhcccHHHHHcChhhhc
Confidence            9999999999999998 899999999974

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.1e-54  Score=428.73  Aligned_cols=261  Identities=38%  Similarity=0.709  Sum_probs=234.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +...++|++++.||+|+||.||+|.+..+|+.||+|++.+.... ....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   85 (444)
T 3soa_A            7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH   85 (444)
T ss_dssp             CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred             ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence            34567999999999999999999999999999999999875543 33456789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc---cCCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD---SYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~---~~~~lkl~DfGl~~~~~~  161 (379)
                      |+||||++||+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.....
T Consensus        86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            99999999999999999999999999999999999999999999999999999999998   457899999999987665


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~  237 (379)
                      ........+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.......+....+.+|.    .+|+++
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~-~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  244 (444)
T 3soa_A          166 EQQAWFGFAGTPGYLSPEVLRKDPY-GKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA  244 (444)
T ss_dssp             TCCBCCCSCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred             CCceeecccCCcccCCHHHhcCCCC-CCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHH
Confidence            5455567789999999999987666 58999999999999999999999999988899988888766553    479999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||.+||+.||.+|||+.|+++||||+..
T Consensus       245 ~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          245 KDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             HHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            999999999999999999999999999753

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=5e-55  Score=431.87  Aligned_cols=260  Identities=34%  Similarity=0.589  Sum_probs=228.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||.||+|.+..+|+.||||++.+...........+.+|+.+++.++||||+++++++...+.+|
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEE
Confidence            45689999999999999999999999999999999998765444455567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +||||++||+|.+++...+.+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++........
T Consensus       225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  304 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA  304 (446)
T ss_dssp             EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred             EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence            999999999999999988999999999999999999999998 9999999999999999999999999999986554445


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+......+|..+++++.+||.+|
T Consensus       305 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~  383 (446)
T 4ejn_A          305 TMKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGL  383 (446)
T ss_dssp             --CCSSSCGGGCCHHHHHTSCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHH
T ss_pred             ccccccCCccccCHhhcCCCCC-CCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH
Confidence            5667899999999999987776 599999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCC-----ChHhHhcCccccc
Q 016991          245 LDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      |+.||.+||     |++++++||||+.
T Consensus       384 L~~dP~~R~~~~~~t~~ell~hp~f~~  410 (446)
T 4ejn_A          384 LKKDPKQRLGGGSEDAKEIMQHRFFAG  410 (446)
T ss_dssp             TCSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             cccCHHHhCCCCCCCHHHHHhCccccC
Confidence            999999999     9999999999974

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.6e-54  Score=411.23  Aligned_cols=262  Identities=34%  Similarity=0.612  Sum_probs=225.4

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILK-HRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      .....++|++.+.||+|+||.||+|++.   .+|+.||||++.+..... ......+.+|+.+|+.++||||+++++++.
T Consensus        12 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   91 (327)
T 3a62_A           12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ   91 (327)
T ss_dssp             -CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE
Confidence            3566789999999999999999999985   689999999997754322 223456889999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ..+.+|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           92 TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             CSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            99999999999999999999998899999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHH
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS  239 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~  239 (379)
                      ..........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+......+|..+++++.+
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~  250 (327)
T 3a62_A          172 IHDGTVTHTFCGTIEYMAPEILMRSGH-NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARD  250 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCC-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTSCHHHHH
T ss_pred             ccCCccccccCCCcCccCHhhCcCCCC-CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            444344556789999999999987766 5899999999999999999999999998888888988888999999999999


Q ss_pred             HHHHccCCCCCCCC-----ChHhHhcCccccc
Q 016991          240 LIHKILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       240 li~~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      ||.+||+.||.+||     +++++++||||+.
T Consensus       251 li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~  282 (327)
T 3a62_A          251 LLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH  282 (327)
T ss_dssp             HHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSS
T ss_pred             HHHHHHhcCHhhccCCCCCCHHHHHcCCcccC
Confidence            99999999999999     8899999999974

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=3.3e-54  Score=403.66  Aligned_cols=258  Identities=26%  Similarity=0.430  Sum_probs=228.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +...++|++.+.||+|+||+||+|.+..+|+.||||++.......   .+.+.+|+.+++.++||||+++++++...+..
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   92 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDEL   92 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccH---HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEE
Confidence            345678999999999999999999999999999999997654332   35688999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||++||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             EEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEEEECCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence            999999999999998876 5799999999999999999999999999999999999999999999999999876655444


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLI  241 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li  241 (379)
                      .....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.+.+.......+...   ....|..+++.+.+||
T Consensus       172 ~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  250 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL  250 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHCSCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHH
T ss_pred             ccCCccCCcCccChhhhcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHH
Confidence            5566789999999999988776 58999999999999999999999888766555444332   3445677899999999


Q ss_pred             HHccCCCCCCCCChHhHhcCcccccc
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||+.||.+|||++++++||||+..
T Consensus       251 ~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          251 NRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHccCChhHCcCHHHHhhChhhccc
Confidence            99999999999999999999999753

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.1e-54  Score=416.28  Aligned_cols=260  Identities=39%  Similarity=0.720  Sum_probs=233.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .....++|++.+.||+|+||.||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~  102 (362)
T 2bdw_A           24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESF  102 (362)
T ss_dssp             CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCE
Confidence            344557899999999999999999999999999999999875543 3345779999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQ  160 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~~~  160 (379)
                      .|+||||++||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++....
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          103 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            999999999999999999888999999999999999999999999999999999999998654   59999999997655


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHh
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTG  236 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~  236 (379)
                      .. ......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.......+....+.+|.    .++++
T Consensus       183 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  260 (362)
T 2bdw_A          183 DS-EAWHGFAGTPGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPE  260 (362)
T ss_dssp             TC-CSCCCSCSCTTTCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHH
T ss_pred             CC-cccccCCCCccccCHHHHccCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHH
Confidence            43 33456789999999999987666 48999999999999999999999999888888888887766553    47999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +.+||.+||+.||.+|||+.++++||||..
T Consensus       261 ~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          261 AKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            999999999999999999999999999974

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.3e-54  Score=400.22  Aligned_cols=264  Identities=36%  Similarity=0.665  Sum_probs=236.9

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ++....+++|++++.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++.++||||+++++++.+.
T Consensus         2 k~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   81 (279)
T 3fdn_A            2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA   81 (279)
T ss_dssp             --CCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CcceeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC
Confidence            45677899999999999999999999999999999999999775544444456789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +..|+||||+++++|.+.+.....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~  161 (279)
T 3fdn_A           82 TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  161 (279)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence            99999999999999999999889999999999999999999999999999999999999999999999999998865433


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI  241 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li  241 (379)
                      .  .....+|++.|+|||++.+..+ +.++||||||+++|+|++|..||...+.......+.......|..+++++.+||
T Consensus       162 ~--~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  238 (279)
T 3fdn_A          162 S--RRTDLCGTLDYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLI  238 (279)
T ss_dssp             --------CCCCTTCCHHHHTTCCC-CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHH
T ss_pred             c--cccccCCCCCccCHhHhccCCC-CccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHH
Confidence            2  2345679999999999977655 589999999999999999999999999888889999888999999999999999


Q ss_pred             HHccCCCCCCCCChHhHhcCccccccC
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||+.||.+|||++++++||||+...
T Consensus       239 ~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          239 SRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             HHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             HHHhccChhhCCCHHHHhhCccccCCc
Confidence            999999999999999999999998754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.7e-54  Score=402.49  Aligned_cols=258  Identities=33%  Similarity=0.492  Sum_probs=220.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||+||+|.+..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence            4789999999999999999999999999999999976543 333457788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+++ ++.+.+. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        80 ~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           80 FEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred             EecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence            999976 5555554 46789999999999999999999999999999999999999999999999999998765544555


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHhcc-------------------
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLP-FGETDLPTLYKKINAAE-------------------  226 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~P-f~~~~~~~~~~~i~~~~-------------------  226 (379)
                      ...+||+.|+|||++.+....+.++||||+||++|+|++|..| |.+.+.......+....                   
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP  238 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence            6678999999999998777567999999999999999987766 55655555555443210                   


Q ss_pred             ----------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 ----------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ----------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                ...+..+++++++||.+||+.||++|||++|+++||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence                      01123478999999999999999999999999999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=7.2e-55  Score=425.62  Aligned_cols=261  Identities=32%  Similarity=0.552  Sum_probs=230.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.+|
T Consensus        66 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            45679999999999999999999999999999999997754333323345889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-c
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-E  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~  164 (379)
                      +||||++||+|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++....... .
T Consensus       146 lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~  224 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV  224 (410)
T ss_dssp             EEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred             EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence            99999999999998865 679999999999999999999999999999999999999999999999999997654432 2


Q ss_pred             cccccccCCCCCchhhhccCC---CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC--CCCHhH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRG---YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF--WFSTGA  237 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~--~~s~~~  237 (379)
                      ...+.+||+.|+|||++.+.+   +++.++|||||||++|+|++|++||.+.+....+.+|....  +.+|.  .+|+++
T Consensus       225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~  304 (410)
T 3v8s_A          225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA  304 (410)
T ss_dssp             ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHH
T ss_pred             cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHH
Confidence            345779999999999997654   24589999999999999999999999999888888886542  44454  689999


Q ss_pred             HHHHHHccCCCCCC--CCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKT--RIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~--R~s~~~il~hp~f~~~  267 (379)
                      ++||.+||..+|.+  |++++||++||||+..
T Consensus       305 ~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~  336 (410)
T 3v8s_A          305 KNLICAFLTDREVRLGRNGVEEIKRHLFFKND  336 (410)
T ss_dssp             HHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred             HHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence            99999999999998  9999999999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=5.3e-54  Score=413.27  Aligned_cols=259  Identities=40%  Similarity=0.724  Sum_probs=217.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++++.||+|+||+||+|++..+|+.||||++.......    +.+.+|+.+++.++||||+++++++.+.+..|
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   92 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID----ENVQREIINHRSLRHPNIVRFKEVILTPTHLA   92 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC----HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc----HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence            45689999999999999999999999999999999997654332    56789999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC--eEEeeeccccCCCCCc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN--LKVSDFGLSALPQQGV  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~--lkl~DfGl~~~~~~~~  163 (379)
                      +||||++||+|.+++...+++++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||++...... 
T Consensus        93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-  171 (361)
T 3uc3_A           93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-  171 (361)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence            99999999999999998899999999999999999999999999999999999999987765  999999998743322 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHHhcccCCCC--CCCHhH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYKKINAAEFSCPF--WFSTGA  237 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~~i~~~~~~~p~--~~s~~~  237 (379)
                      ......+||+.|+|||++.+..+++.++|||||||++|+|++|+.||.+.+.    ....+.+....+.+|.  .+|+++
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  251 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC  251 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHH
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHH
Confidence            2334567999999999998888876669999999999999999999977543    3455556666666665  479999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      .+||.+||+.||.+|||++++++||||.....
T Consensus       252 ~~li~~~L~~dP~~Rps~~ell~hp~f~~~~~  283 (361)
T 3uc3_A          252 CHLISRIFVADPATRISIPEIKTHSWFLKNLP  283 (361)
T ss_dssp             HHHHHHHSCSCTTTSCCHHHHHTSHHHHTTCC
T ss_pred             HHHHHHHccCChhHCcCHHHHHhCcchhcCCc
Confidence            99999999999999999999999999976543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.9e-54  Score=405.98  Aligned_cols=261  Identities=34%  Similarity=0.599  Sum_probs=231.8

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      +....++|++++.||+|+||.||+|.+..+|+.||+|++.+......   ...+.+.+|+.+++.++||||+++++++.+
T Consensus         6 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   85 (326)
T 2y0a_A            6 QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN   85 (326)
T ss_dssp             CSCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             cCCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence            34556789999999999999999999999999999999976543221   124678999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC----CeEEeeeccc
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG----NLKVSDFGLS  156 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~----~lkl~DfGl~  156 (379)
                      ....|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||+|||++
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a  165 (326)
T 2y0a_A           86 KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  165 (326)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence            999999999999999999998888999999999999999999999999999999999999999887    8999999999


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FW  232 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~  232 (379)
                      ...... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+.++    ..
T Consensus       166 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (326)
T 2y0a_A          166 HKIDFG-NEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN  243 (326)
T ss_dssp             EECCTT-SCCCCCCSCTTTCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTT
T ss_pred             eECCCC-CccccccCCcCcCCceeecCCCC-CcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCcccccc
Confidence            765443 23446689999999999977665 5899999999999999999999999888887777777666554    45


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +|+.+.+||.+||+.||.+|||++++++||||+.
T Consensus       244 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence            7999999999999999999999999999999974

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.9e-54  Score=407.71  Aligned_cols=255  Identities=27%  Similarity=0.507  Sum_probs=229.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++....    .....+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus         3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   78 (321)
T 1tki_A            3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVM   78 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence            4689999999999999999999999999999999986432    234668899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc--CCCeEEeeeccccCCCCCc
Q 016991           87 ILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~--~~~lkl~DfGl~~~~~~~~  163 (379)
                      ||||++|++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++...... 
T Consensus        79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~-  157 (321)
T 1tki_A           79 IFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-  157 (321)
T ss_dssp             EECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred             EEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence            999999999999997654 7999999999999999999999999999999999999987  789999999999766543 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGATS  239 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~  239 (379)
                      ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+.++.    .+|+++.+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  236 (321)
T 1tki_A          158 DNFRLLFTAPEYYAPEVHQHDVV-STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD  236 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEE-CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHH
T ss_pred             CccccccCChhhcCcHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHH
Confidence            33456789999999999977654 58999999999999999999999999888888888887776653    68999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||.+||..||.+|||+.|+++||||+..
T Consensus       237 li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          237 FVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            9999999999999999999999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=2.1e-54  Score=425.56  Aligned_cols=261  Identities=28%  Similarity=0.523  Sum_probs=229.0

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            34579999999999999999999999999999999997654333333345889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-c
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-V  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-~  163 (379)
                      +||||++||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++...... .
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~  230 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  230 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCC
Confidence            99999999999999987 578999999999999999999999999999999999999999999999999999655442 2


Q ss_pred             ccccccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCCC---CC
Q 016991          164 ELLHTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW---FS  234 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~---~s  234 (379)
                      ......+||+.|+|||++..    .+.++.++|||||||++|+|++|++||.+.+....+.+|...  .+.+|..   +|
T Consensus       231 ~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s  310 (437)
T 4aw2_A          231 VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVS  310 (437)
T ss_dssp             EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSC
T ss_pred             cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCC
Confidence            23345789999999999972    333468999999999999999999999999988888887543  3555554   89


Q ss_pred             HhHHHHHHHccCCCCCC--CCChHhHhcCccccc
Q 016991          235 TGATSLIHKILDPNPKT--RIRIEGIRKHPWFRK  266 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~--R~s~~~il~hp~f~~  266 (379)
                      +++.+||++||..+|++  |++++|+++||||+.
T Consensus       311 ~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~  344 (437)
T 4aw2_A          311 ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSG  344 (437)
T ss_dssp             HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHhCCCccCC
Confidence            99999999999998888  999999999999975

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=5.9e-54  Score=396.40  Aligned_cols=265  Identities=45%  Similarity=0.857  Sum_probs=231.8

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      .+....++|++++.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.++||||+++++++...+
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   84 (276)
T 2h6d_A            5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT   84 (276)
T ss_dssp             --CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             cCcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            45678899999999999999999999999999999999997654433344568899999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ..|+||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred             eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence            99999999999999999998889999999999999999999999999999999999999999999999999998765443


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH  242 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~  242 (379)
                       ......+|++.|+|||++.+..+.+.++||||||+++|+|++|..||...+.....+.+.......|..+++++.++|.
T Consensus       165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  243 (276)
T 2h6d_A          165 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLM  243 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred             -cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHH
Confidence             2334567999999999998777666899999999999999999999999888888888888888889999999999999


Q ss_pred             HccCCCCCCCCChHhHhcCccccccC
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      +||+.||.+|||++++++||||+...
T Consensus       244 ~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          244 HMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHccCChhhCCCHHHHHhChhhccCc
Confidence            99999999999999999999998654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=3e-54  Score=408.82  Aligned_cols=260  Identities=38%  Similarity=0.668  Sum_probs=224.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++++.||+|+||+||+|.+..+++.||||++.......  ..+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l   82 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            5789999999999999999999999999999999997644322  33668899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--cc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--~~  164 (379)
                      ||||++|++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  ..
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~  162 (323)
T 3tki_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (323)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence            9999999999999988888999999999999999999999999999999999999999999999999999754322  23


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccCCC--CCCCHhHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSCP--FWFSTGATSLI  241 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~p--~~~s~~~~~li  241 (379)
                      .....+||+.|+|||++.+..+.+.++|||||||++|+|++|..||...+.. ..+..+.......+  ..+++++.+||
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (323)
T 3tki_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  242 (323)
T ss_dssp             CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHH
Confidence            3456789999999999988777678999999999999999999999876543 33334433333333  45899999999


Q ss_pred             HHccCCCCCCCCChHhHhcCccccccC
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||+.||.+|||++|+++||||+...
T Consensus       243 ~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          243 HKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHHccCChhhCcCHHHHhhChhhcccc
Confidence            999999999999999999999998654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=8.1e-54  Score=397.55  Aligned_cols=265  Identities=34%  Similarity=0.679  Sum_probs=238.2

Q ss_pred             CCccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         1 m~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      |.+....+++|++.+.||+|+||.||+|.+..++..||||++...........+.+.+|+.+++.++||||+++++++.+
T Consensus         6 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   85 (284)
T 2vgo_A            6 MPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD   85 (284)
T ss_dssp             ----CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             CCccchhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc
Confidence            45667889999999999999999999999999999999999976544333345678999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      .+..|+||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           86 RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999986544


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHH
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL  240 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  240 (379)
                      ..  .....+|++.|+|||++.+..+ +.++||||||+++|+|++|..||...+.......+......+|..+++++.++
T Consensus       166 ~~--~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  242 (284)
T 2vgo_A          166 SL--RRRTMCGTLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDL  242 (284)
T ss_dssp             SS--CBCCCCSCGGGCCHHHHTTCCB-CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHH
T ss_pred             cc--ccccccCCCCcCCHHHhccCCC-CcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCCcCCHHHHHH
Confidence            32  2345679999999999987665 58999999999999999999999998888888888888888999999999999


Q ss_pred             HHHccCCCCCCCCChHhHhcCccccccC
Q 016991          241 IHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |.+||+.||.+|||++++++||||+...
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             HHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence            9999999999999999999999998654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3e-54  Score=403.34  Aligned_cols=260  Identities=35%  Similarity=0.633  Sum_probs=223.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc-----------------------hHHHHHHHHHHH
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-----------------------HRMVDQIKREIS   61 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~-----------------------~~~~~~~~~Ei~   61 (379)
                      ...+++|++.+.||+|+||.||+|.+..+|+.||||++.+.....                       ....+.+.+|+.
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~   88 (298)
T 2zv2_A            9 CVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIA   88 (298)
T ss_dssp             -CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHH
T ss_pred             ceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHH
Confidence            456899999999999999999999999999999999997654321                       112356889999


Q ss_pred             HHHhCCCCCcceEEEEEEe--CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCc
Q 016991           62 IMKIVRHPNIVRLHEVLAS--RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPEN  139 (379)
Q Consensus        62 ~l~~l~hp~Iv~l~~~~~~--~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~N  139 (379)
                      +++.++||||+++++++..  .+.+|+||||+++++|.+++ ..+.+++..++.++.||+.||.|||++||+||||||+|
T Consensus        89 ~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N  167 (298)
T 2zv2_A           89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN  167 (298)
T ss_dssp             HHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG
T ss_pred             HHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence            9999999999999999986  67899999999999998754 34689999999999999999999999999999999999


Q ss_pred             EEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 016991          140 LLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY--DGSAADVWSCGVILFVLMAGYLPFGETDLPT  217 (379)
Q Consensus       140 Ill~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~  217 (379)
                      ||++.++.+||+|||++.............+||+.|+|||++.+...  .+.++|||||||++|+|++|..||.+.+...
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~  247 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC  247 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence            99999999999999999876554444566789999999999976542  3578999999999999999999999888877


Q ss_pred             HHHHHHhcccCCC--CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          218 LYKKINAAEFSCP--FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       218 ~~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      ....+.......|  ..+++++.+||.+||+.||.+|||+.|+++||||+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          248 LHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            7777777665554  46899999999999999999999999999999996

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4.9e-54  Score=444.46  Aligned_cols=260  Identities=29%  Similarity=0.565  Sum_probs=239.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~   84 (379)
                      ..+++|++++.||+|+||+||+|++..+++.||||++.+.........+.+..|..++..+ +||+|+++++++.+.+.+
T Consensus       338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~  417 (674)
T 3pfq_A          338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL  417 (674)
T ss_dssp             --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred             ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence            4678999999999999999999999999999999999876544444557788999999987 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||++||+|.+++...+.+++..++.|+.||+.||+|||++||+||||||+|||++.+|++||+|||++........
T Consensus       418 ~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  497 (674)
T 3pfq_A          418 YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV  497 (674)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC
T ss_pred             EEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc
Confidence            99999999999999999989999999999999999999999999999999999999999999999999999986544444


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      ...+.+||+.|+|||++.+..| +.++|||||||++|+|++|++||.+.+...+++.|....+.+|..+|+++.+||++|
T Consensus       498 ~~~~~~GT~~Y~APE~l~~~~~-~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~l  576 (674)
T 3pfq_A          498 TTKTFCGTPDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGL  576 (674)
T ss_dssp             CBCCCCSCSSSCCHHHHTCCCB-STHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTTSCHHHHHHHHHH
T ss_pred             ccccccCCCcccCHhhhcCCCC-CccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHH
Confidence            5667899999999999987776 599999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCh-----HhHhcCccccc
Q 016991          245 LDPNPKTRIRI-----EGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~s~-----~~il~hp~f~~  266 (379)
                      |+.||.+||++     ++|++||||+.
T Consensus       577 L~~dP~~R~~~~~~~~~ei~~h~ff~~  603 (674)
T 3pfq_A          577 MTKHPGKRLGCGPEGERDIKEHAFFRY  603 (674)
T ss_dssp             SCSSSTTCTTCSTTHHHHHHSSGGGSS
T ss_pred             ccCCHHHCCCCCCCcHHHHhcCccccC
Confidence            99999999998     99999999975

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.2e-53  Score=403.32  Aligned_cols=261  Identities=31%  Similarity=0.471  Sum_probs=209.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++......  ...+.+.+|+.+++.++||||+++++++...+..|+
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   80 (317)
T 2pmi_A            3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE--GTPSTAIREISLMKELKHENIVRLYDVIHTENKLTL   80 (317)
T ss_dssp             ----------------CEEEEEECSSSCCEEEEEEEECCSTT--CSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEE
T ss_pred             cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc--ccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEE
Confidence            467899999999999999999999999999999999765422  223568899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           87 ILEFVTGGELFDKIVHQ------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      ||||++ ++|.+++...      ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus        81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            999997 5999988754      358999999999999999999999999999999999999999999999999997665


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--------------  226 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--------------  226 (379)
                      .........+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+....              
T Consensus       160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence            444445567899999999999775555699999999999999999999999888766655543210              


Q ss_pred             --------------------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          227 --------------------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       227 --------------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                                          ...+..+++++.+||.+||+.||.+|||++|+++||||+..+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  303 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHH  303 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC-
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccch
Confidence                                01123478899999999999999999999999999999876644

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-54  Score=420.07  Aligned_cols=260  Identities=29%  Similarity=0.517  Sum_probs=227.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.++..++||||+++++++.+.+.+|
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence            45689999999999999999999999999999999998754433334456889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +||||++||+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++........
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~  217 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGT  217 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSC
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCc
Confidence            9999999999999998754 799999999999999999999999999999999999999999999999999976544322


Q ss_pred             -cccccccCCCCCchhhhcc------CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCC---CC
Q 016991          165 -LLHTTCGTPNYVAPEVLSN------RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCP---FW  232 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~------~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p---~~  232 (379)
                       .....+||+.|+|||++..      ...++.++|||||||++|+|++|+.||.+.+....+.+|...  ...+|   ..
T Consensus       218 ~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~  297 (412)
T 2vd5_A          218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEG  297 (412)
T ss_dssp             EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----C
T ss_pred             cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccC
Confidence             2345689999999999973      223468999999999999999999999999888888877653  23444   57


Q ss_pred             CCHhHHHHHHHccCCCCCCC---CChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTR---IRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R---~s~~~il~hp~f~~  266 (379)
                      +|+++++||++||. +|.+|   ++++++++||||+.
T Consensus       298 ~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          298 VPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             CCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             CCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence            99999999999999 99998   59999999999975

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=5.2e-53  Score=394.03  Aligned_cols=264  Identities=34%  Similarity=0.559  Sum_probs=241.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            45679999999999999999999999999999999998766555566678999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  171 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER  171 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence            99999999999999988889999999999999999999999999999999999999999999999999998766543344


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHcc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  245 (379)
                      ....+||+.|+|||++.+..+ +.++||||+|+++|+|++|..||...+.......+.......|..+++.+.++|.+||
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  250 (294)
T 2rku_A          172 KKVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML  250 (294)
T ss_dssp             BCCCCSCCSSCCHHHHTTSCB-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccccCCCCcCCcchhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCccccCHHHHHHHHHHc
Confidence            456789999999999977665 5899999999999999999999999888888888888888889999999999999999


Q ss_pred             CCCCCCCCChHhHhcCccccccCCC
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      +.||.+|||++++++||||...+.+
T Consensus       251 ~~~p~~Rps~~~ll~~~~~~~~~~~  275 (294)
T 2rku_A          251 QTDPTARPTINELLNDEFFTSGYIP  275 (294)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHTSCCC
T ss_pred             ccChhhCcCHHHHhhChheecCCcC
Confidence            9999999999999999999876544

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.5e-53  Score=401.81  Aligned_cols=260  Identities=31%  Similarity=0.453  Sum_probs=217.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++++.||+|+||+||+|.+. +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   94 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL   94 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence            456789999999999999999999995 589999999975432 233456788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        95 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A           95 TLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             EEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             EEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            999999975 787777654 469999999999999999999999999999999999999999999999999998765544


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc----------------
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF----------------  227 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~----------------  227 (379)
                      ......+||+.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+.....                
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  253 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW  253 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence            4556678999999999997765557999999999999999999999987766554444422100                


Q ss_pred             --------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          228 --------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       228 --------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                    .....+++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  307 (311)
T 3niz_A          254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL  307 (311)
T ss_dssp             HSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTS
T ss_pred             hhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccC
Confidence                          0122368899999999999999999999999999999753

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=9.5e-54  Score=409.91  Aligned_cols=259  Identities=34%  Similarity=0.625  Sum_probs=224.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH--RMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~--~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ...++|++.+.||+|+||+||+|.+..+|+.||||++........  ...+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM  100 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            344689999999999999999999999999999999976432211  124678999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC---eEEeeeccc
Q 016991           84 VYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLS  156 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~---lkl~DfGl~  156 (379)
                      +|+||||++|++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            99999999999998888643    25899999999999999999999999999999999999987665   999999999


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FW  232 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~  232 (379)
                      .............+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+ ......+....+..+    ..
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~  258 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPY-GKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSH  258 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTT
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCC-CchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCcccccc
Confidence            776554444556789999999999987766 599999999999999999999998754 455666666665544    45


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +|+++.+||.+||+.||.+|||+.++++||||+.
T Consensus       259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            8999999999999999999999999999999975

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.2e-53  Score=429.45  Aligned_cols=262  Identities=28%  Similarity=0.459  Sum_probs=235.3

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .....++|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+.
T Consensus       180 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~  259 (543)
T 3c4z_A          180 QPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTD  259 (543)
T ss_dssp             SCCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCE
Confidence            45667899999999999999999999999999999999987655444445778899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           84 VYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      +|+||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++...
T Consensus       260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence            99999999999999999764    36999999999999999999999999999999999999999999999999999866


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhcccCCCCCCCH
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET----DLPTLYKKINAAEFSCPFWFST  235 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~----~~~~~~~~i~~~~~~~p~~~s~  235 (379)
                      ..........+||+.|+|||++.+..| +.++|||||||++|+|++|++||.+.    +...+.+.+......+|..+|+
T Consensus       340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~s~  418 (543)
T 3c4z_A          340 KAGQTKTKGYAGTPGFMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSP  418 (543)
T ss_dssp             CTTCCCBCCCCSCTTTSCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTSCH
T ss_pred             cCCCcccccccCCccccChhhhcCCCC-ChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCcccCH
Confidence            554344456699999999999988766 49999999999999999999999775    3456777888888889999999


Q ss_pred             hHHHHHHHccCCCCCCCCC-----hHhHhcCccccc
Q 016991          236 GATSLIHKILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ++.+||.+||+.||.+||+     +++|++||||+.
T Consensus       419 ~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~  454 (543)
T 3c4z_A          419 ASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD  454 (543)
T ss_dssp             HHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTT
T ss_pred             HHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccC
Confidence            9999999999999999996     489999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=6.7e-53  Score=401.23  Aligned_cols=264  Identities=34%  Similarity=0.554  Sum_probs=242.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            45789999999999999999999999999999999987665555667789999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||||+++++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..........
T Consensus       119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  198 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK  198 (335)
T ss_dssp             EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred             EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc
Confidence            99999999999999888899999999999999999999999999999999999999999999999999997665443444


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccC
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  246 (379)
                      ...+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+....+..|..+++++.+||.+||+
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  277 (335)
T 2owb_A          199 KVLCGTPNYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQ  277 (335)
T ss_dssp             CCCCSCCSSCCHHHHHTSCB-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHTC
T ss_pred             cccCCCccccCHHHhccCCC-CchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcc
Confidence            56789999999999987665 58999999999999999999999998888888888888888999999999999999999


Q ss_pred             CCCCCCCChHhHhcCccccccCCCC
Q 016991          247 PNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                      .||.+|||++++++||||+..+.+.
T Consensus       278 ~dp~~Rps~~ell~~~~~~~~~~~~  302 (335)
T 2owb_A          278 TDPTARPTINELLNDEFFTSGYIPA  302 (335)
T ss_dssp             SSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             CChhHCcCHHHHhcCccccCCCccc
Confidence            9999999999999999998776543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=9.8e-54  Score=395.57  Aligned_cols=262  Identities=33%  Similarity=0.625  Sum_probs=209.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +..+++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.++||||+++++++.+.+..
T Consensus         7 g~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   86 (278)
T 3cok_A            7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYV   86 (278)
T ss_dssp             CSSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEE
T ss_pred             ccccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeE
Confidence            34678999999999999999999999999999999999765443434457789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  166 (278)
T 3cok_A           87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH  166 (278)
T ss_dssp             EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence            9999999999999999875 579999999999999999999999999999999999999999999999999987655433


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHK  243 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~  243 (379)
                      ......+||+.|+|||++.+..+ +.++||||||+++|+|++|..||...+.......+....+..|..+++++.+||.+
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  245 (278)
T 3cok_A          167 EKHYTLCGTPNYISPEIATRSAH-GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQ  245 (278)
T ss_dssp             --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCCTTSCHHHHHHHHH
T ss_pred             CcceeccCCCCcCCcchhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCccccCHHHHHHHHH
Confidence            33446689999999999977655 58999999999999999999999887776666666666777888899999999999


Q ss_pred             ccCCCCCCCCChHhHhcCcccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||+.||.+|||++++++||||...
T Consensus       246 ~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          246 LLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             HSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             HcccCHhhCCCHHHHhcCccccCC
Confidence            999999999999999999999754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.3e-53  Score=430.84  Aligned_cols=261  Identities=29%  Similarity=0.475  Sum_probs=233.8

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .....++|++.+.||+|+||.||+|++..+|+.||||++.+...........+.+|+.+|+.++||||+++++++.+.+.
T Consensus       179 ~~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~  258 (576)
T 2acx_A          179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDA  258 (576)
T ss_dssp             SCCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCE
Confidence            34567899999999999999999999999999999999987654444445678899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +|+||||++||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++.....
T Consensus       259 l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          259 LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence            999999999999999998754  499999999999999999999999999999999999999999999999999976544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhcccCCCCCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~~p~~~s~~~  237 (379)
                      . ......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+    ...+.+.+......+|..+|+++
T Consensus       339 ~-~~~~~~~GT~~Y~APEvl~~~~~-~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~s~~~  416 (576)
T 2acx_A          339 G-QTIKGRVGTVGYMAPEVVKNERY-TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQA  416 (576)
T ss_dssp             T-CCEECCCSCGGGCCHHHHTTCEE-SSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTSCHHH
T ss_pred             C-ccccccCCCccccCHHHHcCCCC-CccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccCCHHH
Confidence            3 23456689999999999987666 499999999999999999999998753    35667777777788889999999


Q ss_pred             HHHHHHccCCCCCCCC-----ChHhHhcCccccc
Q 016991          238 TSLIHKILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      .+||.+||+.||.+||     +++|+++||||+.
T Consensus       417 ~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~  450 (576)
T 2acx_A          417 RSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK  450 (576)
T ss_dssp             HHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTT
T ss_pred             HHHHHHhccCCHHHcCCCCCCCHHHHHhChhhcc
Confidence            9999999999999999     7899999999985

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.1e-53  Score=395.90  Aligned_cols=256  Identities=30%  Similarity=0.451  Sum_probs=214.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||+||+|.+ .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV   78 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEE
Confidence            47899999999999999999999 67999999999754322 22336688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||+++ +|.+.+... +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++..........
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  157 (288)
T 1ob3_A           79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY  157 (288)
T ss_dssp             EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence            999975 888888764 679999999999999999999999999999999999999999999999999987654433344


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--c-----------------
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--F-----------------  227 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~-----------------  227 (379)
                      ...+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+....  .                 
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T 1ob3_A          158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN  237 (288)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred             ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccc
Confidence            566899999999999776555799999999999999999999998887665554443210  0                 


Q ss_pred             ----------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          228 ----------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       228 ----------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                ..+..+++++.+||.+||+.||++|||++|+++||||+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  286 (288)
T 1ob3_A          238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (288)
T ss_dssp             CCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             cccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhh
Confidence                      012347899999999999999999999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=8e-54  Score=409.11  Aligned_cols=254  Identities=34%  Similarity=0.617  Sum_probs=223.8

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ....++|++++.||+|+||+||+|.++.+|+.||||++.+....       ..+|+.++..+ +||||+++++++.+.+.
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~   90 (342)
T 2qr7_A           18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKY   90 (342)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred             cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence            34567899999999999999999999999999999999765422       34678888777 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-C---CeEEeeeccccCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-G---NLKVSDFGLSALP  159 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~---~lkl~DfGl~~~~  159 (379)
                      .|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+..+ +   .+||+|||++...
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            99999999999999999988899999999999999999999999999999999999998543 3   4999999999876


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHhcccCCC----CC
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE---TDLPTLYKKINAAEFSCP----FW  232 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~---~~~~~~~~~i~~~~~~~p----~~  232 (379)
                      ........+.+||+.|+|||++.+..+. .++|||||||++|+|++|..||.+   .+...+...+....+..+    ..
T Consensus       171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  249 (342)
T 2qr7_A          171 RAENGLLMTPCYTANFVAPEVLERQGYD-AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNS  249 (342)
T ss_dssp             BCTTCCBCCSSCCSSCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTT
T ss_pred             cCCCCceeccCCCccccCHHHhcCCCCC-CccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccccc
Confidence            5544556678999999999999876664 899999999999999999999976   345677778877776654    45


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +|+++.+||.+||..||.+|||+.++++||||..
T Consensus       250 ~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          250 VSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            8999999999999999999999999999999965

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.4e-53  Score=410.45  Aligned_cols=261  Identities=30%  Similarity=0.417  Sum_probs=211.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC-
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRT-   82 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~-   82 (379)
                      ....++|++++.||+|+||.||+|.+..+|+.||||++.+. .........+.+|+.+++.+. ||||+++++++...+ 
T Consensus         5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~   83 (388)
T 3oz6_A            5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND   83 (388)
T ss_dssp             HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred             CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence            45678999999999999999999999999999999998654 233445677889999999997 999999999997544 


Q ss_pred             -eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 -KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 -~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                       .+|+||||++ ++|.+.+.. +.+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus        84 ~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  161 (388)
T 3oz6_A           84 RDVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVN  161 (388)
T ss_dssp             SCEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred             CEEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence             7999999996 588888866 6899999999999999999999999999999999999999999999999999875422


Q ss_pred             ---------------------CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 016991          162 ---------------------GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK  220 (379)
Q Consensus       162 ---------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~  220 (379)
                                           ........+||+.|+|||++.+...++.++||||+||++|+|++|++||.+.+......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~  241 (388)
T 3oz6_A          162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLE  241 (388)
T ss_dssp             CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                                 11224456899999999999875555799999999999999999999999888766655


Q ss_pred             HHHhcc-c----------------------------------------------CCCCCCCHhHHHHHHHccCCCCCCCC
Q 016991          221 KINAAE-F----------------------------------------------SCPFWFSTGATSLIHKILDPNPKTRI  253 (379)
Q Consensus       221 ~i~~~~-~----------------------------------------------~~p~~~s~~~~~li~~~L~~dP~~R~  253 (379)
                      .+.... .                                              ..+..+++++.+||.+||+.||.+||
T Consensus       242 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~  321 (388)
T 3oz6_A          242 RIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRI  321 (388)
T ss_dssp             HHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCC
Confidence            543210 0                                              11225789999999999999999999


Q ss_pred             ChHhHhcCccccccC
Q 016991          254 RIEGIRKHPWFRKNY  268 (379)
Q Consensus       254 s~~~il~hp~f~~~~  268 (379)
                      |++|+++||||+...
T Consensus       322 t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          322 SANDALKHPFVSIFH  336 (388)
T ss_dssp             CHHHHTTSTTTTTTC
T ss_pred             CHHHHhCCHHHHHhc
Confidence            999999999997654

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.1e-52  Score=394.85  Aligned_cols=259  Identities=28%  Similarity=0.431  Sum_probs=217.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+..++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence            689999999999999999999999999999999986643 2334456788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      |||+++++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++...........
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD  160 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC
Confidence            99999999999888888899999999999999999999999999999999999999999999999999987655444456


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------------c
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------------------E  226 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------------------~  226 (379)
                      ..+||+.|+|||++.+....+.++||||+||++|+|++|.+||.+.+.......+...                     .
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK  240 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence            6789999999999987555579999999999999999999999887765544333211                     0


Q ss_pred             cCCC----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 FSCP----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ~~~p----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ...|          ..+++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  291 (311)
T 4agu_A          241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI  291 (311)
T ss_dssp             CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhc
Confidence            0111          2478899999999999999999999999999999853

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=9.7e-54  Score=401.60  Aligned_cols=246  Identities=21%  Similarity=0.310  Sum_probs=193.6

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----eE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----KV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----~~   84 (379)
                      .+|.+.+.||+|+||+||+|++  +|+.||||+++....    .......|+..+..++|||||++++++...+    .+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~   76 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL   76 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence            4689999999999999999987  589999999865421    1123345677778899999999999997643    68


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK--------GVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~--------gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      |+|||||+||+|.+++.. .++++..+.+++.|++.||.|||++        ||+||||||+||||+.++++||+|||++
T Consensus        77 ~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           77 WLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence            999999999999999976 6799999999999999999999987        9999999999999999999999999999


Q ss_pred             cCCCCCcc----cccccccCCCCCchhhhccCCC-----CCCchhHHHHHHHHHHHHhCCCCCCCC--------------
Q 016991          157 ALPQQGVE----LLHTTCGTPNYVAPEVLSNRGY-----DGSAADVWSCGVILFVLMAGYLPFGET--------------  213 (379)
Q Consensus       157 ~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiwSlGvil~~ll~g~~Pf~~~--------------  213 (379)
                      +.......    ...+.+||+.|+|||++.+...     ++.++|||||||+||||++|.+||...              
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~  235 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence            76544222    2235689999999999975421     246899999999999999998776422              


Q ss_pred             -ChHHHHHHHHhcc--cCCCCC-----CCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          214 -DLPTLYKKINAAE--FSCPFW-----FSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       214 -~~~~~~~~i~~~~--~~~p~~-----~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                       ....+.+.+....  ..+|..     .+..+.+|+.+||+.||++|||+.++++.
T Consensus       236 ~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             chHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence             1223333333332  233332     23467899999999999999999998863

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=4.4e-53  Score=401.09  Aligned_cols=256  Identities=35%  Similarity=0.693  Sum_probs=206.5

Q ss_pred             eeccCeeee---eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC
Q 016991            6 RRVAKYEVG---RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASR   81 (379)
Q Consensus         6 ~~~~~y~~~---~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~   81 (379)
                      ....+|++.   +.||+|+||.||+|.+..+|+.||||++.+.      ....+.+|+.+++.+. ||||+++++++.+.
T Consensus         5 ~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~   78 (325)
T 3kn6_A            5 PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQ   78 (325)
T ss_dssp             HHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             cchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC
Confidence            345778886   7899999999999999999999999998653      2356778999999997 99999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSAL  158 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~  158 (379)
                      ...|+||||++||+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++..
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~  158 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL  158 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred             CEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence            99999999999999999999989999999999999999999999999999999999999998766   799999999987


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-------hHHHHHHHHhcccCCCC
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-------LPTLYKKINAAEFSCPF  231 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-------~~~~~~~i~~~~~~~p~  231 (379)
                      ...........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+       .......+....+.++.
T Consensus       159 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~  237 (325)
T 3kn6_A          159 KPPDNQPLKTPCFTLHYAAPELLNQNGY-DESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG  237 (325)
T ss_dssp             CCC----------------------CCC-CHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS
T ss_pred             cCCCCCcccccCCCcCccCHHHhcCCCC-CCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc
Confidence            6655555667889999999999987776 489999999999999999999997643       34666777777766553


Q ss_pred             ----CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          232 ----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       232 ----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                          .+|+++.+||.+||+.||.+|||++++++||||+...
T Consensus       238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~  278 (325)
T 3kn6_A          238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGS  278 (325)
T ss_dssp             HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTC
T ss_pred             ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCc
Confidence                4799999999999999999999999999999998653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.3e-52  Score=420.82  Aligned_cols=264  Identities=33%  Similarity=0.613  Sum_probs=231.8

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch----------HHHHHHHHHHHHHHhCCCCCcce
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH----------RMVDQIKREISIMKIVRHPNIVR   73 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~----------~~~~~~~~Ei~~l~~l~hp~Iv~   73 (379)
                      .....++|++++.||+|+||+||+|.+..++..||||++.+......          ...+.+.+|+.+++.++||||++
T Consensus        31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~  110 (504)
T 3q5i_A           31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK  110 (504)
T ss_dssp             CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred             CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence            34567899999999999999999999999999999999987543321          23467899999999999999999


Q ss_pred             EEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEE
Q 016991           74 LHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKV  150 (379)
Q Consensus        74 l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl  150 (379)
                      +++++.+...+|+|||||+||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||
T Consensus       111 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          111 LFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEE
Confidence            9999999999999999999999999999989999999999999999999999999999999999999999876   6999


Q ss_pred             eeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC
Q 016991          151 SDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP  230 (379)
Q Consensus       151 ~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p  230 (379)
                      +|||++...... ......+||+.|+|||++.+ .+ +.++||||+||++|+|++|.+||.+.+.......+....+.++
T Consensus       191 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  267 (504)
T 3q5i_A          191 VDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD  267 (504)
T ss_dssp             CCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC
T ss_pred             EECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CC-CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999999765543 33456789999999999864 34 5899999999999999999999999999899999888877665


Q ss_pred             ----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          231 ----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       231 ----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                          ..+|+++.+||++||++||.+|||++++++||||+.....
T Consensus       268 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~  311 (504)
T 3q5i_A          268 FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANN  311 (504)
T ss_dssp             HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCC
T ss_pred             ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhc
Confidence                4589999999999999999999999999999999876543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.9e-53  Score=402.75  Aligned_cols=262  Identities=26%  Similarity=0.407  Sum_probs=213.3

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ....+++|++++.||+|+||+||+|.+..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred             cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence            45678999999999999999999999999999999999976532 22334667899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc-----cCCCeEEeeeccccC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-----SYGNLKVSDFGLSAL  158 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~-----~~~~lkl~DfGl~~~  158 (379)
                      .|+||||++ |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||++..
T Consensus       108 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          108 LHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            999999997 59999999988999999999999999999999999999999999999995     445599999999876


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cC---------
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FS---------  228 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~---------  228 (379)
                      ...........+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+.... ..         
T Consensus       187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (329)
T 3gbz_A          187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT  266 (329)
T ss_dssp             HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence            55444445567899999999999876656799999999999999999999999887766555543211 00         


Q ss_pred             -CC-------------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          229 -CP-------------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       229 -~p-------------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                       .+                   ..+++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  325 (329)
T 3gbz_A          267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN  325 (329)
T ss_dssp             GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSS
T ss_pred             hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCC
Confidence             01                   1168999999999999999999999999999999853

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3e-52  Score=386.53  Aligned_cols=260  Identities=39%  Similarity=0.722  Sum_probs=232.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +..-++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   80 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH   80 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEE
Confidence            3456899999999999999999999999999999999976554 333457789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC---eEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~---lkl~DfGl~~~~~~  161 (379)
                      |+||||++|++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.   +||+|||++.....
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            999999999999999998899999999999999999999999999999999999999987665   99999999876544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                      . ......+||+.|+|||++.+..+ +.++||||+|+++|+|++|..||.+.+.......+.......|    ..+++++
T Consensus       161 ~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T 3kk8_A          161 S-EAWHGFAGTPGYLSPEVLKKDPY-SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA  238 (284)
T ss_dssp             S-CBCCCSCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred             C-ccccCCCCCcCCcCchhhcCCCC-CcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHH
Confidence            3 23345679999999999987666 5899999999999999999999999988888888877766554    3579999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||.+||++||.+|||++++++||||+..
T Consensus       239 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (284)
T 3kk8_A          239 KSLIDSMLTVNPKKRITADQALKVPWICNR  268 (284)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTSHHHHSC
T ss_pred             HHHHHHHcccChhhCCCHHHHhcCccccCC
Confidence            999999999999999999999999999754

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=6.4e-53  Score=418.65  Aligned_cols=258  Identities=28%  Similarity=0.450  Sum_probs=213.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR----   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~----   81 (379)
                      ...++|++++.||+|+||+||+|.+..+|+.||||++.+.. ......+.+.+|+.+|+.++||||+++++++...    
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~  137 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE  137 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence            34689999999999999999999999999999999997653 3444567889999999999999999999999654    


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                        ..+|+||||+++ .|.+.+.  ..+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||++...
T Consensus       138 ~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          138 EFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  214 (464)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred             cCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence              467999999976 4666664  45999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-------------  226 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------  226 (379)
                      ... ......+||+.|+|||++.+..|. .++|||||||++|+|++|++||.+.+.......+....             
T Consensus       215 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~  292 (464)
T 3ttj_A          215 GTS-FMMTPYVVTRYYRAPEVILGMGYK-ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  292 (464)
T ss_dssp             --C-CCC----CCCTTCCHHHHTTCCCC-TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCH
T ss_pred             CCC-cccCCCcccccccCHHHHcCCCCC-HHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcch
Confidence            442 334567899999999999887765 89999999999999999999999988766655543210             


Q ss_pred             --------------cC----CCCC-----------CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          227 --------------FS----CPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       227 --------------~~----~p~~-----------~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                    ..    +|..           .++++.+||.+||+.||.+|||++|+++||||+..+.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  364 (464)
T 3ttj_A          293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD  364 (464)
T ss_dssp             HHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             hhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhccC
Confidence                          00    0111           1567999999999999999999999999999987554

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2e-52  Score=405.81  Aligned_cols=262  Identities=21%  Similarity=0.335  Sum_probs=220.1

Q ss_pred             eeccCeeeeeeeccc--CCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            6 RRVAKYEVGRTIGEG--TFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G--~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ...++|++++.||+|  +||.||+|++..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  100 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE  100 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence            456899999999999  999999999999999999999987543 34456789999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +|+||||+++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence            99999999999999999876  6799999999999999999999999999999999999999999999999998754321


Q ss_pred             C-------cccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-------
Q 016991          162 G-------VELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-------  226 (379)
Q Consensus       162 ~-------~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-------  226 (379)
                      .       .......+||+.|+|||++.+. ...+.++|||||||++|+|++|+.||.+.+.......+....       
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  260 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT  260 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence            1       1122345799999999999763 234589999999999999999999998766544433322111       


Q ss_pred             ---------------------------------------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 ---------------------------------------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ---------------------------------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                                             ...+..+++++.+||.+||+.||++|||++|+++||||+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~  340 (389)
T 3gni_B          261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  340 (389)
T ss_dssp             ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred             cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence                                                   12344578999999999999999999999999999999864


Q ss_pred             C
Q 016991          268 Y  268 (379)
Q Consensus       268 ~  268 (379)
                      .
T Consensus       341 ~  341 (389)
T 3gni_B          341 K  341 (389)
T ss_dssp             -
T ss_pred             h
Confidence            3

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-52  Score=405.29  Aligned_cols=259  Identities=27%  Similarity=0.563  Sum_probs=228.8

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+..+|+.||+|++....   ......+.+|+.+|+.++||||+++++++.+....
T Consensus        47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  123 (387)
T 1kob_A           47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM  123 (387)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEE
T ss_pred             CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEE
Confidence            445689999999999999999999999999999999997643   22335788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc--CCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~--~~~lkl~DfGl~~~~~~  161 (379)
                      |+||||++||+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++.....
T Consensus       124 ~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~  203 (387)
T 1kob_A          124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  203 (387)
T ss_dssp             EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             EEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCC
Confidence            99999999999999987654 7999999999999999999999999999999999999974  46799999999976544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                      . ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+.++    ..+|+++
T Consensus       204 ~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  281 (387)
T 1kob_A          204 D-EIVKVTTATAEFAAPEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA  281 (387)
T ss_dssp             T-SCEEEECSSGGGCCHHHHTTCCB-CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred             C-cceeeeccCCCccCchhccCCCC-CCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHH
Confidence            3 23455689999999999987665 5899999999999999999999999888777777777665443    3579999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||.+||+.||.+|||+.++++||||+...
T Consensus       282 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          282 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            9999999999999999999999999998654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.9e-52  Score=385.54  Aligned_cols=258  Identities=40%  Similarity=0.674  Sum_probs=232.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +...++|++.+.||+|+||.||+|.+..++..||+|++......   ..+.+.+|+.+++.++||||+++++++...+..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (277)
T 3f3z_A            5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDI   81 (277)
T ss_dssp             -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeE
Confidence            45567899999999999999999999999999999999765432   246788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~~~~~~  161 (379)
                      |+||||++|++|.+++...+.+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           82 YLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             EEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            9999999999999999988999999999999999999999999999999999999999   7889999999999876543


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~  237 (379)
                      . ......+||+.|+|||++.+.  .+.++||||||+++|+|++|..||...+.......+.......|.    .+++++
T Consensus       162 ~-~~~~~~~~t~~y~aPE~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (277)
T 3f3z_A          162 G-KMMRTKVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQA  238 (277)
T ss_dssp             T-SCBCCCCSCTTTCCHHHHTTC--BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHH
T ss_pred             c-cchhccCCCCCccChHHhccc--CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHH
Confidence            3 334566899999999998653  468999999999999999999999998888888888888777765    589999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||.+||+.||.+|||+.++++||||+...
T Consensus       239 ~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~  269 (277)
T 3f3z_A          239 ESLIRRLLTKSPKQRITSLQALEHEWFEKQL  269 (277)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHHHhccc
Confidence            9999999999999999999999999998643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.6e-53  Score=422.65  Aligned_cols=261  Identities=34%  Similarity=0.611  Sum_probs=234.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  101 (484)
T 3nyv_A           22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF  101 (484)
T ss_dssp             CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            34567899999999999999999999999999999999876554444567899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~~~~~~  161 (379)
                      |+||||+.||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            9999999999999999998999999999999999999999999999999999999999   4678999999999876544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                      . ......+||+.|+|||++.+ .+ +.++|||||||++|+|++|.+||.+.+.......+....+.++    ..+|+++
T Consensus       182 ~-~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  258 (484)
T 3nyv_A          182 S-KKMKDKIGTAYYIAPEVLHG-TY-DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA  258 (484)
T ss_dssp             C-CSHHHHTTGGGTCCHHHHHT-CC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHH
T ss_pred             c-cccccCCCCccccCceeecC-CC-CCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHH
Confidence            3 23456789999999999975 44 5899999999999999999999999998888888888765543    3489999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||.+||+.||.+|||+.++++||||+...
T Consensus       259 ~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          259 KDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             HHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            9999999999999999999999999998654

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.5e-52  Score=393.73  Aligned_cols=260  Identities=33%  Similarity=0.587  Sum_probs=231.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++++.||+|+||.||+|.+..+|+.||||++........   ...+.+.+|+.+++.++||||+++++++.+.
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   87 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR   87 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            4456789999999999999999999999999999999976543221   1246789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC----CeEEeeecccc
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG----NLKVSDFGLSA  157 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~----~lkl~DfGl~~  157 (379)
                      +..|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++    .+||+|||++.
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            99999999999999999999888899999999999999999999999999999999999999888    79999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCC
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWF  233 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~  233 (379)
                      ..... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+..+    ..+
T Consensus       168 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (321)
T 2a2a_A          168 EIEDG-VEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT  245 (321)
T ss_dssp             ECCTT-CCCCCCCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTC
T ss_pred             ecCcc-ccccccCCCCCccCcccccCCCC-CCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhccc
Confidence            65443 22345679999999999977665 5899999999999999999999999888888888777666554    468


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++.+.+||.+||+.||.+|||++++++||||+.
T Consensus       246 ~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~  278 (321)
T 2a2a_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITP  278 (321)
T ss_dssp             CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCccccC
Confidence            999999999999999999999999999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.4e-52  Score=418.65  Aligned_cols=262  Identities=35%  Similarity=0.622  Sum_probs=231.0

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ++...++|++++.||+|+||+||+|.+..+|+.||||++.+...... ....+.+|+.+++.++||||+++++++.+...
T Consensus        17 ~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   95 (486)
T 3mwu_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELLKKLDHPNIMKLFEILEDSSS   95 (486)
T ss_dssp             CCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccch-HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE
Confidence            45567899999999999999999999999999999999976443222 34678999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc---cCCCeEEeeeccccCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD---SYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~---~~~~lkl~DfGl~~~~~  160 (379)
                      +|+||||++||+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            999999999999999999889999999999999999999999999999999999999995   45679999999997654


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHh
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTG  236 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~  236 (379)
                      .. ......+||+.|+|||++.+ .| +.++|||||||++|+|++|.+||.+.+.......+....+.++    ..+|++
T Consensus       176 ~~-~~~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  252 (486)
T 3mwu_A          176 QN-TKMKDRIGTAYYIAPEVLRG-TY-DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD  252 (486)
T ss_dssp             CC-----CCTTGGGGCCGGGGGS-CC-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHH
T ss_pred             CC-CccCCCcCCCCCCCHHHhCC-CC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHH
Confidence            43 33456789999999999975 34 5899999999999999999999999998888888887765543    247999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      +.+||.+||+.||.+|||+.++++||||+....
T Consensus       253 ~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  285 (486)
T 3mwu_A          253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS  285 (486)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc
Confidence            999999999999999999999999999987543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=5.8e-52  Score=385.78  Aligned_cols=258  Identities=32%  Similarity=0.574  Sum_probs=221.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ++...++|.+.+.||+|+||.||+|.+..+|..||+|++.......  ..+.+.+|+.+++.++||||+++++++.+...
T Consensus        17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   94 (285)
T 3is5_A           17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV--PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHN   94 (285)
T ss_dssp             SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred             CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch--hHHHHHHHHHHHHhCCCchHHhHHHheecCCe
Confidence            4456789999999999999999999999999999999997754322  34778999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccc
Q 016991           84 VYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLS  156 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~  156 (379)
                      .|+||||++|++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            99999999999999988543    679999999999999999999999999999999999999   45678999999999


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC---CCC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP---FWF  233 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p---~~~  233 (379)
                      ...... ......+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.+.+.......+.......+   ..+
T Consensus       175 ~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~-~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (285)
T 3is5_A          175 ELFKSD-EHSTNAAGTALYMAPEVFKR-DV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPL  251 (285)
T ss_dssp             CC-----------CTTGGGCCHHHHTT-CC-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCC
T ss_pred             eecCCc-ccCcCcccccCcCChHHhcc-CC-CcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcC
Confidence            765443 23456679999999999853 44 5899999999999999999999999888777777665554433   237


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++++.+||.+||+.||.+|||+.|+++||||+.
T Consensus       252 ~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          252 TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            899999999999999999999999999999974

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=7.3e-53  Score=399.19  Aligned_cols=259  Identities=26%  Similarity=0.413  Sum_probs=212.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||+||+|.+..+|+.||||++......  .....+.+|+.+++.++||||+++++++...+..|+|
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV   78 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence            47899999999999999999999999999999998654321  1112355799999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||++ |+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus        79 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  157 (324)
T 3mtl_A           79 FEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY  157 (324)
T ss_dssp             EECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred             ecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence            99996 58888887654 58999999999999999999999999999999999999999999999999987665544455


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------------
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------------  227 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------------  227 (379)
                      ...+||+.|+|||++.+....+.++||||+||++|+|++|..||.+.+.......+.....                   
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence            5678999999999998755567999999999999999999999998887666555433110                   


Q ss_pred             -----------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          228 -----------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       228 -----------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                 ..+..+++++.+||.+||+.||.+|||++|+++||||.....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence                       011246889999999999999999999999999999986543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=2e-52  Score=418.38  Aligned_cols=259  Identities=33%  Similarity=0.639  Sum_probs=225.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +...++|++++.||+|+||+||+|++..++..||||++.+...... ....+.+|+.+++.++||||+++++++.+....
T Consensus        33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  111 (494)
T 3lij_A           33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY  111 (494)
T ss_dssp             CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C-TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence            3455689999999999999999999999999999999987543222 246788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lkl~DfGl~~~~~~  161 (379)
                      |+|||||+||+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||++.....
T Consensus       112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~  191 (494)
T 3lij_A          112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN  191 (494)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence            9999999999999999988999999999999999999999999999999999999999764   4599999999876554


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~  237 (379)
                      . ......+||+.|+|||++.+ .+ +.++||||+||++|+|++|.+||.+.+.......+....+.++.    .+|+++
T Consensus       192 ~-~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  268 (494)
T 3lij_A          192 Q-KKMKERLGTAYYIAPEVLRK-KY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGA  268 (494)
T ss_dssp             T-BCBCCCCSCTTTCCHHHHTT-CB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHH
T ss_pred             C-ccccccCCCcCeeCHHHHcc-cC-CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHH
Confidence            3 33456789999999999863 44 58999999999999999999999999988888888887765542    479999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||.+||+.||.+|||+.++++||||+..
T Consensus       269 ~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          269 KDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             HHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence            999999999999999999999999999753

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=3e-52  Score=413.25  Aligned_cols=260  Identities=27%  Similarity=0.351  Sum_probs=201.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----C
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-----R   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-----~   81 (379)
                      ..++|++++.||+|+||+||+|.+..+|+.||||++.+. .......+.+.+|+.+|+.++||||+++++++..     .
T Consensus        51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~  129 (458)
T 3rp9_A           51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF  129 (458)
T ss_dssp             SCTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred             cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence            347899999999999999999999999999999999653 3344456789999999999999999999999843     3


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..+|+||||+ +++|.+++.....+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus       130 ~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          130 DELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             CCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             ceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            5799999998 679999998888899999999999999999999999999999999999999999999999999976542


Q ss_pred             Cc---------------------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh---------
Q 016991          162 GV---------------------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA---------  205 (379)
Q Consensus       162 ~~---------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~---------  205 (379)
                      ..                           ......+||+.|+|||++.....++.++||||||||+|+|++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence            11                           123456899999999987655555699999999999999998         


Q ss_pred             --CCCCCCCCCh--------------------HHHHHHHHhc----------------------c---------cCCCCC
Q 016991          206 --GYLPFGETDL--------------------PTLYKKINAA----------------------E---------FSCPFW  232 (379)
Q Consensus       206 --g~~Pf~~~~~--------------------~~~~~~i~~~----------------------~---------~~~p~~  232 (379)
                        |.+||.+.+.                    ......|...                      .         ....+.
T Consensus       289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (458)
T 3rp9_A          289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA  368 (458)
T ss_dssp             GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred             ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence              7788866541                    1111111000                      0         001134


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .++++.+||.+||..||.+|||++|+|+||||+...
T Consensus       369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          369 SSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             CCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence            689999999999999999999999999999998654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=7.3e-52  Score=389.00  Aligned_cols=260  Identities=27%  Similarity=0.380  Sum_probs=213.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc--hHHHHHHHHHHHHHHhCC---CCCcceEEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVR---HPNIVRLHEVLA   79 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~   79 (379)
                      ....++|++++.||+|+||+||+|++..+|+.||||++.......  ......+.+|+.+++.++   ||||+++++++.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             -----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             cccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            455689999999999999999999999999999999997543211  111245667777777664   999999999998


Q ss_pred             eCC-----eEEEEEeccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           80 SRT-----KVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        80 ~~~-----~~~lv~E~~~gg~L~~~l~~~~~--l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      ...     .+++||||+. ++|.+++.....  +++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~D  163 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD  163 (308)
T ss_dssp             ECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred             ccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEee
Confidence            755     5899999996 599999987654  99999999999999999999999999999999999999999999999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC----
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS----  228 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~----  228 (379)
                      ||++...... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.......+......    
T Consensus       164 fg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  241 (308)
T 3g33_A          164 FGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTY-ATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED  241 (308)
T ss_dssp             CSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCC-CSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             CccccccCCC-cccCCccccccccCchHHcCCCC-CchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            9999765443 33456789999999999988776 58999999999999999999999988877666655332100    


Q ss_pred             -----------------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          229 -----------------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       229 -----------------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                             ....+++++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~  303 (308)
T 3g33_A          242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD  303 (308)
T ss_dssp             TSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC---
T ss_pred             hccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCC
Confidence                                   112478899999999999999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=5.3e-52  Score=397.17  Aligned_cols=264  Identities=26%  Similarity=0.369  Sum_probs=221.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----   80 (379)
                      ...+++|++++.||+|+||.||+|++..+|+.||||++....... .....+.+|+.+++.++||||+++++++..    
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   91 (351)
T 3mi9_A           13 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKASP   91 (351)
T ss_dssp             SCBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC---
T ss_pred             cccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhccCCCcccHhheeeccccc
Confidence            356899999999999999999999999999999999986654322 233567799999999999999999999976    


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           81 ----RTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        81 ----~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                          .+.+|+||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        92 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~  170 (351)
T 3mi9_A           92 YNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL  170 (351)
T ss_dssp             -----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred             cccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchh
Confidence                4579999999975 777766553 6799999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCC----CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC
Q 016991          156 SALPQQ----GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF  231 (379)
Q Consensus       156 ~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~  231 (379)
                      +.....    ........+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+.......+.......+.
T Consensus       171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  250 (351)
T 3mi9_A          171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  250 (351)
T ss_dssp             CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence            875442    1223345679999999999977665579999999999999999999999998877666665443222211


Q ss_pred             C--------------------------------CCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          232 W--------------------------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       232 ~--------------------------------~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      .                                .++++.+||.+||+.||++|||++|+++||||+....+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred             hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence            1                                26789999999999999999999999999999865443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=7.6e-52  Score=396.44  Aligned_cols=256  Identities=36%  Similarity=0.645  Sum_probs=209.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++....     ..+.+.+|+.+++.++||||+++++++...+..|
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  124 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS  124 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence            34567999999999999999999999999999999987542     2356789999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CCCeEEeeeccccCCCCC
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~~lkl~DfGl~~~~~~~  162 (379)
                      +||||++|++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||++......
T Consensus       125 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~  204 (349)
T 2w4o_A          125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ  204 (349)
T ss_dssp             EEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence            99999999999999998888999999999999999999999999999999999999975   889999999998765432


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccCCC----CCCCHhH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... .....+....+..+    ..+++++
T Consensus       205 -~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  282 (349)
T 2w4o_A          205 -VLMKTVCGTPGYCAPEILRGCAY-GPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA  282 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred             -cccccccCCCCccCHHHhcCCCC-CcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHH
Confidence             23456789999999999987666 58999999999999999999999776544 36666666554433    3579999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||.+||+.||++|||+.++++||||+...
T Consensus       283 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999999999999997643

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=4.9e-52  Score=394.39  Aligned_cols=260  Identities=29%  Similarity=0.418  Sum_probs=219.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+..|
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  100 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWY  100 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEE
Confidence            46889999999999999999999999999999999986643 23334567889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus       101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  180 (331)
T 4aaa_A          101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV  180 (331)
T ss_dssp             EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc
Confidence            99999999999888877788999999999999999999999999999999999999999999999999999766554445


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------------------c
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------------------E  226 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------------------~  226 (379)
                      ....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...                   .
T Consensus       181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (331)
T 4aaa_A          181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG  260 (331)
T ss_dssp             ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred             cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccc
Confidence            566789999999999987655579999999999999999999999887765544333211                   0


Q ss_pred             cCC------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          227 FSC------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       227 ~~~------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ...            .+.+++++.+||.+||+.||.+|||++|+++||||+.
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             CCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             ccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence            111            1246899999999999999999999999999999974

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.6e-51  Score=389.61  Aligned_cols=253  Identities=26%  Similarity=0.458  Sum_probs=223.4

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      .|+..+.||+|+||.||+|.+..+|+.||||++......   ..+.+.+|+.+++.++||||+++++++...+..|+|||
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  122 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME  122 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC---SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence            488889999999999999999999999999999764322   34678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      |++|++|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.............
T Consensus       123 ~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~  201 (321)
T 2c30_A          123 FLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSL  201 (321)
T ss_dssp             CCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             cCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccc
Confidence            9999999998764 679999999999999999999999999999999999999999999999999987665543444567


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCHhHHHHHHHccC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~li~~~L~  246 (379)
                      +||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.....   ..+..+++++.+||.+||+
T Consensus       202 ~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  280 (321)
T 2c30_A          202 VGTPYWMAPEVISRSLY-ATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLV  280 (321)
T ss_dssp             CSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSC
T ss_pred             cCCccccCHhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHcc
Confidence            89999999999977665 5899999999999999999999998887776666655432   2334579999999999999


Q ss_pred             CCCCCCCChHhHhcCcccccc
Q 016991          247 PNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .||.+|||++++++||||...
T Consensus       281 ~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          281 RDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             SSTTTSCCHHHHHTSGGGGGC
T ss_pred             CChhhCcCHHHHhcChhhccC
Confidence            999999999999999999754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=9.3e-53  Score=400.56  Aligned_cols=255  Identities=31%  Similarity=0.524  Sum_probs=224.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch-----HHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH-----RMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++.+......     ...+.+.+|+.+++.++||||+++++++.+
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~  100 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFEN  100 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEee
Confidence            345789999999999999999999999999999999987543221     123456789999999999999999999999


Q ss_pred             CCeEEEEEeccCCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           81 RTKVYIILEFVTGG-ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        81 ~~~~~lv~E~~~gg-~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .+..|+||||+.+| +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       101 ~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          101 QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            99999999998766 99999998889999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHH
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS  239 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~  239 (379)
                      ... ......+||+.|+|||++.+..+.+.++|||||||++|+|++|..||.....      ........|..+++++.+
T Consensus       181 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~l~~  253 (335)
T 3dls_A          181 ERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEAAIHPPYLVSKELMS  253 (335)
T ss_dssp             CTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTTCCCCSSCCCHHHHH
T ss_pred             CCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhhccCCCcccCHHHHH
Confidence            443 3345678999999999998887767899999999999999999999976321      233445667779999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||.+||++||.+|||++++++||||+..
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          254 LVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             HHHHHccCChhhCcCHHHHhcCccccCC
Confidence            9999999999999999999999999764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.4e-51  Score=405.72  Aligned_cols=262  Identities=26%  Similarity=0.393  Sum_probs=213.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC----
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR----   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~----   81 (379)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++.+. .......+.+.+|+.+|+.++||||+++++++...    
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~  101 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK  101 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence            4567999999999999999999999999999999999754 33444567899999999999999999999999766    


Q ss_pred             -CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 -TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 -~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                       ..+|+||||+. ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus       102 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~  180 (432)
T 3n9x_A          102 FDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN  180 (432)
T ss_dssp             CCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred             CCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence             57999999995 6999999888889999999999999999999999999999999999999999999999999997654


Q ss_pred             CCc----------------------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-----------C
Q 016991          161 QGV----------------------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-----------Y  207 (379)
Q Consensus       161 ~~~----------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-----------~  207 (379)
                      ...                      ......+||+.|+|||++.....++.++||||+||++|+|++|           .
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~  260 (432)
T 3n9x_A          181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRF  260 (432)
T ss_dssp             ------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCC
T ss_pred             ccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccccc
Confidence            321                      1246778999999999976555557999999999999999984           4


Q ss_pred             CCCCCCCh-----------------HHH------------------------HHHHHhcccCCC-------CCCCHhHHH
Q 016991          208 LPFGETDL-----------------PTL------------------------YKKINAAEFSCP-------FWFSTGATS  239 (379)
Q Consensus       208 ~Pf~~~~~-----------------~~~------------------------~~~i~~~~~~~p-------~~~s~~~~~  239 (379)
                      ++|.+.+.                 ...                        ...+.......+       +.+|+++.+
T Consensus       261 p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  340 (432)
T 3n9x_A          261 PLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGIN  340 (432)
T ss_dssp             CSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHH
T ss_pred             ccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHH
Confidence            45544321                 011                        111111111111       347999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      ||.+||+.||.+|||++|+++||||+....
T Consensus       341 Ll~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          341 LLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             HHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence            999999999999999999999999987543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-51  Score=397.80  Aligned_cols=257  Identities=28%  Similarity=0.399  Sum_probs=215.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++....    
T Consensus        23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~  101 (367)
T 1cm8_A           23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD  101 (367)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence            3578999999999999999999999999999999986543 34445678899999999999999999999997653    


Q ss_pred             --eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           83 --KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                        .+|+||||+ |++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       102 ~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          102 FTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence              469999999 8899988876 689999999999999999999999999999999999999999999999999997654


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------  227 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------  227 (379)
                      .   .....+||+.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+.....             
T Consensus       180 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~  256 (367)
T 1cm8_A          180 S---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD  256 (367)
T ss_dssp             S---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             c---ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence            3   234568999999999998755556999999999999999999999998877655554432110             


Q ss_pred             ------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          228 ------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       228 ------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                        ..+...++++.+||.+||+.||.+|||++++++||||+....
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC-
T ss_pred             HHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhcC
Confidence                              122356899999999999999999999999999999987544

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=1.4e-52  Score=394.84  Aligned_cols=266  Identities=23%  Similarity=0.374  Sum_probs=225.8

Q ss_pred             CCccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         1 m~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      |.......++|++++.||+|+||.||+|++..+|+.||||++.............+.+|+.+++.++||||+++++++..
T Consensus         4 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   83 (311)
T 3ork_A            4 MTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEA   83 (311)
T ss_dssp             CCCCSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEE
T ss_pred             CCCcceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeec
Confidence            56677888999999999999999999999999999999999987665566666789999999999999999999999876


Q ss_pred             CC----eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           81 RT----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        81 ~~----~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      ..    ..|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        84 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           84 ETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIA  163 (311)
T ss_dssp             EETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred             cCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence            54    34999999999999999998899999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCc---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC----
Q 016991          157 ALPQQGV---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC----  229 (379)
Q Consensus       157 ~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----  229 (379)
                      .......   ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.......+.......    
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  242 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV-DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR  242 (311)
T ss_dssp             ------------------CCTTCCHHHHHTCCC-CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHH
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccc
Confidence            7654321   22334579999999999987766 489999999999999999999999888776655555444332    


Q ss_pred             CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          230 PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       230 p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +..+++++.+||.+||+.||.+||++.+++.|+|++..
T Consensus       243 ~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            24589999999999999999999999999999999753

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=8.3e-52  Score=381.79  Aligned_cols=261  Identities=38%  Similarity=0.660  Sum_probs=226.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++++.||+|+||.||+|.+..+|+.||||++......  ...+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   82 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence            568999999999999999999999999999999999765432  245778999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--cc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--~~  164 (379)
                      ||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......  ..
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  162 (276)
T 2yex_A           83 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  162 (276)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence            9999999999999988788999999999999999999999999999999999999999999999999998754322  12


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccCC--CCCCCHhHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSC--PFWFSTGATSLI  241 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~--p~~~s~~~~~li  241 (379)
                      .....+|++.|+|||++.+..+.+.++||||||+++|+|++|..||...+.. .....+.......  +..+++++.+||
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (276)
T 2yex_A          163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  242 (276)
T ss_dssp             CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             cccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHH
Confidence            3456689999999999987776668999999999999999999999876543 3333343333222  245899999999


Q ss_pred             HHccCCCCCCCCChHhHhcCccccccCC
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      .+||+.||.+|||++++++||||+....
T Consensus       243 ~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          243 HKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             HHHCCCCchhCCCHHHHhcCccccChhh
Confidence            9999999999999999999999986543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2.6e-51  Score=395.04  Aligned_cols=258  Identities=33%  Similarity=0.607  Sum_probs=227.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc-----chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----KHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++......     .....+.+.+|+.+++.+ +||||+++++++...
T Consensus        93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            46899999999999999999999999999999998764311     122346788999999999 799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +..|+||||++|++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.+|.+||+|||++.....
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            99999999999999999999888999999999999999999999999999999999999999999999999999876544


Q ss_pred             CcccccccccCCCCCchhhhccC-----CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CC
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNR-----GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FW  232 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~  232 (379)
                      . ......+||+.|+|||++.+.     ...+.++|||||||++|+|++|..||.+.+.......+....+..+    ..
T Consensus       253 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  331 (365)
T 2y7j_A          253 G-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDD  331 (365)
T ss_dssp             T-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSS
T ss_pred             C-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccccc
Confidence            3 234567899999999998642     2345899999999999999999999998888777777777665543    35


Q ss_pred             CCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          233 FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       233 ~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +++++.+||.+||+.||.+|||++++++||||++
T Consensus       332 ~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          332 RSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            7899999999999999999999999999999963

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.8e-51  Score=387.38  Aligned_cols=259  Identities=30%  Similarity=0.538  Sum_probs=217.2

Q ss_pred             eeccCeeee-eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 016991            6 RRVAKYEVG-RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~-~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~   83 (379)
                      ...++|++. +.||+|+||.||+|.+..+|+.||||++.....   ...+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus         9 ~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~   85 (316)
T 2ac3_A            9 RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG---HIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDR   85 (316)
T ss_dssp             CTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS---CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred             ccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc---hhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence            345689995 789999999999999999999999999976532   2346788999999884 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC---eEEeeeccccCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSALPQ  160 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~---lkl~DfGl~~~~~  160 (379)
                      .|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++....
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            9999999999999999998889999999999999999999999999999999999999998776   9999999987543


Q ss_pred             CC-------cccccccccCCCCCchhhhccC----CCCCCchhHHHHHHHHHHHHhCCCCCCCCC---------------
Q 016991          161 QG-------VELLHTTCGTPNYVAPEVLSNR----GYDGSAADVWSCGVILFVLMAGYLPFGETD---------------  214 (379)
Q Consensus       161 ~~-------~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---------------  214 (379)
                      ..       .......+||+.|+|||++.+.    ...+.++|||||||++|+|++|+.||.+.+               
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  245 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC  245 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhH
Confidence            21       1223456799999999998651    223589999999999999999999997654               


Q ss_pred             hHHHHHHHHhcccCCC----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          215 LPTLYKKINAAEFSCP----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       215 ~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ...+...+....+.+|    ..+++++.+||.+||+.||.+|||++++++||||+..
T Consensus       246 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             HHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             HHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence            2345666777766666    3589999999999999999999999999999999753

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=8.7e-52  Score=403.18  Aligned_cols=254  Identities=33%  Similarity=0.595  Sum_probs=211.2

Q ss_pred             ceeccCeeee-eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHH-HhCCCCCcceEEEEEEe--
Q 016991            5 TRRVAKYEVG-RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVRLHEVLAS--   80 (379)
Q Consensus         5 ~~~~~~y~~~-~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l-~~l~hp~Iv~l~~~~~~--   80 (379)
                      ...+++|.+. +.||+|+||+||+|.+..+|+.||||++...        ..+.+|+.++ +..+||||+++++++..  
T Consensus        57 ~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~  128 (400)
T 1nxk_A           57 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY  128 (400)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             CcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecc
Confidence            3567789887 7899999999999999999999999998642        3466788886 55689999999999875  


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CCCeEEeee
Q 016991           81 --RTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSDF  153 (379)
Q Consensus        81 --~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~~lkl~Df  153 (379)
                        ...+|+||||++||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+||
T Consensus       129 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence              667999999999999999998653  5999999999999999999999999999999999999997   789999999


Q ss_pred             ccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcccCC
Q 016991          154 GLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP----TLYKKINAAEFSC  229 (379)
Q Consensus       154 Gl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----~~~~~i~~~~~~~  229 (379)
                      |++...... ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+..    .....+....+.+
T Consensus       209 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~  286 (400)
T 1nxk_A          209 GFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKY-DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEF  286 (400)
T ss_dssp             TTCEECC------------CTTCCGGGSCCCCS-SSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCC
T ss_pred             ccccccCCC-CccccCCCCCCccCHhhcCCCCC-CCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccC
Confidence            998765432 33457789999999999977666 48999999999999999999999765432    2455666666555


Q ss_pred             C----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          230 P----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       230 p----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |    ..+|+++.+||.+||+.||.+|||++++++||||....
T Consensus       287 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          287 PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            4    35899999999999999999999999999999998643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.1e-51  Score=394.12  Aligned_cols=255  Identities=26%  Similarity=0.400  Sum_probs=219.2

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----CCCcceEEE
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-----HPNIVRLHE   76 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----hp~Iv~l~~   76 (379)
                      +++...-++|++.+.||+|+||+||+|++..+|+.||||++...    ....+....|+.+++.++     ||||+++++
T Consensus        28 ~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~  103 (360)
T 3llt_A           28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHG  103 (360)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred             ecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence            34566778999999999999999999999999999999998642    233466788999999987     999999999


Q ss_pred             EEEeCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc----------
Q 016991           77 VLASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS----------  144 (379)
Q Consensus        77 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~----------  144 (379)
                      ++...+..|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.          
T Consensus       104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~  182 (360)
T 3llt_A          104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITV  182 (360)
T ss_dssp             EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEE
T ss_pred             eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccch
Confidence            999999999999999 999999998754  5999999999999999999999999999999999999975          


Q ss_pred             ---------------CCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCC
Q 016991          145 ---------------YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLP  209 (379)
Q Consensus       145 ---------------~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~P  209 (379)
                                     ++.+||+|||++.....   .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.|
T Consensus       183 ~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD---YHGSIINTRQYRAPEVILNLGW-DVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             ECTTTCCEEEEEEESCCCEEECCCTTCEETTS---CCCSCCSCGGGCCHHHHTTCCC-CTTHHHHHHHHHHHHHHHSSCS
T ss_pred             hcccccccccccccCCCCEEEEeccCceecCC---CCcCccCcccccCcHHHcCCCC-CCccchHHHHHHHHHHHHCCCC
Confidence                           78999999999975443   2345679999999999988776 4999999999999999999999


Q ss_pred             CCCCChHHHHHHHHhcccCCCC----------------------------------------------CCCHhHHHHHHH
Q 016991          210 FGETDLPTLYKKINAAEFSCPF----------------------------------------------WFSTGATSLIHK  243 (379)
Q Consensus       210 f~~~~~~~~~~~i~~~~~~~p~----------------------------------------------~~s~~~~~li~~  243 (379)
                      |...+.......+.......|.                                              ..++.+.+||.+
T Consensus       259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  338 (360)
T 3llt_A          259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYS  338 (360)
T ss_dssp             CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHH
Confidence            9888766655554433222221                                              123678899999


Q ss_pred             ccCCCCCCCCChHhHhcCcccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      ||+.||.+|||++|+++||||+
T Consensus       339 ~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          339 ILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HhcCChhhCCCHHHHhcCcccC
Confidence            9999999999999999999995

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-51  Score=394.63  Aligned_cols=265  Identities=26%  Similarity=0.346  Sum_probs=217.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ....++|++++.||+|+||.||+|.+..+|+.||||++.......  ....+.+.+|+.+++.++||||+++++++...+
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            346789999999999999999999999999999999997543221  112346789999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..|+||||+++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  164 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS  164 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred             ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence            99999999976 888888654 4689999999999999999999999999999999999999999999999999987655


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-----CC-------
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-----SC-------  229 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-----~~-------  229 (379)
                      ........+||+.|+|||++.+....+.++|||||||++|+|++|.+||.+.+.......+.....     ..       
T Consensus       165 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          165 PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence            444556778999999999997665556899999999999999999999998887666655533210     00       


Q ss_pred             ----------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          230 ----------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       230 ----------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                                      ...+++++.+||.+||+.||.+|||++|+++||||+....+
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~  301 (346)
T 1ua2_A          245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  301 (346)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCC
Confidence                            13457899999999999999999999999999999875433

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.1e-51  Score=385.14  Aligned_cols=258  Identities=37%  Similarity=0.682  Sum_probs=227.4

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .+...++|++.+.||+|+||.||+|.+..+|+.||+|++......   ..+.+.+|+.+++.++||||+++++++.+.+.
T Consensus         4 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (304)
T 2jam_A            4 TTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKIKHENIVTLEDIYESTTH   80 (304)
T ss_dssp             --CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhCCCCCeeehhhhcccCCE
Confidence            345677999999999999999999999999999999999764322   23568899999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccccCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~~~~~  160 (379)
                      .|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             EEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            99999999999999999988999999999999999999999999999999999999999   788899999999987544


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHh
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTG  236 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~  236 (379)
                      .  ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....+.++    ..++++
T Consensus       161 ~--~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  237 (304)
T 2jam_A          161 N--GIMSTACGTPGYVAPEVLAQKPY-SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES  237 (304)
T ss_dssp             C--BTTHHHHSCCCBCCTTTBSSCSC-CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHH
T ss_pred             C--CccccccCCCCccChHHhccCCC-CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHH
Confidence            3  23345679999999999977665 4899999999999999999999999888888888877655433    457999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.+||.+||..||.+|||++++++||||+..
T Consensus       238 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          238 AKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999999864

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.1e-51  Score=384.77  Aligned_cols=263  Identities=30%  Similarity=0.596  Sum_probs=227.0

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc-hHHHHHHHHHHHHHHhCCCCCcceEEEEE--EeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-HRMVDQIKREISIMKIVRHPNIVRLHEVL--ASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~--~~~~   82 (379)
                      ...++|++++.||+|+||.||+|.+..++..||+|++....... ....+.+.+|+.+++.++||||+++++++  .+..
T Consensus         2 ~l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            2 KLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             ---CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---
T ss_pred             ccccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCC
Confidence            35789999999999999999999999999999999997654321 23457799999999999999999999998  4556


Q ss_pred             eEEEEEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           83 KVYIILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      ..|+||||++++ |.+.+..  ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            899999999876 7777765  4579999999999999999999999999999999999999999999999999987654


Q ss_pred             C--CcccccccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhH
Q 016991          161 Q--GVELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       161 ~--~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  237 (379)
                      .  .........||+.|+|||++.+.. +.+.++|||||||++|+|++|..||.+.+.......+....+..|..+++++
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l  240 (305)
T 2wtk_C          161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPL  240 (305)
T ss_dssp             TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHH
T ss_pred             ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCCCccCHHH
Confidence            3  223344667999999999997543 3357899999999999999999999999888888889888888999999999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      .+||.+||+.||.+|||++++++||||+....
T Consensus       241 ~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          241 SDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             HHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            99999999999999999999999999987544

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=7.4e-51  Score=379.76  Aligned_cols=262  Identities=30%  Similarity=0.545  Sum_probs=228.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc------chHHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL------KHRMVDQIKREISIMKIVR-HPNIVRLHEV   77 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~------~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~   77 (379)
                      ....++|++.+.||+|+||.||+|.+..+|+.||||++......      .....+.+.+|+.+++.+. ||||++++++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            45678999999999999999999999999999999999764311      1233467889999999996 9999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           78 LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        78 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      +...+..|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A           93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence            99999999999999999999999988899999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhcc-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC--
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSN-----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP--  230 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p--  230 (379)
                      ..... ......+|++.|+|||++.+     ....+.++||||||+++|+|++|..||...+.......+....+..+  
T Consensus       173 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  251 (298)
T 1phk_A          173 QLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP  251 (298)
T ss_dssp             ECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             hcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc
Confidence            65443 23455679999999999852     23346899999999999999999999998888777777777665543  


Q ss_pred             --CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          231 --FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       231 --~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                        ..+++++.+||.+||+.||.+|||++++++||||+..
T Consensus       252 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          252 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             cccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence              2479999999999999999999999999999999854

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=4.3e-51  Score=378.61  Aligned_cols=258  Identities=34%  Similarity=0.627  Sum_probs=225.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++........   ...+.+.+|+.+++.++||||+++++++...+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            4689999999999999999999999999999999976543221   1246789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC----CeEEeeeccccCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQ  160 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~----~lkl~DfGl~~~~~  160 (379)
                      |+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||+++.++    .+||+|||++....
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~  163 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE  163 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred             EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence            99999999999999998888999999999999999999999999999999999999998877    89999999987654


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHh
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTG  236 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~  236 (379)
                      .. ......+|++.|+|||++.+..+ +.++||||||+++|+|++|..||.+.+.......+.......+    ..+++.
T Consensus       164 ~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T 3bhy_A          164 AG-NEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL  241 (283)
T ss_dssp             ---------CCCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHH
T ss_pred             CC-CcccccCCCcCccCcceecCCCC-CcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHH
Confidence            43 22345679999999999977665 5899999999999999999999999888777777776665544    457999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.+||.+||..||.+|||+.++++||||+..
T Consensus       242 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence            9999999999999999999999999999753

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=5.9e-51  Score=392.18  Aligned_cols=257  Identities=27%  Similarity=0.423  Sum_probs=219.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----Ce
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----TK   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----~~   83 (379)
                      ++|++++.||+|+||.||+|.+..++..||||++....  .....+.+.+|+.+++.++||||+++++++...     ..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            59999999999999999999999999999999986532  334557789999999999999999999999754     47


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      .|+||||+. ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus       105 ~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence            999999996 589888865 679999999999999999999999999999999999999999999999999997654421


Q ss_pred             ---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------
Q 016991          164 ---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------  227 (379)
Q Consensus       164 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------  227 (379)
                         ......+||+.|+|||++.+....+.++|||||||++|+|++|++||.+.+.......+.....             
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  262 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL  262 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence               2234568999999999987666557999999999999999999999988876665555432100             


Q ss_pred             ------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          228 ------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       228 ------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                        ..+..+++++.+||.+||+.||.+|||++|+++||||+..+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence                              012347899999999999999999999999999999987654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.2e-51  Score=396.69  Aligned_cols=253  Identities=31%  Similarity=0.550  Sum_probs=217.5

Q ss_pred             cCeee--eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            9 AKYEV--GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         9 ~~y~~--~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +.|.+  .+.||+|+||.||+|.+..+|+.||+|++.....   ...+.+.+|+.+|+.++||||+++++++...+..|+
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  163 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVL  163 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            34555  6789999999999999999999999999976432   344678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE--ccCCCeEEeeeccccCCCCCc
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL--DSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll--~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      ||||++|++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+  +.++.+||+|||++...... 
T Consensus       164 v~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~-  242 (373)
T 2x4f_A          164 VMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR-  242 (373)
T ss_dssp             EEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT-
T ss_pred             EEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc-
Confidence            99999999999988654 479999999999999999999999999999999999999  56678999999999765443 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGATS  239 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~  239 (379)
                      ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.......+    ..+++++.+
T Consensus       243 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  321 (373)
T 2x4f_A          243 EKLKVNFGTPEFLAPEVVNYDFV-SFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKE  321 (373)
T ss_dssp             CBCCCCCSSCTTCCHHHHTTCBC-CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHH
T ss_pred             cccccccCCCcEeChhhccCCCC-CcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHH
Confidence            23445679999999999976554 5899999999999999999999999888888888777665544    358999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||.+||+.||.+|||+.++++||||+.
T Consensus       322 li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          322 FISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            999999999999999999999999974

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=6.4e-51  Score=380.62  Aligned_cols=261  Identities=22%  Similarity=0.364  Sum_probs=222.4

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      +...-++|++++.||+|+||.||+|++..++..||+|++...........+.+.+|+.+++.++||||+++++++...+.
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~   85 (294)
T 4eqm_A            6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC   85 (294)
T ss_dssp             SSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSE
T ss_pred             hhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCe
Confidence            44567899999999999999999999999999999999977665566667889999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      .|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        86 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           86 YYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred             EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence            99999999999999999998999999999999999999999999999999999999999999999999999997654422


Q ss_pred             -ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-----CCCCCCCHhH
Q 016991          164 -ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-----SCPFWFSTGA  237 (379)
Q Consensus       164 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-----~~p~~~s~~~  237 (379)
                       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+.............     ..+..+++.+
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEAT-DECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL  244 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCC-CTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred             ccccCccccCccccCHhHhcCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence             22345679999999999987666 5899999999999999999999998887655444433322     2345689999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      .++|.+||..||.+||+..+.+.+.|..
T Consensus       245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          245 SNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            9999999999999999766667766654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.7e-51  Score=392.27  Aligned_cols=261  Identities=31%  Similarity=0.512  Sum_probs=219.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL--KHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      .++|++++.||+|+||.||+|.+..++..||+|++.+....  .....+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence            46899999999999999999999999999999999765432  2334578999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHHHHHH
Q 016991           86 IILEFVTGGELFDKIVH----------------------------------------QGRLLENDCRRYFQQLIDAVAHC  125 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~----------------------------------------~~~l~e~~~~~~~~qil~~l~yl  125 (379)
                      +||||++||+|.+++..                                        ...+++..++.++.||+.||.||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999998842                                        11236778899999999999999


Q ss_pred             HHCCceeecCCCCcEEEccCC--CeEEeeeccccCCCCC----cccccccccCCCCCchhhhccC-CCCCCchhHHHHHH
Q 016991          126 HSKGVYHRDLKPENLLLDSYG--NLKVSDFGLSALPQQG----VELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGV  198 (379)
Q Consensus       126 H~~gi~HrDlkp~NIll~~~~--~lkl~DfGl~~~~~~~----~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGv  198 (379)
                      |++||+||||||+||+++.++  .+||+|||++......    .......+||+.|+|||++.+. ...+.++|||||||
T Consensus       185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~  264 (345)
T 3hko_A          185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV  264 (345)
T ss_dssp             HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred             HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence            999999999999999998777  8999999998754321    1123566799999999999652 34468999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          199 ILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       199 il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ++|+|++|..||.+.+.......+.......+.    .+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence            999999999999998887777777666554332    3799999999999999999999999999999998643

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-51  Score=393.49  Aligned_cols=261  Identities=32%  Similarity=0.582  Sum_probs=225.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~-~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      ..+++|++.+.||+|+||.||+|++.   .+|+.||||++.+.... .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        51 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  130 (355)
T 1vzo_A           51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  130 (355)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             ccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee
Confidence            44689999999999999999999984   58999999999764431 112234577899999999 69999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      .+..|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       131 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          131 ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence            99999999999999999999988899999999999999999999999999999999999999999999999999987544


Q ss_pred             C-CcccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHhcccCCCCCCC
Q 016991          161 Q-GVELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGET----DLPTLYKKINAAEFSCPFWFS  234 (379)
Q Consensus       161 ~-~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~----~~~~~~~~i~~~~~~~p~~~s  234 (379)
                      . ........+||+.|+|||++.+. ...+.++|||||||++|+|++|..||...    ....+.+.+.......|..++
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (355)
T 1vzo_A          211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS  290 (355)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred             cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccC
Confidence            3 22334456899999999999753 23468999999999999999999999653    334556666677778888999


Q ss_pred             HhHHHHHHHccCCCCCCCC-----ChHhHhcCccccc
Q 016991          235 TGATSLIHKILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +.+.+||.+||+.||.+||     |++++++||||+.
T Consensus       291 ~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            9999999999999999999     9999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=8.2e-51  Score=376.51  Aligned_cols=258  Identities=21%  Similarity=0.274  Sum_probs=217.8

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      .-.....++|++.+.||+|+||.||+|.+..+|+.||||++........ ....+.+|+..+..+ +||||+++++++.+
T Consensus         4 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~   82 (289)
T 1x8b_A            4 GMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNALREVYAHAVLGQHSHVVRYFSAWAE   82 (289)
T ss_dssp             -CCCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH-HHHHHHHHHHHHHHSCSCTTBCCEEEEEEE
T ss_pred             cccccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH-HHHHHHHHHHHHHHhCCCCCeeeeeeeeec
Confidence            3345567899999999999999999999999999999999976543332 346788899999998 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-----------
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-----------  145 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-----------  145 (379)
                      .+..|+||||++|++|.+++...    +.+++..++.++.||+.||.|||++||+||||||+||+++.+           
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~  162 (289)
T 1x8b_A           83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGD  162 (289)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------
T ss_pred             CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccc
Confidence            99999999999999999999765    679999999999999999999999999999999999999854           


Q ss_pred             --------CCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH
Q 016991          146 --------GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT  217 (379)
Q Consensus       146 --------~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~  217 (379)
                              ..+||+|||++......    ...+||+.|+|||++.+....+.++|||||||++|+|++|.+|+.....  
T Consensus       163 ~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--  236 (289)
T 1x8b_A          163 EDDWASNKVMFKIGDLGHVTRISSP----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--  236 (289)
T ss_dssp             -------CCCEEECCCTTCEETTCS----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH--
T ss_pred             cccccCCceEEEEcccccccccCCc----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH--
Confidence                    47999999998765432    2346999999999998765556799999999999999999987754432  


Q ss_pred             HHHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          218 LYKKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       218 ~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                       ...+... ....|..+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       237 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          237 -WHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             -HHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             -HHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence             2333333 345677899999999999999999999999999999999754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=8.5e-51  Score=389.06  Aligned_cols=254  Identities=25%  Similarity=0.392  Sum_probs=221.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .+|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            46999999999999999999999999999999997655444555678999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           89 EFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        89 E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      ||+. |+|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......    .
T Consensus       134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----~  208 (348)
T 1u5q_A          134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----N  208 (348)
T ss_dssp             ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB----C
T ss_pred             ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC----C
Confidence            9997 57777775 4568999999999999999999999999999999999999999999999999998765432    3


Q ss_pred             ccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC--CCCCCCHhHHHHHHH
Q 016991          168 TTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS--CPFWFSTGATSLIHK  243 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~  243 (379)
                      ..+||+.|+|||++..  .+..+.++|||||||++|+|++|..||.+.+.......+......  .+..+++.+.+||.+
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  288 (348)
T 1u5q_A          209 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDS  288 (348)
T ss_dssp             CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHH
T ss_pred             cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHH
Confidence            5679999999999853  233458999999999999999999999888776555555444322  345689999999999


Q ss_pred             ccCCCCCCCCChHhHhcCcccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||+.||.+|||++++++||||...
T Consensus       289 ~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          289 CLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             HTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             HcccChhhCcCHHHHhhChhhhcc
Confidence            999999999999999999999754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=2.1e-51  Score=402.85  Aligned_cols=258  Identities=38%  Similarity=0.673  Sum_probs=211.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc-----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-----HRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~-----~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..++|++.+.||+|+||+||+|.+..+++.||||++.+.....     ......+.+|+.+|+.++||||+++++++.. 
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-  211 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-  211 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence            3578999999999999999999999999999999998754321     1122357899999999999999999999864 


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSAL  158 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~  158 (379)
                      +..|+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+|||++..
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~  291 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  291 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTS
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeeccccee
Confidence            56899999999999999998888999999999999999999999999999999999999997654   599999999986


Q ss_pred             CCCCcccccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcccCCC----C
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDL-PTLYKKINAAEFSCP----F  231 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~~~~~p----~  231 (379)
                      .... ....+.+||+.|+|||++.+  ....+.++|||||||++|+|++|.+||.+... ......+....+..+    .
T Consensus       292 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~  370 (419)
T 3i6u_A          292 LGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  370 (419)
T ss_dssp             CC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHT
T ss_pred             cCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhc
Confidence            5442 33456789999999999854  23335799999999999999999999976543 345555665555443    3


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .+++++.+||.+||+.||.+|||++++++||||+.
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            57999999999999999999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.4e-51  Score=394.62  Aligned_cols=252  Identities=29%  Similarity=0.401  Sum_probs=211.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS------   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~------   80 (379)
                      ..++|++++.||+|+||+||+|.+..+|+.||||++.....       ...+|+.+|+.++||||+++++++..      
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~   77 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP   77 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence            45789999999999999999999999999999999865432       22379999999999999999999843      


Q ss_pred             --------------------------------CCeEEEEEeccCCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHH
Q 016991           81 --------------------------------RTKVYIILEFVTGGELFDKIV----HQGRLLENDCRRYFQQLIDAVAH  124 (379)
Q Consensus        81 --------------------------------~~~~~lv~E~~~gg~L~~~l~----~~~~l~e~~~~~~~~qil~~l~y  124 (379)
                                                      ...+++||||++| +|.+.+.    ....+++..++.++.||+.||.|
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~  156 (383)
T 3eb0_A           78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF  156 (383)
T ss_dssp             --------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                                            3458999999975 6666554    45789999999999999999999


Q ss_pred             HHHCCceeecCCCCcEEEc-cCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHH
Q 016991          125 CHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVL  203 (379)
Q Consensus       125 lH~~gi~HrDlkp~NIll~-~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~l  203 (379)
                      ||++||+||||||+|||++ .++.+||+|||++...... ......+||+.|+|||++.+....+.++||||+||++|+|
T Consensus       157 LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS-EPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL  235 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT-SCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             HHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC-CCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence            9999999999999999998 6889999999999765443 2345667899999999998766557999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHhc-----------------cc------------CCCCCCCHhHHHHHHHccCCCCCCCCC
Q 016991          204 MAGYLPFGETDLPTLYKKINAA-----------------EF------------SCPFWFSTGATSLIHKILDPNPKTRIR  254 (379)
Q Consensus       204 l~g~~Pf~~~~~~~~~~~i~~~-----------------~~------------~~p~~~s~~~~~li~~~L~~dP~~R~s  254 (379)
                      ++|++||.+.+.......+...                 ..            .+|..+++++.+||.+||+.||.+|||
T Consensus       236 l~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (383)
T 3eb0_A          236 ILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN  315 (383)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            9999999988766555444221                 00            135568999999999999999999999


Q ss_pred             hHhHhcCcccccc
Q 016991          255 IEGIRKHPWFRKN  267 (379)
Q Consensus       255 ~~~il~hp~f~~~  267 (379)
                      +.|+++||||+..
T Consensus       316 ~~e~l~hp~f~~~  328 (383)
T 3eb0_A          316 PYEAMAHPFFDHL  328 (383)
T ss_dssp             HHHHHTSGGGHHH
T ss_pred             HHHHhcCHHHHHH
Confidence            9999999999753

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=4.7e-51  Score=384.57  Aligned_cols=251  Identities=26%  Similarity=0.393  Sum_probs=205.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHH-HhCCCCCcceEEEEEEeCCeEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l-~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .++|++.+.||+|+||+||+|.+..+|+.||||++.......... .....|+..+ +..+||||+++++++.+.+..|+
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~-~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l  134 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDR-ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL  134 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHH-HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHH-HHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence            468999999999999999999999999999999986644333333 3344455444 45599999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||+ +++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ..
T Consensus       135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-~~  212 (311)
T 3p1a_A          135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-GA  212 (311)
T ss_dssp             EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred             EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC-CC
Confidence            99999 778988887654 6999999999999999999999999999999999999999999999999998765432 23


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc--CCCCCCCHhHHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF--SCPFWFSTGATSLIHK  243 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~  243 (379)
                      ....+||+.|+|||++.+ .+ +.++||||+||++|+|++|..||.+.+   ....+.....  ..+..+++++.+||.+
T Consensus       213 ~~~~~gt~~y~aPE~~~~-~~-~~~~DiwslG~il~el~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~  287 (311)
T 3p1a_A          213 GEVQEGDPRYMAPELLQG-SY-GTAADVFSLGLTILEVACNMELPHGGE---GWQQLRQGYLPPEFTAGLSSELRSVLVM  287 (311)
T ss_dssp             --CCCCCGGGCCGGGGGT-CC-STHHHHHHHHHHHHHHHHTCCCCSSHH---HHHHHTTTCCCHHHHTTSCHHHHHHHHH
T ss_pred             CcccCCCccccCHhHhcC-CC-CchhhHHHHHHHHHHHHhCCCCCCCcc---HHHHHhccCCCcccccCCCHHHHHHHHH
Confidence            345679999999999875 44 589999999999999999976654432   2222222221  2345689999999999


Q ss_pred             ccCCCCCCCCChHhHhcCccccc
Q 016991          244 ILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       244 ~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||++||.+|||++++++||||+.
T Consensus       288 ~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          288 MLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999974

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=6.2e-51  Score=392.74  Aligned_cols=257  Identities=26%  Similarity=0.380  Sum_probs=202.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----   81 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...     
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~  105 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE  105 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence            4579999999999999999999999999999999986543 3334557788999999999999999999999654     


Q ss_pred             -CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 -TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 -~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                       ...|+|+||+ +++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus       106 ~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          106 FNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             CCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence             5689999999 7899888865 689999999999999999999999999999999999999999999999999987644


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--------------  226 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--------------  226 (379)
                      .   .....+||+.|+|||++.+....+.++||||+||++|+|++|+.||.+.+.......+....              
T Consensus       184 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~  260 (367)
T 2fst_X          184 D---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE  260 (367)
T ss_dssp             ----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred             c---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhH
Confidence            3   23456899999999999875555799999999999999999999999887665554443210              


Q ss_pred             ---------cC--------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          227 ---------FS--------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       227 ---------~~--------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                               ..        .....++++.+||.+||+.||.+|||++++++||||+....
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence                     00        01246889999999999999999999999999999986544

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.6e-51  Score=387.88  Aligned_cols=256  Identities=25%  Similarity=0.400  Sum_probs=210.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT---   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~---   82 (379)
                      ..+++|++++.||+|+||.||+|++..+|+.||||++....  .....+.+.+|+.+|+.++||||+++++++.+..   
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~   80 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK   80 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence            45689999999999999999999999999999999997644  2334578999999999999999999999986543   


Q ss_pred             ------------------------------------------------------eEEEEEeccCCCChHHHHHhcCC---
Q 016991           83 ------------------------------------------------------KVYIILEFVTGGELFDKIVHQGR---  105 (379)
Q Consensus        83 ------------------------------------------------------~~~lv~E~~~gg~L~~~l~~~~~---  105 (379)
                                                                            ..|+||||++|++|.+++.....   
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~  160 (332)
T 3qd2_B           81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED  160 (332)
T ss_dssp             HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred             hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence                                                                  38999999999999999987653   


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc------------ccccccccCC
Q 016991          106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV------------ELLHTTCGTP  173 (379)
Q Consensus       106 l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~------------~~~~~~~gt~  173 (379)
                      .++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......            ......+||+
T Consensus       161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  240 (332)
T 3qd2_B          161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK  240 (332)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence            4556789999999999999999999999999999999999999999999987655431            1234467999


Q ss_pred             CCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC-CCCCCCHhHHHHHHHccCCCCCCC
Q 016991          174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS-CPFWFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       174 ~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p~~~s~~~~~li~~~L~~dP~~R  252 (379)
                      .|+|||++.+..+ +.++|||||||++|+|++|..|+..  .......+.....+ .+...++++.+||.+||+.||.+|
T Consensus       241 ~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  317 (332)
T 3qd2_B          241 LYMSPEQIHGNNY-SHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTER  317 (332)
T ss_dssp             GGSCHHHHHCCCC-CTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred             CccChHHhcCCCC-cchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcC
Confidence            9999999987766 5999999999999999999877522  12222233332221 112357888999999999999999


Q ss_pred             CChHhHhcCccccc
Q 016991          253 IRIEGIRKHPWFRK  266 (379)
Q Consensus       253 ~s~~~il~hp~f~~  266 (379)
                      ||++++++||||+.
T Consensus       318 ps~~~~l~~~~f~~  331 (332)
T 3qd2_B          318 PEATDIIENAIFEN  331 (332)
T ss_dssp             CCHHHHHHSTTCCC
T ss_pred             CCHHHHhhchhhhc
Confidence            99999999999974

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=6.3e-51  Score=376.72  Aligned_cols=259  Identities=31%  Similarity=0.552  Sum_probs=226.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA--SRTKV   84 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~~~~~   84 (379)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.  .....
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence            578999999999999999999999999999999999765433 334577999999999999999999999874  46789


Q ss_pred             EEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeecCCCCcEEEccCCCeEEeeecc
Q 016991           85 YIILEFVTGGELFDKIVHQ----GRLLENDCRRYFQQLIDAVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~----~~l~e~~~~~~~~qil~~l~ylH~~g-----i~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                      |+||||++|++|.+++...    ..+++..++.++.||+.||.|||+.|     |+||||||+||+++.++.+||+|||+
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            9999999999999999754    34999999999999999999999999     99999999999999999999999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCC
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFS  234 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s  234 (379)
                      +.............+|++.|+|||++.+..+ +.++||||||+++|+|++|..||...+.......+..... ..|..++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  241 (279)
T 2w5a_A          163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS  241 (279)
T ss_dssp             HHHC---CHHHHHHHSCCTTCCHHHHHCC-C-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCTTSC
T ss_pred             heeeccccccccccCCCccccChHHhccCCC-CchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCcccC
Confidence            8765544334456679999999999987665 4899999999999999999999999888777777776655 5677899


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +++.++|.+||+.||.+|||++++++|+|+...
T Consensus       242 ~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~  274 (279)
T 2w5a_A          242 DELNEIITRMLNLKDYHRPSVEEILENPLILEH  274 (279)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence            999999999999999999999999999999754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.2e-50  Score=374.48  Aligned_cols=252  Identities=23%  Similarity=0.418  Sum_probs=218.2

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----RTKVY   85 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----~~~~~   85 (379)
                      .|++.+.||+|+||.||+|.+..++..||+|++...... ....+.+.+|+.+++.++||||+++++++..    ...+|
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  105 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV  105 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence            589999999999999999999999999999999765443 3346788999999999999999999999875    46799


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEc-cCCCeEEeeeccccCCCCC
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~-~~~~lkl~DfGl~~~~~~~  162 (379)
                      +||||+++++|.+++...+.+++..++.++.||+.||.|||++|  |+||||||+||+++ .++.+||+|||++......
T Consensus       106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~  185 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence            99999999999999998899999999999999999999999999  99999999999998 7899999999998754432


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhcc--cCCCCCCCHhHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL-PTLYKKINAAE--FSCPFWFSTGATS  239 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~~--~~~p~~~s~~~~~  239 (379)
                        .....+||+.|+|||++.+ . .+.++|||||||++|+|++|..||..... ......+....  ..++...++++.+
T Consensus       186 --~~~~~~~t~~y~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  261 (290)
T 1t4h_A          186 --FAKAVIGTPEFMAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKE  261 (290)
T ss_dssp             --SBEESCSSCCCCCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHH
T ss_pred             --ccccccCCcCcCCHHHHhc-c-CCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHH
Confidence              3345679999999999864 3 46899999999999999999999987544 34444444432  2345567899999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ||.+||+.||.+|||++++++||||+.
T Consensus       262 li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          262 IIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHccCChhhCCCHHHHhhCccccc
Confidence            999999999999999999999999975

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=8.3e-51  Score=390.19  Aligned_cols=259  Identities=25%  Similarity=0.390  Sum_probs=221.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      +....++|++.+.||+|+||.||+|.+..+|..||+|++....  .....+.+.+|+.+++.++||||+++++++...+.
T Consensus        28 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  105 (360)
T 3eqc_A           28 GELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGE  105 (360)
T ss_dssp             CCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTE
T ss_pred             cccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCE
Confidence            3456789999999999999999999999999999999997653  33455789999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .|+||||++|++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||++..... 
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-  184 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-  184 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-
T ss_pred             EEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc-
Confidence            999999999999999999888999999999999999999999996 999999999999999999999999998864322 


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH---------------------
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK---------------------  221 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~---------------------  221 (379)
                       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......                     
T Consensus       185 -~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (360)
T 3eqc_A          185 -SMANSFVGTRSYMSPERLQGTHY-SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR  262 (360)
T ss_dssp             -HC----CCCCTTCCHHHHTTCCC-SHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred             -ccccCCCCCCCeECHHHHcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence             22345679999999999987665 4899999999999999999999987665433221                     


Q ss_pred             ---------------------HHhcc-cCC-CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          222 ---------------------INAAE-FSC-PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       222 ---------------------i~~~~-~~~-p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                           +.... ... +..+++++.+||.+||+.||.+|||++++++||||+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          263 PLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             -----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                                 11111 112 22478999999999999999999999999999999753

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=8.7e-51  Score=392.14  Aligned_cols=257  Identities=29%  Similarity=0.439  Sum_probs=208.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT---   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~---   82 (379)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+   
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~  100 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE  100 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTT
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccc
Confidence            35689999999999999999999999999999999997643 23445577889999999999999999999997655   


Q ss_pred             ---eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           83 ---KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        83 ---~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                         ..|+||||+++ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       101 ~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          101 EFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  177 (371)
T ss_dssp             TCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred             cccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence               78999999965 7888775  56999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc------------
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF------------  227 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~------------  227 (379)
                      ... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.....            
T Consensus       178 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  255 (371)
T 2xrw_A          178 GTS-FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP  255 (371)
T ss_dssp             -------------CTTCCHHHHTTCCC-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCH
T ss_pred             ccc-cccCCceecCCccCHHHhcCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            432 23445689999999999988766 4899999999999999999999998877665555432110            


Q ss_pred             ----------C--------------CCC------CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          228 ----------S--------------CPF------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       228 ----------~--------------~p~------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                .              +|.      ..++++.+||.+||+.||.+|||++|+++||||+..+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          256 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             HHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhhc
Confidence                      0              010      0156789999999999999999999999999997644

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.4e-51  Score=393.25  Aligned_cols=260  Identities=26%  Similarity=0.503  Sum_probs=228.0

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH--------------HHHHHHHHHHHHHhCCC
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR--------------MVDQIKREISIMKIVRH   68 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~--------------~~~~~~~Ei~~l~~l~h   68 (379)
                      .+....++|++++.||+|+||.||+|.+  +|+.||||++.........              ..+.+.+|+.+++.++|
T Consensus        25 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  102 (348)
T 2pml_X           25 EKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN  102 (348)
T ss_dssp             SSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC
T ss_pred             hcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC
Confidence            4566789999999999999999999999  8999999999765432211              12678999999999999


Q ss_pred             CCcceEEEEEEeCCeEEEEEeccCCCChHHH------HHh--cCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCc
Q 016991           69 PNIVRLHEVLASRTKVYIILEFVTGGELFDK------IVH--QGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPEN  139 (379)
Q Consensus        69 p~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~------l~~--~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~N  139 (379)
                      |||+++++++.+.+..|+||||++|++|.++      +..  ...+++..++.++.||+.||.|||+ +||+||||||+|
T Consensus       103 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N  182 (348)
T 2pml_X          103 EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN  182 (348)
T ss_dssp             TTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG
T ss_pred             CCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh
Confidence            9999999999999999999999999999988      655  5689999999999999999999999 999999999999


Q ss_pred             EEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HH
Q 016991          140 LLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDL-PT  217 (379)
Q Consensus       140 Ill~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~  217 (379)
                      |+++.++.+||+|||++......  .....+|++.|+|||++.+. .+.+.++|||||||++|+|++|..||...+. ..
T Consensus       183 il~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  260 (348)
T 2pml_X          183 ILMDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE  260 (348)
T ss_dssp             EEECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred             EEEcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            99999999999999998765432  34566799999999999876 4433399999999999999999999988776 67


Q ss_pred             HHHHHHhcccCCC-------------------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          218 LYKKINAAEFSCP-------------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       218 ~~~~i~~~~~~~p-------------------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ....+.......|                   ..+++++.+||.+||+.||.+|||++++++||||+.
T Consensus       261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~  328 (348)
T 2pml_X          261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD  328 (348)
T ss_dssp             HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTT
T ss_pred             HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccC
Confidence            7777777776666                   568999999999999999999999999999999974

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=2.1e-50  Score=396.89  Aligned_cols=255  Identities=26%  Similarity=0.415  Sum_probs=214.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC------CCCCcceEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV------RHPNIVRLHEVL   78 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l------~hp~Iv~l~~~~   78 (379)
                      .....+|++++.||+|+||.||+|.+..+++.||||++....    ...+.+.+|+.+++.+      +|+||+++++++
T Consensus        93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~  168 (429)
T 3kvw_A           93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF  168 (429)
T ss_dssp             CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred             CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence            345678999999999999999999999999999999996532    3345677888888776      577999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC--eEEeeec
Q 016991           79 ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN--LKVSDFG  154 (379)
Q Consensus        79 ~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~--lkl~DfG  154 (379)
                      ...+.+|+||||+. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||
T Consensus       169 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG  247 (429)
T 3kvw_A          169 TFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG  247 (429)
T ss_dssp             EETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred             ccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecc
Confidence            99999999999995 68999987754  4999999999999999999999999999999999999999987  9999999


Q ss_pred             cccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------
Q 016991          155 LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------  227 (379)
Q Consensus       155 l~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------  227 (379)
                      ++.....   ...+.+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.+.+.......+....-       
T Consensus       248 ~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~  323 (429)
T 3kvw_A          248 SSCYEHQ---RVYTYIQSRFYRAPEVILGARY-GMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL  323 (429)
T ss_dssp             TCEETTC---CCCSSCSCGGGCCHHHHHTBCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             cceecCC---cccccCCCCCccChHHHhCCCC-CchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence            9865433   2346789999999999988776 5999999999999999999999998876655444321100       


Q ss_pred             ----------------------------------------------------CCCCCCCHhHHHHHHHccCCCCCCCCCh
Q 016991          228 ----------------------------------------------------SCPFWFSTGATSLIHKILDPNPKTRIRI  255 (379)
Q Consensus       228 ----------------------------------------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~  255 (379)
                                                                          .++...++++.+||.+||+.||++|||+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta  403 (429)
T 3kvw_A          324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTP  403 (429)
T ss_dssp             HTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCH
Confidence                                                                0111237889999999999999999999


Q ss_pred             HhHhcCccccccC
Q 016991          256 EGIRKHPWFRKNY  268 (379)
Q Consensus       256 ~~il~hp~f~~~~  268 (379)
                      +|+++||||+...
T Consensus       404 ~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          404 GQALRHPWLRRRL  416 (429)
T ss_dssp             HHHHTSTTTC---
T ss_pred             HHHhCChhhccCC
Confidence            9999999998654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.7e-50  Score=384.54  Aligned_cols=259  Identities=25%  Similarity=0.424  Sum_probs=214.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH--PNIVRLHEVLASRTKVY   85 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h--p~Iv~l~~~~~~~~~~~   85 (379)
                      -.+|++++.||+|+||.||+|.+. +++.||||++..... .....+.+.+|+.+|+.++|  |||+++++++.....+|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            457999999999999999999984 689999999976543 34456789999999999986  99999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-  164 (379)
                      +|||+ .+++|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++........ 
T Consensus        86 lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           86 MVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             EEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred             EEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence            99995 5889999999989999999999999999999999999999999999999997 58899999999986654322 


Q ss_pred             -cccccccCCCCCchhhhcc----------CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH--hcccCCC
Q 016991          165 -LLHTTCGTPNYVAPEVLSN----------RGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKIN--AAEFSCP  230 (379)
Q Consensus       165 -~~~~~~gt~~y~aPE~l~~----------~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~--~~~~~~p  230 (379)
                       .....+||+.|+|||++.+          ....+.++|||||||++|+|++|..||.+.... .....+.  .....+|
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  243 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP  243 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc
Confidence             2346689999999999864          133468999999999999999999999764332 3333332  2344567


Q ss_pred             CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          231 FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      ...++++.+||.+||+.||.+|||+.++++||||+....+
T Consensus       244 ~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~  283 (343)
T 3dbq_A          244 DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  283 (343)
T ss_dssp             CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCCC-
T ss_pred             ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccCCc
Confidence            7789999999999999999999999999999999865443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=2.5e-50  Score=391.55  Aligned_cols=257  Identities=25%  Similarity=0.410  Sum_probs=216.3

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC--CCCcceEEEEEEeCCeEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR--HPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+|++++.||+|+||+||+|.+.. ++.||||++..... .....+.+.+|+.+|+.++  ||||+++++++...+.+|+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            459999999999999999999875 99999999976543 3445678999999999997  5999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc--c
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--E  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~--~  164 (379)
                      ||| +.+++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.......  .
T Consensus       134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-------
T ss_pred             EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccc
Confidence            999 56889999999988999999999999999999999999999999999999996 5899999999998664422  1


Q ss_pred             cccccccCCCCCchhhhccC----------CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHhc--ccCCCC
Q 016991          165 LLHTTCGTPNYVAPEVLSNR----------GYDGSAADVWSCGVILFVLMAGYLPFGETDL-PTLYKKINAA--EFSCPF  231 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~----------~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~~~~i~~~--~~~~p~  231 (379)
                      .....+||+.|+|||++.+.          ..++.++|||||||++|+|++|+.||..... ......+...  ...+|.
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~  291 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD  291 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCC
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCc
Confidence            23467899999999999652          2346899999999999999999999977533 2333444332  345677


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      +.++++.+||.+||+.||.+|||+.++++||||+....
T Consensus       292 ~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~  329 (390)
T 2zmd_A          292 IPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTH  329 (390)
T ss_dssp             CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC-
T ss_pred             cchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccCc
Confidence            88999999999999999999999999999999986543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.3e-51  Score=384.64  Aligned_cols=259  Identities=24%  Similarity=0.411  Sum_probs=215.4

Q ss_pred             CCccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         1 m~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      |.++...-++|++.+.||+|+||+||+|.+..+|+.||||++.......  ..+.+.+|+.+++.++||||+++++++..
T Consensus         1 m~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   78 (319)
T 4euu_A            1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (319)
T ss_dssp             -CEEECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCcccCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCCcceEEEEeec
Confidence            6677888899999999999999999999999999999999997654333  24677899999999999999999999986


Q ss_pred             CC--eEEEEEeccCCCChHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE----ccCCCeEEe
Q 016991           81 RT--KVYIILEFVTGGELFDKIVHQGR---LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVS  151 (379)
Q Consensus        81 ~~--~~~lv~E~~~gg~L~~~l~~~~~---l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll----~~~~~lkl~  151 (379)
                      .+  ..|+||||++|++|.+++.....   +++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEc
Confidence            55  78999999999999999976543   9999999999999999999999999999999999999    777889999


Q ss_pred             eeccccCCCCCcccccccccCCCCCchhhhcc-------CCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh----HHHHH
Q 016991          152 DFGLSALPQQGVELLHTTCGTPNYVAPEVLSN-------RGYDGSAADVWSCGVILFVLMAGYLPFGETDL----PTLYK  220 (379)
Q Consensus       152 DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~----~~~~~  220 (379)
                      |||++...... ......+||+.|+|||++..       ....+.++|||||||++|+|++|..||.....    .....
T Consensus       159 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~  237 (319)
T 4euu_A          159 DFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY  237 (319)
T ss_dssp             CCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHH
T ss_pred             cCCCceecCCC-CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHH
Confidence            99999765443 23345679999999999862       23446899999999999999999999964332    23333


Q ss_pred             HHHhccc---------------------C----CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCc
Q 016991          221 KINAAEF---------------------S----CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHP  262 (379)
Q Consensus       221 ~i~~~~~---------------------~----~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp  262 (379)
                      .+.....                     +    .+..+++.+.+||.+||+.||++|||++|+++||
T Consensus       238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             HHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            3333221                     1    1122456788999999999999999999999997

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=3.2e-50  Score=378.76  Aligned_cols=257  Identities=28%  Similarity=0.448  Sum_probs=215.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||+||+|.+  +|..||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            34567999999999999999999987  588999999976543 334457789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           85 YIILEFVTGGELFDKIVHQGR---LLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~---l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      |+||||++||+|.+++...+.   +++..+..++.||+.||.|||++|  |+||||||+|||++.++.+||+|||++...
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~  189 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK  189 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence            999999999999999987553   999999999999999999999999  999999999999999999999999999765


Q ss_pred             CCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH--hcccCCCCCCCHhH
Q 016991          160 QQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKIN--AAEFSCPFWFSTGA  237 (379)
Q Consensus       160 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~  237 (379)
                      ..........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.  ......|..+++++
T Consensus       190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  268 (309)
T 3p86_A          190 ASTFLSSKSAAGTPEWMAPEVLRDEPS-NEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQV  268 (309)
T ss_dssp             ------------CCTTSCHHHHTTCCC-CTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHH
T ss_pred             cccccccccCCCCccccChhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHH
Confidence            544334456789999999999987766 589999999999999999999999888777666653  34566788899999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhc--Ccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRK--HPWFR  265 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~--hp~f~  265 (379)
                      .+||.+||+.||.+|||++++++  +++++
T Consensus       269 ~~li~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          269 AAIIEGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999999999999987  45554

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.8e-50  Score=377.80  Aligned_cols=260  Identities=29%  Similarity=0.441  Sum_probs=218.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++++.||+|+||.||+|.+..+|..||+|++.....   ...+.+.+|+.+++.++||||+++++++...+..
T Consensus        15 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   91 (302)
T 2j7t_A           15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE---EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKL   91 (302)
T ss_dssp             SCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CE
T ss_pred             cCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH---HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeE
Confidence            3456799999999999999999999999999999999865432   2346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence            999999999999998875 4679999999999999999999999999999999999999999999999999875332222


Q ss_pred             ccccccccCCCCCchhhhc----cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCHh
Q 016991          164 ELLHTTCGTPNYVAPEVLS----NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTG  236 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~  236 (379)
                      ......+||+.|+|||++.    .....+.++|||||||++|+|++|..||...+.......+.....   ..|..++.+
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (302)
T 2j7t_A          172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVE  251 (302)
T ss_dssp             HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHH
T ss_pred             cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHH
Confidence            2234567999999999984    233345899999999999999999999998887766666555432   345668999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.++|.+||+.||.+|||++++++||||+..
T Consensus       252 l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          252 FRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             HHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             HHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            9999999999999999999999999999753

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2e-50  Score=381.73  Aligned_cols=259  Identities=38%  Similarity=0.682  Sum_probs=216.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc-----chHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----KHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++......     .......+.+|+.+++.++||||+++++++..
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            3457899999999999999999999999999999999764321     11223458899999999999999999999877


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC---eEEeeecccc
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSDFGLSA  157 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~---lkl~DfGl~~  157 (379)
                      .. .|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+|||++.
T Consensus        87 ~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           87 ED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             SS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             Cc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            65 8999999999999999988889999999999999999999999999999999999999987665   9999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccCCC----
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSCP----  230 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~p----  230 (379)
                      ..... ......+||+.|+|||++..  ....+.++|||||||++|+|++|..||...... .+...+....+..+    
T Consensus       166 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (322)
T 2ycf_A          166 ILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW  244 (322)
T ss_dssp             ECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH
T ss_pred             ecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh
Confidence            65432 23345679999999999842  333458999999999999999999999765433 44445555544332    


Q ss_pred             CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          231 FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ..+++++.+||.+||+.||.+|||++++++||||+.
T Consensus       245 ~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             hhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            457999999999999999999999999999999974

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2.1e-50  Score=375.30  Aligned_cols=259  Identities=36%  Similarity=0.623  Sum_probs=228.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++++.||+|+||.||+|.+..+++.||||++....... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   96 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSF   96 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch-HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence            456789999999999999999999999999999999997654322 2346789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl~DfGl~~~~~~  161 (379)
                      |+||||+++++|.+.+...+.+++..++.++.||+.||.|||++||+||||||+||+++.++   .+||+|||++.....
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A           97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred             EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence            99999999999999998888999999999999999999999999999999999999997644   699999999876544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                      . .......|++.|+|||++.+.  .+.++||||||+++|+|++|..||.+.+.......+....+..+    ..+++++
T Consensus       177 ~-~~~~~~~~~~~y~aPE~~~~~--~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T 2wei_A          177 N-TKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDA  253 (287)
T ss_dssp             C-SSCSCHHHHHTTCCHHHHTTC--CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHH
T ss_pred             C-CccccccCcccccChHHhcCC--CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHH
Confidence            3 223455689999999998653  45899999999999999999999999888888777777665443    3579999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .++|.+||..||.+|||+.++++||||+..
T Consensus       254 ~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          254 KDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            999999999999999999999999999754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.5e-50  Score=383.75  Aligned_cols=259  Identities=31%  Similarity=0.531  Sum_probs=222.1

Q ss_pred             eeccCeeee-eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe
Q 016991            6 RRVAKYEVG-RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~-~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~   83 (379)
                      ..-++|.+. +.||+|+||.||+|.+..+|+.||||++.+..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~  103 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAVLELAKSCPRVINLHEVYENTSE  103 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTE-ECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence            445678888 89999999999999999999999999997654322 23467889999999995 6999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CCCeEEeeeccccC
Q 016991           84 VYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSDFGLSAL  158 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~~lkl~DfGl~~~  158 (379)
                      .|+||||++||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||++..
T Consensus       104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~  183 (327)
T 3lm5_A          104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK  183 (327)
T ss_dssp             EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred             EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence            99999999999999988553  67999999999999999999999999999999999999997   78999999999976


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCC
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFS  234 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s  234 (379)
                      .... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+.......+    ..++
T Consensus       184 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  261 (327)
T 3lm5_A          184 IGHA-CELREIMGTPEYLAPEILNYDPI-TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS  261 (327)
T ss_dssp             C----------CCCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSC
T ss_pred             cCCc-cccccccCCcCccCCeeecCCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccC
Confidence            5443 22345689999999999987666 4899999999999999999999999888777777766554433    3579


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.+.+||.+||+.||.+|||++++++||||+..
T Consensus       262 ~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~  294 (327)
T 3lm5_A          262 QLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW  294 (327)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence            999999999999999999999999999999754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=5.8e-50  Score=375.01  Aligned_cols=258  Identities=25%  Similarity=0.408  Sum_probs=227.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++.......  ..+.+.+|+.+++.++||||+++++++......|+
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   97 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI   97 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST--THHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH--HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            3467999999999999999999999999999999997654322  35789999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||||++|++|.+++.. +.+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++..........
T Consensus        98 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  176 (303)
T 3a7i_A           98 IMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR  176 (303)
T ss_dssp             EEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB
T ss_pred             EEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccccc
Confidence            9999999999998865 689999999999999999999999999999999999999999999999999987655443344


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHcc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L  245 (379)
                      ...+||+.|+|||++.+..+ +.++||||||+++|+|++|..||...+.......+.... ...+..+++++.+||.+||
T Consensus       177 ~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  255 (303)
T 3a7i_A          177 NTFVGTPFWMAPEVIKQSAY-DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACL  255 (303)
T ss_dssp             CCCCSCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCSSCCHHHHHHHHHHC
T ss_pred             CccCCCcCccCHHHHhcCCC-CchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCCCCccccCHHHHHHHHHHc
Confidence            56679999999999987665 489999999999999999999998887766665554433 3456678999999999999


Q ss_pred             CCCCCCCCChHhHhcCccccccC
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      +.||.+|||++++++||||....
T Consensus       256 ~~dp~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          256 NKEPSFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHHHC
T ss_pred             CCChhhCcCHHHHhhChhhhcCC
Confidence            99999999999999999997653

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.1e-50  Score=375.02  Aligned_cols=259  Identities=23%  Similarity=0.337  Sum_probs=203.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++..... .....+.+.++...++.++||||+++++++...+..|
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~   82 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW   82 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEE
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEE
Confidence            457899999999999999999999999999999999976432 2223344556666688899999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           86 IILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +||||++| +|.+.+..    ...+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++....
T Consensus        83 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A           83 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             EEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             EEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            99999974 77666643    46899999999999999999999998 99999999999999999999999999987654


Q ss_pred             CCcccccccccCCCCCchhhhc---cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-H-HHHHHHHhcccCCC-CCCC
Q 016991          161 QGVELLHTTCGTPNYVAPEVLS---NRGYDGSAADVWSCGVILFVLMAGYLPFGETDL-P-TLYKKINAAEFSCP-FWFS  234 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~-~~~~~i~~~~~~~p-~~~s  234 (379)
                      .. ......+||+.|+|||++.   .....+.++||||+||++|+|++|..||..... . .....+.......+ ..++
T Consensus       162 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T 3fme_A          162 DD-VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS  240 (290)
T ss_dssp             ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSC
T ss_pred             cc-ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCC
Confidence            42 2234457999999999972   333346899999999999999999999986332 2 33333343333333 4689


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +++.+||.+||+.||.+|||++++++||||+..
T Consensus       241 ~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          241 AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            999999999999999999999999999999753

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.6e-50  Score=393.51  Aligned_cols=255  Identities=30%  Similarity=0.421  Sum_probs=210.0

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-   82 (379)
                      +.....+|++++.||+|+||+||+|.+..++. ||+|.+......       ..+|+.+++.++||||+++++++...+ 
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~-------~~~E~~il~~l~h~niv~l~~~~~~~~~  106 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF-------KNRELQIMRIVKHPNVVDLKAFFYSNGD  106 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS-------CCHHHHHHHTCCCTTBCCEEEEEEEESS
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch-------HHHHHHHHHhCCCCCcceEEEEEEecCC
Confidence            34566789999999999999999999987766 888877554321       236999999999999999999996443 


Q ss_pred             -----eEEEEEeccCCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc-cCCCeEEee
Q 016991           83 -----KVYIILEFVTGGELFDKIV----HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSD  152 (379)
Q Consensus        83 -----~~~lv~E~~~gg~L~~~l~----~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~-~~~~lkl~D  152 (379)
                           .+|+||||++++ +...+.    ....+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus       107 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~D  185 (394)
T 4e7w_A          107 KKDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLID  185 (394)
T ss_dssp             SSSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             CCCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEee
Confidence                 388999999765 333332    356899999999999999999999999999999999999999 789999999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-------
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA-------  225 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~-------  225 (379)
                      ||++...... ......+||+.|+|||++.+...++.++||||+||++|+|++|++||.+.+.......+...       
T Consensus       186 FG~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~  264 (394)
T 4e7w_A          186 FGSAKILIAG-EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE  264 (394)
T ss_dssp             CTTCEECCTT-CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             CCCcccccCC-CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            9999765443 23346678999999999977665679999999999999999999999988766554443221       


Q ss_pred             ----------cc------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 ----------EF------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 ----------~~------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                ..            .++..+++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence                      01            12345789999999999999999999999999999998643

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=6.2e-50  Score=379.07  Aligned_cols=251  Identities=25%  Similarity=0.449  Sum_probs=211.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEe--CCe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLAS--RTK   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~--~~~   83 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++....      .+.+.+|+.+++.++ ||||+++++++..  ...
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRT  107 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc------hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence            4678999999999999999999999999999999986432      357889999999997 9999999999987  678


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~  162 (379)
                      .++||||+++++|.+++.   .+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++......
T Consensus       108 ~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             EEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             eEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence            999999999999988874   489999999999999999999999999999999999999777 8999999999765443


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHH-------------HHHHhcccC
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLY-------------KKINAAEFS  228 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~-------------~~i~~~~~~  228 (379)
                       ......+|++.|+|||++.+....+.++|||||||++|+|++|..||.... .....             ..+......
T Consensus       185 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  263 (330)
T 3nsz_A          185 -QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  263 (330)
T ss_dssp             -CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             -CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence             234566899999999999875556799999999999999999999995432 21111             111111111


Q ss_pred             C------------------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          229 C------------------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       229 ~------------------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .                        +..+++++.+||.+||+.||.+|||++|+++||||+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence            1                        12279999999999999999999999999999999854

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.9e-50  Score=376.64  Aligned_cols=255  Identities=27%  Similarity=0.473  Sum_probs=218.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++....     ..+.+.+|+.+++.++||||+++++++...+..|+
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI  101 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            4568999999999999999999999999999999987643     23568899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||+++++|.+++. ....+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus       102 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (314)
T 3com_A          102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK  181 (314)
T ss_dssp             EEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred             EeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence            999999999999987 4568999999999999999999999999999999999999999999999999998765544334


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHHHHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIH  242 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~li~  242 (379)
                      .....|++.|+|||++.+..+ +.++||||||+++|+|++|..||...+.......+....   +..|..+++++.+||.
T Consensus       182 ~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  260 (314)
T 3com_A          182 RNTVIGTPFWMAPEVIQEIGY-NCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVK  260 (314)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCB-CTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHH
T ss_pred             cCccCCCCCccChhhcCCCCC-CccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHH
Confidence            456679999999999987765 489999999999999999999998877655544443332   3345668999999999


Q ss_pred             HccCCCCCCCCChHhHhcCcccccc
Q 016991          243 KILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +||..||.+|||+.++++||||+..
T Consensus       261 ~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          261 QCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             HHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             HHccCChhhCcCHHHHHhCHHHhcC
Confidence            9999999999999999999999754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=6e-52  Score=401.06  Aligned_cols=249  Identities=16%  Similarity=0.214  Sum_probs=207.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHH---HHHhCCCCCcceEE-------EE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS---IMKIVRHPNIVRLH-------EV   77 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~---~l~~l~hp~Iv~l~-------~~   77 (379)
                      .++|++.+.||+|+||.||+|.+..+|+.||||++.+.........+.+.+|+.   +++.++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            478999999999999999999999999999999998665555556688999995   55556899999998       77


Q ss_pred             EEeCCe-----------------EEEEEeccCCCChHHHHHhcCCCCH-------HHHHHHHHHHHHHHHHHHHCCceee
Q 016991           78 LASRTK-----------------VYIILEFVTGGELFDKIVHQGRLLE-------NDCRRYFQQLIDAVAHCHSKGVYHR  133 (379)
Q Consensus        78 ~~~~~~-----------------~~lv~E~~~gg~L~~~l~~~~~l~e-------~~~~~~~~qil~~l~ylH~~gi~Hr  133 (379)
                      +...+.                 .|+||||+ +|+|.+++...+.+++       ..+..++.||+.||+|||++||+||
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr  230 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT  230 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            776543                 89999999 6899999987666666       7788899999999999999999999


Q ss_pred             cCCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccC-----------CCCCCchhHHHHHHHHHH
Q 016991          134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR-----------GYDGSAADVWSCGVILFV  202 (379)
Q Consensus       134 Dlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----------~~~~~~~DiwSlGvil~~  202 (379)
                      ||||+|||++.+|.+||+|||++.....   .....+| +.|+|||++.+.           .+ +.++|||||||++|+
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~-~~~~DvwSlG~il~e  305 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLM-TFSFDAWALGLVIYW  305 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEEC-CHHHHHHHHHHHHHH
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccC-ChhhhHHHHHHHHHH
Confidence            9999999999999999999999875332   3456678 999999999876           45 589999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          203 LMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       203 ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      |++|+.||.+.+.......+    ...+..+++++.+||.+||+.||.+|||+.++++||||+.
T Consensus       306 lltg~~Pf~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          306 IWCADLPITKDAALGGSEWI----FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHSSCCC------CCSGGG----GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHCCCCCcccccccchhhh----hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            99999999776543332222    2334578999999999999999999999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.8e-50  Score=394.04  Aligned_cols=254  Identities=29%  Similarity=0.392  Sum_probs=209.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----   81 (379)
                      ...+|++.+.||+|+||.||+|.+..+|+.||||++.....       ...+|+.+|+.++||||+++++++...     
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~  124 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD  124 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTT
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCc
Confidence            34579999999999999999999999999999999865431       234799999999999999999988532     


Q ss_pred             -CeEEEEEeccCCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeecc
Q 016991           82 -TKVYIILEFVTGGELFDKIV----HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGL  155 (379)
Q Consensus        82 -~~~~lv~E~~~gg~L~~~l~----~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl  155 (379)
                       ..+++||||+++ +|.+.+.    ....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+
T Consensus       125 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          125 EVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchh
Confidence             247799999975 5655554    34689999999999999999999999999999999999999965 5689999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-----------
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA-----------  224 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~-----------  224 (379)
                      +...... ......+||+.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+..           
T Consensus       204 a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~  282 (420)
T 1j1b_A          204 AKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR  282 (420)
T ss_dssp             CEECCTT-CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred             hhhcccC-CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            9765433 2234568999999999997765556999999999999999999999998876554443322           


Q ss_pred             ------cccC------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          225 ------AEFS------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       225 ------~~~~------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                            ..+.            ++..+++++.+||.+||+.||.+|||+.|+++||||+....
T Consensus       283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  345 (420)
T ss_dssp             HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccccc
Confidence                  1111            23456899999999999999999999999999999976543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3.7e-50  Score=385.16  Aligned_cols=260  Identities=25%  Similarity=0.394  Sum_probs=204.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe--
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK--   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~--   83 (379)
                      ..+++|++.+.||+|+||.||+|.+..+|+.||||++.......    ....+++..++.++||||+++++++...+.  
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC----CHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc----HHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            45789999999999999999999999999999999986543222    345567888888999999999999865433  


Q ss_pred             -----EEEEEeccCCCChHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHH--HCCceeecCCCCcEEEcc-CCCeEEe
Q 016991           84 -----VYIILEFVTGGELFDKI----VHQGRLLENDCRRYFQQLIDAVAHCH--SKGVYHRDLKPENLLLDS-YGNLKVS  151 (379)
Q Consensus        84 -----~~lv~E~~~gg~L~~~l----~~~~~l~e~~~~~~~~qil~~l~ylH--~~gi~HrDlkp~NIll~~-~~~lkl~  151 (379)
                           +++||||+++ +|...+    .....+++..++.++.||+.||.|||  ++||+||||||+|||++. ++.+||+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~  174 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC  174 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence                 8999999976 444433    34568899999999999999999999  999999999999999997 8999999


Q ss_pred             eeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-----
Q 016991          152 DFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-----  226 (379)
Q Consensus       152 DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-----  226 (379)
                      |||++...... ......+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+....     
T Consensus       175 Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          175 DFGSAKKLSPS-EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CCTTCBCCCTT-SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             eCCCceecCCC-CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence            99999865543 233456789999999999776656799999999999999999999999888766555543210     


Q ss_pred             ---------------------------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCCC
Q 016991          227 ---------------------------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV  271 (379)
Q Consensus       227 ---------------------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~~  271 (379)
                                                 ...+...++++.+||.+||+.||.+|||+.|+++||||+....+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  325 (360)
T 3e3p_A          254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA  325 (360)
T ss_dssp             HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred             HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCCcc
Confidence                                       011122567899999999999999999999999999998765443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.4e-49  Score=380.16  Aligned_cols=261  Identities=29%  Similarity=0.412  Sum_probs=217.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC---
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR---   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~---   81 (379)
                      ....++|++.+.||+|+||.||+|.+..+|+.||||++....  .......+.+|+.+++.++||||+++++++...   
T Consensus         7 ~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   84 (353)
T 2b9h_A            7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFE   84 (353)
T ss_dssp             CCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCST
T ss_pred             cccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccC
Confidence            345679999999999999999999999999999999986432  334456788999999999999999999988654   


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                        ...|+||||+. ++|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        85 ~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           85 NFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             TCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             ccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence              67999999996 589888876 68999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCcc----------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----
Q 016991          160 QQGVE----------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA----  225 (379)
Q Consensus       160 ~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~----  225 (379)
                      .....          .....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...    
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  242 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP  242 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence            43211          1234578999999999876555578999999999999999999999887765444333210    


Q ss_pred             --------------------cc--------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          226 --------------------EF--------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       226 --------------------~~--------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                          ..        ..+..+++++.+||.+||+.||.+|||++++++||||+....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence                                00        012357899999999999999999999999999999986543

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=7.6e-50  Score=378.67  Aligned_cols=256  Identities=28%  Similarity=0.439  Sum_probs=216.7

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEE-CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC------CcceE
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQN-RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP------NIVRL   74 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~-~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp------~Iv~l   74 (379)
                      +.+....++|++.+.||+|+||.||+|.+ ..+|+.||||++...    ....+.+.+|+.+++.++|+      +|+++
T Consensus         7 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~   82 (339)
T 1z57_A            7 QSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQM   82 (339)
T ss_dssp             STTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred             ecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence            45667778999999999999999999998 568899999998643    23456788999999888765      49999


Q ss_pred             EEEEEeCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc--------
Q 016991           75 HEVLASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS--------  144 (379)
Q Consensus        75 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~--------  144 (379)
                      ++++...+..|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.        
T Consensus        83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~  161 (339)
T 1z57_A           83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYN  161 (339)
T ss_dssp             EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC
T ss_pred             ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccC
Confidence            99999999999999999 899999998765  6889999999999999999999999999999999999987        


Q ss_pred             -----------CCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          145 -----------YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       145 -----------~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                                 ++.+||+|||++.....   .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...
T Consensus       162 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~  237 (339)
T 1z57_A          162 PKIKRDERTLINPDIKVVDFGSATYDDE---HHSTLVSTRHYRAPEVILALGW-SQPCDVWSIGCILIEYYLGFTVFPTH  237 (339)
T ss_dssp             ----CEEEEESCCCEEECCCSSCEETTS---CCCSSCSCGGGCCHHHHTTSCC-CTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             CccccccccccCCCceEeeCcccccCcc---ccccccCCccccChHHhhCCCC-CcchhhHHHHHHHHHHHhCCCCCCCC
Confidence                       66899999999875443   2345679999999999987766 48999999999999999999999887


Q ss_pred             ChHHHHHHHHhcccCC--------------------------------------------CCCCCHhHHHHHHHccCCCC
Q 016991          214 DLPTLYKKINAAEFSC--------------------------------------------PFWFSTGATSLIHKILDPNP  249 (379)
Q Consensus       214 ~~~~~~~~i~~~~~~~--------------------------------------------p~~~s~~~~~li~~~L~~dP  249 (379)
                      +.......+.......                                            +...++++.+||.+||+.||
T Consensus       238 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  317 (339)
T 1z57_A          238 DSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP  317 (339)
T ss_dssp             CHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred             ChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence            7655444332211111                                            11235678899999999999


Q ss_pred             CCCCChHhHhcCccccc
Q 016991          250 KTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       250 ~~R~s~~~il~hp~f~~  266 (379)
                      .+|||++|+++||||+.
T Consensus       318 ~~Rpt~~ell~hp~f~~  334 (339)
T 1z57_A          318 AKRITLREALKHPFFDL  334 (339)
T ss_dssp             TTSCCHHHHTTSGGGGG
T ss_pred             ccccCHHHHhcCHHHHH
Confidence            99999999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-49  Score=376.41  Aligned_cols=258  Identities=26%  Similarity=0.393  Sum_probs=214.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS----   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~----   80 (379)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++.....    ..+.+.+|+.+++.+ +||||+++++++..    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence            346799999999999999999999999999999999875432    235788999999998 79999999999976    


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           81 --RTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        81 --~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                        .+..|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~  176 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS  176 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence              56899999999999999999764  57999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc--CCC
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF--SCP  230 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~--~~p  230 (379)
                      .............+||+.|+|||++..    ....+.++|||||||++|+|++|..||.+.+.......+.....  ..+
T Consensus       177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  256 (326)
T 2x7f_A          177 AQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS  256 (326)
T ss_dssp             C-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSC
T ss_pred             eecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCc
Confidence            765543334456679999999999962    23345899999999999999999999988776665555544332  234


Q ss_pred             CCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          231 FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       231 ~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ..+++.+.+||.+||..||.+|||++++++||||+..
T Consensus       257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             cccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence            5689999999999999999999999999999999854

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=2.3e-49  Score=382.22  Aligned_cols=255  Identities=25%  Similarity=0.389  Sum_probs=214.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE--
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV--   84 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~--   84 (379)
                      .-++|.+.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+..  
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~  118 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  118 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence            4579999999999999999999999999999999997643 3344567889999999999999999999999877665  


Q ss_pred             ----EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           85 ----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        85 ----~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                          |+||||+. ++|.+.+  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       119 ~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          119 FYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             ceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence                99999996 5787766  3459999999999999999999999999999999999999999999999999987554


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------  227 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------  227 (379)
                      .   .....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+....-             
T Consensus       196 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  272 (371)
T 4exu_A          196 A---EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  272 (371)
T ss_dssp             -------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCH
T ss_pred             c---CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhh
Confidence            3   234567999999999998745556999999999999999999999998876655544422100             


Q ss_pred             ------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          228 ------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       228 ------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                        ..+..+++++.+||.+||+.||.+|||++|+++||||+...
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence                              11234689999999999999999999999999999998543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-49  Score=373.92  Aligned_cols=261  Identities=27%  Similarity=0.376  Sum_probs=213.5

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE---
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA---   79 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~---   79 (379)
                      ++...-++|++++.||+|+||.||+|.+..+|+.||||++...   .....+.+.+|+.+++.++||||+++++++.   
T Consensus         5 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A            5 HGFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSG   81 (320)
T ss_dssp             -CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred             ccCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence            3456678999999999999999999999999999999998653   3445678899999999999999999999873   


Q ss_pred             -----------eCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc-cCCC
Q 016991           80 -----------SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGN  147 (379)
Q Consensus        80 -----------~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~-~~~~  147 (379)
                                 .....|+||||+. |+|.+++.. +++++..++.++.||+.||+|||++||+||||||+||+++ .++.
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTE
T ss_pred             cccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCe
Confidence                       4478999999997 589888864 6899999999999999999999999999999999999997 5679


Q ss_pred             eEEeeeccccCCCCC---cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q 016991          148 LKVSDFGLSALPQQG---VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINA  224 (379)
Q Consensus       148 lkl~DfGl~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~  224 (379)
                      +||+|||++......   ........|++.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+..
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  239 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE  239 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999998765431   12234556899999999987655556899999999999999999999998876655554432


Q ss_pred             ccc------------------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          225 AEF------------------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       225 ~~~------------------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ...                              ..+..+++++.+||.+||+.||.+|||++++++||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            210                              11245799999999999999999999999999999998543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=3.1e-50  Score=392.65  Aligned_cols=258  Identities=26%  Similarity=0.424  Sum_probs=196.2

Q ss_pred             eccCeee-eeeecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eC
Q 016991            7 RVAKYEV-GRTIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA--SR   81 (379)
Q Consensus         7 ~~~~y~~-~~~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~~   81 (379)
                      ..+.|++ +++||+|+||+||+|++.  .++..||||++.....     ...+.+|+.+|+.++||||+++++++.  ..
T Consensus        18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   92 (405)
T 3rgf_A           18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHAD   92 (405)
T ss_dssp             HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTT
T ss_pred             hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCC
Confidence            3456887 568999999999999976  5789999999975432     245778999999999999999999995  47


Q ss_pred             CeEEEEEeccCCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE----ccCCCe
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ---------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNL  148 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~---------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll----~~~~~l  148 (379)
                      ..+|+||||+. ++|.+.+...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+
T Consensus        93 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           93 RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            78999999995 5788877532         249999999999999999999999999999999999999    778899


Q ss_pred             EEeeeccccCCCCCc---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------
Q 016991          149 KVSDFGLSALPQQGV---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP---------  216 (379)
Q Consensus       149 kl~DfGl~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~---------  216 (379)
                      ||+|||++.......   ......+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..         
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence            999999998654321   23456789999999999987665679999999999999999999999765431         


Q ss_pred             HHHHHHH-hcccCC-------------------------------------CCCCCHhHHHHHHHccCCCCCCCCChHhH
Q 016991          217 TLYKKIN-AAEFSC-------------------------------------PFWFSTGATSLIHKILDPNPKTRIRIEGI  258 (379)
Q Consensus       217 ~~~~~i~-~~~~~~-------------------------------------p~~~s~~~~~li~~~L~~dP~~R~s~~~i  258 (379)
                      .....+. ....+.                                     ....++++.+||.+||+.||.+|||++|+
T Consensus       252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~  331 (405)
T 3rgf_A          252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA  331 (405)
T ss_dssp             HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            1222211 111100                                     01127789999999999999999999999


Q ss_pred             hcCccccccCCC
Q 016991          259 RKHPWFRKNYNP  270 (379)
Q Consensus       259 l~hp~f~~~~~~  270 (379)
                      ++||||+....+
T Consensus       332 L~hp~f~~~~~~  343 (405)
T 3rgf_A          332 MQDPYFLEDPLP  343 (405)
T ss_dssp             HTSGGGTSSSCC
T ss_pred             hcChhhccCCCC
Confidence            999999876543

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2.3e-50  Score=376.90  Aligned_cols=261  Identities=26%  Similarity=0.437  Sum_probs=198.4

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+..+|+.||||++......  ...+.+.+|+.+++.++||||+++++++...+..
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   88 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL   88 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence            45567999999999999999999999999999999998654322  2346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           85 YIILEFVTGGELFDKIVH--------QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~--------~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      |+||||++|++|.+++..        .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~  168 (303)
T 2vwi_A           89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS  168 (303)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred             EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence            999999999999999874        456999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCc-----ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc----
Q 016991          157 ALPQQGV-----ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF----  227 (379)
Q Consensus       157 ~~~~~~~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~----  227 (379)
                      .......     ......+||+.|+|||++.+....+.++|||||||++|+|++|..||...+.............    
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  248 (303)
T 2vwi_A          169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE  248 (303)
T ss_dssp             HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTT
T ss_pred             heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccc
Confidence            6543321     1234567999999999997633346899999999999999999999988766554443332221    


Q ss_pred             ------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          228 ------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       228 ------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                            ..+..+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       249 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             C-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             cccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence                  1224578899999999999999999999999999999754

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=6.1e-50  Score=387.97  Aligned_cols=255  Identities=25%  Similarity=0.411  Sum_probs=210.8

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC--------CCCcce
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR--------HPNIVR   73 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--------hp~Iv~   73 (379)
                      +.+....++|++.+.||+|+||+||+|++..+|+.||||++...    ....+.+.+|+.+++.++        ||||++
T Consensus        30 ~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~  105 (397)
T 1wak_A           30 KIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ  105 (397)
T ss_dssp             CTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred             ehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence            34456678999999999999999999999999999999998653    234567889999999886        788999


Q ss_pred             EEEEEE----eCCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCC
Q 016991           74 LHEVLA----SRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        74 l~~~~~----~~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~  146 (379)
                      +++++.    ....+|+||||+ +++|.+.+...  +.+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus       106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            999987    566899999999 67777777654  4699999999999999999999998 999999999999999775


Q ss_pred             -------------------------------------------------CeEEeeeccccCCCCCcccccccccCCCCCc
Q 016991          147 -------------------------------------------------NLKVSDFGLSALPQQGVELLHTTCGTPNYVA  177 (379)
Q Consensus       147 -------------------------------------------------~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~a  177 (379)
                                                                       .+||+|||++......   ....+||+.|+|
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~a  261 (397)
T 1wak_A          185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRS  261 (397)
T ss_dssp             HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCC
T ss_pred             hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccC
Confidence                                                             7999999998765432   345679999999


Q ss_pred             hhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHh------------c--------------
Q 016991          178 PEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL------PTLYKKINA------------A--------------  225 (379)
Q Consensus       178 PE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~------~~~~~~i~~------------~--------------  225 (379)
                      ||++.+..+ +.++|||||||++|+|++|..||...+.      ......+..            .              
T Consensus       262 PE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  340 (397)
T 1wak_A          262 LEVLIGSGY-NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK  340 (397)
T ss_dssp             HHHHHTSCC-CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred             ChhhcCCCC-CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence            999988776 4899999999999999999999976542      111111111            0              


Q ss_pred             ----------------ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          226 ----------------EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       226 ----------------~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                                      .+..+...++++.+||.+||+.||++|||++|+++||||+
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                            0111223456788999999999999999999999999996

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.5e-49  Score=372.10  Aligned_cols=256  Identities=24%  Similarity=0.380  Sum_probs=216.2

Q ss_pred             CCccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         1 m~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      |.......++|++++.||+|+||+||+|.+..+|+.||+|++...   .....+.+.+|+.+++.++||||+++++++.+
T Consensus         2 ~p~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   78 (310)
T 3s95_A            2 MPHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK   78 (310)
T ss_dssp             CCCEEECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred             CcceeeChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEec
Confidence            344556789999999999999999999999999999999988542   34456789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .+..|+||||++|++|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  158 (310)
T 3s95_A           79 DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLM  158 (310)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEEC
T ss_pred             CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceec
Confidence            9999999999999999999987 568999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCccc--------------ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHH
Q 016991          160 QQGVEL--------------LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY---KKI  222 (379)
Q Consensus       160 ~~~~~~--------------~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~---~~i  222 (379)
                      ......              ....+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.........   ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~  237 (310)
T 3s95_A          159 VDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSY-DEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR  237 (310)
T ss_dssp             C--------------------CCCCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHH
T ss_pred             ccccccccccccccccccccccccCCCcceeCHHHhcCCCC-CcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhh
Confidence            432111              125679999999999987666 48999999999999999999999653321100   000


Q ss_pred             HhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          223 NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       223 ~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .......|..+++++.++|.+||+.||.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          238 GFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            11112356778999999999999999999999999987

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1e-49  Score=382.68  Aligned_cols=262  Identities=24%  Similarity=0.377  Sum_probs=210.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc--------cchHHHHHHHHHHHHHHhCCCCCcceEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--------LKHRMVDQIKREISIMKIVRHPNIVRLHEV   77 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~--------~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~   77 (379)
                      ...++|++++.||+|+||.||+|.+.. |..||||++.....        ......+.+.+|+.+++.++||||++++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   97 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDI   97 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEE
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeee
Confidence            345799999999999999999999865 99999999865322        223345789999999999999999999999


Q ss_pred             EEe-----CCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEe
Q 016991           78 LAS-----RTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        78 ~~~-----~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                      +..     ...+|+||||+. |+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+
T Consensus        98 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~  176 (362)
T 3pg1_A           98 FVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC  176 (362)
T ss_dssp             EEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             EEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE
Confidence            843     347899999997 5788877654 479999999999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc-----
Q 016991          152 DFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE-----  226 (379)
Q Consensus       152 DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~-----  226 (379)
                      |||++...... ......+||+.|+|||++.+....+.++|||||||++|+|++|+.||.+.+.......+....     
T Consensus       177 Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  255 (362)
T 3pg1_A          177 DFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI  255 (362)
T ss_dssp             CTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             ecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence            99998754332 233456799999999999875555799999999999999999999999887665555442210     


Q ss_pred             -------------------c--------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          227 -------------------F--------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       227 -------------------~--------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                                         .        ..+...++.+.+||.+||+.||.+|||++++++||||+..+.+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~  326 (362)
T 3pg1_A          256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFDP  326 (362)
T ss_dssp             HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCCG
T ss_pred             HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccCc
Confidence                               0        1123468899999999999999999999999999999876544

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=4.2e-49  Score=380.33  Aligned_cols=253  Identities=23%  Similarity=0.392  Sum_probs=219.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-------CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-------ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEV   77 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~   77 (379)
                      ...++|++++.||+|+||.||+|.+.       .++..||||++....  .....+.+.+|+.+++.+ +||||++++++
T Consensus        78 ~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  155 (370)
T 2psq_A           78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGA  155 (370)
T ss_dssp             CCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEE
T ss_pred             ccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence            34578999999999999999999874       345689999997643  334567899999999999 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEE
Q 016991           78 LASRTKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLL  141 (379)
Q Consensus        78 ~~~~~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIl  141 (379)
                      +...+.+|+||||++||+|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||
T Consensus       156 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIl  235 (370)
T 2psq_A          156 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL  235 (370)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred             EccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEE
Confidence            999999999999999999999998653                4789999999999999999999999999999999999


Q ss_pred             EccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 016991          142 LDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTL  218 (379)
Q Consensus       142 l~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~  218 (379)
                      ++.++.+||+|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+....
T Consensus       236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~ellt~g~~p~~~~~~~~~  314 (370)
T 2psq_A          236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  314 (370)
T ss_dssp             ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCC-CcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence            9999999999999987554322  12234457789999999987766 589999999999999999 9999999888777


Q ss_pred             HHHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          219 YKKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       219 ~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...+.... ...|..+++++.++|.+||+.||.+|||+.+++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77766553 45677899999999999999999999999999874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=4.3e-50  Score=379.48  Aligned_cols=256  Identities=32%  Similarity=0.527  Sum_probs=222.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhCC--CCCcceEEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIVR--HPNIVRLHEVLA   79 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~--hp~Iv~l~~~~~   79 (379)
                      ....++|++++.||+|+||.||+|.+..+|+.||||++........   ...+.+.+|+.+++.++  ||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            4567899999999999999999999999999999999976543221   11244668999999996  599999999999


Q ss_pred             eCCeEEEEEeccCC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc-cCCCeEEeeecccc
Q 016991           80 SRTKVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSA  157 (379)
Q Consensus        80 ~~~~~~lv~E~~~g-g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~-~~~~lkl~DfGl~~  157 (379)
                      ..+..++|||++.+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~  198 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA  198 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence            99999999999976 89999999889999999999999999999999999999999999999999 78899999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhH
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  237 (379)
                      .....  .....+||+.|+|||++.+..+.+.++|||||||++|+|++|..||...+      .+.......+..+++++
T Consensus       199 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~~~~~~~~  270 (320)
T 3a99_A          199 LLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSEC  270 (320)
T ss_dssp             ECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCSSCCCHHH
T ss_pred             ccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhcccccccccCCHHH
Confidence            65432  23456799999999999887776788999999999999999999996532      23445566778899999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||.+||+.||.+|||++++++||||+...
T Consensus       271 ~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          271 QHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            9999999999999999999999999998643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.6e-49  Score=373.87  Aligned_cols=261  Identities=25%  Similarity=0.362  Sum_probs=202.8

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++++.||+|+||.||+|.+..++.   .||||++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   97 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEFDHPHVAKLVGVSLRS   97 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence            4456789999999999999999999887775   89999997654333 3457899999999999999999999999877


Q ss_pred             CeE------EEEEeccCCCChHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeE
Q 016991           82 TKV------YIILEFVTGGELFDKIVHQG------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLK  149 (379)
Q Consensus        82 ~~~------~lv~E~~~gg~L~~~l~~~~------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lk  149 (379)
                      ...      ++||||+++|+|.+++....      .+++..++.++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus        98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~k  177 (323)
T 3qup_A           98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC  177 (323)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred             ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEE
Confidence            655      99999999999999996543      699999999999999999999999999999999999999999999


Q ss_pred             EeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-
Q 016991          150 VSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-  225 (379)
Q Consensus       150 l~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-  225 (379)
                      |+|||++.......  .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... 
T Consensus       178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~  256 (323)
T 3qup_A          178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLY-TVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN  256 (323)
T ss_dssp             ECCCCC-----------------CCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred             EeeccccccccccccccccccccCcccccCchhhcCCCC-CCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence            99999987654322  12223456788999999987766 489999999999999999 99999998887777766554 


Q ss_pred             ccCCCCCCCHhHHHHHHHccCCCCCCCCC-------hHhHhcCcccccc
Q 016991          226 EFSCPFWFSTGATSLIHKILDPNPKTRIR-------IEGIRKHPWFRKN  267 (379)
Q Consensus       226 ~~~~p~~~s~~~~~li~~~L~~dP~~R~s-------~~~il~hp~f~~~  267 (379)
                      ....|..+++++.+||.+||+.||.+|||       ++++++|||+...
T Consensus       257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            45677789999999999999999999999       7888999999754

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=5.2e-49  Score=367.16  Aligned_cols=253  Identities=26%  Similarity=0.479  Sum_probs=208.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS------   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~------   80 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||||++...    ....+.+.+|+.+++.++||||+++++++..      
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK   79 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence            357899999999999999999999999999999998643    3345778999999999999999999998864      


Q ss_pred             -------CCeEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEee
Q 016991           81 -------RTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        81 -------~~~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                             .+..|+||||++|++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~d  159 (303)
T 1zy4_A           80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD  159 (303)
T ss_dssp             ------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred             hhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEee
Confidence                   467899999999999999998644 678899999999999999999999999999999999999999999999


Q ss_pred             eccccCCCCC--------------cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-ChHH
Q 016991          153 FGLSALPQQG--------------VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET-DLPT  217 (379)
Q Consensus       153 fGl~~~~~~~--------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~-~~~~  217 (379)
                      ||++......              .......+||+.|+|||++.+.+..+.++|||||||++|+|++   ||... +...
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~  236 (303)
T 1zy4_A          160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN  236 (303)
T ss_dssp             CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH
T ss_pred             CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH
Confidence            9998765421              1223456799999999999876555799999999999999998   55432 3334


Q ss_pred             HHHHHHhcccCCCC----CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          218 LYKKINAAEFSCPF----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       218 ~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ....+......+|.    ..++.+.++|.+||+.||.+|||++++++||||+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          237 ILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             HHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            45555555444443    45677999999999999999999999999999974

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=4.9e-49  Score=373.21  Aligned_cols=253  Identities=25%  Similarity=0.376  Sum_probs=218.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++.+.||+|+||.||+|.+..+|+   .||||++....  .....+.+.+|+.+++.++||||+++++++...
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  122 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG  122 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence            3456799999999999999999999986665   49999997543  333457789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +..|+||||++|++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  202 (325)
T 3kul_A          123 RLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE  202 (325)
T ss_dssp             GCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             CccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence            9999999999999999999654 589999999999999999999999999999999999999999999999999997654


Q ss_pred             CCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCH
Q 016991          161 QGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFST  235 (379)
Q Consensus       161 ~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~  235 (379)
                      ....   ......+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++
T Consensus       203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (325)
T 3kul_A          203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTF-SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH  281 (325)
T ss_dssp             ----CCEECC---CCGGGSCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCH
T ss_pred             cCccceeeccCCCCcccccCHhHhcCCCC-CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcCH
Confidence            4222   1223346778999999987666 489999999999999999 99999998888777776654 4566778999


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++.+||.+||+.||.+|||+.++++
T Consensus       282 ~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          282 ALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999999887

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=7.1e-49  Score=375.88  Aligned_cols=255  Identities=25%  Similarity=0.393  Sum_probs=213.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe---
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK---   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~---   83 (379)
                      ..++|.+.+.||+|+||.||+|.+..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+.   
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  100 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN  100 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence            3578999999999999999999999999999999997643 334456788999999999999999999999987654   


Q ss_pred             ---EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           84 ---VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        84 ---~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                         .|+||||+. ++|.+.+.  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus       101 ~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          101 FYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             ceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence               499999996 58877663  469999999999999999999999999999999999999999999999999987644


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------------  225 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------------  225 (379)
                      ..   ....+||+.|+|||++.+....+.++|||||||++|+|++|..||.+.+.......+...               
T Consensus       178 ~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  254 (353)
T 3coi_A          178 AE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDK  254 (353)
T ss_dssp             ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCH
T ss_pred             CC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhH
Confidence            32   345678999999999987455568999999999999999999999988765544443221               


Q ss_pred             -------------c---cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          226 -------------E---FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       226 -------------~---~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                   .   ...+..+++++.+||.+||+.||.+|||++++++||||+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          255 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence                         0   012345799999999999999999999999999999997543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=3.3e-50  Score=387.89  Aligned_cols=253  Identities=17%  Similarity=0.213  Sum_probs=195.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC--CCCCcceEE-------EEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV--RHPNIVRLH-------EVLA   79 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l--~hp~Iv~l~-------~~~~   79 (379)
                      .+|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+  +||||++++       +++.
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence            3599999999999999999999999999999999886654555667788886555444  699988755       5554


Q ss_pred             eC-----------------CeEEEEEeccCCCChHHHHHhcC-CCCHHHH------HHHHHHHHHHHHHHHHCCceeecC
Q 016991           80 SR-----------------TKVYIILEFVTGGELFDKIVHQG-RLLENDC------RRYFQQLIDAVAHCHSKGVYHRDL  135 (379)
Q Consensus        80 ~~-----------------~~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~------~~~~~qil~~l~ylH~~gi~HrDl  135 (379)
                      ..                 ..+|+||||++ |+|.+++...+ .+++...      ..++.||+.||+|||++||+||||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi  220 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF  220 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence            33                 34899999998 89999998643 3444444      566799999999999999999999


Q ss_pred             CCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          136 KPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       136 kp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                      ||+|||++.+|.+||+|||++......   .....||+.|+|||++.+  ..+ +.++|||||||++|+|++|+.||.+.
T Consensus       221 kp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~-~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          221 TPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATF-THALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             SGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEEC-CHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             CHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCc-CccccHHHHHHHHHHHHhCCCCCCCc
Confidence            999999999999999999999765432   224557799999999976  445 59999999999999999999999776


Q ss_pred             ChHH--HHHH-----HHhcccCC--CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          214 DLPT--LYKK-----INAAEFSC--PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       214 ~~~~--~~~~-----i~~~~~~~--p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ....  .+..     .....+.+  +..+++++.+||.+||+.||++|||+.++++||||+.
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             CTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             CcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            4321  1100     11112222  3468999999999999999999999999999999974

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.8e-49  Score=362.56  Aligned_cols=249  Identities=23%  Similarity=0.371  Sum_probs=218.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|++......    .+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             ChhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEE
Confidence            4579999999999999999999987 5778999999765432    2568899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-c
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-E  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~  164 (379)
                      ||||+++++|.+++... +.+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++....... .
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  162 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  162 (269)
T ss_dssp             EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             EEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence            99999999999999654 468999999999999999999999999999999999999999999999999987654421 2


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                      ......||+.|+|||++.+..+ +.++||||+|+++|+|++ |..||...+.......+... ....|...++++.++|.
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  241 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN  241 (269)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred             cccCcccccccCCHHHhcCCCC-CchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCCCcCCHHHHHHHH
Confidence            2334557788999999987766 489999999999999999 99999998888877777665 45567778999999999


Q ss_pred             HccCCCCCCCCChHhHhcC
Q 016991          243 KILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~h  261 (379)
                      +||+.||.+|||+.++++|
T Consensus       242 ~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          242 HCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCcccCcCHHHHHHH
Confidence            9999999999999999985

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=6.8e-49  Score=365.74  Aligned_cols=257  Identities=26%  Similarity=0.399  Sum_probs=214.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|.....||+|+||.||+|.+..++..||||++....   ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   97 (295)
T 2clq_A           21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF   97 (295)
T ss_dssp             BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence            444555569999999999999999999999999987643   23446789999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-CCCeEEeeeccccCCCCCc
Q 016991           88 LEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-~~~lkl~DfGl~~~~~~~~  163 (379)
                      |||+++++|.+++....   .+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.......
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A           98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            99999999999997652   4678899999999999999999999999999999999987 8999999999987655433


Q ss_pred             ccccccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChHH--HHH-HHHhcccCCCCCCCHhHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETDLPT--LYK-KINAAEFSCPFWFSTGATS  239 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~--~~~-~i~~~~~~~p~~~s~~~~~  239 (379)
                      .......|++.|+|||++.+.. ..+.++||||||+++|+|++|..||...+...  ... .........|..+++++.+
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKA  257 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHH
T ss_pred             CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHH
Confidence            3345667999999999996543 23589999999999999999999997644322  111 1223345667789999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||.+||+.||.+|||++++++||||+..
T Consensus       258 li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          258 FILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             HHHHHccCChhhCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.8e-50  Score=375.68  Aligned_cols=256  Identities=32%  Similarity=0.563  Sum_probs=213.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhC----CCCCcceEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIV----RHPNIVRLHEV   77 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l----~hp~Iv~l~~~   77 (379)
                      ....++|++++.||+|+||.||+|.+..+|+.||||++........   .....+.+|+.+++.+    +||||++++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~  106 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW  106 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence            4556799999999999999999999999999999999976543221   1223456799999888    89999999999


Q ss_pred             EEeCCeEEEEEec-cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc-cCCCeEEeeecc
Q 016991           78 LASRTKVYIILEF-VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGL  155 (379)
Q Consensus        78 ~~~~~~~~lv~E~-~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~-~~~~lkl~DfGl  155 (379)
                      +...+..++|+|| +.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus       107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~  186 (312)
T 2iwi_A          107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS  186 (312)
T ss_dssp             C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSS
T ss_pred             EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcch
Confidence            9999999999999 78999999999888999999999999999999999999999999999999999 889999999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCH
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFST  235 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~  235 (379)
                      +......  .....+|++.|+|||++.+..+.+.++|||||||++|+|++|+.||....      .+......+|..+++
T Consensus       187 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~~~~~~  258 (312)
T 2iwi_A          187 GALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFPAHVSP  258 (312)
T ss_dssp             CEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCCTTSCH
T ss_pred             hhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCcccCCH
Confidence            8765442  33456799999999999877776668999999999999999999996532      344556677888999


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      ++.+||.+||+.||.+|||++++++||||+...
T Consensus       259 ~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            999999999999999999999999999998643

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=6.3e-49  Score=380.52  Aligned_cols=256  Identities=29%  Similarity=0.404  Sum_probs=213.8

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CC-----CcceEEE
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HP-----NIVRLHE   76 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp-----~Iv~l~~   76 (379)
                      .+....++|++.+.||+|+||+||+|.+..+|+.||||++...    ......+.+|+.+++.++ |+     +|+++++
T Consensus        48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  123 (382)
T 2vx3_A           48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR  123 (382)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred             cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence            3456678999999999999999999999999999999999653    234567788999988875 44     4999999


Q ss_pred             EEEeCCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH--HCCceeecCCCCcEEEc--cCCCeEE
Q 016991           77 VLASRTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCH--SKGVYHRDLKPENLLLD--SYGNLKV  150 (379)
Q Consensus        77 ~~~~~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH--~~gi~HrDlkp~NIll~--~~~~lkl  150 (379)
                      ++...+..|+||||+. ++|.+++...  +.+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+||
T Consensus       124 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL  202 (382)
T 2vx3_A          124 HFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKI  202 (382)
T ss_dssp             EEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEE
T ss_pred             eeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEE
Confidence            9999999999999995 5999999875  46999999999999999999999  57999999999999994  4778999


Q ss_pred             eeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC-
Q 016991          151 SDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-  229 (379)
Q Consensus       151 ~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-  229 (379)
                      +|||++.....   .....+||+.|+|||++.+..+ +.++|||||||++|+|++|++||.+.+.......+....... 
T Consensus       203 ~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~  278 (382)
T 2vx3_A          203 VDFGSSCQLGQ---RIYQYIQSRFYRSPEVLLGMPY-DLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPP  278 (382)
T ss_dssp             CCCTTCEETTC---CCCSSCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCC
T ss_pred             EeccCceeccc---ccccccCCccccChHHHcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            99999976543   2346789999999999988776 499999999999999999999999887766655543211000 


Q ss_pred             ------------------------------------CCC---------------------------CCHhHHHHHHHccC
Q 016991          230 ------------------------------------PFW---------------------------FSTGATSLIHKILD  246 (379)
Q Consensus       230 ------------------------------------p~~---------------------------~s~~~~~li~~~L~  246 (379)
                                                          |..                           .++++.+||.+||+
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~  358 (382)
T 2vx3_A          279 AHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLD  358 (382)
T ss_dssp             HHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTC
T ss_pred             HHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcC
Confidence                                                000                           01378999999999


Q ss_pred             CCCCCCCChHhHhcCcccccc
Q 016991          247 PNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .||++|||++|+++||||+..
T Consensus       359 ~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          359 YDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             SCTTTSCCHHHHTTSGGGCC-
T ss_pred             CChhhCCCHHHHhcCcccccC
Confidence            999999999999999999754

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-49  Score=382.68  Aligned_cols=257  Identities=21%  Similarity=0.275  Sum_probs=220.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEE-----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~-----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|++++.||+|+||+||+|.     +..++..||||++....  .......+.+|+.+++.++||||+++++++..
T Consensus        68 ~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQ  145 (367)
T ss_dssp             CCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            345789999999999999999999     45678899999986432  33344678899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC---CeEE
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQG-------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG---NLKV  150 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~-------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~---~lkl  150 (379)
                      ....|+||||++||+|.+++....       .+++..++.++.||+.||.|||++||+||||||+|||++.+|   .+||
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEE
Confidence            999999999999999999998653       589999999999999999999999999999999999999655   4999


Q ss_pred             eeeccccCCCC--CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-
Q 016991          151 SDFGLSALPQQ--GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-  226 (379)
Q Consensus       151 ~DfGl~~~~~~--~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-  226 (379)
                      +|||++.....  ........+||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.... 
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~  304 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR  304 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHHhcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999864322  1122345568999999999987766 489999999999999998 999999988888877776654 


Q ss_pred             cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          227 FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       227 ~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      ...|..+++++.+||.+||+.||.+|||+.+++++.|+.
T Consensus       305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            556778999999999999999999999999999998764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1.8e-48  Score=368.17  Aligned_cols=256  Identities=30%  Similarity=0.400  Sum_probs=214.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEEC-CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceEEEEEE----
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNR-ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVRLHEVLA----   79 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l---~hp~Iv~l~~~~~----   79 (379)
                      .++|++.+.||+|+||.||+|.+. .+|+.||+|++....... .....+.+|+.+++.+   +||||+++++++.    
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence            479999999999999999999995 678999999997643221 1123455777777665   8999999999987    


Q ss_pred             -eCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           80 -SRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        80 -~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                       .....++||||+. |+|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~  167 (326)
T 1blx_A           89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  167 (326)
T ss_dssp             SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence             5678999999997 69999997753  4999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc----------
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE----------  226 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~----------  226 (379)
                      ...... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.......+....          
T Consensus       168 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  245 (326)
T 1blx_A          168 RIYSFQ-MALTSVVVTLWYRAPEVLLQSSY-ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  245 (326)
T ss_dssp             CCCCGG-GGGCCCCCCCTTCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             ccccCC-CCccccccccceeCHHHHhcCCC-CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCcc
Confidence            765432 23446679999999999987665 589999999999999999999999887766655543210          


Q ss_pred             -----------------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 -----------------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 -----------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                       ..++..+++.+.+||.+||+.||.+|||+.++++||||+..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  303 (326)
T 1blx_A          246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  303 (326)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             ccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcccccc
Confidence                             01234578999999999999999999999999999999754

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-48  Score=368.04  Aligned_cols=256  Identities=22%  Similarity=0.357  Sum_probs=211.9

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .+..+++|++.+.||+|+||.||+|.+..+++.||||++...........+.+.+|+.+++.++||||+++++++...+.
T Consensus        29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred             CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCe
Confidence            45678999999999999999999999999999999999987655555566889999999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      .|+||||++|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  188 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK  188 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred             EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence            99999999999999999988899999999999999999999999999999999999999999999999999987654321


Q ss_pred             -ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc---CCCCCCCHhHHH
Q 016991          164 -ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF---SCPFWFSTGATS  239 (379)
Q Consensus       164 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~---~~p~~~s~~~~~  239 (379)
                       ......+|++.|+|||++.+..+ +.++||||||+++|+|++|..||.+.+.......+.....   ..+..+++++.+
T Consensus       189 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  267 (309)
T 2h34_A          189 LTQLGNTVGTLYYMAPERFSESHA-TYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDA  267 (309)
T ss_dssp             --------CCGGGCCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHH
T ss_pred             cccccccCCCcCccCHHHHcCCCC-CchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHH
Confidence             23345679999999999977655 5899999999999999999999988776655554443322   345678999999


Q ss_pred             HHHHccCCCCCCCC-ChHhHhc
Q 016991          240 LIHKILDPNPKTRI-RIEGIRK  260 (379)
Q Consensus       240 li~~~L~~dP~~R~-s~~~il~  260 (379)
                      +|.+||+.||.+|| +++++++
T Consensus       268 li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          268 VIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHhccCCHHHHHHhHHHHHH
Confidence            99999999999999 7888765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=9.9e-49  Score=373.60  Aligned_cols=255  Identities=25%  Similarity=0.417  Sum_probs=213.4

Q ss_pred             ccceeccCeeeeeeecccCCeEEEEEEECCCC-cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC------cceEE
Q 016991            3 KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETG-ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN------IVRLH   75 (379)
Q Consensus         3 ~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~-~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~------Iv~l~   75 (379)
                      .+....++|++.+.||+|+||+||+|.+..++ ..||+|++...    ....+.+.+|+.+++.++|++      ++.++
T Consensus        13 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             TTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             cCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            34567789999999999999999999998877 69999998653    234467888999999987665      99999


Q ss_pred             EEEEeCCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE-----------
Q 016991           76 EVLASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL-----------  142 (379)
Q Consensus        76 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll-----------  142 (379)
                      +++...+..|+||||+ +++|.+.+....  .+++.+++.++.||+.||.|||++||+||||||+|||+           
T Consensus        89 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~  167 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNE  167 (355)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECC
T ss_pred             eeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccc
Confidence            9999999999999999 777888777653  69999999999999999999999999999999999999           


Q ss_pred             --------ccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC
Q 016991          143 --------DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD  214 (379)
Q Consensus       143 --------~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~  214 (379)
                              +.++.+||+|||++......   ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+
T Consensus       168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~~  243 (355)
T 2eu9_A          168 HKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGW-AQPCDVWSIGCILFEYYRGFTLFQTHE  243 (355)
T ss_dssp             C-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCC-CCccchHHHHHHHHHHHhCCCCCCCCC
Confidence                    66789999999998754432   345679999999999987766 489999999999999999999998877


Q ss_pred             hHHHHHHHHhcccCCC--------------------------------------------CCCCHhHHHHHHHccCCCCC
Q 016991          215 LPTLYKKINAAEFSCP--------------------------------------------FWFSTGATSLIHKILDPNPK  250 (379)
Q Consensus       215 ~~~~~~~i~~~~~~~p--------------------------------------------~~~s~~~~~li~~~L~~dP~  250 (379)
                      .......+.......|                                            ...++++.+||.+||+.||+
T Consensus       244 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~  323 (355)
T 2eu9_A          244 NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPA  323 (355)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTT
T ss_pred             HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChh
Confidence            6554433322111111                                            11245788999999999999


Q ss_pred             CCCChHhHhcCccccc
Q 016991          251 TRIRIEGIRKHPWFRK  266 (379)
Q Consensus       251 ~R~s~~~il~hp~f~~  266 (379)
                      +|||++++++||||+.
T Consensus       324 ~Rpt~~e~l~hp~f~~  339 (355)
T 2eu9_A          324 QRITLAEALLHPFFAG  339 (355)
T ss_dssp             TSCCHHHHTTSGGGGG
T ss_pred             hCcCHHHHhcChhhcC
Confidence            9999999999999975

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.6e-48  Score=358.73  Aligned_cols=251  Identities=22%  Similarity=0.357  Sum_probs=218.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+. ++..||+|++......    .+.+.+|+.+++.++||||+++++++......
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence            345689999999999999999999886 5778999999765432    25688999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||++|++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             EEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            99999999999999997754 59999999999999999999999999999999999999999999999999987654422


Q ss_pred             -ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHH
Q 016991          164 -ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSL  240 (379)
Q Consensus       164 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~l  240 (379)
                       .......||+.|+|||++.+..+ +.++||||+|+++|+|++ |..||...+.......+.... ...|...++++.++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  237 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKY-SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQI  237 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEE-ETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSCHHHHHH
T ss_pred             hhcccCCCcCcccCCHHHHhccCC-chhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcChHHHHHH
Confidence             22234456778999999987666 489999999999999998 999999888877776665554 45567789999999


Q ss_pred             HHHccCCCCCCCCChHhHhcC
Q 016991          241 IHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~h  261 (379)
                      |.+||+.||.+|||+.+++++
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          238 MYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=3e-49  Score=376.38  Aligned_cols=255  Identities=32%  Similarity=0.573  Sum_probs=186.3

Q ss_pred             cceeccCeeeee-eecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--
Q 016991            4 QTRRVAKYEVGR-TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--   80 (379)
Q Consensus         4 ~~~~~~~y~~~~-~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--   80 (379)
                      .....++|++.+ .||+|+||+||+|.+..+|+.||||++....       ....+....++.++||||+++++++..  
T Consensus        23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~   95 (336)
T 3fhr_A           23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMH   95 (336)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhcc
Confidence            345678999965 6999999999999999999999999986532       112223334677899999999999876  


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeEEeee
Q 016991           81 --RTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDF  153 (379)
Q Consensus        81 --~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lkl~Df  153 (379)
                        ....|+||||++||+|.+++...+  .+++.+++.++.||+.||.|||++||+||||||+|||++.+   +.+||+||
T Consensus        96 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Df  175 (336)
T 3fhr_A           96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDF  175 (336)
T ss_dssp             TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred             CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecc
Confidence              556899999999999999998754  69999999999999999999999999999999999999864   45999999


Q ss_pred             ccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH----HHHHHhcccCC
Q 016991          154 GLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL----YKKINAAEFSC  229 (379)
Q Consensus       154 Gl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~----~~~i~~~~~~~  229 (379)
                      |++.....  ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+....    ...+.......
T Consensus       176 g~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  252 (336)
T 3fhr_A          176 GFAKETTQ--NALQTPCYTPYYVAPEVLGPEKY-DKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGF  252 (336)
T ss_dssp             TTCEEC------------------------CHH-HHHHHHHHHHHHHHHHHHSSCCC---------------------CC
T ss_pred             ccceeccc--cccccCCCCcCccChhhhCCCCC-CchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccccc
Confidence            99875443  23456789999999999976655 4899999999999999999999976654332    22333333333


Q ss_pred             C----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          230 P----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       230 p----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      |    ..+++++.+||.+||+.||.+|||++++++||||+...
T Consensus       253 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  295 (336)
T 3fhr_A          253 PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSM  295 (336)
T ss_dssp             CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGG
T ss_pred             CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccc
Confidence            3    35899999999999999999999999999999998654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5.6e-49  Score=376.78  Aligned_cols=253  Identities=23%  Similarity=0.363  Sum_probs=214.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEE-----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLA   79 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~-----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~   79 (379)
                      ...++|++++.||+|+||.||+|.     +..+++.||||++....  .....+.+.+|+.+++.+ +||||+++++++.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~   96 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT   96 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeee
Confidence            346799999999999999999999     56677999999997543  233457789999999999 7899999999998


Q ss_pred             eCC-eEEEEEeccCCCChHHHHHhcCC-----------------------------------------------------
Q 016991           80 SRT-KVYIILEFVTGGELFDKIVHQGR-----------------------------------------------------  105 (379)
Q Consensus        80 ~~~-~~~lv~E~~~gg~L~~~l~~~~~-----------------------------------------------------  105 (379)
                      ..+ ..++||||++||+|.+++.....                                                     
T Consensus        97 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (359)
T 3vhe_A           97 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDV  176 (359)
T ss_dssp             STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------------
T ss_pred             cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchh
Confidence            754 49999999999999999976543                                                     


Q ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc--ccccccc
Q 016991          106 -------------LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTC  170 (379)
Q Consensus       106 -------------l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~--~~~~~~~  170 (379)
                                   +++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .......
T Consensus       177 ~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  256 (359)
T 3vhe_A          177 EEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR  256 (359)
T ss_dssp             -------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred             hhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence                         8999999999999999999999999999999999999999999999999997654322  2334567


Q ss_pred             cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHH-HHHHHHh-cccCCCCCCCHhHHHHHHHccCC
Q 016991          171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT-LYKKINA-AEFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       171 gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~-~~~~i~~-~~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      ||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+... ....+.. .....|..+++++.++|.+||+.
T Consensus       257 ~t~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  335 (359)
T 3vhe_A          257 LPLKWMAPETIFDRVY-TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG  335 (359)
T ss_dssp             ECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCceeEChhhhcCCCC-CchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccC
Confidence            8999999999987766 489999999999999998 999998876443 3333333 34567788999999999999999


Q ss_pred             CCCCCCChHhHhcC
Q 016991          248 NPKTRIRIEGIRKH  261 (379)
Q Consensus       248 dP~~R~s~~~il~h  261 (379)
                      ||.+|||+.++++|
T Consensus       336 dP~~Rps~~ell~~  349 (359)
T 3vhe_A          336 EPSQRPTFSELVEH  349 (359)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCCCHHHHHHH
Confidence            99999999999986

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.8e-48  Score=361.23  Aligned_cols=250  Identities=22%  Similarity=0.358  Sum_probs=216.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++++.||+|+||.||+|.+. ++..||||++......    .+.+.+|+.+++.++||||+++++++.+.+..|
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   95 (283)
T 3gen_A           21 IDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF   95 (283)
T ss_dssp             CCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             CCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeE
Confidence            44569999999999999999999886 6778999999765432    256889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      +||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  175 (283)
T 3gen_A           96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  175 (283)
T ss_dssp             EEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred             EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence            99999999999999976 5679999999999999999999999999999999999999999999999999987654421 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......||+.|+|||++.+..+ +.++||||+|+++|+|++ |..||...+.......+... ....|...++.+.++|
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  254 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKF-SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIM  254 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCC-SHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccccCCccCcccCCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcCCHHHHHHH
Confidence            12234456788999999987766 589999999999999998 99999998887777777655 3456677899999999


Q ss_pred             HHccCCCCCCCCChHhHhcC
Q 016991          242 HKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+||+.||.+|||+.++++|
T Consensus       255 ~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          255 YSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHHH
Confidence            99999999999999999986

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.2e-48  Score=367.32  Aligned_cols=253  Identities=24%  Similarity=0.336  Sum_probs=220.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|++++.||+|+||.||+|.+.     .++..||||++....  .....+.+.+|+.+++.++||||+++++++..
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   97 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ   97 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence            34579999999999999999999983     456899999997543  33455789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCC------------------------CCHHHHHHHHHHHHHHHHHHHHCCceeecCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGR------------------------LLENDCRRYFQQLIDAVAHCHSKGVYHRDLK  136 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~------------------------l~e~~~~~~~~qil~~l~ylH~~gi~HrDlk  136 (379)
                      .+..|+||||++|++|.+++.....                        +++..++.++.||+.||.|||++||+|||||
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  177 (314)
T 2ivs_A           98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA  177 (314)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence            9999999999999999999987543                        8899999999999999999999999999999


Q ss_pred             CCcEEEccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCC
Q 016991          137 PENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGET  213 (379)
Q Consensus       137 p~NIll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~  213 (379)
                      |+||+++.++.+||+|||++........  ......|++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.
T Consensus       178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY-TTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCc-CchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999875543222  2234457888999999987665 489999999999999999 99999988


Q ss_pred             ChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          214 DLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       214 ~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +.......+.... ...|..+++++.++|.+||+.||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          257 PPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             CGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            8877777766543 45677899999999999999999999999999875

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-48  Score=371.76  Aligned_cols=253  Identities=24%  Similarity=0.326  Sum_probs=219.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|++++.||+|+||.||+|.+.     .++..||||++....  .....+.+.+|+.+++.++||||+++++++..
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            45679999999999999999999987     456899999997543  33455789999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ------------------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLK  136 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~------------------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlk  136 (379)
                      .+..|+||||++||+|.+++...                        ..+++.+++.++.||+.||.|||++||+|||||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999999999999999999764                        578999999999999999999999999999999


Q ss_pred             CCcEEEccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCC
Q 016991          137 PENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGET  213 (379)
Q Consensus       137 p~NIll~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~  213 (379)
                      |+|||++.++.+||+|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.
T Consensus       202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~  280 (343)
T 1luf_A          202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY-TTESDVWAYGVVLWEIFSYGLQPYYGM  280 (343)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCc-CcccccHHHHHHHHHHHhcCCCcCCCC
Confidence            999999999999999999986543221  22234568899999999987766 489999999999999998 99999998


Q ss_pred             ChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          214 DLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       214 ~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +.......+.... ...|..+++++.+||.+||+.||.+|||+.+++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          281 AHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            8877777776654 35678899999999999999999999999999873

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.2e-48  Score=363.29  Aligned_cols=249  Identities=22%  Similarity=0.267  Sum_probs=213.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCC-------cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETG-------ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEV   77 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~-------~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~   77 (379)
                      ....++|++.+.||+|+||.||+|.+..++       ..||+|++....   ....+.+.+|+.+++.++||||++++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~   80 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGV   80 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            345689999999999999999999998877       479999986543   2345778999999999999999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC--------e
Q 016991           78 LASRTKVYIILEFVTGGELFDKIVHQGR-LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN--------L  148 (379)
Q Consensus        78 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~-l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~--------l  148 (379)
                      +...+..|+||||++|++|.+++...+. +++..++.++.||+.||.|||++||+||||||+|||++.++.        +
T Consensus        81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~  160 (289)
T 4fvq_A           81 CVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFI  160 (289)
T ss_dssp             ECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred             EEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccccee
Confidence            9999999999999999999999987654 999999999999999999999999999999999999998887        9


Q ss_pred             EEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhccc
Q 016991          149 KVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPTLYKKINAAEF  227 (379)
Q Consensus       149 kl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~~~~~~~i~~~~~  227 (379)
                      ||+|||++......    ....||+.|+|||++.+....+.++|||||||++|+|++| .+||...+.... ..+.....
T Consensus       161 kl~Dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-~~~~~~~~  235 (289)
T 4fvq_A          161 KLSDPGISITVLPK----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-LQFYEDRH  235 (289)
T ss_dssp             EECCCCSCTTTSCH----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHTTC
T ss_pred             eeccCcccccccCc----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH-HHHhhccC
Confidence            99999998654332    3456899999999998745456899999999999999995 556655554433 33444556


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..|...++++.+||.+||+.||.+|||++++++|
T Consensus       236 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          236 QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            6777789999999999999999999999999985

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-48  Score=374.09  Aligned_cols=253  Identities=23%  Similarity=0.387  Sum_probs=221.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCC-------CcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRET-------GESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEV   77 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~-------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~   77 (379)
                      ...++|++++.||+|+||.||+|.+..+       +..||||++....  .....+.+.+|+.+++.+ +||||++++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  143 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA  143 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence            4457999999999999999999997543       3589999997643  334557899999999999 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEE
Q 016991           78 LASRTKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLL  141 (379)
Q Consensus        78 ~~~~~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIl  141 (379)
                      +...+..|+||||++||+|.+++....                .+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  223 (382)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence            999999999999999999999998754                4999999999999999999999999999999999999


Q ss_pred             EccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 016991          142 LDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTL  218 (379)
Q Consensus       142 l~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~  218 (379)
                      ++.++.+||+|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+....
T Consensus       224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwslG~il~ellt~g~~p~~~~~~~~~  302 (382)
T 3tt0_A          224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY-THQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  302 (382)
T ss_dssp             ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999998654422  22334567889999999987665 589999999999999999 9999999888887


Q ss_pred             HHHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          219 YKKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       219 ~~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...+... ....|..+++++.+||.+||+.||.+|||+.+++++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          303 FKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7777655 455677899999999999999999999999999985

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.2e-48  Score=360.55  Aligned_cols=253  Identities=28%  Similarity=0.390  Sum_probs=207.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++++.||+|+||.||+|.+..+   +..||+|++....  .....+.+.+|+.+++.++||||+++++++. .
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   87 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E   87 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-c
Confidence            34567999999999999999999998754   4579999886532  3345577999999999999999999999985 4


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +..|+||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  167 (281)
T 1mp8_A           88 NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME  167 (281)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             CccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccC
Confidence            67899999999999999997654 69999999999999999999999999999999999999999999999999987654


Q ss_pred             CCc-ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhH
Q 016991          161 QGV-ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGA  237 (379)
Q Consensus       161 ~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~  237 (379)
                      ... .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++++
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l  246 (281)
T 1mp8_A          168 DSTYYKASKGKLPIKWMAPESINFRRF-TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTL  246 (281)
T ss_dssp             -----------CCGGGCCHHHHHHCCC-SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred             cccccccccCCCcccccChhhcccCCC-CCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence            422 12234457788999999987666 489999999999999996 99999988877777766554 356778899999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .++|.+||+.||.+|||+.+++++
T Consensus       247 ~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          247 YSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999998874

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.1e-48  Score=376.34  Aligned_cols=255  Identities=23%  Similarity=0.433  Sum_probs=209.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----------CCCcce
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-----------HPNIVR   73 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----------hp~Iv~   73 (379)
                      ....++|++++.||+|+||+||+|.+..+|+.||||++....    ...+.+.+|+.+++.++           ||||++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~   90 (373)
T 1q8y_A           15 PYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILK   90 (373)
T ss_dssp             EETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCC
T ss_pred             cccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHH
Confidence            345679999999999999999999999999999999987532    23466888999998886           899999


Q ss_pred             EEEEEEeCC----eEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEcc--
Q 016991           74 LHEVLASRT----KVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDS--  144 (379)
Q Consensus        74 l~~~~~~~~----~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~--  144 (379)
                      +++++...+    .+++||||+ |++|.+++...  ..+++..++.++.||+.||.|||++ ||+||||||+|||++.  
T Consensus        91 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~  169 (373)
T 1q8y_A           91 LLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVD  169 (373)
T ss_dssp             CCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEE
T ss_pred             HHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccC
Confidence            999987654    799999999 99999999763  4699999999999999999999998 9999999999999953  


Q ss_pred             ----CCCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-----
Q 016991          145 ----YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL-----  215 (379)
Q Consensus       145 ----~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-----  215 (379)
                          .+.+||+|||++.....   .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.     
T Consensus       170 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  245 (373)
T 1q8y_A          170 SPENLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLGAPW-GCGADIWSTACLIFELITGDFLFEPDEGHSYTK  245 (373)
T ss_dssp             TTTTEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHTCCC-CTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred             CCcCcceEEEcccccccccCC---CCCCCCCCccccCcHHHhCCCC-CchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence                34799999999876543   2345679999999999988766 5999999999999999999999976542     


Q ss_pred             -HHHHHHH------------------------------------------HhcccCCCCCCCHhHHHHHHHccCCCCCCC
Q 016991          216 -PTLYKKI------------------------------------------NAAEFSCPFWFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       216 -~~~~~~i------------------------------------------~~~~~~~p~~~s~~~~~li~~~L~~dP~~R  252 (379)
                       ......+                                          ....+.+|...++++.+||.+||+.||.+|
T Consensus       246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  325 (373)
T 1q8y_A          246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR  325 (373)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred             hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence             1111111                                          111223344457789999999999999999


Q ss_pred             CChHhHhcCccccccC
Q 016991          253 IRIEGIRKHPWFRKNY  268 (379)
Q Consensus       253 ~s~~~il~hp~f~~~~  268 (379)
                      ||++++++||||+...
T Consensus       326 pt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          326 ADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             BCHHHHHTCGGGTTCT
T ss_pred             CCHHHHhhChhhhccc
Confidence            9999999999998654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=9.6e-48  Score=361.09  Aligned_cols=256  Identities=28%  Similarity=0.514  Sum_probs=207.4

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...+++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.++||||+++++++...+..
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcE
Confidence            34678999999999999999999999999999999999765555555667899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           85 YIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      |+||||+++++|.+++..    ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++....
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999998864    4568999999999999999999999999999999999999999999999999987655


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHhcccC--CCCCCCHh
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKINAAEFS--CPFWFSTG  236 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~--~~~~~~~i~~~~~~--~p~~~s~~  236 (379)
                      ..........|++.|+|||++.+..+ +.++||||||+++|+|++|..||.+..  .......+....+.  .+..++++
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGY-NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE  266 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHH
T ss_pred             CCCccccccCCCeeEeChHHhCCCCC-CchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHH
Confidence            44344456679999999999987665 489999999999999999999997643  33444555544432  22568999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcC
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +.+||.+||+.||.+|||+.+++++
T Consensus       267 l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          267 LRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHH
Confidence            9999999999999999999999873

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.3e-48  Score=377.83  Aligned_cols=251  Identities=27%  Similarity=0.409  Sum_probs=217.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+..+|..||||++....  .....+.+.+|+.+|+.++||||+++++++...+..|+
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence            3568999999999999999999999999999999986532  23344678899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           87 ILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      ||||++||+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence            999999999999997654 6999999999999999999999999999999999999999999999999998754432111


Q ss_pred             --ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          166 --LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       166 --~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                        .....+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++++.+||
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  348 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNYGRY-SSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM  348 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ecCCCCCCCcCcCCHhHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence              112235678999999987665 489999999999999998 99999988877776666544 4567788999999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||.+|||++++++
T Consensus       349 ~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          349 EQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCCchhCcCHHHHHH
Confidence            9999999999999999876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=3.9e-48  Score=359.58  Aligned_cols=251  Identities=26%  Similarity=0.374  Sum_probs=222.1

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++.+.||+|+||.||+|.+..++..||+|++....    ...+.+.+|+.+++.++||||+++++++...+..
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence            456678999999999999999999999999999999986543    2346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      |+||||++|++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  164 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD  164 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence            9999999999999999864  45899999999999999999999999999999999999999999999999999766543


Q ss_pred             c-ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHH
Q 016991          163 V-ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATS  239 (379)
Q Consensus       163 ~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~  239 (379)
                      . .......|++.|+|||++.+..+ +.++||||||+++|+|++ |..||.+.+.......+... ....|..+++++.+
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  243 (288)
T 3kfa_A          165 TYTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE  243 (288)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             ccccccCCccccCcCChhhhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCCCHHHHH
Confidence            2 22334567889999999987766 489999999999999999 99999988887777766554 45667789999999


Q ss_pred             HHHHccCCCCCCCCChHhHhc
Q 016991          240 LIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~  260 (379)
                      ||.+||..||.+|||++++++
T Consensus       244 li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          244 LMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHhCCChhhCcCHHHHHH
Confidence            999999999999999999987

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=5.6e-48  Score=354.71  Aligned_cols=251  Identities=18%  Similarity=0.277  Sum_probs=217.7

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      +......++|++.+.||+|+||.||+|.+.  |..||||++..... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus         3 ~~~~i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   79 (271)
T 3kmu_A            3 KHSGIDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGACQSP   79 (271)
T ss_dssp             -CCCCCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT
T ss_pred             CcCCCCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCchhheEEEEccC
Confidence            345677899999999999999999999985  88999999976543 333457799999999999999999999999877


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEccCCCeEEeeecc
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                        ...++||||++||+|.+++....  .+++..+..++.||+.||.|||++|  |+||||||+||+++.++.++|+|||+
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~  159 (271)
T 3kmu_A           80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV  159 (271)
T ss_dssp             TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGS
T ss_pred             CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccc
Confidence              78999999999999999998765  4899999999999999999999999  99999999999999999999999998


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCC--CchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--ccCCCC
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG--SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPF  231 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~--~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~--~~~~p~  231 (379)
                      +.....     ...+||+.|+|||++.+..+..  .++|||||||++|+|++|..||.+.+.......+...  ....|.
T Consensus       160 ~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  234 (271)
T 3kmu_A          160 KFSFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP  234 (271)
T ss_dssp             CCTTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCT
T ss_pred             eeeecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCC
Confidence            754322     3457899999999998755442  2799999999999999999999988877666555443  345677


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+++++.++|.+||+.||.+|||++++++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          235 GISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            89999999999999999999999999986

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=7.3e-48  Score=354.63  Aligned_cols=250  Identities=25%  Similarity=0.427  Sum_probs=204.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK-HRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...++|++.+.||+|+||.||+|.+.  |+.||||++....... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (271)
T 3dtc_A            4 IDFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL   81 (271)
T ss_dssp             CCTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred             cchhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence            34689999999999999999999985  8899999987643322 23356789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeecCCCCcEEEcc--------CCCeEEeee
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG---VYHRDLKPENLLLDS--------YGNLKVSDF  153 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~g---i~HrDlkp~NIll~~--------~~~lkl~Df  153 (379)
                      |+||||++|++|.+++. .+++++..++.++.|++.||.|||++|   |+||||||+||+++.        ++.+||+||
T Consensus        82 ~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           82 CLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence            99999999999988875 468999999999999999999999999   999999999999986        678999999


Q ss_pred             ccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--cCCCC
Q 016991          154 GLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPF  231 (379)
Q Consensus       154 Gl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--~~~p~  231 (379)
                      |++......  ......||+.|+|||++.+..+ +.++||||||+++|+|++|..||.+.+.......+....  ...|.
T Consensus       161 g~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  237 (271)
T 3dtc_A          161 GLAREWHRT--TKMSAAGAYAWMAPEVIRASMF-SKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS  237 (271)
T ss_dssp             CC---------------CCGGGSCHHHHHHCCC-SHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCT
T ss_pred             Ccccccccc--cccCCCCccceeCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCc
Confidence            998755432  2235679999999999987665 589999999999999999999999888766665554443  45667


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+++++.++|.+||+.||.+|||+.+++++
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          238 TCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            889999999999999999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.5e-48  Score=368.12  Aligned_cols=253  Identities=21%  Similarity=0.321  Sum_probs=213.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcE----EEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~----vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ....++|++.+.||+|+||+||+|.+..+|+.    ||+|.+.....  ......+.+|+.+++.++||||+++++++..
T Consensus         9 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~   86 (325)
T 3kex_A            9 IFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG   86 (325)
T ss_dssp             BCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTCCCTTBCCEEEEECB
T ss_pred             hcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence            34567999999999999999999999988886    66666643321  1122456789999999999999999998864


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                       +..++||||+.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++++||+|||++...
T Consensus        87 -~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~  165 (325)
T 3kex_A           87 -SSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL  165 (325)
T ss_dssp             -SSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred             -CccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccccc
Confidence             5689999999999999999764 57999999999999999999999999999999999999999999999999999865


Q ss_pred             CCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCH
Q 016991          160 QQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFST  235 (379)
Q Consensus       160 ~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~  235 (379)
                      ....  .......|++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (325)
T 3kex_A          166 PPDDKQLLYSEAKTPIKWMALESIHFGKY-THQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI  244 (325)
T ss_dssp             CCCTTCCC-----CCTTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCTTBCT
T ss_pred             CcccccccccCCCCcccccChHHhccCCC-ChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCCcCcH
Confidence            4422  22345568889999999987666 589999999999999999 99999988877777766655 4566778899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.++|.+||+.||.+|||+.+++++
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          245 DVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999999986

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=4.6e-48  Score=360.70  Aligned_cols=253  Identities=25%  Similarity=0.379  Sum_probs=208.9

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      .....++|++++.||+|+||+||+|+    +..+|+.||||++...   .....+.+.+|+.+++.++||||+++++++.
T Consensus         5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~   81 (295)
T 3ugc_A            5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY   81 (295)
T ss_dssp             -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            45567899999999999999999998    6678999999998653   3344577899999999999999999999985


Q ss_pred             e--CCeEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           80 S--RTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        80 ~--~~~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      .  ...+|+||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            4  456899999999999999997754 5999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH----------------H
Q 016991          157 ALPQQGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP----------------T  217 (379)
Q Consensus       157 ~~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----------------~  217 (379)
                      ........   ......|++.|+|||++.+..+ +.++||||+||++|+|++|..||......                .
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcCCCC-ChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence            86544221   2233457778999999987776 48999999999999999999998653221                1


Q ss_pred             HHHHH-HhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          218 LYKKI-NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       218 ~~~~i-~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ....+ .......|..+++++.+||.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          241 LIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            11122 22345667789999999999999999999999999886

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.1e-48  Score=369.28  Aligned_cols=247  Identities=22%  Similarity=0.280  Sum_probs=209.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~   85 (379)
                      .-++|++.+.||+|+||.||+|.+..+|+.||||++.....     .+.+.+|+.+++.+ +||||+++++++...+..|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence            34689999999999999999999999999999999875432     13578999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC-----eEEeeeccccCC
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN-----LKVSDFGLSALP  159 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~-----lkl~DfGl~~~~  159 (379)
                      +||||+ |++|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++.     +||+|||++...
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            999999 9999999986 468999999999999999999999999999999999999998887     999999999764


Q ss_pred             CCCcc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhcccCC
Q 016991          160 QQGVE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD---LPTLYKKINAAEFSC  229 (379)
Q Consensus       160 ~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---~~~~~~~i~~~~~~~  229 (379)
                      .....       .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+   ....+..+.......
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~  239 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQ-SRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT  239 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcCCCC-CchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence            43211       1246789999999999988766 589999999999999999999998743   344455554443333


Q ss_pred             CCC----CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          230 PFW----FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       230 p~~----~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      |..    ..+++.++|.+||+.||.+||++++|++
T Consensus       240 ~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          240 PIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             CHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             CHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            321    1339999999999999999999998876

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.7e-47  Score=360.13  Aligned_cols=258  Identities=26%  Similarity=0.375  Sum_probs=198.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||.||+|.+..+|+.||||++...... ....+.+.++..+++.++||||+++++++...+..|
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            4578999999999999999999999999999999999765422 223344555666788899999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +||||+ ++.+...... .+.+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+||+|||++...... 
T Consensus       101 lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~-  178 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD-  178 (318)
T ss_dssp             EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC-
Confidence            999999 5555554443 46899999999999999999999995 9999999999999999999999999998655432 


Q ss_pred             ccccccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhcc-cCCC--CCCCH
Q 016991          164 ELLHTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGET-DLPTLYKKINAAE-FSCP--FWFST  235 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~~-~~~p--~~~s~  235 (379)
                      ......+||+.|+|||++..    ....+.++|||||||++|+|++|..||... +.......+.... ...|  ..+++
T Consensus       179 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (318)
T 2dyl_A          179 KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSG  258 (318)
T ss_dssp             --------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCH
T ss_pred             ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCH
Confidence            22345679999999999952    233458999999999999999999999874 3344444444433 2233  34799


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++.+||.+||+.||.+|||++++++||||+.
T Consensus       259 ~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          259 DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            9999999999999999999999999999975

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.3e-47  Score=360.94  Aligned_cols=261  Identities=25%  Similarity=0.416  Sum_probs=212.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC--CCCcceEEEEEEeCCe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR--HPNIVRLHEVLASRTK   83 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--hp~Iv~l~~~~~~~~~   83 (379)
                      ..-++|++.+.||+|+||.||+|.+. +|+.||||++..... .....+.+.+|+.+++.++  ||||+++++++...+.
T Consensus        25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~  102 (313)
T 3cek_A           25 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY  102 (313)
T ss_dssp             ETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred             eccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence            34457999999999999999999986 589999999976543 3345678899999999997  5999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      .|+||| +.+++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+++ +.+||+|||++.......
T Consensus       103 ~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~  180 (313)
T 3cek_A          103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT  180 (313)
T ss_dssp             EEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC-----
T ss_pred             EEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCcc
Confidence            999999 558899999999889999999999999999999999999999999999999965 899999999997654422


Q ss_pred             c--cccccccCCCCCchhhhccC----------CCCCCchhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHh--cccC
Q 016991          164 E--LLHTTCGTPNYVAPEVLSNR----------GYDGSAADVWSCGVILFVLMAGYLPFGETDL-PTLYKKINA--AEFS  228 (379)
Q Consensus       164 ~--~~~~~~gt~~y~aPE~l~~~----------~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-~~~~~~i~~--~~~~  228 (379)
                      .  .....+||+.|+|||++.+.          ...+.++|||||||++|+|++|..||..... ......+..  ....
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  260 (313)
T 3cek_A          181 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE  260 (313)
T ss_dssp             ---------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred             ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccC
Confidence            1  23456799999999998652          2345799999999999999999999976543 233333332  2345


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      +|...++++.+||.+||+.||.+|||++++++||||+....+
T Consensus       261 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~~  302 (313)
T 3cek_A          261 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHP  302 (313)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC---
T ss_pred             CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCCCc
Confidence            677789999999999999999999999999999999865433

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.3e-47  Score=357.49  Aligned_cols=250  Identities=20%  Similarity=0.276  Sum_probs=212.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~   82 (379)
                      +...-++|++++.||+|+||.||+|.+..+|+.||||++.....     .+.+.+|+.+++.+ +|+||+++++++....
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~   79 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGL   79 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETT
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc-----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCc
Confidence            44556789999999999999999999999999999999865432     24577899999999 7999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC-----eEEeeeccc
Q 016991           83 KVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN-----LKVSDFGLS  156 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~-----lkl~DfGl~  156 (379)
                      ..|+||||+ |++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.     +||+|||++
T Consensus        80 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~  158 (298)
T 1csn_A           80 HNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  158 (298)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             eeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence            999999999 999999998754 6999999999999999999999999999999999999987776     999999998


Q ss_pred             cCCCCCcc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhcc
Q 016991          157 ALPQQGVE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD---LPTLYKKINAAE  226 (379)
Q Consensus       157 ~~~~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---~~~~~~~i~~~~  226 (379)
                      ........       .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+   .......+....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  237 (298)
T 1csn_A          159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ-SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK  237 (298)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH
T ss_pred             cccccccccccccccCccCCCCCcccCCchhhcCCCC-ChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc
Confidence            76544211       2345679999999999987666 589999999999999999999998743   334444443322


Q ss_pred             cC-----CCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          227 FS-----CPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       227 ~~-----~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..     .+..+++++.++|.+||+.||.+|||++++++
T Consensus       238 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          238 QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            21     23468999999999999999999999999887

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-47  Score=352.49  Aligned_cols=249  Identities=23%  Similarity=0.367  Sum_probs=218.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+. +++.||+|++......    .+.+.+|+.+++.++||||+++++++...+..|+
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             chhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEE
Confidence            4578999999999999999999987 6789999999765432    2578899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-c
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-E  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~  164 (379)
                      ||||++|++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....... .
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             EECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             EEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence            99999999999999765 568999999999999999999999999999999999999999999999999987654321 1


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                      ......|++.|+|||++.+..+ +.++||||+|+++|+|++ |..||...+.......+... ....|...++++.++|.
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~  239 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFSFSRY-SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMN  239 (267)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHH
T ss_pred             ccccccccccccChhhhcCCCc-cchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCCccCcHHHHHHHH
Confidence            2234557788999999987666 589999999999999999 99999998887777777655 34556778999999999


Q ss_pred             HccCCCCCCCCChHhHhcC
Q 016991          243 KILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~h  261 (379)
                      +||+.||.+|||+.+++++
T Consensus       240 ~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          240 HCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCChhhCcCHHHHHHH
Confidence            9999999999999999874

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=5.4e-48  Score=366.17  Aligned_cols=252  Identities=21%  Similarity=0.320  Sum_probs=209.0

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEE----EEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~v----aiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ...++|++.+.||+|+||+||+|.+..+|+.+    |+|.+....  .....+.+.+|+.+++.++||||+++++++...
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   89 (327)
T 3poz_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS
T ss_pred             cCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence            44678999999999999999999998888765    666664332  223446789999999999999999999999875


Q ss_pred             CeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      . .++++||+.+|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||++.++++||+|||++....
T Consensus        90 ~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A           90 T-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             C-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            5 7899999999999999987 4579999999999999999999999999999999999999999999999999987544


Q ss_pred             CCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHh
Q 016991          161 QGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTG  236 (379)
Q Consensus       161 ~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~  236 (379)
                      ....  ......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..++.+
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID  247 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHH
T ss_pred             CCcccccccCCCccccccChHHhccCCC-CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence            3221  2233456889999999988766 489999999999999999 99999988877777666554 35667789999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcC
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +.+++.+||+.||.+|||+.+++++
T Consensus       248 ~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          248 VYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHHH
Confidence            9999999999999999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=7.5e-48  Score=361.70  Aligned_cols=252  Identities=25%  Similarity=0.360  Sum_probs=215.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||.||+|.+     ..++..||||++....  .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            357999999999999999999985     4678899999997543  223457799999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQG------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL  142 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll  142 (379)
                      .+..|+||||+++|+|.+++....                  .+++..++.++.||+.||.|||++||+||||||+||++
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~  178 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL  178 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE
Confidence            999999999999999999998654                  48999999999999999999999999999999999999


Q ss_pred             ccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 016991          143 DSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLY  219 (379)
Q Consensus       143 ~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~  219 (379)
                      +.++.+||+|||++........  ......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.......
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY-TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence            9999999999999876554322  2334567889999999987665 589999999999999998 99999887654433


Q ss_pred             HH-HHh-cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          220 KK-INA-AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       220 ~~-i~~-~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .. +.. .....|..+++++.++|.+||+.||.+|||+.+++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            33 322 2334567789999999999999999999999999874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.3e-48  Score=367.55  Aligned_cols=254  Identities=22%  Similarity=0.345  Sum_probs=213.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||.||+|.+     ..++..||||++....  .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            457899999999999999999997     3466789999997543  222346789999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQG-----------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKP  137 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~-----------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp  137 (379)
                      .+..|+||||++||+|.+++....                       .+++..++.++.||+.||.|||++||+||||||
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp  200 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA  200 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSG
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence            999999999999999999997643                       378999999999999999999999999999999


Q ss_pred             CcEEEccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCC
Q 016991          138 ENLLLDSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETD  214 (379)
Q Consensus       138 ~NIll~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~  214 (379)
                      +|||++.++.+||+|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+
T Consensus       201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY-TIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCC-ChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            99999999999999999987654322  12334567889999999987665 589999999999999998 999998876


Q ss_pred             hHHHHHHHHhc--ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcc
Q 016991          215 LPTLYKKINAA--EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       215 ~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                      .......+...  ....|..+++++.+||.+||+.||.+|||+.++++|-.
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             CSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            54443333322  34567788999999999999999999999999998643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=6.5e-48  Score=365.27  Aligned_cols=252  Identities=23%  Similarity=0.339  Sum_probs=215.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEE--EEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESV--AMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~v--aiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|++.+.||+|+||.||+|++..+|..+  |+|.+....  .....+.+.+|+.+++.+ +||||+++++++...+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   99 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred             ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence            45689999999999999999999999888866  899886432  223446788999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~  146 (379)
                      ..|+||||+++++|.+++....                .+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence            9999999999999999997654                799999999999999999999999999999999999999999


Q ss_pred             CeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc
Q 016991          147 NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA  225 (379)
Q Consensus       147 ~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~  225 (379)
                      .+||+|||++...... .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+...
T Consensus       180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~  257 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  257 (327)
T ss_dssp             CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred             eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccC-CchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC
Confidence            9999999998643321 12234457889999999977655 489999999999999998 99999998888877777655


Q ss_pred             -ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          226 -EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       226 -~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                       ....|..+++++.+||.+||..||.+|||+++++++
T Consensus       258 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          258 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             355677889999999999999999999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=1.2e-47  Score=370.64  Aligned_cols=252  Identities=25%  Similarity=0.377  Sum_probs=206.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC---CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR---ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~---~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|++.+.||+|+||.||+|++.   .++..||||++....  .....+.+.+|+.+++.++||||+++++++...+
T Consensus        42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  119 (373)
T 2qol_A           42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK  119 (373)
T ss_dssp             CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC
Confidence            44568999999999999999999987   467789999986543  3334577999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..|+||||++||+|.+++...+ .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            9999999999999999997654 799999999999999999999999999999999999999999999999999976544


Q ss_pred             Cccc---ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHh
Q 016991          162 GVEL---LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTG  236 (379)
Q Consensus       162 ~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~  236 (379)
                      ....   .....+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..++++
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~  278 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKF-TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAA  278 (373)
T ss_dssp             --------------CTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCBHH
T ss_pred             CCccceeccCCCcCCCccChhhhccCCc-CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccccHH
Confidence            2221   122335678999999987766 489999999999999998 99999988877777766554 34556678999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +.++|.+||+.||.+||++.++++
T Consensus       279 l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          279 LYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhCcChhhCcCHHHHHH
Confidence            999999999999999999999886

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=2e-47  Score=363.11  Aligned_cols=253  Identities=23%  Similarity=0.388  Sum_probs=217.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-------CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-------ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEV   77 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-------~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~   77 (379)
                      ...++|++++.||+|+||.||+|.+.       .++..||||++....  .....+.+.+|+.+++.+ +||||++++++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  109 (334)
T 2pvf_A           32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGA  109 (334)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEE
Confidence            34579999999999999999999986       467899999997543  334557789999999999 89999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEE
Q 016991           78 LASRTKVYIILEFVTGGELFDKIVHQG----------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLL  141 (379)
Q Consensus        78 ~~~~~~~~lv~E~~~gg~L~~~l~~~~----------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIl  141 (379)
                      +...+..|+||||+++|+|.+++....                .+++..++.++.||+.||.|||++||+||||||+||+
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          110 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL  189 (334)
T ss_dssp             ECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             EccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEE
Confidence            999999999999999999999997654                3899999999999999999999999999999999999


Q ss_pred             EccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHH
Q 016991          142 LDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTL  218 (379)
Q Consensus       142 l~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~  218 (379)
                      ++.++.+||+|||++........  ......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+....
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  268 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY-THQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  268 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCc-ChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence            99999999999999876544221  2233457788999999977665 589999999999999999 9999999888777


Q ss_pred             HHHHHhcc-cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          219 YKKINAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       219 ~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...+.... ...|..+++++.++|.+||+.||.+|||+.+++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            77665543 45677899999999999999999999999999874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=3.4e-47  Score=353.24  Aligned_cols=251  Identities=25%  Similarity=0.366  Sum_probs=211.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHH----HHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRM----VDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~----~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      +...++|++.+.||+|+||.||+|.+..+++.||||++..........    .+.+.+|+.+++.++||||+++++++.+
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN   94 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence            455689999999999999999999999999999999987644332221    1678899999999999999999999976


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEccCCC-----eEEee
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDSYGN-----LKVSD  152 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~~~~-----lkl~D  152 (379)
                      ..  ++||||+++++|.+.+... ..+++..+..++.|++.||.|||++|  |+||||||+||+++.++.     +||+|
T Consensus        95 ~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D  172 (287)
T 4f0f_A           95 PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD  172 (287)
T ss_dssp             TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred             CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence            65  6999999999999888654 47999999999999999999999999  999999999999988876     99999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccC-CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhc--cc
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNR-GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL--YKKINAA--EF  227 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~--~~~i~~~--~~  227 (379)
                      ||++.....   .....+||+.|+|||++... ...+.++|||||||++|+|++|..||...+....  ...+...  ..
T Consensus       173 fg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  249 (287)
T 4f0f_A          173 FGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP  249 (287)
T ss_dssp             CTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC
T ss_pred             CCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC
Confidence            999874433   33456799999999998432 2335899999999999999999999987654332  3333332  34


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..|..+++++.++|.+||+.||.+|||++++++
T Consensus       250 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            567789999999999999999999999999986

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=2.4e-47  Score=355.38  Aligned_cols=250  Identities=20%  Similarity=0.320  Sum_probs=214.0

Q ss_pred             ccCeeeee-eecccCCeEEEEEE--ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGR-TIGEGTFAKVRFAQ--NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~-~LG~G~~g~V~~a~--~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++.+ .||+|+||.||+|.  +..+++.||||++..... .....+.+.+|+.+++.++||||+++++++ ..+..
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~   92 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW   92 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence            46899998 99999999999995  466789999999976532 233457899999999999999999999999 56778


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus        93 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           93 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  172 (291)
T ss_dssp             EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             EEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence            99999999999999999888899999999999999999999999999999999999999999999999999876544222


Q ss_pred             c---ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHH
Q 016991          165 L---LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATS  239 (379)
Q Consensus       165 ~---~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~  239 (379)
                      .   .....|++.|+|||++.+..+ +.++||||||+++|+|++ |..||.+.+.......+.... ...|..+++++.+
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  251 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYD  251 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             cccccccCCCCceeeChHHhccCCC-ChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence            1   223446788999999977665 489999999999999999 999999988877777666543 5567789999999


Q ss_pred             HHHHccCCCCCCCCChHhHhc
Q 016991          240 LIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~  260 (379)
                      +|.+||+.||.+|||+.++++
T Consensus       252 li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          252 LMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999886

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.9e-47  Score=360.78  Aligned_cols=253  Identities=21%  Similarity=0.269  Sum_probs=219.1

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ...++|++.+.||+|+||.||+|.+.     .++..||||++....  .......+.+|+.+++.++||||+++++++.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   99 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   99 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc
Confidence            34578999999999999999999876     467899999987543  22344678899999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEE
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ----------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKV  150 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~----------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl  150 (379)
                      .+..|+||||++||+|.+++...          ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||
T Consensus       100 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl  179 (322)
T 1p4o_A          100 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI  179 (322)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEE
T ss_pred             CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEE
Confidence            99999999999999999998753          45789999999999999999999999999999999999999999999


Q ss_pred             eeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-
Q 016991          151 SDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-  226 (379)
Q Consensus       151 ~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-  226 (379)
                      +|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.... 
T Consensus       180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~  258 (322)
T 1p4o_A          180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVF-TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL  258 (322)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC
T ss_pred             CcCccccccccccccccccCCCCCCCccChhhhccCCC-CchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc
Confidence            9999987543321  12234467889999999987665 589999999999999999 899999988877777766554 


Q ss_pred             cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          227 FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       227 ~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ...|..+++++.+||.+||+.||.+|||+.++++|
T Consensus       259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            45677899999999999999999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=9.8e-48  Score=363.87  Aligned_cols=257  Identities=22%  Similarity=0.370  Sum_probs=191.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS-IMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++.....  ......+.+|+. +++.++||||+++++++...+..
T Consensus        19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~   96 (327)
T 3aln_A           19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDC   96 (327)
T ss_dssp             CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEE
T ss_pred             cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCce
Confidence            346899999999999999999999999999999999976432  223345555665 77888999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeecCCCCcEEEccCCCeEEeeeccccC
Q 016991           85 YIILEFVTGGELFDKIVH-----QGRLLENDCRRYFQQLIDAVAHCHSK-GVYHRDLKPENLLLDSYGNLKVSDFGLSAL  158 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-----~~~l~e~~~~~~~~qil~~l~ylH~~-gi~HrDlkp~NIll~~~~~lkl~DfGl~~~  158 (379)
                      |+||||++| +|.+++..     ...+++..+..++.|++.||.|||+. ||+||||||+||+++.++.+||+|||++..
T Consensus        97 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~  175 (327)
T 3aln_A           97 WICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQ  175 (327)
T ss_dssp             EEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred             EEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence            999999975 77777753     56899999999999999999999999 999999999999999999999999999876


Q ss_pred             CCCCcccccccccCCCCCchhhhc----cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcc-cCC---
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLS----NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAE-FSC---  229 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~-~~~---  229 (379)
                      .... ......+||+.|+|||++.    +..+ +.++|||||||++|+|++|..||.+.+.. .....+.... ..+   
T Consensus       176 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T 3aln_A          176 LVDS-IAKTRDAGCRPYMAPERIDPSASRQGY-DVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS  253 (327)
T ss_dssp             -------------------------------C-CSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred             cccc-cccccCCCCccccCceeeccccCcCCC-CchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence            5432 2223447999999999983    3334 58999999999999999999999764421 2222222211 112   


Q ss_pred             -CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          230 -PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       230 -p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                       +..+++++.+||.+||+.||.+|||+.++++||||...
T Consensus       254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence             23579999999999999999999999999999999753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.1e-47  Score=363.82  Aligned_cols=258  Identities=20%  Similarity=0.270  Sum_probs=216.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEE-----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~-----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      ....++|++++.||+|+||.||+|.     +..++..||||++....  .......+.+|+.+++.++||||+++++++.
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSL  103 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEc
Confidence            3456899999999999999999999     56678899999986432  3334567889999999999999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC---CCeE
Q 016991           80 SRTKVYIILEFVTGGELFDKIVHQG-------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLK  149 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~~~-------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~---~~lk  149 (379)
                      .....|+||||++|++|.+++....       .+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+|
T Consensus       104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~k  183 (327)
T 2yfx_A          104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAK  183 (327)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred             CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEE
Confidence            9999999999999999999998753       48899999999999999999999999999999999999954   4699


Q ss_pred             EeeeccccCCCCC--cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-
Q 016991          150 VSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-  225 (379)
Q Consensus       150 l~DfGl~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-  225 (379)
                      |+|||++......  ........|++.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+... 
T Consensus       184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~  262 (327)
T 2yfx_A          184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF-TSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG  262 (327)
T ss_dssp             ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC
T ss_pred             ECccccccccccccccccCCCcCCCcceeCHhHhcCCCC-CchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC
Confidence            9999998643221  122234568899999999987665 589999999999999998 99999988877777666554 


Q ss_pred             ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          226 EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       226 ~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      ....|..+++.+.++|.+||+.||.+|||+.++++|.|+-
T Consensus       263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            3456778899999999999999999999999999998864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-47  Score=353.56  Aligned_cols=254  Identities=24%  Similarity=0.351  Sum_probs=217.7

Q ss_pred             eeccCeeeee-eecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGR-TIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~-~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|.+.+ .||+|+||.||+|.+.  .++..||||++....  .....+.+.+|+.+++.++||||+++++++ ..+
T Consensus         6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE   82 (287)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred             ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence            4457888887 9999999999999864  467899999997643  334567899999999999999999999999 456


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..|+||||+++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            799999999999999998654 5699999999999999999999999999999999999999999999999999876543


Q ss_pred             Ccc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHh
Q 016991          162 GVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTG  236 (379)
Q Consensus       162 ~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~  236 (379)
                      ...   ......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.... ...|..++++
T Consensus       163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~  241 (287)
T 1u59_A          163 DDSYYTARSAGKWPLKWYAPECINFRKF-SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPE  241 (287)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHH
T ss_pred             CcceeeccccccccccccCHHHhccCCC-CchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCCcCHH
Confidence            221   1233456889999999977665 489999999999999998 999999888777777666543 5677889999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhcCcc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                      +.++|.+||+.||.+|||+.+++++.+
T Consensus       242 l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          242 LYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             HHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            999999999999999999999998754

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=4e-48  Score=376.76  Aligned_cols=258  Identities=24%  Similarity=0.412  Sum_probs=211.8

Q ss_pred             CCccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            1 MKKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         1 m~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      |.++...-++|++.+.||+|+||+||+|.+..+|+.||||++.......  ..+.+.+|+.+++.++||||+++++++..
T Consensus         1 m~~~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   78 (396)
T 4eut_A            1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLNHKNIVKLFAIEEE   78 (396)
T ss_dssp             -CEEECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCCCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc--hHHHHHHHHHHHHhcCCCCCCeEEEeecc
Confidence            6677788899999999999999999999999999999999997654333  24677899999999999999999999986


Q ss_pred             CC--eEEEEEeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE----ccCCCeEEe
Q 016991           81 RT--KVYIILEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL----DSYGNLKVS  151 (379)
Q Consensus        81 ~~--~~~lv~E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll----~~~~~lkl~  151 (379)
                      .+  ..|+||||++||+|.+++....   .+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (396)
T 4eut_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (396)
T ss_dssp             TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred             CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEe
Confidence            55  7899999999999999997643   39999999999999999999999999999999999999    777789999


Q ss_pred             eeccccCCCCCcccccccccCCCCCchhhhccC-------CCCCCchhHHHHHHHHHHHHhCCCCCCCCC----hHHHHH
Q 016991          152 DFGLSALPQQGVELLHTTCGTPNYVAPEVLSNR-------GYDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYK  220 (379)
Q Consensus       152 DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~----~~~~~~  220 (379)
                      |||++...... ......+||+.|+|||++.+.       ...+.++|||||||++|+|++|..||....    ......
T Consensus       159 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~  237 (396)
T 4eut_A          159 DFGAARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY  237 (396)
T ss_dssp             CGGGCEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHH
T ss_pred             cCCCceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHH
Confidence            99999765443 234456799999999998652       223478999999999999999999996422    233333


Q ss_pred             HHHhccc---------------------CCC----CCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          221 KINAAEF---------------------SCP----FWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       221 ~i~~~~~---------------------~~p----~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+.....                     +.+    ..+++.+.++|.+||+.||++|||+++++++
T Consensus       238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             HHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             HHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            4433321                     111    1235678899999999999999999997653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.7e-47  Score=361.57  Aligned_cols=251  Identities=22%  Similarity=0.328  Sum_probs=209.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEE----EEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESV----AMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~v----aiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ...++|++++.||+|+||.||+|.+..+++.|    |+|.+....  .....+.+.+|+.+++.++||||+++++++...
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   89 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC
Confidence            44679999999999999999999999888866    555543322  222457789999999999999999999999876


Q ss_pred             CeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      . .++++||+.+|+|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        90 ~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A           90 T-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             S-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             C-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            5 88999999999999999764 579999999999999999999999999999999999999999999999999997654


Q ss_pred             CCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHh
Q 016991          161 QGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTG  236 (379)
Q Consensus       161 ~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~  236 (379)
                      ....  ......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.... ...|..++++
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTID  247 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTBCHH
T ss_pred             CccccccccCCCccccccCHHHHcCCCC-ChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHH
Confidence            3221  2234456788999999988766 489999999999999999 999999988877777665543 5667789999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +.++|.+||+.||.+|||+.++++
T Consensus       248 l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          248 VYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999987

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=1.6e-47  Score=359.93  Aligned_cols=252  Identities=23%  Similarity=0.368  Sum_probs=214.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||.||+|.+     ..+++.||||++....  .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  102 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK  102 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence            457999999999999999999985     4577899999997643  233456789999999999 69999999999876


Q ss_pred             CC-eEEEEEeccCCCChHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc
Q 016991           81 RT-KVYIILEFVTGGELFDKIVHQGR----------------LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD  143 (379)
Q Consensus        81 ~~-~~~lv~E~~~gg~L~~~l~~~~~----------------l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~  143 (379)
                      .+ ..|+||||++|++|.+++.....                +++..++.++.||+.||.|||++||+||||||+||+++
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~  182 (316)
T 2xir_A          103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS  182 (316)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred             CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence            54 59999999999999999987554                88999999999999999999999999999999999999


Q ss_pred             cCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH-HHH
Q 016991          144 SYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP-TLY  219 (379)
Q Consensus       144 ~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~-~~~  219 (379)
                      .++.+||+|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.. ...
T Consensus       183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~  261 (316)
T 2xir_A          183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY-TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  261 (316)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH
T ss_pred             CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccc-cchhHHHHHHHHHHHHHhCCCCCCcccchhHHHH
Confidence            99999999999997654322  22335568899999999987766 489999999999999998 99999876643 333


Q ss_pred             HHHHh-cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          220 KKINA-AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       220 ~~i~~-~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..+.. .....|..+++++.++|.+||+.||.+|||+.++++|
T Consensus       262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          262 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            33333 3456677899999999999999999999999999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=4.5e-47  Score=351.58  Aligned_cols=253  Identities=24%  Similarity=0.305  Sum_probs=212.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRE---TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ....++|++.+.||+|+||.||+|.+..   ++..||+|++....  .....+.+.+|+.+++.++||||+++++++.+.
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   85 (281)
T 3cc6_A            8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE   85 (281)
T ss_dssp             SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS
T ss_pred             eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC
Confidence            3456899999999999999999998654   34569999987643  233457899999999999999999999998754


Q ss_pred             CeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                       ..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        86 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A           86 -PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             -SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             -CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence             578999999999999999765 459999999999999999999999999999999999999999999999999987654


Q ss_pred             CCc-ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhH
Q 016991          161 QGV-ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGA  237 (379)
Q Consensus       161 ~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~  237 (379)
                      ... .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||...+.......+... ....|..+++.+
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (281)
T 3cc6_A          165 DEDYYKASVTRLPIKWMSPESINFRRF-TTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVL  243 (281)
T ss_dssp             --------CCCCCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCTTCCHHH
T ss_pred             cccccccccCCCCcceeCchhhccCCC-CchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCCCCCHHH
Confidence            422 12234557889999999977666 489999999999999998 99999877766666655544 455677789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .++|.+||+.||.+|||+.+++++
T Consensus       244 ~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          244 YTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCCchhCcCHHHHHHH
Confidence            999999999999999999999874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=3.5e-47  Score=355.58  Aligned_cols=253  Identities=25%  Similarity=0.381  Sum_probs=209.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      .....+|++++.||+|+||.||+|+    +..+|+.||||++.....  ....+.+.+|+.+++.++||||+++++++..
T Consensus        17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   94 (302)
T 4e5w_A           17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG--GNHIADLKKEIEILRNLYHENIVKYKGICTE   94 (302)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc--chhHHHHHHHHHHHHhCCCCCeeeeeeEEec
Confidence            3445679999999999999999999    577899999999975432  2234678999999999999999999999987


Q ss_pred             C--CeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           81 R--TKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        81 ~--~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      .  ..+|+||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        95 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~  174 (302)
T 4e5w_A           95 DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK  174 (302)
T ss_dssp             ---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred             CCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence            6  679999999999999999954 4679999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCc---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---------------hHHHH
Q 016991          158 LPQQGV---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD---------------LPTLY  219 (379)
Q Consensus       158 ~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---------------~~~~~  219 (379)
                      ......   .......||+.|+|||++.+..+. .++|||||||++|+|++|..|+....               .....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  253 (302)
T 4e5w_A          175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFY-IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV  253 (302)
T ss_dssp             ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred             cccCCCcceeccCCCCCCccccCCeeecCCCCC-cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence            655432   223455688889999999876664 89999999999999999999864321               11122


Q ss_pred             HHHH-hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          220 KKIN-AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       220 ~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..+. ......|..+++++.+||.+||+.||.+|||+.++++
T Consensus       254 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          254 NTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            2222 2345567789999999999999999999999999886

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.5e-47  Score=356.42  Aligned_cols=254  Identities=22%  Similarity=0.330  Sum_probs=207.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECC---CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRE---TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~---~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|++++.||+|+||.||+|.+..   ++..||+|++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  109 (313)
T 3brb_A           31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS  109 (313)
T ss_dssp             CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred             cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence            445789999999999999999998765   556899999876433 3344577899999999999999999999997654


Q ss_pred             -----eEEEEEeccCCCChHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEe
Q 016991           83 -----KVYIILEFVTGGELFDKIVH------QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        83 -----~~~lv~E~~~gg~L~~~l~~------~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                           ..|+||||+++++|.+++..      ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+
T Consensus       110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~  189 (313)
T 3brb_A          110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA  189 (313)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEEC
T ss_pred             ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEe
Confidence                 45999999999999999843      3569999999999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-cc
Q 016991          152 DFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EF  227 (379)
Q Consensus       152 DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~  227 (379)
                      |||++.......  .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ..
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~  268 (313)
T 3brb_A          190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY-TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL  268 (313)
T ss_dssp             SCSCC----------------CCGGGSCHHHHHSSCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC
T ss_pred             ecCcceecccccccCcccccCCCccccCchhhcCCCc-cchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC
Confidence            999987654321  12234457889999999987665 489999999999999999 99999988877777666554 45


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..|..+++++.++|.+||..||.+|||+.+++++
T Consensus       269 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          269 KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6677899999999999999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=7.9e-47  Score=373.63  Aligned_cols=244  Identities=25%  Similarity=0.444  Sum_probs=212.3

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-eE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-KV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-~~   84 (379)
                      ...++|++.+.||+|+||.||+|.+.  |+.||||++....     ..+.+.+|+.+|+.++||||+++++++.... .+
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCce
Confidence            34678999999999999999999885  7899999997543     2367889999999999999999999987654 79


Q ss_pred             EEEEeccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~--l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      |+||||+++|+|.+++...+.  +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  342 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  342 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence            999999999999999987654  799999999999999999999999999999999999999999999999998754322


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSL  240 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~l  240 (379)
                         .....+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+..+ ....|..+++++.+|
T Consensus       343 ---~~~~~~~~~y~aPE~~~~~~~-~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~l  418 (450)
T 1k9a_A          343 ---QDTGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYDV  418 (450)
T ss_dssp             -------CCCTTTSCHHHHHSSCC-CHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ---ccCCCCCcceeCHHHhcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence               223467889999999987776 489999999999999998 99999988777776666554 456788899999999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      |.+||+.||.+|||+.++++
T Consensus       419 i~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          419 MKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999876

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-46  Score=358.36  Aligned_cols=253  Identities=25%  Similarity=0.337  Sum_probs=211.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCC----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETG----ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ...++|++.+.||+|+||.||+|.+..++    ..||||++....  .......+.+|+.+++.++||||+++++++...
T Consensus        41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  118 (333)
T 1mqb_A           41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY  118 (333)
T ss_dssp             CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence            44578999999999999999999987553    359999987543  233456789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      +..|+||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus       119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            9999999999999999999764 679999999999999999999999999999999999999999999999999987654


Q ss_pred             CCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCH
Q 016991          161 QGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFST  235 (379)
Q Consensus       161 ~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~  235 (379)
                      ....   ......+|+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKF-TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS  277 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBH
T ss_pred             cccccccccCCCCccccccCchhcccCCC-CchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccCCH
Confidence            3221   1122346778999999987665 489999999999999998 99999988887777776654 4556777899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.++|.+||+.||.+||++.+++++
T Consensus       278 ~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          278 AIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999998874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.9e-47  Score=361.40  Aligned_cols=251  Identities=24%  Similarity=0.368  Sum_probs=214.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCc-----EEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGE-----SVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~   80 (379)
                      ..++|++++.||+|+||.||+|.+..++.     .||+|++....  .....+.+.+|+.+++.+ +||||+++++++..
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~  121 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTH  121 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence            45689999999999999999999987665     79999987543  233457799999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ--------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~--------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~  146 (379)
                      .+..|+||||+++|+|.+++...              ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus       122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~  201 (333)
T 2i1m_A          122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH  201 (333)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGG
T ss_pred             CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCC
Confidence            99999999999999999999753              3579999999999999999999999999999999999999999


Q ss_pred             CeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q 016991          147 NLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKIN  223 (379)
Q Consensus       147 ~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~  223 (379)
                      .+||+|||++.......  .......||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.........+.
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  280 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY-TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV  280 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCC-ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence            99999999987543321  12234557889999999987666 489999999999999998 999998876544433333


Q ss_pred             hc--ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          224 AA--EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       224 ~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..  ....|...++++.++|.+||+.||.+|||+.++++
T Consensus       281 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          281 KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            22  34457778999999999999999999999999987

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=5.1e-47  Score=350.91  Aligned_cols=247  Identities=26%  Similarity=0.377  Sum_probs=212.0

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS------   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~------   80 (379)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++....       +.+.+|+.+++.++||||+++++++..      
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE   81 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence            4468999999999999999999999999999999987542       346689999999999999999998864      


Q ss_pred             ----------CCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCe
Q 016991           81 ----------RTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNL  148 (379)
Q Consensus        81 ----------~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~l  148 (379)
                                ...+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             -------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCE
Confidence                      45689999999999999999754  579999999999999999999999999999999999999999999


Q ss_pred             EEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC
Q 016991          149 KVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS  228 (379)
Q Consensus       149 kl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  228 (379)
                      ||+|||++...... .......||+.|+|||++.+..+ +.++||||||+++|+|++|..||...  ......+...  .
T Consensus       162 kl~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~--~  235 (284)
T 2a19_B          162 KIGDFGLVTSLKND-GKRTRSKGTLRYMSPEQISSQDY-GKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG--I  235 (284)
T ss_dssp             EECCCTTCEESSCC-SCCCCCCSCCTTSCHHHHHCSCC-CTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT--C
T ss_pred             EECcchhheecccc-ccccccCCcccccChhhhccCCC-cchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc--c
Confidence            99999998765443 22345679999999999987666 58999999999999999999887432  2233333332  3


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .+..+++++.++|.+||+.||.+|||+.++++|.|.-.
T Consensus       236 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          236 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            56678999999999999999999999999999987643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.4e-47  Score=380.56  Aligned_cols=249  Identities=26%  Similarity=0.382  Sum_probs=218.9

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ...+|++.+.||+|+||.||+|.+..++..||||++.....    ..+.+.+|+.+|+.++||||+++++++...+.+|+
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence            34679999999999999999999999999999999976432    24678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||+++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence            99999999999999864  458999999999999999999999999999999999999999999999999998654322 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......+++.|+|||++....+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++++.+||
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  452 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELM  452 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             eecCCCcCCcceeCHhHHhcCCC-CcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            12223446778999999987665 489999999999999999 99999998887777766544 4566788999999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||.+|||+.++++
T Consensus       453 ~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          453 RACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCcChhHCcCHHHHHH
Confidence            9999999999999999986

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=5.4e-47  Score=356.88  Aligned_cols=251  Identities=24%  Similarity=0.371  Sum_probs=205.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE----eCCe
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA----SRTK   83 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~----~~~~   83 (379)
                      -++|++.+.||+|+||.||+|.+..+|+.||||++...   .....+.+.+|+.+++.++||||+++++++.    ....
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence            35899999999999999999999999999999998653   2344577899999999999999999999986    3457


Q ss_pred             EEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           84 VYIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .|+||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            9999999999999999876    467999999999999999999999999999999999999999999999999988654


Q ss_pred             CCCcc---------cccccccCCCCCchhhhccCCC--CCCchhHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHH-hc
Q 016991          160 QQGVE---------LLHTTCGTPNYVAPEVLSNRGY--DGSAADVWSCGVILFVLMAGYLPFGETD--LPTLYKKIN-AA  225 (379)
Q Consensus       160 ~~~~~---------~~~~~~gt~~y~aPE~l~~~~~--~~~~~DiwSlGvil~~ll~g~~Pf~~~~--~~~~~~~i~-~~  225 (379)
                      .....         ......||+.|+|||++.+...  .+.++|||||||++|+|++|..||....  .......+. ..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  264 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL  264 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence            32111         1123468999999999865432  3589999999999999999999995311  011111222 22


Q ss_pred             ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          226 EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       226 ~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..+.+..+++++.++|.+||+.||.+|||+++++++
T Consensus       265 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          265 SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             -CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            234445789999999999999999999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.3e-46  Score=348.03  Aligned_cols=247  Identities=23%  Similarity=0.389  Sum_probs=213.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||.||+|.+. ++..||||++.....    ..+.+.+|+.+++.++||||+++++++.. +..|+
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   84 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI   84 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence            4578999999999999999999976 567899999865432    23678899999999999999999999874 56899


Q ss_pred             EEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||++|++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (279)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence            999999999999987543  79999999999999999999999999999999999999999999999999987654422 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......+++.|+|||++.+..+ +.++||||||+++|+|++ |..||.+.+.......+... ....|..+++++.++|
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  243 (279)
T 1qpc_A          165 TAREGAKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLM  243 (279)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccccCCCCccCccChhhhccCCC-CchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcccccHHHHHHH
Confidence            22234457889999999976655 489999999999999999 99999988877777666554 3456677899999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||..||.+|||++++++
T Consensus       244 ~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          244 RLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhccChhhCCCHHHHHH
Confidence            9999999999999999886

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2e-46  Score=349.24  Aligned_cols=248  Identities=22%  Similarity=0.290  Sum_probs=207.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEE-EEeCCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEV-LASRTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~-~~~~~~~   84 (379)
                      ...++|++.+.||+|+||.||+|++..+|+.||||++......     +.+.+|+.+++.++|++++..+.. .......
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence            3457999999999999999999999999999999998664322     357899999999998876665554 4677889


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccccCCC
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~~~~~  160 (379)
                      |+||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            9999999 9999999974 4679999999999999999999999999999999999999   588999999999987654


Q ss_pred             CCcc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHhcccCCC
Q 016991          161 QGVE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD---LPTLYKKINAAEFSCP  230 (379)
Q Consensus       161 ~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~---~~~~~~~i~~~~~~~p  230 (379)
                      ....       .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+   .......+.......|
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQ-SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             ccccccccccccccccccccccCChhhhcCCCC-CcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc
Confidence            4221       1345679999999999987665 589999999999999999999997643   2234444443333333


Q ss_pred             -----CCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          231 -----FWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       231 -----~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                           ..+|+++.++|.+||+.||.+|||++++++
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence                 678999999999999999999999999887

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.3e-46  Score=349.17  Aligned_cols=248  Identities=23%  Similarity=0.341  Sum_probs=210.8

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE-E
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV-Y   85 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~-~   85 (379)
                      .|++.+.||+|+||+||+|.+..++.   .||+|++....  .....+.+.+|+.+++.++||||+++++++.+.+.. +
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   99 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH   99 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence            57778999999999999999766555   79999986532  334567889999999999999999999999866655 9


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ++|||+.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... 
T Consensus       100 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          100 VLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             EEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             EEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence            99999999999999976 4578999999999999999999999999999999999999999999999999997554321 


Q ss_pred             ---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHH
Q 016991          164 ---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGAT  238 (379)
Q Consensus       164 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~  238 (379)
                         .......|++.|+|||++.+..+ +.++|||||||++|+|++ |.+||...+.......+.... ...|..+++++.
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  258 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRF-TTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY  258 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCC-CHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             cccccCcCCCCCccccChhhhccCCC-ChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHH
Confidence               22334568889999999987665 489999999999999999 566677767666666655443 556777899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++|.+||+.||.+|||+.++++
T Consensus       259 ~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          259 QVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999887

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=9.3e-47  Score=373.56  Aligned_cols=247  Identities=22%  Similarity=0.417  Sum_probs=214.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||+||+|.+. ++..||||++.....    ..+.+.+|+.+|+.++||||+++++++. .+..|+
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l  259 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI  259 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence            4568999999999999999999986 477899999976432    2467899999999999999999999986 567999


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||+++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       260 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~  339 (454)
T 1qcf_A          260 ITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  339 (454)
T ss_dssp             EECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred             EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence            99999999999999754  378999999999999999999999999999999999999999999999999997654321 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......+++.|+|||++....+ +.++|||||||++|+|++ |..||.+.+.......+... ....|..+++++.+||
T Consensus       340 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  418 (454)
T 1qcf_A          340 TAREGAKFPIKWTAPEAINFGSF-TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIM  418 (454)
T ss_dssp             HTTCSSSSCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSCHHHHHHH
T ss_pred             eccCCCcccccccCHHHhccCCC-CcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            11223446778999999987666 489999999999999999 99999998887777766554 4566778999999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||.+|||+++|++
T Consensus       419 ~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          419 MRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhHCcCHHHHHH
Confidence            9999999999999999876

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=5.1e-47  Score=362.08  Aligned_cols=250  Identities=16%  Similarity=0.163  Sum_probs=200.6

Q ss_pred             cCeeeeeeecccCCeEEEEEEECC---CCcEEEEEEeecccccchH--------HHHHHHHHHHHHHhCCCCCcceEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRE---TGESVAMKVLAKSTILKHR--------MVDQIKREISIMKIVRHPNIVRLHEV   77 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~---~~~~vaiK~i~~~~~~~~~--------~~~~~~~Ei~~l~~l~hp~Iv~l~~~   77 (379)
                      ++|++++.||+|+||.||+|.+..   ++..||||++.........        ....+.+|+..++.++||||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            589999999999999999999987   7899999998764321111        11236678899999999999999999


Q ss_pred             EEe----CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC--CeEEe
Q 016991           78 LAS----RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG--NLKVS  151 (379)
Q Consensus        78 ~~~----~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~--~lkl~  151 (379)
                      +..    ....|+||||+ |++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++  .+||+
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~  195 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA  195 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence            987    78999999999 999999998878999999999999999999999999999999999999999887  99999


Q ss_pred             eeccccCCCCCc-------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHH
Q 016991          152 DFGLSALPQQGV-------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET--DLPTLYKKI  222 (379)
Q Consensus       152 DfGl~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~--~~~~~~~~i  222 (379)
                      |||++.......       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.  +........
T Consensus       196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~  274 (345)
T 2v62_A          196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVAL-SRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAK  274 (345)
T ss_dssp             CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCC-CHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHH
T ss_pred             eCCCceecccccccccchhccccccCCCccccCHHHhcCCCC-CchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHH
Confidence            999997553321       12245679999999999987655 58999999999999999999999652  222222222


Q ss_pred             HhcccCCCC---------CCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          223 NAAEFSCPF---------WFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       223 ~~~~~~~p~---------~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .......|.         .+++++.++|.+||..||.+|||++++++
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          275 TNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            221122222         68899999999999999999999999887

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=8.7e-47  Score=349.12  Aligned_cols=244  Identities=25%  Similarity=0.441  Sum_probs=206.0

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-RTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~~~~   84 (379)
                      ...++|++.+.||+|+||.||+|.+.  |+.||||++....     ..+.+.+|+.+++.++||||+++++++.. .+..
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (278)
T 1byg_A           18 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   90 (278)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred             CChhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCce
Confidence            45689999999999999999999884  8899999986543     34678899999999999999999998754 4579


Q ss_pred             EEEEeccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~--l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      |+||||+++++|.+++...+.  +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  170 (278)
T 1byg_A           91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST  170 (278)
T ss_dssp             EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred             EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeecccccccccc
Confidence            999999999999999976543  899999999999999999999999999999999999999999999999998754332


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSL  240 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~l  240 (379)
                         .....+++.|+|||++.+..+ +.++||||||+++|+|++ |..||...+.......+... ....|..+++++.++
T Consensus       171 ---~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  246 (278)
T 1byg_A          171 ---QDTGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV  246 (278)
T ss_dssp             --------CCTTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHH
T ss_pred             ---ccCCCccccccCHHHhCCCCC-CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCcccCCHHHHHH
Confidence               234467889999999987666 489999999999999998 99999988877777666544 456677899999999


Q ss_pred             HHHccCCCCCCCCChHhHhc
Q 016991          241 IHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~  260 (379)
                      |.+||+.||.+|||+.++++
T Consensus       247 i~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          247 MKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhcCChhhCCCHHHHHH
Confidence            99999999999999999886

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.2e-46  Score=352.40  Aligned_cols=234  Identities=31%  Similarity=0.576  Sum_probs=195.6

Q ss_pred             cceeccCeeee-eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHH-HhCCCCCcceEEEEEEe-
Q 016991            4 QTRRVAKYEVG-RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHPNIVRLHEVLAS-   80 (379)
Q Consensus         4 ~~~~~~~y~~~-~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l-~~l~hp~Iv~l~~~~~~-   80 (379)
                      ....+++|.+. +.||+|+||.||+|.+..+|+.||||++...        ....+|+.++ +.++||||+++++++.. 
T Consensus        12 ~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~   83 (299)
T 3m2w_A           12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENL   83 (299)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             ccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhh
Confidence            35678899998 7899999999999999999999999998642        3466788887 67799999999999987 


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CCCeEEee
Q 016991           81 ---RTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSD  152 (379)
Q Consensus        81 ---~~~~~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~~lkl~D  152 (379)
                         ....|+||||++|++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.   ++.+||+|
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             ETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             cCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence               778999999999999999998754  6999999999999999999999999999999999999998   78899999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH----HHHHhcccC
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY----KKINAAEFS  228 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~----~~i~~~~~~  228 (379)
                      ||++.....                      ..+ +.++|||||||++|+|++|..||.+.+.....    ..+......
T Consensus       164 fg~a~~~~~----------------------~~~-~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~  220 (299)
T 3m2w_A          164 FGFAKETTG----------------------EKY-DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE  220 (299)
T ss_dssp             CTTCEECTT----------------------CGG-GGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCS
T ss_pred             ccccccccc----------------------ccC-CchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcccc
Confidence            998853321                      122 47899999999999999999999776543322    122223333


Q ss_pred             CC----CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          229 CP----FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       229 ~p----~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .|    ..+++++.+||.+||+.||.+|||++++++||||+...
T Consensus       221 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          221 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            34    45899999999999999999999999999999998654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=5.1e-47  Score=352.36  Aligned_cols=252  Identities=25%  Similarity=0.409  Sum_probs=206.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC-CCc--EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE-TGE--SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~-~~~--~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ..++|++.+.||+|+||.||+|.+.. ++.  .||||++...........+.+.+|+.+++.++||||+++++++.... 
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence            35689999999999999999998643 333  68999987665445556688999999999999999999999998765 


Q ss_pred             EEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .++||||+++++|.+++... +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence            89999999999999999764 57999999999999999999999999999999999999999999999999998765442


Q ss_pred             cc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc--cCCCCCCCHh
Q 016991          163 VE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE--FSCPFWFSTG  236 (379)
Q Consensus       163 ~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~  236 (379)
                      ..   ......+|+.|+|||++.+..+ +.++||||||+++|+|++ |..||.+.+.......+....  ...+..++++
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQD  253 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHH
T ss_pred             ccchhhhccCCCCceeeCchhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHH
Confidence            21   2234567888999999987665 489999999999999999 999999988887777776543  3455678999


Q ss_pred             HHHHHHHccCCCCCCCCChHhHhc
Q 016991          237 ATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       237 ~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +.++|.+||..||.+|||+.++++
T Consensus       254 l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          254 IYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999999997

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2e-46  Score=349.90  Aligned_cols=251  Identities=24%  Similarity=0.291  Sum_probs=209.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEE-EeCC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVL-ASRT   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~-~~~~   82 (379)
                      ...+|++.+.||+|+||.||+|.+..++   ..||+|.+....  .....+.+.+|+.+++.++||||+++++++ ...+
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  100 (298)
T 3f66_A           23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG  100 (298)
T ss_dssp             GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred             cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence            3457999999999999999999976443   368999886532  344567899999999999999999999985 4567


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~  180 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD  180 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred             ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence            889999999999999999763 4689999999999999999999999999999999999999999999999999976544


Q ss_pred             Cc----ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCH
Q 016991          162 GV----ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFST  235 (379)
Q Consensus       162 ~~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~  235 (379)
                      ..    .......||+.|+|||++.+..+ +.++||||||+++|+|++ |.+||.+.+.......+.... ...|..+++
T Consensus       181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (298)
T 3f66_A          181 KEYYSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD  259 (298)
T ss_dssp             GGGCBC-----CCBCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTTCCH
T ss_pred             cchhccccccCCCCCccccChHHhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCccCCH
Confidence            21    12234567889999999987766 489999999999999999 778888777666655555444 445777899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++.++|.+||+.||.+|||+.++++
T Consensus       260 ~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          260 PLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999999887

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.4e-46  Score=349.93  Aligned_cols=251  Identities=22%  Similarity=0.373  Sum_probs=198.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...-++|++++.||+|+||.||+|.+.   ..||+|++.... ......+.+.+|+.+++.++||||++++++. .....
T Consensus        20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~   94 (289)
T 3og7_A           20 EIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQL   94 (289)
T ss_dssp             BCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSC
T ss_pred             ccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCcc
Confidence            455679999999999999999999864   359999986543 2344567899999999999999999999965 55678


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC--
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~--  161 (379)
                      ++||||++|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....  
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A           95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS  174 (289)
T ss_dssp             EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred             EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccc
Confidence            999999999999999954 45799999999999999999999999999999999999999999999999999875443  


Q ss_pred             CcccccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccC-----CCCCC
Q 016991          162 GVELLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFS-----CPFWF  233 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~-----~p~~~  233 (379)
                      ........+||+.|+|||++..  ....+.++|||||||++|+|++|..||.+.+.. .....+......     .+..+
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (289)
T 3og7_A          175 GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC  254 (289)
T ss_dssp             ---------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTS
T ss_pred             ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccC
Confidence            2223345679999999999862  223357999999999999999999999875544 444444443332     23467


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ++++.+||.+||+.||.+|||+.++++
T Consensus       255 ~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          255 PKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            899999999999999999999999886

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=5.4e-47  Score=358.56  Aligned_cols=247  Identities=21%  Similarity=0.228  Sum_probs=199.6

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      ..++|++++.||+|+||+||+|.+.  ++.||||++....    .......+|+.+++.++||||+++++++....    
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSE
T ss_pred             chhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCc
Confidence            3568999999999999999999886  7999999986542    22345567999999999999999999998643    


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----------CceeecCCCCcEEEccCCCeEEee
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK----------GVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~----------gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                      .+|+||||+++|+|.+++.. ..+++..++.++.||+.||.|||+.          ||+||||||+|||++.++.+||+|
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D  174 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD  174 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred             eEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence            47999999999999999976 5699999999999999999999999          999999999999999999999999


Q ss_pred             eccccCCCCCc--ccccccccCCCCCchhhhccCCC----CCCchhHHHHHHHHHHHHhCCCCCCCCCh-----------
Q 016991          153 FGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGY----DGSAADVWSCGVILFVLMAGYLPFGETDL-----------  215 (379)
Q Consensus       153 fGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~----~~~~~DiwSlGvil~~ll~g~~Pf~~~~~-----------  215 (379)
                      ||++.......  ......+||+.|+|||++.+...    .+.++|||||||++|+|++|..||.+...           
T Consensus       175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~  254 (322)
T 3soc_A          175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG  254 (322)
T ss_dssp             CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred             CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence            99997544322  22344689999999999976322    23578999999999999999999975421           


Q ss_pred             -----HHHHHHHHhccc--CCCCC-----CCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          216 -----PTLYKKINAAEF--SCPFW-----FSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       216 -----~~~~~~i~~~~~--~~p~~-----~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                           ......+.....  ..+..     .++++.+||.+||+.||.+|||+.++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                 122222222111  11111     2345899999999999999999999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=8.8e-47  Score=357.46  Aligned_cols=251  Identities=24%  Similarity=0.373  Sum_probs=212.0

Q ss_pred             eccCeeeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE--e
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA--S   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~--~   80 (379)
                      ..++|++++.||+|+||.||+|+    +..++..||||++...   .....+.+.+|+.+++.++||||+++++++.  .
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   97 (327)
T 3lxl_A           21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG   97 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence            35799999999999999999999    5678999999998654   2334567899999999999999999999886  5


Q ss_pred             CCeEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ....|+||||++|++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~  177 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLL  177 (327)
T ss_dssp             SCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred             CceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceec
Confidence            5679999999999999999976 456999999999999999999999999999999999999999999999999999765


Q ss_pred             CCCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------------HHHHH
Q 016991          160 QQGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP---------------TLYKK  221 (379)
Q Consensus       160 ~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~---------------~~~~~  221 (379)
                      .....   ......||+.|+|||++.+..+ +.++|||||||++|+|++|..||......               .....
T Consensus       178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3lxl_A          178 PLDKDYYVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL  256 (327)
T ss_dssp             CTTCSEEECSSCCCSCGGGSCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred             ccCCccceeeccCCccccccCHHHhccCCC-ChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            44221   2234568888999999987665 58999999999999999999999654321               12222


Q ss_pred             HH-hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          222 IN-AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       222 i~-~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +. ......|..+++++.+||.+||+.||.+|||+++++++
T Consensus       257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            22 22345677899999999999999999999999999764

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1.5e-46  Score=349.89  Aligned_cols=247  Identities=21%  Similarity=0.290  Sum_probs=203.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEE-EeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVL-ASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~-~~~~~~~   85 (379)
                      .-++|++++.||+|+||.||+|.+..+++.||||++......     +.+.+|+.+++.++|++++..+..+ ...+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV   81 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence            457899999999999999999999999999999987654322     3577899999999988776665554 6788899


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccccCCCC
Q 016991           86 IILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~~~~~~  161 (379)
                      +||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  160 (296)
T 4hgt_A           82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  160 (296)
T ss_dssp             EEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred             EEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence            999999 9999999875 4679999999999999999999999999999999999999   7889999999999876544


Q ss_pred             Ccc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcccCCC-
Q 016991          162 GVE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEFSCP-  230 (379)
Q Consensus       162 ~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~~~p-  230 (379)
                      ...       .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.   ......+.......| 
T Consensus       161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 4hgt_A          161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQ-SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             cccCccCCCCcccccCCCccccchHHhcCCCC-CchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence            211       2235679999999999987765 5899999999999999999999976432   233334433333333 


Q ss_pred             ----CCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          231 ----FWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       231 ----~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                          ..+++++.+||.+||+.||.+|||++++++
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence                567999999999999999999999999887

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=1.6e-47  Score=361.62  Aligned_cols=252  Identities=21%  Similarity=0.285  Sum_probs=207.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||+|.+. +|+.||||++....   ....+.+.+|+.+++.++||||+++++++...+..|
T Consensus        36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  111 (321)
T 2qkw_B           36 EATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI  111 (321)
T ss_dssp             CCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred             HHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence            34679999999999999999999964 68999999886543   224567899999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           86 IILEFVTGGELFDKIVHQG----RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~----~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +||||++||+|.+++....    .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus       112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  191 (321)
T 2qkw_B          112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE  191 (321)
T ss_dssp             EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred             EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence            9999999999999886543    589999999999999999999999999999999999999999999999999875433


Q ss_pred             C--cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHH---H----HHHHhccc-----
Q 016991          162 G--VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL---Y----KKINAAEF-----  227 (379)
Q Consensus       162 ~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~---~----~~i~~~~~-----  227 (379)
                      .  .......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+......   .    .......+     
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (321)
T 2qkw_B          192 LDQTHLSTVVKGTLGYIDPEYFIKGRL-TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVD  270 (321)
T ss_dssp             SSCCCCBCCCEEETTTCCHHHHHHCBC-CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSS
T ss_pred             ccccccccccCCCccccCHHHhcCCCC-CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcC
Confidence            1  122344569999999999987666 5899999999999999999999976432211   1    11111111     


Q ss_pred             -----CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCc
Q 016991          228 -----SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHP  262 (379)
Q Consensus       228 -----~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp  262 (379)
                           ..+...+..+.+++.+||+.||.+|||+.+++++.
T Consensus       271 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                 11222456788999999999999999999999864

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.3e-46  Score=361.80  Aligned_cols=250  Identities=14%  Similarity=0.168  Sum_probs=199.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCC-----CcEEEEEEeecccccchHHH--------HHHHHHHHHHHhCCCCCcceEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRET-----GESVAMKVLAKSTILKHRMV--------DQIKREISIMKIVRHPNIVRLH   75 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~-----~~~vaiK~i~~~~~~~~~~~--------~~~~~Ei~~l~~l~hp~Iv~l~   75 (379)
                      ++|++++.||+|+||.||+|.+..+     ++.||||++...........        ....+|+..++.++||||++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            3899999999999999999998765     58999999876431111111        1234566677888999999999


Q ss_pred             EEEEeC----CeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc--cCCCe
Q 016991           76 EVLASR----TKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD--SYGNL  148 (379)
Q Consensus        76 ~~~~~~----~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~--~~~~l  148 (379)
                      +++...    ...|+||||+ |++|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++  .++.+
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~  193 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV  193 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCE
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeE
Confidence            998764    5689999999 99999999876 6899999999999999999999999999999999999999  88999


Q ss_pred             EEeeeccccCCCCCc-------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 016991          149 KVSDFGLSALPQQGV-------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK  221 (379)
Q Consensus       149 kl~DfGl~~~~~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~  221 (379)
                      ||+|||++.......       ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.........
T Consensus       194 kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~  272 (364)
T 3op5_A          194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAP-SRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR  272 (364)
T ss_dssp             EECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred             EEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCC-CchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence            999999997554321       11234569999999999987765 5999999999999999999999986432211111


Q ss_pred             HHh----cc-------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          222 INA----AE-------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       222 i~~----~~-------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ...    ..       ...+..+++++.++|..||..||.+||++++|++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          273 DSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            100    00       0112467999999999999999999999999887

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-46  Score=370.64  Aligned_cols=249  Identities=25%  Similarity=0.401  Sum_probs=196.7

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      +|.+.+.||+|+||+|+. ....+|+.||||++......      .+.+|+.+|+.+ +||||+++++++.+....|+||
T Consensus        25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~   97 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI   97 (432)
T ss_dssp             EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence            499999999999999764 34457999999998654322      245799999999 7999999999999999999999


Q ss_pred             eccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CC--CeEEeeeccccCCCCC
Q 016991           89 EFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YG--NLKVSDFGLSALPQQG  162 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~--~lkl~DfGl~~~~~~~  162 (379)
                      |||. |+|.+++.... ..++..+..++.||+.||.|||++||+||||||+|||++.   ++  .+||+|||++......
T Consensus        98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~  176 (432)
T 3p23_A           98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG  176 (432)
T ss_dssp             ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred             ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence            9995 59999987654 4666678899999999999999999999999999999953   23  5789999999765432


Q ss_pred             c---ccccccccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcccC---CCCCC
Q 016991          163 V---ELLHTTCGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEFS---CPFWF  233 (379)
Q Consensus       163 ~---~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~~---~p~~~  233 (379)
                      .   ......+||+.|+|||++.+.  ...+.++|||||||++|+|++ |..||...........+......   .+...
T Consensus       177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (432)
T 3p23_A          177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHE  256 (432)
T ss_dssp             ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHH
T ss_pred             CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccc
Confidence            1   233456899999999999742  233579999999999999999 99999766554443333222222   12234


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +..+.+||.+||+.||.+|||++++++||||..
T Consensus       257 ~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          257 DVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             HHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             cHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            667899999999999999999999999999964

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=3.4e-46  Score=367.46  Aligned_cols=248  Identities=28%  Similarity=0.404  Sum_probs=193.5

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +.|.+.+.||+|+||+||.+. ..+|+.||||++....      .+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv   87 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA   87 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred             heeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence            456667899999999998764 4579999999986532      34577899999875 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCC-------HHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-------------CC
Q 016991           88 LEFVTGGELFDKIVHQGRLL-------ENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-------------GN  147 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~-------e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-------------~~  147 (379)
                      ||||. |+|.+++.......       +..+..++.||+.||+|||++||+||||||+|||++.+             +.
T Consensus        88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~  166 (434)
T 2rio_A           88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR  166 (434)
T ss_dssp             ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred             EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceE
Confidence            99995 69999998654332       23456799999999999999999999999999999754             47


Q ss_pred             eEEeeeccccCCCCCcc----cccccccCCCCCchhhhcc------CCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChH
Q 016991          148 LKVSDFGLSALPQQGVE----LLHTTCGTPNYVAPEVLSN------RGYDGSAADVWSCGVILFVLMA-GYLPFGETDLP  216 (379)
Q Consensus       148 lkl~DfGl~~~~~~~~~----~~~~~~gt~~y~aPE~l~~------~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~  216 (379)
                      +||+|||++........    .....+||+.|+|||++.+      ....+.++|||||||++|+|++ |..||.+....
T Consensus       167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~  246 (434)
T 2rio_A          167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR  246 (434)
T ss_dssp             EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred             EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence            99999999986554321    2345689999999999965      2344689999999999999998 99999765543


Q ss_pred             HHHHHHHhcccCCCC-------CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          217 TLYKKINAAEFSCPF-------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       217 ~~~~~i~~~~~~~p~-------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .  ..+....+..+.       .+++++.+||.+||+.||.+|||+.++++||||..
T Consensus       247 ~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          247 E--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             H--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             H--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            3  223333332221       24578999999999999999999999999999964

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.9e-46  Score=369.84  Aligned_cols=247  Identities=23%  Similarity=0.361  Sum_probs=209.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+.. +..||||++......    .+.+.+|+.+|+.++||||+++++++.. +..|+
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i  255 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI  255 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence            35689999999999999999999975 467999999764322    3578899999999999999999999876 67899


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||+++|+|.+++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence            99999999999999743  569999999999999999999999999999999999999999999999999997654321 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+..+....+..+ ....|..+++.+.+||
T Consensus       336 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  414 (452)
T 1fmk_A          336 TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM  414 (452)
T ss_dssp             -------CCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred             ecccCCcccccccCHhHHhcCCC-CccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            11233456788999999987666 489999999999999999 99999988877777766554 4566788999999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||.+|||++++++
T Consensus       415 ~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          415 CQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHH
Confidence            9999999999999999887

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.5e-46  Score=353.26  Aligned_cols=252  Identities=26%  Similarity=0.357  Sum_probs=208.6

Q ss_pred             ceeccCe-eeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991            5 TRRVAKY-EVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus         5 ~~~~~~y-~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      +..-++| ++++.||+|+||+||++.    +..+|+.||||++....  .....+.+.+|+.+++.++||||+++++++.
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTLYHEHIIKYKGCCE  103 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhCCCcchhhEEEEEe
Confidence            3455667 999999999999998775    44578999999997653  3344577999999999999999999999998


Q ss_pred             e--CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           80 S--RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        80 ~--~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      +  ...+|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus       104 ~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~  182 (318)
T 3lxp_A          104 DAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK  182 (318)
T ss_dssp             ETTTTEEEEEECCCTTCBHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             cCCCceEEEEEecccCCcHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence            7  4689999999999999998876 459999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH---------------HHH
Q 016991          158 LPQQGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP---------------TLY  219 (379)
Q Consensus       158 ~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~---------------~~~  219 (379)
                      .......   ......||+.|+|||++.+..+. .++|||||||++|+|++|..||......               ...
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  261 (318)
T 3lxp_A          183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFY-YASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT  261 (318)
T ss_dssp             ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEE-HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH
T ss_pred             cccccccccccccCCCCCceeeChHHhcCCCCC-cHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH
Confidence            6654322   23345688889999999876664 8999999999999999999999654321               111


Q ss_pred             HHHH-hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          220 KKIN-AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       220 ~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..+. ......|..+++++.+||.+||+.||.+|||++++++
T Consensus       262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            2222 2234567789999999999999999999999999986

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=6.4e-46  Score=346.62  Aligned_cols=247  Identities=24%  Similarity=0.387  Sum_probs=197.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh--CCCCCcceEEEEEEe--
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI--VRHPNIVRLHEVLAS--   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~--l~hp~Iv~l~~~~~~--   80 (379)
                      ....++|++.+.||+|+||+||+|.+  +|+.||||++....      .....+|.+++..  ++||||+++++++..  
T Consensus         4 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            4 RTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD------EKSWFRETELYNTVMLRHENILGFIASDMTSR   75 (301)
T ss_dssp             CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred             ccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc------chhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence            45678999999999999999999988  58999999986532      2445566777666  799999999998653  


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeecCCCCcEEEccCCCeEE
Q 016991           81 --RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH--------SKGVYHRDLKPENLLLDSYGNLKV  150 (379)
Q Consensus        81 --~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH--------~~gi~HrDlkp~NIll~~~~~lkl  150 (379)
                        ....|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||        +.||+||||||+|||++.++.+||
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence              3568999999999999999954 68999999999999999999999        999999999999999999999999


Q ss_pred             eeeccccCCCCCccc----ccccccCCCCCchhhhccCCCC-----CCchhHHHHHHHHHHHHhC----------CCCCC
Q 016991          151 SDFGLSALPQQGVEL----LHTTCGTPNYVAPEVLSNRGYD-----GSAADVWSCGVILFVLMAG----------YLPFG  211 (379)
Q Consensus       151 ~DfGl~~~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~-----~~~~DiwSlGvil~~ll~g----------~~Pf~  211 (379)
                      +|||++.........    ....+||+.|+|||++.+....     +.++|||||||++|+|++|          ..||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            999998654332211    2345899999999999765332     2589999999999999999          88885


Q ss_pred             CCC-----hHHHHHHHHhc--ccCCCC-----CCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          212 ETD-----LPTLYKKINAA--EFSCPF-----WFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       212 ~~~-----~~~~~~~i~~~--~~~~p~-----~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ...     .......+...  ....|.     ..++++.+||.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            432     12222222211  122222     14567999999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.7e-46  Score=356.98  Aligned_cols=242  Identities=14%  Similarity=0.164  Sum_probs=201.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCC--------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcce-------
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRET--------GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVR-------   73 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~--------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~-------   73 (379)
                      ++|++.+.||+|+||.||+|.+..+        ++.||||++...        +.+.+|+.+++.++||||++       
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence            7999999999999999999999874        899999998653        35778999999999999887       


Q ss_pred             --------EEEEEEe-CCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE
Q 016991           74 --------LHEVLAS-RTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL  142 (379)
Q Consensus        74 --------l~~~~~~-~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll  142 (379)
                              +++++.. ....|+||||+ |++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~  192 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV  192 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEE
T ss_pred             CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE
Confidence                    6777765 78899999999 99999999876  789999999999999999999999999999999999999


Q ss_pred             ccCC--CeEEeeeccccCCCCCcc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Q 016991          143 DSYG--NLKVSDFGLSALPQQGVE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET  213 (379)
Q Consensus       143 ~~~~--~lkl~DfGl~~~~~~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~  213 (379)
                      +.++  .+||+|||++........       .....+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...
T Consensus       193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGP-SRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCC-CchhhHHHHHHHHHHHHhCCCCcccC
Confidence            9998  899999999976543211       1234579999999999987665 58999999999999999999999775


Q ss_pred             C--hHHHHHHH---HhcccCCC------CCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          214 D--LPTLYKKI---NAAEFSCP------FWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       214 ~--~~~~~~~i---~~~~~~~p------~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .  ........   ......++      ..+++++.+||.+||+.||.+|||++++++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          272 LPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             TTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            3  22332222   22222221      146899999999999999999999999887

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.6e-46  Score=355.25  Aligned_cols=253  Identities=22%  Similarity=0.264  Sum_probs=205.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+. +|+.||||++........  ...+.+|+.+++.++||||+++++++...+..++
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l  104 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGG--ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL  104 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----C--CCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEE
T ss_pred             HhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchH--HHHHHHHHHHHHhccCCCccceEEEEecCCceEE
Confidence            3568999999999999999999854 689999999876542221  2368899999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           87 ILEFVTGGELFDKIVHQG----RLLENDCRRYFQQLIDAVAHCHSK---GVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~----~l~e~~~~~~~~qil~~l~ylH~~---gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      ||||+++|+|.+++....    .+++..+..++.||+.||.|||++   ||+||||||+|||++.++.+||+|||++...
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  184 (326)
T 3uim_A          105 VYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM  184 (326)
T ss_dssp             EEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred             EEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccccc
Confidence            999999999999997643    489999999999999999999999   9999999999999999999999999999765


Q ss_pred             CCC-cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHh---c-c---
Q 016991          160 QQG-VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGET-----DLPTLYKKINA---A-E---  226 (379)
Q Consensus       160 ~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~-----~~~~~~~~i~~---~-~---  226 (379)
                      ... .......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...     ........+..   . .   
T Consensus       185 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (326)
T 3uim_A          185 DYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA  263 (326)
T ss_dssp             CSSSSCEECCCCSCGGGCCHHHHHHSEE-CHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTT
T ss_pred             CcccccccccccCCcCccCHHHhccCCC-CccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhh
Confidence            442 233445569999999999977665 58999999999999999999999521     11111111110   0 0   


Q ss_pred             -------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcc
Q 016991          227 -------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       227 -------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                             ...+...++.+.+++.+||+.||.+|||+.++++|-+
T Consensus       264 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          264 LVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             SSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             hcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                   0111223467899999999999999999999999754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.6e-46  Score=352.01  Aligned_cols=249  Identities=29%  Similarity=0.408  Sum_probs=188.4

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEE--------
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLA--------   79 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~--------   79 (379)
                      .+|++.+.||+|+||.||+|.+..+|+.||||++...   .....+.+.+|+.+++.+. ||||+++++++.        
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            4899999999999999999999999999999998554   2334567889999999996 999999999984        


Q ss_pred             eCCeEEEEEeccCCCChHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEccCCCeEEeeec
Q 016991           80 SRTKVYIILEFVTGGELFDKIVH---QGRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLDSYGNLKVSDFG  154 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~---~~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~~~~~lkl~DfG  154 (379)
                      .....+++|||+. |+|.+++..   .+.+++..++.++.||+.||.|||+.|  |+||||||+|||++.++.+||+|||
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg  183 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG  183 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence            4456899999995 688888865   467999999999999999999999999  9999999999999999999999999


Q ss_pred             cccCCCCCcc------------cccccccCCCCCchhhhc--cCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 016991          155 LSALPQQGVE------------LLHTTCGTPNYVAPEVLS--NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK  220 (379)
Q Consensus       155 l~~~~~~~~~------------~~~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~  220 (379)
                      ++........            .....+||+.|+|||++.  .....+.++|||||||++|+|++|..||..........
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  263 (337)
T 3ll6_A          184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN  263 (337)
T ss_dssp             TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred             cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc
Confidence            9976544211            112556999999999983  22233589999999999999999999997655433222


Q ss_pred             HHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcc
Q 016991          221 KINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPW  263 (379)
Q Consensus       221 ~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~  263 (379)
                      .  ......+...++.+.+||.+||+.||.+|||+.++++|-+
T Consensus       264 ~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          264 G--KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ----CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             C--cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            1  1223344567889999999999999999999999999754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=347.05  Aligned_cols=243  Identities=29%  Similarity=0.433  Sum_probs=199.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ...++|++.+.||+|+||.||+|.+.  ++.||||++...     ...+.+.+|+.+++.++||||+++++++.+  ..|
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~   75 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVC   75 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTE
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcE
Confidence            45679999999999999999999885  789999998543     234678899999999999999999998774  489


Q ss_pred             EEEeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCceeecCCCCcEEEccCCC-eEEeeeccccC
Q 016991           86 IILEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHS---KGVYHRDLKPENLLLDSYGN-LKVSDFGLSAL  158 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~---~gi~HrDlkp~NIll~~~~~-lkl~DfGl~~~  158 (379)
                      +||||++|++|.+++....   .+++..+..++.|++.||.|||+   +||+||||||+||+++.++. +||+|||++..
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~  155 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD  155 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred             EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence            9999999999999998655   37889999999999999999999   89999999999999998887 79999999865


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHH-HhcccCCCCCCCH
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP--TLYKKI-NAAEFSCPFWFST  235 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~--~~~~~i-~~~~~~~p~~~s~  235 (379)
                      ....   .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||......  .....+ .......+..+++
T Consensus       156 ~~~~---~~~~~gt~~y~aPE~~~~~~~-~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (307)
T 2eva_A          156 IQTH---MTNNKGSAAWMAPEVFEGSNY-SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK  231 (307)
T ss_dssp             ------------CCTTSSCHHHHTCCCC-CTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCH
T ss_pred             cccc---cccCCCCCceEChhhhCCCCC-CcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCH
Confidence            4332   234569999999999987665 58999999999999999999999764332  222222 2233455667899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+.++|.+||+.||.+|||+++++++
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            99999999999999999999999873

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.7e-46  Score=360.17  Aligned_cols=250  Identities=24%  Similarity=0.296  Sum_probs=202.1

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA-SRTKV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~-~~~~~   84 (379)
                      ..|++.+.||+|+||.||+|.+..++   ..||+|.+....  .....+.+.+|+.+++.++||||+++++++. ..+..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  166 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  166 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence            35889999999999999999875433   468999886532  3345678999999999999999999999865 45688


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus       167 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~  246 (373)
T 3c1x_A          167 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  246 (373)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence            9999999999999999765 458899999999999999999999999999999999999999999999999987543321


Q ss_pred             ----ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhH
Q 016991          164 ----ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGA  237 (379)
Q Consensus       164 ----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~  237 (379)
                          .......|++.|+|||++.+..+ +.++|||||||++|+|++ |.+||.+.+.......+... ....|..+++++
T Consensus       247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~~~~~l  325 (373)
T 3c1x_A          247 FDSVHNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPL  325 (373)
T ss_dssp             -----------CCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTTCCHHH
T ss_pred             cccccccCCCCCcccccChHHhcCCCC-CcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHH
Confidence                11233457788999999987766 489999999999999999 78999877666555555444 345677899999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .++|.+||+.||.+|||+.+++++
T Consensus       326 ~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          326 YEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=1.4e-45  Score=378.84  Aligned_cols=243  Identities=21%  Similarity=0.340  Sum_probs=208.4

Q ss_pred             eeecccCCeEEEEEEE--CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEGTFAKVRFAQN--RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      +.||+|+||.||+|.+  ..++..||||++.... ......+.+.+|+.+|+.++|||||++++++.. +..++||||++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~  452 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE  452 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence            4799999999999954  4667899999997643 233345789999999999999999999999975 55899999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc---ccccc
Q 016991           93 GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE---LLHTT  169 (379)
Q Consensus        93 gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~---~~~~~  169 (379)
                      +|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........   .....
T Consensus       453 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~  532 (635)
T 4fl3_A          453 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  532 (635)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----------
T ss_pred             CCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCC
Confidence            999999999888999999999999999999999999999999999999999999999999999876544221   12334


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHHHHHccCC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~  247 (379)
                      .||+.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+.......+.... ...|..+++++.+||.+||+.
T Consensus       533 ~~t~~y~APE~~~~~~~-~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~  611 (635)
T 4fl3_A          533 KWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY  611 (635)
T ss_dssp             --CGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCceeeeChhhhcCCCC-CcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            56788999999987776 489999999999999998 999999988887777776553 567888999999999999999


Q ss_pred             CCCCCCChHhHhc
Q 016991          248 NPKTRIRIEGIRK  260 (379)
Q Consensus       248 dP~~R~s~~~il~  260 (379)
                      ||.+|||++++++
T Consensus       612 dP~~RPs~~~l~~  624 (635)
T 4fl3_A          612 DVENRPGFAAVEL  624 (635)
T ss_dssp             STTTSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999999876

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.1e-45  Score=346.47  Aligned_cols=248  Identities=24%  Similarity=0.339  Sum_probs=203.5

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccc-cchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      .|..++.||+|+||.||+|.+  ++..||||++..... ......+.+.+|+.+++.++||||+++++++...+..|+||
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  109 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY  109 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence            345569999999999999986  588999999875432 23345678999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc--
Q 016991           89 EFVTGGELFDKIVH---QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV--  163 (379)
Q Consensus        89 E~~~gg~L~~~l~~---~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~--  163 (379)
                      ||++|++|.+++..   ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......  
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  189 (307)
T 2nru_A          110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT  189 (307)
T ss_dssp             ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC
T ss_pred             EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc
Confidence            99999999999874   3469999999999999999999999999999999999999999999999999987654321  


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhccc-----------C
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT----LYKKINAAEF-----------S  228 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~----~~~~i~~~~~-----------~  228 (379)
                      ......+||+.|+|||++.+.  .+.++|||||||++|+|++|..||.......    ....+.....           .
T Consensus       190 ~~~~~~~g~~~y~aPE~~~~~--~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (307)
T 2nru_A          190 VMTSRIVGTTAYMAPEALRGE--ITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMND  267 (307)
T ss_dssp             EECSSCCSCGGGCCHHHHTTE--ECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSC
T ss_pred             ccccccCCCcCcCChHHhcCC--CCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccc
Confidence            223345799999999998653  3589999999999999999999997654322    2222222111           1


Q ss_pred             CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          229 CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       229 ~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+...++.+.+++.+||+.||.+|||+.+++++
T Consensus       268 ~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          268 ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            222345678999999999999999999999874

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.8e-45  Score=374.48  Aligned_cols=248  Identities=25%  Similarity=0.366  Sum_probs=208.4

Q ss_pred             cCeeeee-eecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            9 AKYEVGR-TIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         9 ~~y~~~~-~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      +++.+.+ .||+|+||.||+|.+.  .++..||||++....  .....+.+.+|+.+|+.++||||+++++++.. +.+|
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~  411 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM  411 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeE
Confidence            3455665 8999999999999875  356689999997643  22245789999999999999999999999976 5699


Q ss_pred             EEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +||||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus       412 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~  491 (613)
T 2ozo_A          412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS  491 (613)
T ss_dssp             EEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred             EEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence            999999999999999654 4699999999999999999999999999999999999999999999999999986543221


Q ss_pred             c---ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHH
Q 016991          165 L---LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATS  239 (379)
Q Consensus       165 ~---~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~  239 (379)
                      .   .....+++.|+|||++.+..+ +.++|||||||++|+|++ |..||.+.+..+....+..+. ...|..+++++.+
T Consensus       492 ~~~~~~~~~~~~~y~APE~~~~~~~-~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~  570 (613)
T 2ozo_A          492 YYTARSAGKWPLKWYAPECINFRKF-SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA  570 (613)
T ss_dssp             ----------CCTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred             eeeeccCCCCccceeCHhhhcCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH
Confidence            1   123345689999999987766 489999999999999998 999999988888777776553 5678889999999


Q ss_pred             HHHHccCCCCCCCCChHhHhc
Q 016991          240 LIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~  260 (379)
                      ||.+||+.||.+|||+.++++
T Consensus       571 li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          571 LMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999854

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=5.7e-46  Score=357.43  Aligned_cols=243  Identities=15%  Similarity=0.213  Sum_probs=199.0

Q ss_pred             ccCeeeeeeecccCCeEEEEE-----EECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceEEEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFA-----QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR---HPNIVRLHEVLA   79 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a-----~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~   79 (379)
                      -++|++.+.||+|+||+||+|     .+..+++.||||++....      ...+.+|+.+++.++   |+||+++++++.
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence            357999999999999999999     467789999999986532      246778888888887   999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc----------
Q 016991           80 SRTKVYIILEFVTGGELFDKIVH-----QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS----------  144 (379)
Q Consensus        80 ~~~~~~lv~E~~~gg~L~~~l~~-----~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~----------  144 (379)
                      ..+..|+||||++||+|.+++..     ...+++..++.++.||+.||+|||++||+||||||+|||++.          
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence            99999999999999999999974     467999999999999999999999999999999999999998          


Q ss_pred             -CCCeEEeeeccccCCC--CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 016991          145 -YGNLKVSDFGLSALPQ--QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK  221 (379)
Q Consensus       145 -~~~lkl~DfGl~~~~~--~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~  221 (379)
                       ++.+||+|||++....  .........+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.......    
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~elltg~~pf~~~~~~~----  292 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPW-NYQIDYFGVAATVYCMLFGTYMKVKNEGGE----  292 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCB-STHHHHHHHHHHHHHHHHSSCCCEEEETTE----
T ss_pred             ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCC-CccccHHHHHHHHHHHHhCCCccccCCCCc----
Confidence             8999999999996433  12234566789999999999988776 599999999999999999999995432210    


Q ss_pred             HHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          222 INAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       222 i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..........+.++.+.+++..||+.+|.+|++..+.+.+
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          293 CKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             EEECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             eeechhccccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence            0001111122457788999999999999999766555544

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.3e-45  Score=347.76  Aligned_cols=252  Identities=25%  Similarity=0.366  Sum_probs=209.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEE----ECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQ----NRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~----~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ....++|++++.||+|+||.||+|.    +..+|+.||||++...   .....+.+.+|+.+++.++||||+++++++..
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  113 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYS  113 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Confidence            3456789999999999999999998    4678999999998653   23345789999999999999999999999865


Q ss_pred             CC--eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           81 RT--KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        81 ~~--~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      .+  ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus       114 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          114 AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK  193 (326)
T ss_dssp             ----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             cCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchh
Confidence            43  789999999999999999875 469999999999999999999999999999999999999999999999999997


Q ss_pred             CCCCCccc---ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH----------------HH
Q 016991          158 LPQQGVEL---LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP----------------TL  218 (379)
Q Consensus       158 ~~~~~~~~---~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----------------~~  218 (379)
                      ........   .....++..|+|||++.+..+ +.++|||||||++|+|++|..||......                .+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKF-SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  272 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             hccccccccccccCCCCceeEECchhhcCCCC-CchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence            65543221   223457778999999987665 48999999999999999999998643110                11


Q ss_pred             HHHHH-hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          219 YKKIN-AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       219 ~~~i~-~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ...+. ......|..+++++.+||.+||+.||.+|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          273 IELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            12222 2234567789999999999999999999999999886

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.8e-45  Score=371.32  Aligned_cols=247  Identities=23%  Similarity=0.361  Sum_probs=213.9

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++.+.||+|+||.||+|.+.. +..||||++......    .+.+.+|+.+|+.++||||+++++++.. +.+|+
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l  338 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI  338 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             chhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence            45689999999999999999999975 467999999764422    3578899999999999999999999876 67999


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||+++|+|.+++...  ..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            99999999999999743  569999999999999999999999999999999999999999999999999997654321 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......++..|+|||++....+ +.++|||||||+||+|++ |..||.+.+..+....+... ....|..+++++.+||
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~-~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  497 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRF-TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM  497 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ecccCCcCcccccCHHHhccCCC-CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence            11223456778999999987666 489999999999999999 99999988877777776554 4566788999999999


Q ss_pred             HHccCCCCCCCCChHhHhc
Q 016991          242 HKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||+.||++|||+++|++
T Consensus       498 ~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          498 CQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHH
Confidence            9999999999999999887

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=9.6e-47  Score=384.80  Aligned_cols=258  Identities=27%  Similarity=0.390  Sum_probs=207.8

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----   80 (379)
                      +...++|++.+.||+|+||.||+|.+..+|+.||||++....  .....+.+.+|+.+++.++||||+++++++..    
T Consensus        10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~   87 (676)
T 3qa8_A           10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKL   87 (676)
T ss_dssp             -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCC
T ss_pred             CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccc
Confidence            456799999999999999999999999999999999986542  33455778999999999999999999998765    


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC---eEEee
Q 016991           81 --RTKVYIILEFVTGGELFDKIVHQG---RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN---LKVSD  152 (379)
Q Consensus        81 --~~~~~lv~E~~~gg~L~~~l~~~~---~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~---lkl~D  152 (379)
                        .+..|+||||++||+|.+++....   .+++..++.++.||+.||.|||+.||+||||||+||+++.++.   +||+|
T Consensus        88 ~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~D  167 (676)
T 3qa8_A           88 APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIID  167 (676)
T ss_dssp             CTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred             cCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcc
Confidence              678899999999999999998654   6999999999999999999999999999999999999997775   99999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHH---------HHH-
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLY---------KKI-  222 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~---------~~i-  222 (379)
                      ||++...... ......+||+.|+|||++.+..+ +.++||||+||++|+|++|..||.........         ..+ 
T Consensus       168 FG~a~~~~~~-~~~~~~~gt~~Y~APE~l~~~~~-s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~  245 (676)
T 3qa8_A          168 LGYAKELDQG-ELCTEFVGTLQYLAPELLEQKKY-TVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV  245 (676)
T ss_dssp             CCCCCBTTSC-CCCCCCCSCCTTCSSCSSCCSCC-STTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred             cccccccccc-cccccccCCcccCChHHhccCCC-CchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence            9999866543 23355689999999999987666 58999999999999999999999765332111         000 


Q ss_pred             ----Hhccc------C----CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          223 ----NAAEF------S----CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       223 ----~~~~~------~----~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                          ..+..      .    .+..+++.+.+||.+||..||.+|||++++++||||+.
T Consensus       246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence                00111      1    11225688999999999999999999999999999975

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.4e-45  Score=347.10  Aligned_cols=247  Identities=25%  Similarity=0.387  Sum_probs=196.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh--CCCCCcceEEEEEEeC--
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI--VRHPNIVRLHEVLASR--   81 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~--l~hp~Iv~l~~~~~~~--   81 (379)
                      ...++|++.+.||+|+||.||+|.+.  |+.||||++....      .....+|..++..  ++||||+++++++...  
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~  105 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKGTG  105 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence            34578999999999999999999985  8999999985432      1334445555544  4899999999999877  


Q ss_pred             --CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeecCCCCcEEEccCCCeEEe
Q 016991           82 --TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK--------GVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~--------gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                        ...|+||||+++|+|.+++.. ..+++..++.++.|++.||.|||++        ||+||||||+|||++.++.+||+
T Consensus       106 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~  184 (337)
T 3mdy_A          106 SWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA  184 (337)
T ss_dssp             GGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred             CCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence              789999999999999999965 5799999999999999999999999        99999999999999999999999


Q ss_pred             eeccccCCCCCccc----ccccccCCCCCchhhhccCCCCCC-----chhHHHHHHHHHHHHhC----------CCCCCC
Q 016991          152 DFGLSALPQQGVEL----LHTTCGTPNYVAPEVLSNRGYDGS-----AADVWSCGVILFVLMAG----------YLPFGE  212 (379)
Q Consensus       152 DfGl~~~~~~~~~~----~~~~~gt~~y~aPE~l~~~~~~~~-----~~DiwSlGvil~~ll~g----------~~Pf~~  212 (379)
                      |||++.........    ....+||+.|+|||++.+..+...     ++|||||||++|+|++|          ..||..
T Consensus       185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence            99998654432211    235689999999999977655422     39999999999999999          777754


Q ss_pred             CC-----hHHHHHHHHhc--ccCCCC-----CCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          213 TD-----LPTLYKKINAA--EFSCPF-----WFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       213 ~~-----~~~~~~~i~~~--~~~~p~-----~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ..     .......+...  ....|.     .+++++.+||.+||+.||.+|||+.++++|
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          265 LVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            32     12222222222  222332     345679999999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=8.9e-45  Score=374.16  Aligned_cols=251  Identities=28%  Similarity=0.393  Sum_probs=213.2

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCC---CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~---~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|++++.||+|+||.||+|.+..+   +..||||.+....  .....+.+.+|+.+++.++||||+++++++. .+
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~  463 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN  463 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence            3457899999999999999999998654   4579999876532  3345577999999999999999999999985 46


Q ss_pred             eEEEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      ..|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            6899999999999999997654 689999999999999999999999999999999999999999999999999986544


Q ss_pred             Cc-ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHH
Q 016991          162 GV-ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGAT  238 (379)
Q Consensus       162 ~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~  238 (379)
                      .. .......|++.|+|||++.+..+ +.++||||+||++|+|++ |..||.+.+.......+... ....|..+++.+.
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~  622 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRF-TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY  622 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCCHHHH
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCC-CchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCccccHHHH
Confidence            22 12233457789999999987766 589999999999999997 99999998887777776554 3567888999999


Q ss_pred             HHHHHccCCCCCCCCChHhHhc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +||.+||+.||.+|||+.++++
T Consensus       623 ~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          623 SLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999999999999886

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=347.80  Aligned_cols=251  Identities=21%  Similarity=0.317  Sum_probs=208.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ....++|++++.||+|+||.||+|.+..   .||+|++....... ...+.+.+|+.+++.++||||+++++++.+.+..
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~  104 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNE-DQLKAFKREVMAYRQTRHENVVLFMGACMSPPHL  104 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCC-CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCE
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCH-HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCce
Confidence            3456899999999999999999999853   59999987543222 2234577899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC--
Q 016991           85 YIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ--  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~--  161 (379)
                      ++||||++|++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+||+++ ++.+||+|||++.....  
T Consensus       105 ~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          105 AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred             EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence            99999999999999997654 699999999999999999999999999999999999998 68999999999765432  


Q ss_pred             ---CcccccccccCCCCCchhhhccC--------CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC-
Q 016991          162 ---GVELLHTTCGTPNYVAPEVLSNR--------GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-  229 (379)
Q Consensus       162 ---~~~~~~~~~gt~~y~aPE~l~~~--------~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-  229 (379)
                         .........|++.|+|||++...        ...+.++|||||||++|+|++|..||...+.......+....... 
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  263 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL  263 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCC
T ss_pred             ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCC
Confidence               11223455699999999999652        233589999999999999999999999888777776665554322 


Q ss_pred             -CCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          230 -PFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       230 -p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                       +..+++++.++|.+||..||.+|||+.++++
T Consensus       264 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence             2357899999999999999999999999987

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=3.6e-44  Score=356.77  Aligned_cols=248  Identities=23%  Similarity=0.314  Sum_probs=207.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLHEVLASRTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~~~~~   84 (379)
                      ...++|++++.||+|+||.||+|.+..+|+.||||++......     ..+.+|+.+++.++| ++|..+..+....+..
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence            4567999999999999999999999999999999988654322     347789999999987 5666677777888999


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE---ccCCCeEEeeeccccCCC
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL---DSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll---~~~~~lkl~DfGl~~~~~  160 (379)
                      |+||||+ +++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            9999999 9999999975 5689999999999999999999999999999999999999   688999999999997654


Q ss_pred             CCcc-------cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhccc---
Q 016991          161 QGVE-------LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEF---  227 (379)
Q Consensus       161 ~~~~-------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~---  227 (379)
                      ....       .....+||+.|+|||++.+..+ +.++|||||||+||+|++|..||.+...   ...+..+.....   
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~  236 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQ-SRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS  236 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCC-ChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc
Confidence            4221       1236689999999999988766 5899999999999999999999987543   333333333222   


Q ss_pred             --CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          228 --SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       228 --~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                        .++..+++++.+||.+||+.||.+||++++|++
T Consensus       237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence              223567999999999999999999999988765

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.9e-47  Score=362.26  Aligned_cols=244  Identities=20%  Similarity=0.251  Sum_probs=197.0

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc-----chHHHHHHHHHHHHHHhCC---------CCCcc
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-----KHRMVDQIKREISIMKIVR---------HPNIV   72 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~---------hp~Iv   72 (379)
                      ..++|++++.||+|+||+||+|++  +|+.||||++......     .....+.+.+|+.+++.++         ||||+
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             ccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            357899999999999999999998  6899999999875421     2223467889999998885         88888


Q ss_pred             eEEEEEE------------------------------eCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 016991           73 RLHEVLA------------------------------SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV  122 (379)
Q Consensus        73 ~l~~~~~------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l  122 (379)
                      ++.+++.                              ..+.+|+||||+++|++.+.+.+ +.+++..++.++.||+.||
T Consensus        96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHH
T ss_pred             hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence            8877653                              26889999999999987777754 6789999999999999999


Q ss_pred             HHHH-HCCceeecCCCCcEEEccCC--------------------CeEEeeeccccCCCCCcccccccccCCCCCchhhh
Q 016991          123 AHCH-SKGVYHRDLKPENLLLDSYG--------------------NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL  181 (379)
Q Consensus       123 ~ylH-~~gi~HrDlkp~NIll~~~~--------------------~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l  181 (379)
                      .||| ++||+||||||+|||++.++                    .+||+|||++.....     ...+||+.|+|||++
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-----~~~~gt~~y~aPE~~  249 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-----GIVVFCDVSMDEDLF  249 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-----TEEECCCCTTCSGGG
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-----CcEEEeecccChhhh
Confidence            9999 99999999999999999987                    899999999976543     245899999999999


Q ss_pred             ccCCCCCCchhHHHHHHH-HHHHHhCCCCCCCCCh-HHHHHHHHh-cccCC------CCCCCHhHHHHHHHccCCCCCCC
Q 016991          182 SNRGYDGSAADVWSCGVI-LFVLMAGYLPFGETDL-PTLYKKINA-AEFSC------PFWFSTGATSLIHKILDPNPKTR  252 (379)
Q Consensus       182 ~~~~~~~~~~DiwSlGvi-l~~ll~g~~Pf~~~~~-~~~~~~i~~-~~~~~------p~~~s~~~~~li~~~L~~dP~~R  252 (379)
                      .+..  +.++||||+|++ .+++++|..||.+..+ ......+.. .....      +..+|+++.+||.+||+.|    
T Consensus       250 ~g~~--~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d----  323 (336)
T 2vuw_A          250 TGDG--DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS----  323 (336)
T ss_dssp             CCCS--SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred             cCCC--ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC----
Confidence            7655  589999998776 7788899999954322 112222221 11111      1236889999999999977    


Q ss_pred             CChHhHh-cCcccc
Q 016991          253 IRIEGIR-KHPWFR  265 (379)
Q Consensus       253 ~s~~~il-~hp~f~  265 (379)
                       |++|++ +||||+
T Consensus       324 -sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          324 -SATDLLCQHSLFK  336 (336)
T ss_dssp             -SHHHHHHHCGGGC
T ss_pred             -CHHHHHhcCCCcC
Confidence             999999 999995

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.5e-45  Score=348.29  Aligned_cols=254  Identities=20%  Similarity=0.273  Sum_probs=193.1

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHH--HHHHHHHhCCCCCcceEEEEEE--
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK--REISIMKIVRHPNIVRLHEVLA--   79 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~--~Ei~~l~~l~hp~Iv~l~~~~~--   79 (379)
                      ....+++|++++.||+|+||.||+|.+  +++.||||++....      .....  .|+..+..++||||+++++.+.  
T Consensus         8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~   79 (336)
T 3g2f_A            8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERV   79 (336)
T ss_dssp             -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred             CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence            356789999999999999999999977  68999999986532      12233  3444455689999999998653  


Q ss_pred             ---eCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------CceeecCCCCcEEEccCCC
Q 016991           80 ---SRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK---------GVYHRDLKPENLLLDSYGN  147 (379)
Q Consensus        80 ---~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~---------gi~HrDlkp~NIll~~~~~  147 (379)
                         ....+|+||||+++|+|.+++.. ...++..+..++.||+.||.|||+.         ||+||||||+|||++.++.
T Consensus        80 ~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~  158 (336)
T 3g2f_A           80 TADGRMEYLLVMEYYPNGSLXKYLSL-HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT  158 (336)
T ss_dssp             CTTSCEEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred             ccCCCceEEEEEecCCCCcHHHHHhh-cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCc
Confidence               23468999999999999999976 4568999999999999999999999         9999999999999999999


Q ss_pred             eEEeeeccccCCCCC--------cccccccccCCCCCchhhhccCC------CCCCchhHHHHHHHHHHHHhCCCCCCC-
Q 016991          148 LKVSDFGLSALPQQG--------VELLHTTCGTPNYVAPEVLSNRG------YDGSAADVWSCGVILFVLMAGYLPFGE-  212 (379)
Q Consensus       148 lkl~DfGl~~~~~~~--------~~~~~~~~gt~~y~aPE~l~~~~------~~~~~~DiwSlGvil~~ll~g~~Pf~~-  212 (379)
                      +||+|||++......        .......+||+.|+|||++.+..      ..+.++|||||||++|+|++|..||.. 
T Consensus       159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  238 (336)
T 3g2f_A          159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG  238 (336)
T ss_dssp             EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTT
T ss_pred             EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCc
Confidence            999999999754321        12233557999999999997631      224689999999999999999766532 


Q ss_pred             CCh-----------------HHHHHHHHh--cccCCCCC------CCHhHHHHHHHccCCCCCCCCChHhHhc------C
Q 016991          213 TDL-----------------PTLYKKINA--AEFSCPFW------FSTGATSLIHKILDPNPKTRIRIEGIRK------H  261 (379)
Q Consensus       213 ~~~-----------------~~~~~~i~~--~~~~~p~~------~s~~~~~li~~~L~~dP~~R~s~~~il~------h  261 (379)
                      ...                 ......+..  ....+|..      +++++.+||.+||+.||++|||+.++++      +
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             SCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            211                 111111111  12223332      3457999999999999999999999954      5


Q ss_pred             ccccc
Q 016991          262 PWFRK  266 (379)
Q Consensus       262 p~f~~  266 (379)
                      +|-++
T Consensus       319 ~~~~~  323 (336)
T 3g2f_A          319 IWERN  323 (336)
T ss_dssp             CCCC-
T ss_pred             HHHhc
Confidence            66554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=9.2e-46  Score=362.12  Aligned_cols=249  Identities=18%  Similarity=0.204  Sum_probs=195.1

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCc---------ceEE---
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNI---------VRLH---   75 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~I---------v~l~---   75 (379)
                      ..|.+++.||+|+||+||+|.+..+|+.||||++...........+.+.+|+.+++.++| +|.         +...   
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            358899999999999999999999999999999875443333345779999999999987 221         1111   


Q ss_pred             ---------EEEEe-----CCeEEEEEeccCCCChHHHHHh-------cCCCCHHHHHHHHHHHHHHHHHHHHCCceeec
Q 016991           76 ---------EVLAS-----RTKVYIILEFVTGGELFDKIVH-------QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRD  134 (379)
Q Consensus        76 ---------~~~~~-----~~~~~lv~E~~~gg~L~~~l~~-------~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrD  134 (379)
                               .++..     ...++++|+++ +++|.+++..       .+.+++..+..++.||+.||.|||++||+|||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD  236 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY  236 (413)
T ss_dssp             ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence                     11111     23467778876 7899888841       23477888899999999999999999999999


Q ss_pred             CCCCcEEEccCCCeEEeeeccccCCCCCcccccccccCCCCCchhhhc---------cCCCCCCchhHHHHHHHHHHHHh
Q 016991          135 LKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS---------NRGYDGSAADVWSCGVILFVLMA  205 (379)
Q Consensus       135 lkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~---------~~~~~~~~~DiwSlGvil~~ll~  205 (379)
                      |||+|||++.++.+||+|||++......   ....+| +.|+|||++.         .....+.++|||||||++|+|++
T Consensus       237 iKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt  312 (413)
T 3dzo_A          237 LRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC  312 (413)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred             cccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence            9999999999999999999998754432   456788 9999999993         22223579999999999999999


Q ss_pred             CCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          206 GYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       206 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      |+.||.+.+.......+    +.....+|+++.+||.+||+.||.+|||+.++++||||+.
T Consensus       313 g~~Pf~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          313 ADLPNTDDAALGGSEWI----FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             SSCCCCTTGGGSCSGGG----GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             CCCCCCCcchhhhHHHH----HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            99999876654333322    2223457899999999999999999999999999999974

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=4.9e-44  Score=339.99  Aligned_cols=246  Identities=22%  Similarity=0.345  Sum_probs=202.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC--
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI--VRHPNIVRLHEVLASRT--   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~--l~hp~Iv~l~~~~~~~~--   82 (379)
                      ..++|++.+.||+|+||.||+|.+  +|+.||||++....      ...+.+|+.+++.  ++||||+++++++....  
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~  111 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE------ERSWFREAEIYQTVMLRHENILGFIAADNKDNGT  111 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred             ccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh------HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence            347899999999999999999998  48999999986432      2567788888887  78999999999998776  


Q ss_pred             --eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeecCCCCcEEEccCCCeEEee
Q 016991           83 --KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH--------SKGVYHRDLKPENLLLDSYGNLKVSD  152 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH--------~~gi~HrDlkp~NIll~~~~~lkl~D  152 (379)
                        ..|+||||+++|+|.+++.. ..+++..++.++.||+.||.|||        +.||+||||||+|||++.++.+||+|
T Consensus       112 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~D  190 (342)
T 1b6c_B          112 WTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  190 (342)
T ss_dssp             CCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECC
T ss_pred             cceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEE
Confidence              89999999999999999976 57999999999999999999999        89999999999999999999999999


Q ss_pred             eccccCCCCCcc----cccccccCCCCCchhhhccCCCC-----CCchhHHHHHHHHHHHHhC----------CCCCCCC
Q 016991          153 FGLSALPQQGVE----LLHTTCGTPNYVAPEVLSNRGYD-----GSAADVWSCGVILFVLMAG----------YLPFGET  213 (379)
Q Consensus       153 fGl~~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~~-----~~~~DiwSlGvil~~ll~g----------~~Pf~~~  213 (379)
                      ||++........    .....+||+.|+|||++.+....     +.++|||||||++|+|++|          ..||...
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             CTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             CCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence            999875443221    23455799999999999765322     1579999999999999999          8898654


Q ss_pred             C-----hHHHHHHHHhcc--cCCCCC-----CCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          214 D-----LPTLYKKINAAE--FSCPFW-----FSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       214 ~-----~~~~~~~i~~~~--~~~p~~-----~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .     .......+....  ...|..     .++.+.+||.+||+.||.+|||+.++++|
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          271 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             SCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            2     233444443322  222321     23578899999999999999999999885

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=5.3e-44  Score=332.75  Aligned_cols=224  Identities=14%  Similarity=0.168  Sum_probs=190.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..-++|++.+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.++||||+++++++...+..|
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEE
Confidence            44578999999999999999999999999999999998766555566688999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +||||++|++|.+++.. + ....++..++.||+.||+|||++||+||||||+|||++.+|.+||+++|           
T Consensus       108 lv~e~~~g~~L~~~l~~-~-~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADT-S-PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             EEEECCCEEEHHHHHTT-C-CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred             EEEEecCCCCHHHHHhc-C-CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence            99999999999999854 3 4666788999999999999999999999999999999999999998543           


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhccc----CCCCCCCHhHH
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK---KINAAEF----SCPFWFSTGAT  238 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~---~i~~~~~----~~p~~~s~~~~  238 (379)
                               |++|        .+.++|||||||++|+|++|+.||.+.+......   +......    ..+..+++++.
T Consensus       175 ---------~~~~--------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  237 (286)
T 3uqc_A          175 ---------TMPD--------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS  237 (286)
T ss_dssp             ---------CCTT--------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHH
T ss_pred             ---------ccCC--------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHH
Confidence                     3332        3589999999999999999999998765432110   1111111    12356899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +||.+||+.||.+| |+.++++
T Consensus       238 ~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          238 AVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHHHHCTTSSCC-CHHHHHH
T ss_pred             HHHHHHcccCCccC-CHHHHHH
Confidence            99999999999999 9999987

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.7e-44  Score=374.36  Aligned_cols=245  Identities=24%  Similarity=0.333  Sum_probs=202.6

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECC-CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRE-TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~-~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      +....++|++.+.||+|+||.||+|.+.. +|+.||||++....  .......+.+|+.+++.++||||+++++++...+
T Consensus        75 g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~  152 (681)
T 2pzi_A           75 GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTD  152 (681)
T ss_dssp             TCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred             CCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence            34556899999999999999999999976 78999999986532  3344567889999999999999999999998765


Q ss_pred             e-----EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991           83 K-----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus        83 ~-----~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      .     .|+||||++|++|.+++..  .+++.++..++.||+.||.|||++||+||||||+|||++.+ .+||+|||++.
T Consensus       153 ~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~  229 (681)
T 2pzi_A          153 RHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVS  229 (681)
T ss_dssp             TTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred             CCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccch
Confidence            5     7999999999999887754  79999999999999999999999999999999999999984 99999999987


Q ss_pred             CCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhH
Q 016991          158 LPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGA  237 (379)
Q Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~  237 (379)
                      .....    ...+||+.|+|||++.+. + +.++|||||||++|+|++|.+||.+.......      ........++.+
T Consensus       230 ~~~~~----~~~~gt~~y~aPE~~~~~-~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------~~~~~~~~~~~l  297 (681)
T 2pzi_A          230 RINSF----GYLYGTPGFQAPEIVRTG-P-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------EDDPVLKTYDSY  297 (681)
T ss_dssp             ETTCC----SCCCCCTTTSCTTHHHHC-S-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------TTCHHHHHCHHH
T ss_pred             hcccC----CccCCCccccCHHHHcCC-C-CCceehhhhHHHHHHHHhCCCCCccccccccc------ccccccccCHHH
Confidence            65432    456799999999999764 3 58999999999999999999998653211000      000001246789


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      .+||.+||++||.+||+..+.+.|+|+.
T Consensus       298 ~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          298 GRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            9999999999999999999999999874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=4.8e-38  Score=318.68  Aligned_cols=233  Identities=13%  Similarity=0.111  Sum_probs=164.4

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeeccccc-------chHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEE
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL-------KHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~-------~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++.|++|.+..++....|+.||||++.+....       .+...+++.+|+++|+++ .|+||+++++++++++..||
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            4567888888888888888999999999764311       123446799999999999 69999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||||++|++|.++|...+++++.   +++.||+.||+|||++||+||||||+|||++.+|++||+|||+++.........
T Consensus       320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~  396 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP  396 (569)
T ss_dssp             EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS
T ss_pred             EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc
Confidence            99999999999999998888865   488999999999999999999999999999999999999999998776655566


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccC
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  246 (379)
                      .+.|||+.|+|||++.+..  ..++|+||+|++++++.++..||        ...+..    .|.. ...+..+...++.
T Consensus       397 ~t~vGTp~YmAPE~l~g~~--~~~~d~~s~g~~~~~l~~~~~~~--------~~~l~~----~~~~-~~~~~~l~~~l~~  461 (569)
T 4azs_A          397 TNLVQSFFVFVNELFAENK--SWNGFWRSAPVHPFNLPQPWSNW--------LYAVWQ----EPVE-RWNFVLLLALFEK  461 (569)
T ss_dssp             HHHHHHHHHHHHHHC-------------------CCCCTTHHHH--------HHHHHT----SCGG-GCSHHHHHHHHHT
T ss_pred             cCceechhhccHHHhCCCC--CCcccccccccchhhhccccchh--------HHHhhc----CCCC-CCcHHHHHHHHhC
Confidence            7889999999999997642  47899999999988876654443        111111    1111 1124566777778


Q ss_pred             CCCCCCCChHhHhcCcccc
Q 016991          247 PNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       247 ~dP~~R~s~~~il~hp~f~  265 (379)
                      .+|..|+.......++|..
T Consensus       462 ~~~~~~~~~~~~~~~~~~~  480 (569)
T 4azs_A          462 KAKLPSAEQQRGATEQWII  480 (569)
T ss_dssp             GGGSCCGGGSSCCHHHHHH
T ss_pred             CCCCCCCChhhhccchhHH
Confidence            8888888777777777754

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=1.6e-30  Score=261.95  Aligned_cols=185  Identities=19%  Similarity=0.234  Sum_probs=144.7

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch-----HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH-----RMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      ..+.||+|+||+||+|.  ..+..+|+|..........     ...+++.+|+.+++.++||||+++..+....+..|+|
T Consensus       340 ~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             --------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            35689999999999994  4578999998754332222     2245689999999999999999655555577778999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc---
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE---  164 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~---  164 (379)
                      |||++|++|.+++..        +..++.||+.||.|||++||+||||||+|||++.  ++||+|||++........   
T Consensus       418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~  487 (540)
T 3en9_A          418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV  487 (540)
T ss_dssp             EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred             EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence            999999999998865        6689999999999999999999999999999998  999999999987655322   


Q ss_pred             ----cccccccCCCCCchhhhcc--CCCCCCchhHHHHHHHHHHHHhCCCCC
Q 016991          165 ----LLHTTCGTPNYVAPEVLSN--RGYDGSAADVWSCGVILFVLMAGYLPF  210 (379)
Q Consensus       165 ----~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlGvil~~ll~g~~Pf  210 (379)
                          ...+.+||+.|+|||++..  .+|. ..+|+||..+-..+...++-+|
T Consensus       488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~-~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          488 DLIVFKKAVLSTHHEKFDEIWERFLEGYK-SVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHCGGGHHHHHHHHHHHHH-HHCTTHHHHHHHHHHHHTCSCC
T ss_pred             chhhhhhhhcCCCCcCCHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHhcccc
Confidence                1246789999999999976  4553 6789999998888877776665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.94  E-value=2.5e-27  Score=219.75  Aligned_cols=145  Identities=18%  Similarity=0.258  Sum_probs=116.7

Q ss_pred             eeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---------------HHHHHHHHHHHHHHhCCCCCcceEEE
Q 016991           12 EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---------------RMVDQIKREISIMKIVRHPNIVRLHE   76 (379)
Q Consensus        12 ~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---------------~~~~~~~~Ei~~l~~l~hp~Iv~l~~   76 (379)
                      .+++.||+|+||.||+|.+ .+|+.||||++........               .....+.+|+.+|+.++  | +++.+
T Consensus        93 ~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~  168 (282)
T 1zar_A           93 AIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK  168 (282)
T ss_dssp             EEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred             EecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence            3449999999999999999 8899999999965321110               13467899999999999  4 55555


Q ss_pred             EEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           77 VLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        77 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      ++.. +..|+||||++|++|.+ +      .......++.||+.||.|||++||+||||||+|||++ +|.+||+|||++
T Consensus       169 ~~~~-~~~~lvmE~~~g~~L~~-l------~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a  239 (282)
T 1zar_A          169 VYAW-EGNAVLMELIDAKELYR-V------RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQS  239 (282)
T ss_dssp             EEEE-ETTEEEEECCCCEEGGG-C------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred             EEec-cceEEEEEecCCCcHHH-c------chhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCC
Confidence            5544 55699999999999987 3      1234567999999999999999999999999999999 999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhc
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLS  182 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~  182 (379)
                      .             .+..+.|||++.
T Consensus       240 ~-------------~~~~~~a~e~l~  252 (282)
T 1zar_A          240 V-------------EVGEEGWREILE  252 (282)
T ss_dssp             E-------------ETTSTTHHHHHH
T ss_pred             e-------------ECCCCCHHHHHH
Confidence            5             344678999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.88  E-value=4.6e-23  Score=188.47  Aligned_cols=140  Identities=19%  Similarity=0.255  Sum_probs=109.7

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcE--EEEEEeeccccc---------------------chHHHHHHHHHHHHHHhCC
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGES--VAMKVLAKSTIL---------------------KHRMVDQIKREISIMKIVR   67 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~--vaiK~i~~~~~~---------------------~~~~~~~~~~Ei~~l~~l~   67 (379)
                      |++.+.||+|+||.||+|.+..+|+.  ||||++......                     .......+.+|+.+|+.++
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78899999999999999999778999  999997543211                     0112246889999999998


Q ss_pred             CCCc--ceEEEEEEeCCeEEEEEeccCC-C----ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-HCCceeecCCCCc
Q 016991           68 HPNI--VRLHEVLASRTKVYIILEFVTG-G----ELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH-SKGVYHRDLKPEN  139 (379)
Q Consensus        68 hp~I--v~l~~~~~~~~~~~lv~E~~~g-g----~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH-~~gi~HrDlkp~N  139 (379)
                      |++|  ..+++.    +..++||||+.+ |    +|.+....   .++..+..++.||+.||.||| +.||+||||||+|
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N  201 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN  201 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH
Confidence            8764  444432    356899999932 3    66655432   345678899999999999999 9999999999999


Q ss_pred             EEEccCCCeEEeeeccccCC
Q 016991          140 LLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus       140 Ill~~~~~lkl~DfGl~~~~  159 (379)
                      ||++.  .++|+|||+|...
T Consensus       202 ILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          202 IMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EEESS--SEEECCCTTCEET
T ss_pred             EEEcC--cEEEEECcccccC
Confidence            99998  9999999998643

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.80  E-value=9.4e-20  Score=174.29  Aligned_cols=139  Identities=18%  Similarity=0.231  Sum_probs=102.5

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc---------------chHH----HHHHHHHHHHHHhCCCCCc
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL---------------KHRM----VDQIKREISIMKIVRHPNI   71 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~---------------~~~~----~~~~~~Ei~~l~~l~hp~I   71 (379)
                      |++++.||.|++|.||+|.+. +|+.||||+++.....               ....    .-...+|...|.++.+.++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            899999999999999999985 6999999997542110               0000    1123567888888866554


Q ss_pred             ceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCC----
Q 016991           72 VRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGN----  147 (379)
Q Consensus        72 v~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~----  147 (379)
                      .-..-+....  .++||||++|++|....      ....+..++.||+.+|.|||+.||+||||||.|||++++|.    
T Consensus       176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~  247 (397)
T 4gyi_A          176 PVPEPIAQSR--HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDP  247 (397)
T ss_dssp             SCCCEEEEET--TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCT
T ss_pred             CCCeeeeccC--ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccc
Confidence            3222222222  37999999998885432      22345678999999999999999999999999999988773    


Q ss_pred             ------eEEeeeccccC
Q 016991          148 ------LKVSDFGLSAL  158 (379)
Q Consensus       148 ------lkl~DfGl~~~  158 (379)
                            +.|+||+.+..
T Consensus       248 ~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          248 SSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             TSEEEEEEECCCTTCEE
T ss_pred             cccccceEEEEeCCccc
Confidence                  89999997653

>2ehb_D CBL-interacting serine/threonine-protein kinase 2; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana}

Probab=99.73  E-value=2.4e-18  Score=140.63  Aligned_cols=72  Identities=71%  Similarity=1.022  Sum_probs=66.3

Q ss_pred             CCccccccceeccCcCCCchhhhhhhhhccccccceeecCCHHHHHHHHHHHHHhCCcEEEEecceEEEeec
Q 016991          306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNYKVCLVLI  377 (379)
Q Consensus       306 ~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~rf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  377 (379)
                      .|..+|||++|++|+|+|||+||+..+..++|+|||+|+.||++|+++||++|+++||+|++++++|+|++.
T Consensus         3 ~p~~lNAFdiIs~S~g~dLSgLFe~~~~~~~r~tRF~s~~~a~~ii~klEe~a~~lg~~V~kk~~~vkl~~~   74 (143)
T 2ehb_D            3 GPLMMNAFEMITLSQGLNLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSMGFKSHTRNFKTRLEGL   74 (143)
T ss_dssp             CCEECCHHHHHTTCTTTCGGGGGCSCCCSCCCCCEEEECSCHHHHHHHHHHHHHHTTEEEEESSSEEEEEEC
T ss_pred             CccccCHHHHHHHCcCCCchhhhccccccccccceEEeCCCHHHHHHHHHHHHHhcCcEEEEcCcEEEEEEe
Confidence            577799999999999999999997655457899999999999999999999999999999999999999874

>2zfd_B Putative uncharacterized protein T20L15_90; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana}

Probab=99.66  E-value=1.1e-16  Score=127.56  Aligned_cols=64  Identities=33%  Similarity=0.509  Sum_probs=56.8

Q ss_pred             CCccccccceeccCcCCCchhhhhhhhhccccccceeecCCHHHHHHHHHHHHHhCCcEEEEecc
Q 016991          306 GPLLMNAFEMITLSQGLNLAALFDRRQDYVKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTRNY  370 (379)
Q Consensus       306 ~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~~~rf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  370 (379)
                      +|..+|||++|++|+|+|||+||++.+ ..+|+|||+|+.||++|+++||++|+++||+|+++++
T Consensus         2 ~~~~lNAFdiIs~S~g~dLSgLFe~~~-~~~r~tRF~S~~~a~~ii~klEe~a~~lg~~v~kk~~   65 (123)
T 2zfd_B            2 GARRMNAFDIISGSPGFNLSGLFGDAR-KYDRVERFVSAWTAERVVERLEEIVSAENLTVAKKET   65 (123)
T ss_dssp             --CCCCHHHHHHTSTTSSSGGGGGGGC-SSCCCEEEEESSCHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred             CcccccHHHHHHHCcCCCchHhcCccc-ccccceEEEeCCCHHHHHHHHHHHHHHCCCEEEEcCC
Confidence            677899999999999999999997632 3478999999999999999999999999999998876

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.49  E-value=1.9e-13  Score=124.34  Aligned_cols=141  Identities=15%  Similarity=0.108  Sum_probs=113.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~   85 (379)
                      .++.|++...+|.|+.+.||++...  |..+++|+........   ...+.+|+.+++.+. +..+.+++++....+..|
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence            4678999999999999999999753  6899999986532111   235889999999885 677889999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS--------------------------------------  127 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~--------------------------------------  127 (379)
                      +||||++|.+|.+.+.     +......++.++..+|..||+                                      
T Consensus        87 lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            9999999999876521     223345788899999999998                                      


Q ss_pred             ---------------------CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          128 ---------------------KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       128 ---------------------~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                                           .+++|+|++|.||++++++.+.|+||+.+.
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence                                 458999999999999876566799998763

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.33  E-value=2.4e-12  Score=116.34  Aligned_cols=135  Identities=15%  Similarity=0.154  Sum_probs=100.6

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEEEEEeCCeEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHEVLASRTKVY   85 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~~~~~~~~~~   85 (379)
                      +..|.+....+.|..+.||++.. .+|..+++|+.....      ...+.+|+.+++.+.+.+  +.+++.+....+..|
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~   91 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW   91 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred             cCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence            45677755555677799999965 467889999875431      135778999998886544  566888888888899


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC------------------------------------
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG------------------------------------  129 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~g------------------------------------  129 (379)
                      +||||++|.+|.  .   ....   ...++.++...|..||+..                                    
T Consensus        92 ~v~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           92 LLLGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             EEEECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             EEEEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            999999998873  1   1112   2356677777777777643                                    


Q ss_pred             ----------------------ceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          130 ----------------------VYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       130 ----------------------i~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                                            ++|+|++|.||++++++.+.|+|||.+.
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence                                  9999999999999876667799999764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.25  E-value=2e-11  Score=116.26  Aligned_cols=140  Identities=21%  Similarity=0.347  Sum_probs=106.2

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEee--cccccchHHHHHHHHHHHHHHhCC--CCCcceEEEEEEeC---CeEE
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLA--KSTILKHRMVDQIKREISIMKIVR--HPNIVRLHEVLASR---TKVY   85 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~--~~~~~~~~~~~~~~~Ei~~l~~l~--hp~Iv~l~~~~~~~---~~~~   85 (379)
                      -.+.|+.|.++.||++...  +..+++|+..  .....  .....+.+|+.+++.+.  +..+.+++.++.+.   +..|
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~  117 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF  117 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence            4678999999999998764  4688888765  32211  12356889999999987  45678888888766   4589


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS--------------------------------------  127 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~--------------------------------------  127 (379)
                      +||||++|..+.+..  -..++..+...++.++...|..||+                                      
T Consensus       118 ~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (359)
T 3dxp_A          118 YIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP  195 (359)
T ss_dssp             EEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred             EEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence            999999998774321  1346788888999999999999997                                      


Q ss_pred             --------------------CCceeecCCCCcEEEccCCC--eEEeeeccccC
Q 016991          128 --------------------KGVYHRDLKPENLLLDSYGN--LKVSDFGLSAL  158 (379)
Q Consensus       128 --------------------~gi~HrDlkp~NIll~~~~~--lkl~DfGl~~~  158 (379)
                                          .+++|+|++|.||+++.++.  +.|+||+.+..
T Consensus       196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                36899999999999997763  68999998764

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.19  E-value=3.6e-11  Score=111.83  Aligned_cols=184  Identities=16%  Similarity=0.203  Sum_probs=122.6

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCC--cceEEEEEEeCC---eEEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPN--IVRLHEVLASRT---KVYII   87 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~--Iv~l~~~~~~~~---~~~lv   87 (379)
                      ++.++.|..+.||++.     ..+++|+....     .....+.+|..+|+.+. +..  +.+++......+   ..|+|
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v   94 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG   94 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence            4568999999999863     56888975432     34567899999998874 333  344444433332   35899


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS----------------------------------------  127 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~----------------------------------------  127 (379)
                      |++++|.++.+...  ..++..+...++.|+...+..||+                                        
T Consensus        95 m~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           95 FTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             EECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             EcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            99999988865433  357778888888899888888886                                        


Q ss_pred             ------------------CCceeecCCCCcEEEcc--CCCeEEeeeccccCCCCCcccccccccCCCCCchhhh----cc
Q 016991          128 ------------------KGVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL----SN  183 (379)
Q Consensus       128 ------------------~gi~HrDlkp~NIll~~--~~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l----~~  183 (379)
                                        ..++|+|++|.||+++.  .+.+.|+||+.+.......+........ .-..|+..    ..
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~-~~~~~~~~~~~l~~  251 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDD-EEYGMEFVSKILNH  251 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTT-TSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhc-cccCHHHHHHHHHH
Confidence                              23799999999999998  4567899999876533211111110000 00233321    11


Q ss_pred             CCCCC---------CchhHHHHHHHHHHHHhCCCCC
Q 016991          184 RGYDG---------SAADVWSCGVILFVLMAGYLPF  210 (379)
Q Consensus       184 ~~~~~---------~~~DiwSlGvil~~ll~g~~Pf  210 (379)
                      .+...         ...+.|++|.+++.+.+|..+|
T Consensus       252 Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          252 YKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            11110         1268999999999999998876

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.71  E-value=2.1e-07  Score=86.48  Aligned_cols=135  Identities=19%  Similarity=0.246  Sum_probs=95.5

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC---CcceEEEEEE-eCCeEEEEEe
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP---NIVRLHEVLA-SRTKVYIILE   89 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp---~Iv~l~~~~~-~~~~~~lv~E   89 (379)
                      .+.++.|....||+.     |..+++|+...     ......+.+|..+|+.+.+.   .+.+.+.+.. ..+..|++||
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e   93 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR   93 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence            456889999999988     56788897422     23456789999999999753   2556666653 4566789999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-----------------------------------------
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK-----------------------------------------  128 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~-----------------------------------------  128 (379)
                      |++|..+.....  ..++..+...++.|+...|..||+.                                         
T Consensus        94 ~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~  171 (306)
T 3tdw_A           94 KVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY  171 (306)
T ss_dssp             CCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred             ccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence            999988865321  2345555555555555555555542                                         


Q ss_pred             -------------------CceeecCCCCcEEEcc---CCCe-EEeeeccccCCC
Q 016991          129 -------------------GVYHRDLKPENLLLDS---YGNL-KVSDFGLSALPQ  160 (379)
Q Consensus       129 -------------------gi~HrDlkp~NIll~~---~~~l-kl~DfGl~~~~~  160 (379)
                                         .++|+|++|.||+++.   ++.+ .|+||+.+....
T Consensus       172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence                               3599999999999987   4554 899999876543

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.65  E-value=6.5e-07  Score=81.10  Aligned_cols=137  Identities=13%  Similarity=0.179  Sum_probs=97.6

Q ss_pred             CeeeeeeecccCCe-EEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 016991           10 KYEVGRTIGEGTFA-KVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus        10 ~y~~~~~LG~G~~g-~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .|+. +.+..|..| .||+......+..+++|+-...      ....+.+|...|+.+. +--+.+++.+..+.+..|+|
T Consensus        26 g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lv   98 (272)
T 4gkh_A           26 GYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLL   98 (272)
T ss_dssp             TCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred             CCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEE
Confidence            4443 344556555 6899888777888999975432      3456888999998875 33367788888899999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK---------------------------------------  128 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~---------------------------------------  128 (379)
                      ||+++|.++.+.....    ......+..++...|..||+.                                       
T Consensus        99 me~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (272)
T 4gkh_A           99 TTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW  174 (272)
T ss_dssp             EECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred             EEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence            9999998877654331    122234455555555555531                                       


Q ss_pred             -------------------CceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          129 -------------------GVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       129 -------------------gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                                         .++|+|+.|.||+++.++.+-|+||+.+.
T Consensus       175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence                               27999999999999987777799999764

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.44  E-value=5e-07  Score=86.90  Aligned_cols=80  Identities=15%  Similarity=0.176  Sum_probs=50.2

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccc-cch---HHHHHHHHHHHHHHhCCC--C-CcceEEEEEEeCCeEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI-LKH---RMVDQIKREISIMKIVRH--P-NIVRLHEVLASRTKVYI   86 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~-~~~---~~~~~~~~Ei~~l~~l~h--p-~Iv~l~~~~~~~~~~~l   86 (379)
                      .+.||.|..+.||++....++..+++|....... ...   ...+++..|..+++.+..  | .+.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            5789999999999997766678999997643211 000   112456778888887742  3 34455543  3445689


Q ss_pred             EEeccCCCC
Q 016991           87 ILEFVTGGE   95 (379)
Q Consensus        87 v~E~~~gg~   95 (379)
                      |||+++|..
T Consensus       113 vmE~l~g~~  121 (397)
T 2olc_A          113 VMEDLSHLK  121 (397)
T ss_dssp             EECCCTTSE
T ss_pred             EEEeCCCcc
Confidence            999998743

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.22  E-value=8.1e-07  Score=84.00  Aligned_cols=84  Identities=10%  Similarity=0.208  Sum_probs=55.0

Q ss_pred             eeeee-cccCCeEEEEEEEC--C----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC---CCcceEEEEEEeC-
Q 016991           13 VGRTI-GEGTFAKVRFAQNR--E----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH---PNIVRLHEVLASR-   81 (379)
Q Consensus        13 ~~~~L-G~G~~g~V~~a~~~--~----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h---p~Iv~l~~~~~~~-   81 (379)
                      ..+.| +.|..+.+|+....  .    ++..+++|+..............+.+|..+++.+..   -.+.+++.+..+. 
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            34678 88999999988653  1    156888997654320000001346788888887752   3567788777654 


Q ss_pred             --CeEEEEEeccCCCCh
Q 016991           82 --TKVYIILEFVTGGEL   96 (379)
Q Consensus        82 --~~~~lv~E~~~gg~L   96 (379)
                        +..|+||||++|..+
T Consensus       104 ~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             TTSSCEEEEECCCCBCC
T ss_pred             ccCCceEEEEecCCCCh
Confidence              357899999988654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.18  E-value=2.5e-05  Score=72.88  Aligned_cols=134  Identities=13%  Similarity=0.146  Sum_probs=76.5

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----CCCcceEE-E--EEEeCCeEEE
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-----HPNIVRLH-E--VLASRTKVYI   86 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----hp~Iv~l~-~--~~~~~~~~~l   86 (379)
                      +.|+.|..+.||++...  +..+++|+....    .   ..+..|..+++.+.     .|.++... +  +....+..++
T Consensus        38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~  108 (346)
T 2q83_A           38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV  108 (346)
T ss_dssp             EECC----CEEEEEEET--TEEEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred             eeccccccCcEEEEEeC--CCCEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence            45677788999998764  345899988652    1   23334555554442     34444310 0  1234677899


Q ss_pred             EEeccCCCChH--------------HHHHh-cCCC--C-----------HH--------H--------------------
Q 016991           87 ILEFVTGGELF--------------DKIVH-QGRL--L-----------EN--------D--------------------  110 (379)
Q Consensus        87 v~E~~~gg~L~--------------~~l~~-~~~l--~-----------e~--------~--------------------  110 (379)
                      +|+|++|..+.              ..+.. ...+  +           ..        .                    
T Consensus       109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  188 (346)
T 2q83_A          109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY  188 (346)
T ss_dssp             EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred             EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence            99999986431              11111 0111  1           00        0                    


Q ss_pred             ---HHHHHHHHHHHHHHHH-------------HCCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          111 ---CRRYFQQLIDAVAHCH-------------SKGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       111 ---~~~~~~qil~~l~ylH-------------~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                         ...+..++..++.+|+             ..+++|+|++|.||+++.++.+.|+||+.+.
T Consensus       189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence               1111223334566665             2579999999999999888899999999764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.90  E-value=0.00012  Score=63.73  Aligned_cols=122  Identities=14%  Similarity=0.062  Sum_probs=81.1

Q ss_pred             CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH-HCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccccc
Q 016991           94 GELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCH-SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCG  171 (379)
Q Consensus        94 g~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH-~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~g  171 (379)
                      -+|.+.+.. +.+++|+++|.++.|.+.+|.-+- +..-..+=+.|..|++..+|++-+.+ +.+.            ..
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------~~   99 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------AG   99 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-----------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc------------cc
Confidence            368888865 468999999999999999987762 12222344557899999999988764 1110            12


Q ss_pred             CCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccCC
Q 016991          172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       172 t~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      ...+.|||...  ...+.+.=|+|||+++|.-+--.+|=                 .-+..+|+++.+||..|..-
T Consensus       100 ~~~~~~pe~~~--~~~te~~~IysLG~tLY~ALDygL~e-----------------~eE~eLS~~LE~LL~~Mt~~  156 (229)
T 2yle_A          100 EPPPVAGKLGY--SQCMETEVIESLGIIIYKALDYGLKE-----------------NEERELSPPLEQLIDHMANT  156 (229)
T ss_dssp             -------CCSS--SSSCHHHHHHHHHHHHHHHHTTTCCT-----------------TEEECCCHHHHHHHHHHTTC
T ss_pred             ccCCCChhhcc--ccchHHHHHHHHHHHHHHHhhcCCCc-----------------ccchhhCHHHHHHHHHHHhc
Confidence            23577888763  22347889999999999988533331                 12345899999999999866

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.88  E-value=0.00012  Score=68.03  Aligned_cols=75  Identities=12%  Similarity=0.212  Sum_probs=59.3

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEEEEec
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR---HPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      .+.|+.|....+|+...  ++..+++|+....      ....+..|...|+.|.   ...+.+++.+....+..|+||||
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~  112 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEA  112 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEEC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEe
Confidence            46789999999999875  4678889986532      2456788998888774   35678888888888899999999


Q ss_pred             cCCCCh
Q 016991           91 VTGGEL   96 (379)
Q Consensus        91 ~~gg~L   96 (379)
                      ++|..+
T Consensus       113 l~G~~~  118 (312)
T 3jr1_A          113 LNKSKN  118 (312)
T ss_dssp             CCCCCC
T ss_pred             ccCCCC
Confidence            998764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.85  E-value=7.7e-05  Score=72.13  Aligned_cols=33  Identities=18%  Similarity=0.261  Sum_probs=28.1

Q ss_pred             HHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991          126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus       126 H~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      +...++|+|++|.||+++.++ +.++||+.+...
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            356799999999999999876 999999987643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.71  E-value=9.9e-05  Score=67.90  Aligned_cols=136  Identities=13%  Similarity=0.107  Sum_probs=75.8

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEEe
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVYIILE   89 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~lv~E   89 (379)
                      +.-.+.|+.|....+|++      ..+++|+.......    .-...+|..+++.+...++ .+++..  ..+.-++++|
T Consensus        20 ~~~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e   87 (301)
T 3dxq_A           20 YTGPLERLGGLTNLVFRA------GDLCLRIPGKGTEE----YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTR   87 (301)
T ss_dssp             CCSCEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEE
T ss_pred             ccceeEcCCcccccccee------eeEEEECCCCCccc----eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEe
Confidence            433788999999999998      56888887542110    0123467777776653333 355544  3334578999


Q ss_pred             cc-CCCChHHHH------------------HhcC-CCC-----HHHHHHHHHH--------------HHHHHHHHH----
Q 016991           90 FV-TGGELFDKI------------------VHQG-RLL-----ENDCRRYFQQ--------------LIDAVAHCH----  126 (379)
Q Consensus        90 ~~-~gg~L~~~l------------------~~~~-~l~-----e~~~~~~~~q--------------il~~l~ylH----  126 (379)
                      |+ +|.++....                  .... .++     ......+..+              +...+..+.    
T Consensus        88 ~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~  167 (301)
T 3dxq_A           88 YIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALA  167 (301)
T ss_dssp             CCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHH
T ss_pred             ecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHH
Confidence            99 665442110                  0000 010     1111111111              111122111    


Q ss_pred             H----CCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991          127 S----KGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus       127 ~----~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .    ..++|+|+.|.||+ ..++.+.++||..+...
T Consensus       168 ~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g  203 (301)
T 3dxq_A          168 AHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGMN  203 (301)
T ss_dssp             SSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred             hcCCCceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence            1    23899999999999 56678899999977543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.47  E-value=0.00025  Score=66.06  Aligned_cols=137  Identities=15%  Similarity=0.166  Sum_probs=70.8

Q ss_pred             eeeecccCCeE-EEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeEEEEEec
Q 016991           14 GRTIGEGTFAK-VRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH--PNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        14 ~~~LG~G~~g~-V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h--p~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      .+.|+.|+... +|+... .+|..+++|......      ...+..|+.+++.+..  -.+.+++.+....+  +++||+
T Consensus        23 ~~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~------~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~   93 (333)
T 3csv_A           23 RTPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE------GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIED   93 (333)
T ss_dssp             ECC--------CCEEEEC-TTCCEEEEEECCTTT------TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECC
T ss_pred             eeECCCCCCCceEEEEEc-CCCCeEEEEECCCCC------CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEee
Confidence            34566665555 556643 236677777543321      0234456777666642  23456666533333  789999


Q ss_pred             cCCCChHHHHHhc--------------------------CCCCHHHHH-------H-HH------------HHHHHHHHH
Q 016991           91 VTGGELFDKIVHQ--------------------------GRLLENDCR-------R-YF------------QQLIDAVAH  124 (379)
Q Consensus        91 ~~gg~L~~~l~~~--------------------------~~l~e~~~~-------~-~~------------~qil~~l~y  124 (379)
                      +.|..+.+.+...                          ..+......       . +.            ..+...+..
T Consensus        94 l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~  173 (333)
T 3csv_A           94 LGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQ  173 (333)
T ss_dssp             CCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             CCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence            9776665443211                          011111110       0 00            011122223


Q ss_pred             H------HHCCceeecCCCCcEEEccC----CCeEEeeeccccCC
Q 016991          125 C------HSKGVYHRDLKPENLLLDSY----GNLKVSDFGLSALP  159 (379)
Q Consensus       125 l------H~~gi~HrDlkp~NIll~~~----~~lkl~DfGl~~~~  159 (379)
                      +      +...++|||+.+.||+++.+    +.+.|+||+.+...
T Consensus       174 l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          174 ILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             HHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             HHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            3      13469999999999999874    67999999987543

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.39  E-value=0.0013  Score=59.86  Aligned_cols=79  Identities=9%  Similarity=0.051  Sum_probs=54.3

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCC---CcceEEEEEEeCCeEEE
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP---NIVRLHEVLASRTKVYI   86 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp---~Iv~l~~~~~~~~~~~l   86 (379)
                      +..-++.+|.|..+.||+.... +|+.|.+|+-......   ....+..|...|+.+...   -+.+++.+  .  .-++
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~l   87 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTL   87 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEE
T ss_pred             CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceE
Confidence            3455788999999999999864 6899999976543211   124577899999887522   34455543  2  2478


Q ss_pred             EEeccCCCCh
Q 016991           87 ILEFVTGGEL   96 (379)
Q Consensus        87 v~E~~~gg~L   96 (379)
                      ||||++++..
T Consensus        88 v~e~l~~~~~   97 (288)
T 3f7w_A           88 AMEWVDERPP   97 (288)
T ss_dssp             EEECCCCCCC
T ss_pred             EEEeecccCC
Confidence            9999987653

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.39  E-value=0.00057  Score=63.17  Aligned_cols=137  Identities=12%  Similarity=0.123  Sum_probs=76.1

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----CCCcceEE-E--EEEeCCeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-----HPNIVRLH-E--VLASRTKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----hp~Iv~l~-~--~~~~~~~~~   85 (379)
                      .+.|+.|....+|+.... +| .+++|+.....     ..+.+..|..+++.+.     -|.++... +  +....+..+
T Consensus        27 ~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~   99 (322)
T 2ppq_A           27 YKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA   99 (322)
T ss_dssp             EEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred             eeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence            466788988999998764 33 68889876521     1134556777776654     23333210 0  112346679


Q ss_pred             EEEeccCCCChH--------------HHHHhc-CCC--------CHHHHHHH---------------HHHHHHHHHHHHH
Q 016991           86 IILEFVTGGELF--------------DKIVHQ-GRL--------LENDCRRY---------------FQQLIDAVAHCHS  127 (379)
Q Consensus        86 lv~E~~~gg~L~--------------~~l~~~-~~l--------~e~~~~~~---------------~~qil~~l~ylH~  127 (379)
                      ++++|++|..+.              ..+... ..+        ........               -..+...+..+.+
T Consensus       100 ~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~  179 (322)
T 2ppq_A          100 ALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAA  179 (322)
T ss_dssp             EEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHh
Confidence            999999885431              011110 011        10100010               0113344555552


Q ss_pred             -------CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          128 -------KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       128 -------~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                             .+++|+|+.|.||+++.++.+.|+||+.+.
T Consensus       180 ~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          180 HWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             HCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence                   369999999999999986666899998664

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.32  E-value=0.00068  Score=65.72  Aligned_cols=73  Identities=12%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             eeeecccCCeEEEEEEECC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRE-------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~   85 (379)
                      ++.|+.|....+|++....       ++..+++|+.....  .   .+.+.+|..+++.+...++ .++++.+.+    .
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g  148 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G  148 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--c---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence            4678889999999998653       35789999874321  1   1334478888887753333 566765542    2


Q ss_pred             EEEeccCCCC
Q 016991           86 IILEFVTGGE   95 (379)
Q Consensus        86 lv~E~~~gg~   95 (379)
                      +|+||++|.+
T Consensus       149 ~v~e~l~G~~  158 (429)
T 1nw1_A          149 RLEEYIPSRP  158 (429)
T ss_dssp             EEECCCCEEE
T ss_pred             EEEEEeCCcc
Confidence            8999998743

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.32  E-value=0.0005  Score=65.50  Aligned_cols=140  Identities=19%  Similarity=0.198  Sum_probs=82.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEe
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRE-------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLHEVLAS   80 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~   80 (379)
                      +..+ ++.|..|-...+|++....       ++..|++|+.....    .....+.+|..+++.+.. .-..++++.+.+
T Consensus        51 ~~l~-v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~  125 (379)
T 3feg_A           51 EELR-VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE  125 (379)
T ss_dssp             GGCC-CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT
T ss_pred             CceE-EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC
Confidence            3444 3567778889999988642       35789999853211    123456689999887753 223566666543


Q ss_pred             CCeEEEEEeccCCCChHH----------HH----Hh--cC------CC--CHHHHHHHHHHHHH----------------
Q 016991           81 RTKVYIILEFVTGGELFD----------KI----VH--QG------RL--LENDCRRYFQQLID----------------  120 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~----------~l----~~--~~------~l--~e~~~~~~~~qil~----------------  120 (379)
                          .+||||++|..|..          .+    .+  ..      ..  ...++.++..++-.                
T Consensus       126 ----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~  201 (379)
T 3feg_A          126 ----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYS  201 (379)
T ss_dssp             ----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTT
T ss_pred             ----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHH
Confidence                28999998855421          11    10  11      11  13455666655422                


Q ss_pred             ---HHHHHH----H----CCceeecCCCCcEEEccC----CCeEEeeecccc
Q 016991          121 ---AVAHCH----S----KGVYHRDLKPENLLLDSY----GNLKVSDFGLSA  157 (379)
Q Consensus       121 ---~l~ylH----~----~gi~HrDlkp~NIll~~~----~~lkl~DfGl~~  157 (379)
                         .+..|.    .    ..++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       202 l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          202 LKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence               233332    2    259999999999999876    789999998764

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.29  E-value=0.00069  Score=62.74  Aligned_cols=75  Identities=15%  Similarity=0.126  Sum_probs=46.5

Q ss_pred             eeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC--cceEEEE-----EEeCCeEEEE
Q 016991           15 RTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN--IVRLHEV-----LASRTKVYII   87 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~--Iv~l~~~-----~~~~~~~~lv   87 (379)
                      ..|+ |....||++.. .+|+.+++|+.......    ...+..|..+++.+....  +.+++..     ....+..+++
T Consensus        32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~----~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l  105 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV  105 (328)
T ss_dssp             EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred             Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCCC----HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence            4566 88889998754 34668999987633211    245667787777664211  3333332     2235667899


Q ss_pred             EeccCCCC
Q 016991           88 LEFVTGGE   95 (379)
Q Consensus        88 ~E~~~gg~   95 (379)
                      +++++|..
T Consensus       106 ~~~i~G~~  113 (328)
T 1zyl_A          106 FPSVGGRQ  113 (328)
T ss_dssp             EECCCCEE
T ss_pred             EEecCCCC
Confidence            99998744

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.16  E-value=0.0006  Score=64.50  Aligned_cols=74  Identities=15%  Similarity=0.130  Sum_probs=44.0

Q ss_pred             eeeecccCCeEEEEEEECC--------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeE
Q 016991           14 GRTIGEGTFAKVRFAQNRE--------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN-IVRLHEVLASRTKV   84 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~--------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~-Iv~l~~~~~~~~~~   84 (379)
                      .+.|+.|....+|++....        .+..+++|+.....   .. ......|..+++.+...+ +.++++..  .  -
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--G  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cc-eecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence            4677889899999998653        13688889865421   11 112357888887775333 34666544  2  2


Q ss_pred             EEEEeccCCCC
Q 016991           85 YIILEFVTGGE   95 (379)
Q Consensus        85 ~lv~E~~~gg~   95 (379)
                      ++|+||++|..
T Consensus       110 ~~v~e~i~G~~  120 (369)
T 3c5i_A          110 GRIEEWLYGDP  120 (369)
T ss_dssp             EEEEECCCSEE
T ss_pred             cEEEEEecCCc
Confidence            68999998754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.92  E-value=0.0043  Score=58.00  Aligned_cols=32  Identities=19%  Similarity=0.321  Sum_probs=27.8

Q ss_pred             CCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991          128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus       128 ~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .+++|+|+.|.||+++.++.+.|+||+.+...
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~  237 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA  237 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence            46999999999999998889999999876543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.68  E-value=0.01  Score=57.83  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=48.4

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEeCCeEEEEEeccC
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~~~~~~lv~E~~~   92 (379)
                      .+.|+.|-...+|++.....+..+++|+.....   .... ...+|..+++.+...++ .++++.+.  +  ..|+||++
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~---~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~  184 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT---DEII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD  184 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-C---CSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh---hhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence            467888999999999876545788999874321   1011 12578889988875444 56777663  2  25999998


Q ss_pred             CCCh
Q 016991           93 GGEL   96 (379)
Q Consensus        93 gg~L   96 (379)
                      |.+|
T Consensus       185 G~~l  188 (458)
T 2qg7_A          185 GYAL  188 (458)
T ss_dssp             SEEC
T ss_pred             CccC
Confidence            7443

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.81  E-value=0.016  Score=55.87  Aligned_cols=74  Identities=12%  Similarity=0.142  Sum_probs=47.3

Q ss_pred             eeeecccCCeEEEEEEECCC-------CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCeEE
Q 016991           14 GRTIGEGTFAKVRFAQNRET-------GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLHEVLASRTKVY   85 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~-------~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~~~~~~   85 (379)
                      ++.|..|....+|+......       +..|++++.....   ... -...+|..+++.+.. .-..++++.+.    -+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~-idR~~E~~~l~~L~~~gi~P~l~~~~~----~~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKF-YDSKVELDVFRYLSNINIAPNIIADFP----EG  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CC-CCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chh-cCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence            46677788999999987521       5789999864321   111 123578888877753 22345565332    27


Q ss_pred             EEEeccCCCC
Q 016991           86 IILEFVTGGE   95 (379)
Q Consensus        86 lv~E~~~gg~   95 (379)
                      .|+||++|..
T Consensus       147 ~I~efI~G~~  156 (424)
T 3mes_A          147 RIEEFIDGEP  156 (424)
T ss_dssp             EEEECCCSEE
T ss_pred             EEEEEeCCcc
Confidence            8999999865

>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A

Probab=92.37  E-value=0.21  Score=38.94  Aligned_cols=34  Identities=9%  Similarity=0.144  Sum_probs=29.3

Q ss_pred             eeecCCHHHHHHHHHHHHHhCCcEEEEec-ceEEE
Q 016991          341 FVSRQPAQVILSNIEAVAESLSLKVHTRN-YKVCL  374 (379)
Q Consensus       341 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  374 (379)
                      -+|..+|++|+..|+++++.+|+.|++++ |.++-
T Consensus        33 tTS~~~P~eIm~eI~rvL~~~gi~~~~~g~y~l~C   67 (120)
T 3ose_A           33 TTSSMDPNDMMREIRKVLDANNCDYEQKERFLLFC   67 (120)
T ss_dssp             CEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEE
T ss_pred             CcccCCHHHHHHHHHHHHHHCCCEEEEcCCEEEEE
Confidence            37899999999999999999999998865 65544

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=89.60  E-value=1.1  Score=38.57  Aligned_cols=114  Identities=18%  Similarity=0.250  Sum_probs=79.9

Q ss_pred             CCCCcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC
Q 016991           67 RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        67 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~  146 (379)
                      .||+++.. .+-.+.+.+.+.++.-+.+.-+..+   ..++....++++.+|+....+++  .-+|=-|.|+||+++.++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~i---k~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~~~  116 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNI---KSFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTRDG  116 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGG---GGSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECTTS
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHHH---HhcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcCCC
Confidence            68999877 5777777777777765433333334   45778888999999988775443  346778999999999999


Q ss_pred             CeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHH-HHHHHHHHHHhCCCCC
Q 016991          147 NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW-SCGVILFVLMAGYLPF  210 (379)
Q Consensus       147 ~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~Diw-SlGvil~~ll~g~~Pf  210 (379)
                      .+++.--|+....                 +|       |.....|.| ..=|++..++.++..|
T Consensus       117 ~p~i~~RGik~~l-----------------~P-------~~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          117 LPIAKTRGLQNVV-----------------DP-------LPVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             CEEESCCEETTTB-----------------SC-------CCCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             CEEEEEccCccCC-----------------CC-------CCCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            9999877753221                 11       111344554 4668888999998877

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=88.91  E-value=1.3  Score=38.25  Aligned_cols=113  Identities=17%  Similarity=0.190  Sum_probs=79.7

Q ss_pred             CCCCcceEEEEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHH-HHHHCCceeecCCCCcEEEccC
Q 016991           67 RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA-HCHSKGVYHRDLKPENLLLDSY  145 (379)
Q Consensus        67 ~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~-ylH~~gi~HrDlkp~NIll~~~  145 (379)
                      .||++  -..+-.+.+.+.+.++.-+++.-+..+   ..++....++++.+|+.... ++  ..-+|=-|.|+||++|.+
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i---~~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~  120 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI---RKTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRA  120 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH---HTSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTT
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH---HhcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCC
Confidence            58888  555667788888888876566556666   45788888888888877665 44  445677899999999999


Q ss_pred             CCeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHH-HHHHHHHHHHhCCCCC
Q 016991          146 GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVW-SCGVILFVLMAGYLPF  210 (379)
Q Consensus       146 ~~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~Diw-SlGvil~~ll~g~~Pf  210 (379)
                      +.+++.-.|+-..                 ++|.       .....|.| +.=|++..++.++..|
T Consensus       121 ~~p~i~hRGi~~~-----------------lpP~-------e~~ee~fl~qyKali~all~~K~~F  162 (219)
T 4ano_A          121 LEPFFLHVGVKES-----------------LPPD-------EWDDERLLREVKATVLALTEGEYRF  162 (219)
T ss_dssp             CCEEESCCEETTT-----------------BSSC-------SCCHHHHHHHHHHHHHHHTTCSSCH
T ss_pred             CcEEEEEcCCccc-----------------CCCC-------CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence            9999987776322                 2221       12344555 4667888888877665

>4eai_A 5'-AMP-activated protein kinase catalytic subunit linker, 5'-AMP-activated protein...; AMPK, transferase; HET: AMP; 2.29A {Rattus norvegicus} PDB: 4eaj_A* 4eak_A* 4eal_A*

Probab=88.09  E-value=0.79  Score=34.67  Aligned_cols=40  Identities=13%  Similarity=0.150  Sum_probs=33.5

Q ss_pred             ccccceeecCCHHHHHHHHHHHHHhCCcEEEE-ecceEEEe
Q 016991          336 KRQTRFVSRQPAQVILSNIEAVAESLSLKVHT-RNYKVCLV  375 (379)
Q Consensus       336 ~~~~rf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  375 (379)
                      ++.-...|...|.+||..|..+.+.+|+.|++ +.|.|+..
T Consensus         7 kW~LGIrS~~~P~eiM~eIyraLk~lg~~Wk~~~~Y~lkcR   47 (106)
T 4eai_A            7 KWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVR   47 (106)
T ss_dssp             EEEESEEECSCHHHHHHHHHHHHHHHTCEEEEEETTEEEEE
T ss_pred             cceEcceeCCCHHHHHHHHHHHHHHcCCEEeeCCceEEEEE
Confidence            55567788899999999999999999999988 45776543

>2y8l_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, serine/threonine-protein KI; HET: ADP AMP; 2.50A {Rattus norvegicus} PDB: 2y8q_A* 2ya3_A*

Probab=87.30  E-value=0.99  Score=36.97  Aligned_cols=41  Identities=10%  Similarity=0.112  Sum_probs=35.6

Q ss_pred             cccccceeecCCHHHHHHHHHHHHHhCCcEEEEe-cceEEEe
Q 016991          335 VKRQTRFVSRQPAQVILSNIEAVAESLSLKVHTR-NYKVCLV  375 (379)
Q Consensus       335 ~~~~~rf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  375 (379)
                      .|+.-...|..+|.+||..|..+.+.||+.||+. .|.|+..
T Consensus        17 ~kWhLGIrSrs~P~eIM~EVyRALk~Lg~eWK~i~pY~IkcR   58 (173)
T 2y8l_A           17 MAWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVR   58 (173)
T ss_dssp             CEEEESEEECSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred             ceeeeecccCCCHHHHHHHHHHHHHHcCCEEeeCCCeEEEEE
Confidence            5788889999999999999999999999999984 5766543

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=85.07  E-value=0.065  Score=52.20  Aligned_cols=64  Identities=8%  Similarity=0.181  Sum_probs=18.8

Q ss_pred             eeeeeecccCCeEEEEEEECCCCcEEEE------EEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 016991           12 EVGRTIGEGTFAKVRFAQNRETGESVAM------KVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA   79 (379)
Q Consensus        12 ~~~~~LG~G~~g~V~~a~~~~~~~~vai------K~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~   79 (379)
                      .+.+.||   ||.||.+.......+||+      |........ .+....+.+|..+++.++|||+++.+.+..
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~-~e~~~~~~rea~l~~~~~H~niv~~h~f~~  214 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS-EKRLTSLVRRATLKENEQIPKYEKIHNFKV  214 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCcccccccccc-ccccccccccccccccccccccCCCcceEE
Confidence            3456776   999999998765668888      654332222 223345777888999999999999988764

>4eag_A EG:132E8.2 protein; AMPK, transferase; HET: ATP TAM; 2.70A {Drosophila melanogaster}

Probab=84.80  E-value=1.5  Score=34.25  Aligned_cols=40  Identities=18%  Similarity=0.160  Sum_probs=32.8

Q ss_pred             ccccceeecCCHHHHHHHHHHHHHhCCcEEEEe-cceEEEe
Q 016991          336 KRQTRFVSRQPAQVILSNIEAVAESLSLKVHTR-NYKVCLV  375 (379)
Q Consensus       336 ~~~~rf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  375 (379)
                      ++.-...|...|.+||..|..+.+.+|+.||+. .|.|+..
T Consensus         7 kW~LGIrS~~~P~eIM~EVyrALk~Lg~eWK~~~pY~vkcR   47 (130)
T 4eag_A            7 KWHLGIRSQSKPNDIMLEVYRAMKALSYEWKIINPYHVRVR   47 (130)
T ss_dssp             CEEESBCCCSCHHHHHHHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred             ceeeeeecCCCHHHHHHHHHHHHHHCCCEEeeCCCEEEEEE
Confidence            455566788889999999999999999999985 5776653

>1v5s_A MAP/microtubule affinity-regulating kinase 3; Ka1 domain, ELKL motif, MARK3, phosphorylation, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.129.6.1

Probab=82.87  E-value=1.6  Score=34.16  Aligned_cols=32  Identities=9%  Similarity=0.093  Sum_probs=27.2

Q ss_pred             eecCCHHHHHHHHHHHHHhCCcEEEE-ecceEE
Q 016991          342 VSRQPAQVILSNIEAVAESLSLKVHT-RNYKVC  373 (379)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  373 (379)
                      +|..+|.+|+..|..+++.+|+.|++ +.|.++
T Consensus        34 TSsk~P~eIm~EI~rvL~~~~i~~k~~~~y~L~   66 (126)
T 1v5s_A           34 GSSGSSGDMMREIRKVLGANNCDYEQRERFLLF   66 (126)
T ss_dssp             CCCSSHHHHHHHHHHHHHHTTEEEEEEETTEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCcEEEECCEEEE
Confidence            57889999999999999999999987 446443

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=81.65  E-value=0.58  Score=44.41  Aligned_cols=28  Identities=32%  Similarity=0.466  Sum_probs=24.1

Q ss_pred             ceeecCCCCcEEE------ccCCCeEEeeecccc
Q 016991          130 VYHRDLKPENLLL------DSYGNLKVSDFGLSA  157 (379)
Q Consensus       130 i~HrDlkp~NIll------~~~~~lkl~DfGl~~  157 (379)
                      ++|+|+.+.|||+      ++++.+.++||.+|.
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            6899999999999      345679999998775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	379
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	3e-89
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-85
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	8e-83
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-81
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-80
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-79
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-79
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-78
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-78
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-77
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	5e-77
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-76
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-75
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-75
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-74
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-74
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-72
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-72
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-72
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-71
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	3e-70
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-69
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-66
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-65
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-65
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-65
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-64
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-64
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-62
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-62
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	6e-62
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-61
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-60
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-60
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-60
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-60
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-60
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-59
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-59
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-58
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-57
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-57
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-57
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-57
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-56
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-56
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-56
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-56
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-56
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-55
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-55
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-53
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-52
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-50
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-50
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-50
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-49
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	7e-49
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-49
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-45
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-45
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	7e-39
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-21

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  267 bits (685), Expect = 3e-89
 Identities = 94/258 (36%), Positives = 148/258 (57%), Gaps = 3/258 (1%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +E+GR +G+G F  V  A+ +++   +A+KVL K+ + K  +  Q++RE+ I   +RHP
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI+RL+      T+VY+ILE+   G ++ ++    +  E     Y  +L +A+++CHSK 
Sbjct: 67  NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 126

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRD+KPENLLL S G LK++DFG S           T CGT +Y+ PE++  R +D  
Sbjct: 127 VIHRDIKPENLLLGSAGELKIADFGWSVHAPS--SRRTTLCGTLDYLPPEMIEGRMHD-E 183

Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
             D+WS GV+ +  + G  PF        YK+I+  EF+ P + + GA  LI ++L  NP
Sbjct: 184 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNP 243

Query: 250 KTRIRIEGIRKHPWFRKN 267
             R  +  + +HPW   N
Sbjct: 244 SQRPMLREVLEHPWITAN 261

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  258 bits (660), Expect = 2e-85
 Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 7/265 (2%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +++ +T+GEG + +V+ A NR T E+VA+K++     +     + IK+EI I K++ H 
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCP--ENIKKEICINKMLNHE 63

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           N+V+ +         Y+ LE+ +GGELFD+I     + E D +R+F QL+  V + H  G
Sbjct: 64  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 123

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYD 187
           + HRD+KPENLLLD   NLK+SDFGL+ + +      LL+  CGT  YVAPE+L  R + 
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFH 183

Query: 188 GSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFW--FSTGATSLIHKI 244
               DVWSCG++L  ++AG LP+   +D    Y      +     W    +   +L+HKI
Sbjct: 184 AEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKI 243

Query: 245 LDPNPKTRIRIEGIRKHPWFRKNYN 269
           L  NP  RI I  I+K  W+ K   
Sbjct: 244 LVENPSARITIPDIKKDRWYNKPLK 268

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  252 bits (644), Expect = 8e-83
 Identities = 81/270 (30%), Positives = 139/270 (51%), Gaps = 9/270 (3%)

Query: 4   QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM 63
           + +R   ++ G+ +GEG+F+ V  A+   T    A+K+L K  I+K   V  + RE  +M
Sbjct: 3   RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 62

Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
             + HP  V+L+       K+Y  L +   GEL   I   G   E   R Y  +++ A+ 
Sbjct: 63  SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 122

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGTPNYVAPEVL 181
           + H KG+ HRDLKPEN+LL+   +++++DFG + +     +        GT  YV+PE+L
Sbjct: 123 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 182

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
           + +     ++D+W+ G I++ L+AG  PF   +   +++KI   E+  P  F   A  L+
Sbjct: 183 TEKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLV 241

Query: 242 HKILDPNPKTRIRIE------GIRKHPWFR 265
            K+L  +   R+  E       ++ HP+F 
Sbjct: 242 EKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  249 bits (636), Expect = 2e-81
 Identities = 67/280 (23%), Positives = 118/280 (42%), Gaps = 8/280 (2%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +   R IG G+F  V FA++    E VA+K ++ S    +     I +E+  ++ +RHP
Sbjct: 16  LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP 75

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           N ++           ++++E+  G       VH+  L E +        +  +A+ HS  
Sbjct: 76  NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL--SNRGYD 187
           + HRD+K  N+LL   G +K+ DFG +++        ++  GTP ++APEV+   + G  
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----NSFVGTPYWMAPEVILAMDEGQY 191

Query: 188 GSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW--FSTGATSLIHKIL 245
               DVWS G+    L     P    +  +    I   E        +S    + +   L
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL 251

Query: 246 DPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVH 285
              P+ R   E + KH +  +   P    +  +   D V 
Sbjct: 252 QKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR 291

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  246 bits (629), Expect = 1e-80
 Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 11/267 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +E+   +G+G F KV  AQN+ET    A KV+          ++    EI I+    HPN
Sbjct: 14  WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 70

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCHSKG 129
           IV+L +       ++I++EF  GG +   ++   R L E+  +   +Q +DA+ + H   
Sbjct: 71  IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 130

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL----SNRG 185
           + HRDLK  N+L    G++K++DFG+SA   + ++   +  GTP ++APEV+    S   
Sbjct: 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 190

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATSLIH 242
                ADVWS G+ L  +     P  E +   +  KI  +E    + P  +S+     + 
Sbjct: 191 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLK 250

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYN 269
           K L+ N   R     + +HP+   + N
Sbjct: 251 KCLEKNVDARWTTSQLLQHPFVTVDSN 277

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  244 bits (623), Expect = 1e-79
 Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 8/261 (3%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IG+G    V  A +  TG+ VA++ +      +    + I  EI +M+  ++P
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ---QQPKKELIINEILVMRENKNP 77

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV   +      ++++++E++ GG L D +V +  + E       ++ + A+   HS  
Sbjct: 78  NIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSNQ 136

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRD+K +N+LL   G++K++DFG  A          T  GTP ++APEV++ + Y   
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG-P 195

Query: 190 AADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA--EFSCPFWFSTGATSLIHKILD 246
             D+WS G++   ++ G  P+  E  L  LY        E   P   S      +++ LD
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLD 255

Query: 247 PNPKTRIRIEGIRKHPWFRKN 267
            + + R   + + +H + +  
Sbjct: 256 MDVEKRGSAKELLQHQFLKIA 276

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  244 bits (624), Expect = 5e-79
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 12/293 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y++   +G G F  V     R TG + A K +           + +++EI  M ++RHP
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHP 83

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSK 128
            +V LH+      ++ +I EF++GGELF+K+  +  ++ E++   Y +Q+   + H H  
Sbjct: 84  TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 143

Query: 129 GVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
              H DLKPEN++  +     LK+ DFGL+A      + +  T GT  + APEV   +  
Sbjct: 144 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH-LDPKQSVKVTTGTAEFAAPEVAEGKPV 202

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGATSLIH 242
            G   D+WS GV+ ++L++G  PFG  +     + + + +++         S      I 
Sbjct: 203 -GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR 261

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQY 295
           K+L  +P TR+ I    +HPW      P + S+        +        D +
Sbjct: 262 KLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAW 314

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  243 bits (622), Expect = 1e-78
 Identities = 73/276 (26%), Positives = 132/276 (47%), Gaps = 12/276 (4%)

Query: 3   KQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISI 62
           KQ      Y++   +G G F  V     + TG     K +     L       +K EISI
Sbjct: 23  KQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY---TVKNEISI 79

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDA 121
           M  + HP ++ LH+    + ++ +ILEF++GGELFD+I  +  ++ E +   Y +Q  + 
Sbjct: 80  MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 139

Query: 122 VAHCHSKGVYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPE 179
           + H H   + H D+KPEN++ ++    ++K+ DFGL+       E++  T  T  + APE
Sbjct: 140 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD-EIVKVTTATAEFAAPE 198

Query: 180 VLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFST 235
           ++          D+W+ GV+ +VL++G  PF   D     + +   ++          S 
Sbjct: 199 IVDREPVG-FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP 257

Query: 236 GATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
            A   I  +L   P+ R+ +    +HPW + +++ +
Sbjct: 258 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNL 293

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  241 bits (617), Expect = 2e-78
 Identities = 78/258 (30%), Positives = 138/258 (53%), Gaps = 3/258 (1%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHP 69
           + + + +G+G+F KV  A+ ++T +  A+K L K  +L    V+    E  ++ +   HP
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 63

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
            +  +     ++  ++ ++E++ GG+L   I    +   +    Y  ++I  +   HSKG
Sbjct: 64  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 123

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + +RDLK +N+LLD  G++K++DFG+      G    +T CGTP+Y+APE+L  + Y+  
Sbjct: 124 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYN-H 182

Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
           + D WS GV+L+ ++ G  PF   D   L+  I       P W    A  L+ K+    P
Sbjct: 183 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREP 242

Query: 250 KTRIRIEG-IRKHPWFRK 266
           + R+ + G IR+HP FR+
Sbjct: 243 EKRLGVRGDIRQHPLFRE 260

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  237 bits (606), Expect = 2e-77
 Identities = 79/269 (29%), Positives = 133/269 (49%), Gaps = 14/269 (5%)

Query: 7   RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           R   YEV  TIG G++ + +  + +  G+ +  K L   ++ +      +  E+++++ +
Sbjct: 2   RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLREL 60

Query: 67  RHPNIVRLHEVLASRT--KVYIILEFVTGGELFDKIVHQGR----LLENDCRRYFQQLID 120
           +HPNIVR ++ +  RT   +YI++E+  GG+L   I    +    L E    R   QL  
Sbjct: 61  KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 121 AVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
           A+  CH +      V HRDLKP N+ LD   N+K+ DFGL+ +            GTP Y
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYY 180

Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFS 234
           ++PE ++   Y+   +D+WS G +L+ L A   PF       L  KI   +F   P+ +S
Sbjct: 181 MSPEQMNRMSYN-EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS 239

Query: 235 TGATSLIHKILDPNPKTRIRIEGIRKHPW 263
                +I ++L+     R  +E I ++P 
Sbjct: 240 DELNEIITRMLNLKDYHRPSVEEILENPL 268

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  238 bits (607), Expect = 5e-77
 Identities = 103/275 (37%), Positives = 157/275 (57%), Gaps = 11/275 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y+    +G G F++V  A+++ T + VA+K +AK  +        ++ EI+++  ++HP
Sbjct: 10  IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKE--GSMENEIAVLHKIKHP 67

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV L ++  S   +Y+I++ V+GGELFD+IV +G   E D  R   Q++DAV + H  G
Sbjct: 68  NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG 127

Query: 130 VYHRDLKPENLLL---DSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           + HRDLKPENLL    D    + +SDFGLS +   G  +L T CGTP YVAPEVL+ + Y
Sbjct: 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG-SVLSTACGTPGYVAPEVLAQKPY 186

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--FSCPFW--FSTGATSLIH 242
              A D WS GVI ++L+ GY PF + +   L+++I  AE  F  P+W   S  A   I 
Sbjct: 187 S-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 245

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEE 277
            +++ +P+ R   E   +HPW   +    K   + 
Sbjct: 246 HLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQS 280

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  234 bits (599), Expect = 4e-76
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 17/273 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH------RMVDQIKREISIM 63
            YE    +G G  + VR   ++ T +  A+K++  +            + +   +E+ I+
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 64  KIVR-HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAV 122
           + V  HPNI++L +   + T  +++ + +  GELFD +  +  L E + R+  + L++ +
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 123

Query: 123 AHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
              H   + HRDLKPEN+LLD   N+K++DFG S     G E L   CGTP+Y+APE++ 
Sbjct: 124 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG-EKLREVCGTPSYLAPEIIE 182

Query: 183 -----NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--F 233
                N    G   D+WS GVI++ L+AG  PF       + + I +   +F  P W  +
Sbjct: 183 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY 242

Query: 234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
           S     L+ + L   P+ R   E    HP+F++
Sbjct: 243 SDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 275

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  233 bits (596), Expect = 3e-75
 Identities = 84/261 (32%), Positives = 155/261 (59%), Gaps = 9/261 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           +++ RT+G G+F +V   ++R  G   AMKVL K  +++ + V+    E  ++ IV HP 
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGV 130
           I+R+        ++++I++++ GGELF  +    R      + Y  ++  A+ + HSK +
Sbjct: 66  IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 125

Query: 131 YHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSA 190
            +RDLKPEN+LLD  G++K++DFG +   +   ++ +T CGTP+Y+APEV+S + Y+  +
Sbjct: 126 IYRDLKPENILLDKNGHIKITDFGFA---KYVPDVTYTLCGTPDYIAPEVVSTKPYN-KS 181

Query: 191 ADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNPK 250
            D WS G++++ ++AGY PF +++    Y+KI  AE   P +F+     L+ +++  +  
Sbjct: 182 IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLS 241

Query: 251 TRIR-----IEGIRKHPWFRK 266
            R+       E ++ HPWF++
Sbjct: 242 QRLGNLQNGTEDVKNHPWFKE 262

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  233 bits (596), Expect = 3e-75
 Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 13/270 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY +   +G G F  V       + ++   K +      K      +K+EISI+ I RH 
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV----KGTDQVLVKKEISILNIARHR 61

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSK 128
           NI+ LHE   S  ++ +I EF++G ++F++I      L E +   Y  Q+ +A+   HS 
Sbjct: 62  NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121

Query: 129 GVYHRDLKPENLLLDS--YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
            + H D++PEN++  +     +K+ +FG +   + G +        P Y APEV  +   
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-DNFRLLFTAPEYYAPEVHQHDVV 180

Query: 187 DGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGATSLIH 242
             +A D+WS G +++VL++G  PF       + + I  AE++         S  A   + 
Sbjct: 181 S-TATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVD 239

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
           ++L    K+R+      +HPW ++    V 
Sbjct: 240 RLLVKERKSRMTASEALQHPWLKQKIERVS 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  232 bits (592), Expect = 2e-74
 Identities = 84/261 (32%), Positives = 135/261 (51%), Gaps = 6/261 (2%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            ++  + +G+GTF KV   + + TG   AMK+L K  I+    V     E  +++  RHP
Sbjct: 6   DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
            +  L     +  ++  ++E+  GGELF  +  +    E   R Y  +++ A+ + HS+ 
Sbjct: 66  FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V +RD+K ENL+LD  G++K++DFGL          + T CGTP Y+APEVL +  Y   
Sbjct: 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYG-R 184

Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILDPNP 249
           A D W  GV+++ +M G LPF   D   L++ I   E   P   S  A SL+  +L  +P
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDP 244

Query: 250 KTRIR-----IEGIRKHPWFR 265
           K R+       + + +H +F 
Sbjct: 245 KQRLGGGPSDAKEVMEHRFFL 265

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  231 bits (590), Expect = 3e-74
 Identities = 68/317 (21%), Positives = 121/317 (38%), Gaps = 57/317 (17%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            +E    +G G    V    ++ +G  +A K++     +K  + +QI RE+ ++     P
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVLHECNSP 64

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK- 128
            IV  +    S  ++ I +E + GG L   +   GR+ E    +    +I  + +   K 
Sbjct: 65  YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            + HRD+KP N+L++S G +K+ DFG+S      +   ++  GT +Y++PE L    Y  
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERLQGTHYS- 181

Query: 189 SAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW---------------- 232
             +D+WS G+ L  +  G  P    D   L                              
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG 241

Query: 233 ----------------------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWF 264
                                       FS      ++K L  NP  R  ++ +  H + 
Sbjct: 242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

Query: 265 RKNYNPVKCSEEEEVNL 281
           ++       S+ EEV+ 
Sbjct: 302 KR-------SDAEEVDF 311

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  224 bits (572), Expect = 3e-72
 Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 18/279 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVD---QIKREISIMKIV 66
           +Y+VG  +G G F  V           VA+K + K  I     +    ++  E+ ++K V
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 67  R--HPNIVRLHEVLASRTKVYIILEFVTGG-ELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
                 ++RL +         +ILE      +LFD I  +G L E   R +F Q+++AV 
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124

Query: 124 HCHSKGVYHRDLKPENLLLD-SYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           HCH+ GV HRD+K EN+L+D + G LK+ DFG  AL +    +     GT  Y  PE + 
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFDGTRVYSPPEWIR 182

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIH 242
              Y G +A VWS G++L+ ++ G +PF   +      +I   +       S+    LI 
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFRQRVSSECQHLIR 236

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
             L   P  R   E I+ HPW +    P    E  E++L
Sbjct: 237 WCLALRPSDRPTFEEIQNHPWMQDVLLP---QETAEIHL 272

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  224 bits (572), Expect = 6e-72
 Identities = 88/268 (32%), Positives = 140/268 (52%), Gaps = 13/268 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIV 66
            Y+ G  +G G FA V+  + + TG   A K + K      R     + I+RE+SI+K +
Sbjct: 11  YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           +HPN++ LHEV  ++T V +ILE V GGELFD +  +  L E +   + +Q+++ V + H
Sbjct: 71  QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH 130

Query: 127 SKGVYHRDLKPENLLLDSYG----NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLS 182
           S  + H DLKPEN++L         +K+ DFGL+     G        GTP +VAPE+++
Sbjct: 131 SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG-NEFKNIFGTPEFVAPEIVN 189

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF----STGAT 238
                   AD+WS GVI ++L++G  PF           ++A  +     +    S  A 
Sbjct: 190 YEPLG-LEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFRK 266
             I ++L  +PK R+ I+   +HPW + 
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIKP 276

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  226 bits (578), Expect = 6e-72
 Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 13/266 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR--- 67
           + V R IG G F +V   +  +TG+  AMK L K  I   +       E  ++ +V    
Sbjct: 6   FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 65

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS 127
            P IV +     +  K+  IL+ + GG+L   +   G   E D R Y  ++I  + H H+
Sbjct: 66  CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 125

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYD 187
           + V +RDLKP N+LLD +G++++SD GL+    +     H + GT  Y+APEVL      
Sbjct: 126 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KPHASVGTHGYMAPEVLQKGVAY 183

Query: 188 GSAADVWSCGVILFVLMAGYLPF---GETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI 244
            S+AD +S G +LF L+ G+ PF      D   + +         P  FS    SL+  +
Sbjct: 184 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 243

Query: 245 LDPNPKTRIRIEG-----IRKHPWFR 265
           L  +   R+   G     +++ P+FR
Sbjct: 244 LQRDVNRRLGCLGRGAQEVKESPFFR 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (565), Expect = 3e-71
 Identities = 61/265 (23%), Positives = 117/265 (44%), Gaps = 15/265 (5%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
            +    IG G+F  V    + ET   VA   L    + K     + K E  ++K ++HPN
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEMLKGLQHPN 69

Query: 71  IVRLHEVLASRTK----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           IVR ++   S  K    + ++ E +T G L   +     +     R + +Q++  +   H
Sbjct: 70  IVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH 129

Query: 127 SKG--VYHRDLKPENLLLDS-YGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           ++   + HRDLK +N+ +    G++K+ D GL+ L +          GTP ++APE+   
Sbjct: 130 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--SFAKAVIGTPEFMAPEMYEE 187

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPFW--FSTGATSL 240
           + YD  + DV++ G+ +  +     P+    +   +Y+++ +      F          +
Sbjct: 188 K-YD-ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 245

Query: 241 IHKILDPNPKTRIRIEGIRKHPWFR 265
           I   +  N   R  I+ +  H +F+
Sbjct: 246 IEGCIRQNKDERYSIKDLLNHAFFQ 270

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  221 bits (565), Expect = 3e-70
 Identities = 95/321 (29%), Positives = 152/321 (47%), Gaps = 29/321 (9%)

Query: 3   KQTRRVAKYEV-GRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
           K+   +  Y+V  + +G G   KV    N+ T E  A+K+L            + +RE+ 
Sbjct: 5   KKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVE 56

Query: 62  IM-KIVRHPNIVRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRY 114
           +  +  + P+IVR+ +V     A R  + I++E + GGELF +I  +G     E +    
Sbjct: 57  LHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 116

Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLDSY---GNLKVSDFGLSALPQQGVELLHTTCG 171
            + + +A+ + HS  + HRD+KPENLL  S      LK++DFG +         L T C 
Sbjct: 117 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH-NSLTTPCY 175

Query: 172 TPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF----GETDLPTLYKKINAA-- 225
           TP YVAPEVL    YD  + D+WS GVI+++L+ GY PF    G    P +  +I     
Sbjct: 176 TPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQY 234

Query: 226 EFSCPFW--FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNLDD 283
           EF  P W   S     LI  +L   P  R+ I     HPW  ++    +        L +
Sbjct: 235 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKE 294

Query: 284 VHAVFDDIEDQYVAEQSENKV 304
               ++D++++  +  +  +V
Sbjct: 295 DKERWEDVKEEMTSALATMRV 315

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  220 bits (560), Expect = 2e-69
 Identities = 90/315 (28%), Positives = 164/315 (52%), Gaps = 15/315 (4%)

Query: 2   KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREIS 61
            + T ++ +++  +T+G G+F +V   +++E+G   AMK+L K  ++K + ++    E  
Sbjct: 34  SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93

Query: 62  IMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDA 121
           I++ V  P +V+L       + +Y+++E+V GGE+F  +   GR  E   R Y  Q++  
Sbjct: 94  ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVL 181
             + HS  + +RDLKPENLL+D  G ++V+DFG +   ++      T CGTP  +APE++
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFA---KRVKGRTWTLCGTPEALAPEII 210

Query: 182 SNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLI 241
            ++GY+  A D W+ GV+++ + AGY PF       +Y+KI + +   P  FS+    L+
Sbjct: 211 LSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLL 269

Query: 242 HKILDPNPKTRIR-----IEGIRKHPWFRK-NYNPVKCSEEE-----EVNLDDVHAVFDD 290
             +L  +   R       +  I+ H WF   ++  +   + E     +       + FDD
Sbjct: 270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDD 329

Query: 291 IEDQYVAEQSENKVG 305
            E++ +      K G
Sbjct: 330 YEEEEIRVSINEKCG 344

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  209 bits (533), Expect = 3e-66
 Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 12/267 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +YE+G  +G G  ++V  A++      VA+KVL            + +RE      + HP
Sbjct: 8   RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 67

Query: 70  NIVRLHEVLASRTK----VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
            IV +++   + T      YI++E+V G  L D +  +G +              A+   
Sbjct: 68  AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS 127

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL---PQQGVELLHTTCGTPNYVAPEVLS 182
           H  G+ HRD+KP N+++ +   +KV DFG++         V       GT  Y++PE   
Sbjct: 128 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 187

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGAT 238
               D + +DV+S G +L+ ++ G  PF      ++  +    +   P       S    
Sbjct: 188 GDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLD 246

Query: 239 SLIHKILDPNPKTRIRIEGIRKHPWFR 265
           +++ K L  NP+ R +     +    R
Sbjct: 247 AVVLKALAKNPENRYQTAAEMRADLVR 273

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  207 bits (527), Expect = 2e-65
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 16/263 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +  VG+ IG G+F  V   +       VA+K+L  +     + +   K E+ +++  RH 
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTP-QQLQAFKNEVGVLRKTRHV 64

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKI-VHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           NI+      ++  ++ I+ ++  G  L+  + + + +          +Q    + + H+K
Sbjct: 65  NILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSAL--PQQGVELLHTTCGTPNYVAPEVL--SNR 184
            + HRDLK  N+ L     +K+ DFGL+ +     G        G+  ++APEV+   ++
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183

Query: 185 GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFW------FSTGAT 238
                 +DV++ G++L+ LM G LP+   +       +    +  P              
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMK 243

Query: 239 SLIHKILDPNPKTRIRIEGIRKH 261
            L+ + L      R     I   
Sbjct: 244 RLMAECLKKKRDERPLFPQILAS 266

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (530), Expect = 5e-65
 Identities = 73/299 (24%), Positives = 121/299 (40%), Gaps = 41/299 (13%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y     IGEG +  V  A +      VA+K ++           +  REI I+   RH 
Sbjct: 9   RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHE 66

Query: 70  NIVRLHEVLASRT----KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           NI+ +++++ + T    K   ++  + G +L+  ++    L  +    +  Q++  + + 
Sbjct: 67  NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK-LLKTQHLSNDHICYFLYQILRGLKYI 125

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL---PQQGVELLHTTCGTPNYVAPEVLS 182
           HS  V HRDLKP NLLL++  +LK+ DFGL+ +          L     T  Y APE++ 
Sbjct: 126 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 185

Query: 183 NRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI-------------------- 222
           N      + D+WS G IL  +++    F           I                    
Sbjct: 186 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 245

Query: 223 NAAEFSCPFW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
                S P               + A  L+ K+L  NP  RI +E    HP+  + Y+P
Sbjct: 246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP 304

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  206 bits (524), Expect = 9e-65
 Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 31/292 (10%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            ++    IGEGT+  V  A+N+ TGE VA+K +   T     +     REIS++K + HP
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHP 61

Query: 70  NIVRLHEVLASRTKVYIILEFV-TGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           NIV+L +V+ +  K+Y++ EF+    + F        +     + Y  QL+  +A CHS 
Sbjct: 62  NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
            V HRDLKP+NLL+++ G +K++DFGL+      V        T  Y APE+L    Y  
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181

Query: 189 SAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA-----------------EFSCP 230
           +A D+WS G I   ++     F G++++  L++                      + S P
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 241

Query: 231 FW-----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
            W                 SL+ ++L  +P  RI  +    HP+F+    PV
Sbjct: 242 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  205 bits (523), Expect = 2e-64
 Identities = 70/294 (23%), Positives = 112/294 (38%), Gaps = 30/294 (10%)

Query: 12  EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI--LKHRMVDQIKREISIMKIVRHP 69
           E    +GEG FA V  A+++ T + VA+K +        K  +     REI +++ + HP
Sbjct: 1   EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 60

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NI+ L +    ++ + ++ +F+          +   L  +  + Y    +  + + H   
Sbjct: 61  NIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           + HRDLKP NLLLD  G LK++DFGL+               T  Y APE+L      G 
Sbjct: 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGV 180

Query: 190 AADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAA-EFSCPFW--------------- 232
             D+W+ G IL  L+       G++DL  L +        +   W               
Sbjct: 181 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSF 240

Query: 233 -----------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVKCSE 275
                             LI  +   NP  RI      K  +F     P    +
Sbjct: 241 PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQ 294

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (520), Expect = 6e-64
 Identities = 69/309 (22%), Positives = 117/309 (37%), Gaps = 45/309 (14%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKI 65
             V+KYE    IG+GTF +V  A++R+TG+ VA+K +      K        REI I+++
Sbjct: 7   DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN-EKEGFPITALREIKILQL 65

Query: 66  VRHPNIVRLHEVLASRT--------KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQ 117
           ++H N+V L E+  ++          +Y++ +F              +   ++ +R  Q 
Sbjct: 66  LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQM 125

Query: 118 LIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL----PQQGVELLHTTCGTP 173
           L++ + + H   + HRD+K  N+L+   G LK++DFGL+                   T 
Sbjct: 126 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTL 185

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP--- 230
            Y  PE+L      G   D+W  G I+  +                  I+    S     
Sbjct: 186 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 245

Query: 231 -----------------------------FWFSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                                        +     A  LI K+L  +P  RI  +    H
Sbjct: 246 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305

Query: 262 PWFRKNYNP 270
            +F  +  P
Sbjct: 306 DFFWSDPMP 314

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  200 bits (509), Expect = 1e-62
 Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 31/286 (10%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KY     IGEGT+  V  AQN   GE+ A+K +         +     REISI+K ++H 
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEK-EDEGIPSTTIREISILKELKHS 60

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIV+L++V+ ++ ++ ++ E +         V +G L     + +  QL++ +A+CH + 
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRDLKP+NLL++  G LK++DFGL+      V        T  Y AP+VL       +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYST 180

Query: 190 AADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA--EFSCPFW--------------- 232
             D+WS G I   ++ G   F          +I       +   W               
Sbjct: 181 TIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTV 240

Query: 233 ------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK 266
                              L+ K+L  +P  RI  +   +H +F++
Sbjct: 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (508), Expect = 2e-62
 Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 31/291 (10%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           KYE    IGEGT+  V  A+NRET E VA+K +         +     REI ++K ++H 
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHK 61

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG 129
           NIVRLH+VL S  K+ ++ EF             G L     + +  QL+  +  CHS+ 
Sbjct: 62  NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN 121

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGS 189
           V HRDLKP+NLL++  G LK+++FGL+      V        T  Y  P+VL       +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYST 181

Query: 190 AADVWSCGVILFVLMAGYLP-FGETDLPTLYKKINAAEFSCPF----------------- 231
           + D+WS G I   L     P F   D+    K+I     +                    
Sbjct: 182 SIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241

Query: 232 ------------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
                         +     L+  +L  NP  RI  E   +HP+F     P
Sbjct: 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  200 bits (509), Expect = 6e-62
 Identities = 78/320 (24%), Positives = 134/320 (41%), Gaps = 48/320 (15%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
            Y   + +G G +  V  A +  TG  VA+K L +          +  RE+ ++K +RH 
Sbjct: 19  VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP-FQSELFAKRAYRELRLLKHMRHE 77

Query: 70  NIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
           N++ L +V      L   T  Y+++ F+  G    K++   +L E+  +    Q++  + 
Sbjct: 78  NVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLR 135

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           + H+ G+ HRDLKP NL ++    LK+ DFGL+   +Q    +     T  Y APEV+ N
Sbjct: 136 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMTGYVVTRWYRAPEVILN 192

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF---------- 233
                   D+WS G I+  ++ G   F  +D     K+I     + P  F          
Sbjct: 193 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252

Query: 234 ---------------------STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPVK 272
                                S  A +L+ K+L  + + R+       HP+F   ++   
Sbjct: 253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT-- 310

Query: 273 CSEEEEVNLDDVHAVFDDIE 292
              E+E  +      FDD++
Sbjct: 311 ---EDEPQVQKYDDSFDDVD 327

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (497), Expect = 4e-61
 Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 16/257 (6%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           + ++ +TIG+G F  V     R  G  VA+K +                E S+M  +RH 
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHS 60

Query: 70  NIVRLHEVLA-SRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCH 126
           N+V+L  V+   +  +YI+ E++  G L D +  +GR  L  +   ++   + +A+ +  
Sbjct: 61  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
                HRDL   N+L+      KVSDFGL+   ++      T      + APE L  + +
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 177

Query: 187 DGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKI 244
             + +DVWS G++L+ + + G +P+    L  +  ++        P         ++   
Sbjct: 178 S-TKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNC 236

Query: 245 LDPNPKTRIRIEGIRKH 261
              +   R     +R+ 
Sbjct: 237 WHLDAAMRPSFLQLREQ 253

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (499), Expect = 2e-60
 Identities = 67/296 (22%), Positives = 117/296 (39%), Gaps = 39/296 (13%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+    +G G +  V  A + +TG  VA+K L++          +  RE+ ++K ++H 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHE 77

Query: 70  NIVRLHEVLASRTKV----YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           N++ L +V      +     + L     G   + IV   +L ++  +    Q++  + + 
Sbjct: 78  NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           HS  + HRDLKP NL ++    LK+ DFGL+      +        T  Y APE++ N  
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM---TGYVATRWYRAPEIMLNWM 194

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF------------ 233
           +     D+WS G I+  L+ G   F  TD     K I     +                 
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNY 254

Query: 234 -------------------STGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP 270
                              +  A  L+ K+L  +   RI       H +F + ++P
Sbjct: 255 IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (493), Expect = 2e-60
 Identities = 52/260 (20%), Positives = 107/260 (41%), Gaps = 13/260 (5%)

Query: 15  RTIGEGTFAKVRFA--QNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIV 72
           + +G G F  V+    Q ++  ++VA+K+L K+      + D++  E ++M+ + +P IV
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKIL-KNEANDPALKDELLAEANVMQQLDNPYIV 71

Query: 73  RLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYH 132
           R+  +        +++E    G L   +     + + +      Q+   + +       H
Sbjct: 72  RMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVH 130

Query: 133 RDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGS 189
           RDL   N+LL +    K+SDFGLS   +                 + APE ++   +  S
Sbjct: 131 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS-S 189

Query: 190 AADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDP 247
            +DVWS GV+++   + G  P+       +   +   E   CP         L++     
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY 249

Query: 248 NPKTRIRIEGIR---KHPWF 264
           + + R     +    ++ ++
Sbjct: 250 DVENRPGFAAVELRLRNYYY 269

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (496), Expect = 3e-60
 Identities = 86/284 (30%), Positives = 152/284 (53%), Gaps = 18/284 (6%)

Query: 1   MKKQTRRVA--KYEVGRTIGEGTFAKVRFAQ---NRETGESVAMKVLAKSTIL-KHRMVD 54
           +     +V    +E+ + +G G + KV   +     +TG+  AMKVL K+TI+ K +  +
Sbjct: 14  LTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTE 73

Query: 55  QIKREISIMKIVRH-PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRR 113
             + E  +++ +R  P +V LH    + TK+++IL+++ GGELF  +  + R  E++ + 
Sbjct: 74  HTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI 133

Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGT 172
           Y  +++ A+ H H  G+ +RD+K EN+LLDS G++ ++DFGLS        E  +  CGT
Sbjct: 134 YVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGT 193

Query: 173 PNYVAPEVL-SNRGYDGSAADVWSCGVILFVLMAGYLPFGETD----LPTLYKKINAAEF 227
             Y+AP+++         A D WS GV+++ L+ G  PF           + ++I  +E 
Sbjct: 194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP 253

Query: 228 SCPFWFSTGATSLIHKILDPNPKTRIR-----IEGIRKHPWFRK 266
             P   S  A  LI ++L  +PK R+       + I++H +F+K
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 297

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (498), Expect = 3e-60
 Identities = 83/336 (24%), Positives = 132/336 (39%), Gaps = 51/336 (15%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
           Y   + IG G+F  V  A+  ++GE VA+K + +    K        RE+ IM+ + H N
Sbjct: 22  YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK-------NRELQIMRKLDHCN 74

Query: 71  IVRLHEVLAS------RTKVYIILEFVTGG---ELFDKIVHQGRLLENDCRRYFQQLIDA 121
           IVRL     S         + ++L++V              +  L     + Y  QL  +
Sbjct: 75  IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134

Query: 122 VAHCHSKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEV 180
           +A+ HS G+ HRD+KP+NLLLD     LK+ DFG +    +G E   +   +  Y APE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSYICSRYYRAPEL 193

Query: 181 LSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKI-----------------N 223
           +       S+ DVWS G +L  L+ G   F          +I                 N
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253

Query: 224 AAEFSCPFW------------FSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNPV 271
             EF  P                  A +L  ++L+  P  R+       H +F +  +P 
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDP- 312

Query: 272 KCSEEEEVNLDDVHAVFDDIEDQYVAEQSENKVGGP 307
                +  N  D  A+F+    +  +      +  P
Sbjct: 313 ---NVKLPNGRDTPALFNFTTQELSSNPPLATILIP 345

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (489), Expect = 6e-60
 Identities = 54/255 (21%), Positives = 110/255 (43%), Gaps = 10/255 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
               + +G G F  V++ + R     VA+K++ + ++ +    D+   E  +M  + H  
Sbjct: 6   LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEK 60

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKG 129
           +V+L+ V   +  ++II E++  G L + +   + R          + + +A+ +  SK 
Sbjct: 61  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
             HRDL   N L++  G +KVSDFGLS  +          +     +  PEVL    +  
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS- 179

Query: 189 SAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIHKILD 246
           S +D+W+ GV+++ + + G +P+         + I        P   S    ++++    
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWH 239

Query: 247 PNPKTRIRIEGIRKH 261
                R   + +  +
Sbjct: 240 EKADERPTFKILLSN 254

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  191 bits (487), Expect = 3e-59
 Identities = 72/277 (25%), Positives = 116/277 (41%), Gaps = 12/277 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
              +   +G G + +V     ++   +VA+K L + T+     V++  +E ++MK ++HP
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHP 73

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHS 127
           N+V+L  V       YII EF+T G L D +    R  +          Q+  A+ +   
Sbjct: 74  NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 133

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT-TCGTPNYVAPEVLSNRGY 186
           K   HRDL   N L+     +KV+DFGLS L        H        + APE L+   +
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193

Query: 187 DGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKINA-AEFSCPFWFSTGATSLIHKI 244
               +DVW+ GV+L+ +   G  P+   DL  +Y+ +        P         L+   
Sbjct: 194 S-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 252

Query: 245 LDPNPKTRIRIEGIRKHPWFRKNYNPVKCSEEEEVNL 281
              NP  R     I +   F   +     S+E E  L
Sbjct: 253 WQWNPSDRPSFAEIHQ--AFETMFQESSISDEVEKEL 287

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  191 bits (485), Expect = 3e-59
 Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 12/261 (4%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRET---GESVAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
             +   +G+G+F  VR  +         SVA+K L    + +   +D   RE++ M  + 
Sbjct: 10  LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCH 126
           H N++RL+ V+ +   + ++ E    G L D++  HQG  L     RY  Q+ + + +  
Sbjct: 70  HRNLIRLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSN 183
           SK   HRDL   NLLL +   +K+ DFGL     Q  +             + APE L  
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188

Query: 184 RGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEFSCPFW--FSTGATSL 240
           R +   A+D W  GV L+ +   G  P+   +   +  KI+      P          ++
Sbjct: 189 RTFS-HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247

Query: 241 IHKILDPNPKTRIRIEGIRKH 261
           + +     P+ R     +R  
Sbjct: 248 MVQCWAHKPEDRPTFVALRDF 268

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (477), Expect = 6e-58
 Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 15/259 (5%)

Query: 17  IGEGTFAKVRFAQNRETGES--VAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRL 74
           +G G F  VR    R   +   VA+KVL + T  +    +++ RE  IM  + +P IVRL
Sbjct: 17  LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRL 74

Query: 75  HEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHR 133
             V      + +++E   GG L   +V  +  +  ++      Q+   + +   K   HR
Sbjct: 75  IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHR 133

Query: 134 DLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT---CGTPNYVAPEVLSNRGYDGSA 190
           DL   N+LL +    K+SDFGLS                     + APE ++ R +  S 
Sbjct: 134 DLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS-SR 192

Query: 191 ADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKILDPN 248
           +DVWS GV ++  ++ G  P+ +   P +   I   +   CP        +L+       
Sbjct: 193 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYK 252

Query: 249 PKTRIRIEGIR---KHPWF 264
            + R     +    +  ++
Sbjct: 253 WEDRPDFLTVEQRMRACYY 271

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (477), Expect = 1e-57
 Identities = 79/297 (26%), Positives = 123/297 (41%), Gaps = 40/297 (13%)

Query: 6   RRVAKYEVGRTIGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           R   +YE    IGEG + KV  A++ +  G  VA+K +   T  +  M     RE+++++
Sbjct: 4   RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG-EEGMPLSTIREVAVLR 62

Query: 65  I---VRHPNIVRLHEVLAS-----RTKVYIILEFVTGGEL-FDKIVHQGRLLENDCRRYF 115
                 HPN+VRL +V         TK+ ++ E V      +   V +  +     +   
Sbjct: 63  HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM 122

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
            QL+  +   HS  V HRDLKP+N+L+ S G +K++DFGL+ +    +  L +   T  Y
Sbjct: 123 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWY 181

Query: 176 VAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAEFSCPF--- 231
            APEVL    Y  +  D+WS G I   +      F G +D+  L K ++           
Sbjct: 182 RAPEVLLQSSYA-TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 240

Query: 232 -----------------------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
                                          L+ K L  NP  RI       HP+F+
Sbjct: 241 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (473), Expect = 2e-57
 Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 14/262 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
             ++   +G G F +V           VA+K L + ++      D    E ++MK ++H 
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 68

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHS 127
            +VRL+ V+ ++  +YII E++  G L D +      +L  N       Q+ + +A    
Sbjct: 69  RLVRLYAVV-TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSA-LPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
           +   HRDL+  N+L+    + K++DFGL+  +                + APE + N G 
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI-NYGT 186

Query: 187 DGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIHKI 244
               +DVWS G++L  ++  G +P+     P + + +        P         L+   
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLC 246

Query: 245 LDPNPKTRIRIEGIRK--HPWF 264
               P+ R   + +R     +F
Sbjct: 247 WKERPEDRPTFDYLRSVLEDFF 268

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (471), Expect = 7e-57
 Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 14/265 (5%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
              +   +G+G F +V       T   VA+K L   T+      +   +E  +MK +RH 
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSP----EAFLQEAQVMKKLRHE 72

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR--LLENDCRRYFQQLIDAVAHCHS 127
            +V+L+ V+ S   +YI+ E+++ G L D +  +    L          Q+   +A+   
Sbjct: 73  KLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 131

Query: 128 KGVYHRDLKPENLLLDSYGNLKVSDFGLS-ALPQQGVELLHTTCGTPNYVAPEVLSNRGY 186
               HRDL+  N+L+      KV+DFGL+  +                + APE      +
Sbjct: 132 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRF 191

Query: 187 DGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIHKI 244
               +DVWS G++L  +   G +P+       +  ++       CP         L+ + 
Sbjct: 192 T-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 250

Query: 245 LDPNPKTRIRIEGIRK--HPWFRKN 267
               P+ R   E ++     +F   
Sbjct: 251 WRKEPEERPTFEYLQAFLEDYFTST 275

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  185 bits (471), Expect = 8e-57
 Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 21/271 (7%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIVR 67
            ++ + IG G F +V     +  G+    VA+K L      K R       E SIM    
Sbjct: 28  VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR--RDFLSEASIMGQFD 85

Query: 68  HPNIVRLHEVLASRTKVYIILEFVTGGELFD-KIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           HPN++ L  V+   T V II EF+  G L      + G+          + +   + +  
Sbjct: 86  HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA 145

Query: 127 SKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-----CGTPNYVAPEVL 181
                HRDL   N+L++S    KVSDFGLS   +        T          + APE +
Sbjct: 146 DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 205

Query: 182 SNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATS 239
             R +   A+DVWS G++++ +M+ G  P+ +     +   I        P    +    
Sbjct: 206 QYRKFTS-ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQ 264

Query: 240 LIHKILDPNPKTRI-------RIEGIRKHPW 263
           L+      +   R         ++ + ++P 
Sbjct: 265 LMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 295

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  186 bits (473), Expect = 1e-56
 Identities = 58/286 (20%), Positives = 107/286 (37%), Gaps = 37/286 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES-----VAMKVLAKSTILKHRMVDQIKREISIM- 63
             E G+ +G G F KV  A      ++     VA+K+L +      R  + +  E+ +M 
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER--EALMSELKMMT 95

Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ-------------------- 103
           ++  H NIV L         +Y+I E+   G+L + +  +                    
Sbjct: 96  QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155

Query: 104 ---GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL-- 158
                L   D   +  Q+   +     K   HRDL   N+L+     +K+ DFGL+    
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 215

Query: 159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPT 217
                 +         ++APE L    Y    +DVWS G++L+ + + G  P+    +  
Sbjct: 216 SDSNYVVRGNARLPVKWMAPESLFEGIYT-IKSDVWSYGILLWEIFSLGVNPYPGIPVDA 274

Query: 218 LYKKI--NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH 261
            + K+  N  +   PF+ +     ++      + + R     +   
Sbjct: 275 NFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 1e-56
 Identities = 57/255 (22%), Positives = 102/255 (40%), Gaps = 10/255 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
               + IG G F  V         + VA+K + +  + +    +    E  +M  + HP 
Sbjct: 7   LTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHPK 61

Query: 71  IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCHSKG 129
           +V+L+ V   +  + ++ EF+  G L D +  Q  L            + + +A+     
Sbjct: 62  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121

Query: 130 VYHRDLKPENLLLDSYGNLKVSDFGL-SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDG 188
           V HRDL   N L+     +KVSDFG+   +          T     + +PEV S   Y  
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS- 180

Query: 189 SAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIHKILD 246
           S +DVWS GV+++ + + G +P+       + + I        P   ST    +++    
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWK 240

Query: 247 PNPKTRIRIEGIRKH 261
             P+ R     + + 
Sbjct: 241 ERPEDRPAFSRLLRQ 255

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (468), Expect = 1e-56
 Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 11/259 (4%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES---VAMKVLAKSTILKHRMVDQIKREISIMKIV 66
           + E+GR IGEG F  V              VA+K     T     + ++  +E   M+  
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF 65

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFD-KIVHQGRLLENDCRRYFQQLIDAVAHC 125
            HP+IV+L  V+ +   V+II+E  T GEL     V +  L       Y  QL  A+A+ 
Sbjct: 66  DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT-CGTPNYVAPEVLSNR 184
            SK   HRD+   N+L+ S   +K+ DFGLS   +       +       ++APE ++ R
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184

Query: 185 GYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIH 242
            +   A+DVW  GV ++ +LM G  PF       +  +I N      P        SL+ 
Sbjct: 185 RFTS-ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMT 243

Query: 243 KILDPNPKTRIRIEGIRKH 261
           K    +P  R R   ++  
Sbjct: 244 KCWAYDPSRRPRFTELKAQ 262

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  185 bits (471), Expect = 1e-56
 Identities = 68/298 (22%), Positives = 121/298 (40%), Gaps = 52/298 (17%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRH 68
            Y++ R +G G +++V  A N    E V +K      ILK     +IKREI I++ +   
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKKKIKREIKILENLRGG 89

Query: 69  PNIVRLHEVLASRTK--VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH 126
           PNI+ L +++         ++ E V   +          L + D R Y  +++ A+ +CH
Sbjct: 90  PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 146

Query: 127 SKGVYHRDLKPENLLLDSYGN-LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRG 185
           S G+ HRD+KP N+++D     L++ D+GL+     G +  +    +  +  PE+L +  
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-QEYNVRVASRYFKGPELLVDYQ 205

Query: 186 YDGSAADVWSCGVILFVLMAGYLPFGETD--------------LPTLYKKINAAEFSCPF 231
               + D+WS G +L  ++    PF                     LY  I+        
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265

Query: 232 WF------------------------STGATSLIHKILDPNPKTRIRIEGIRKHPWFR 265
            F                        S  A   + K+L  + ++R+      +HP+F 
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFY 323

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (469), Expect = 2e-56
 Identities = 57/270 (21%), Positives = 97/270 (35%), Gaps = 21/270 (7%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIM-KIVRHP 69
            +    IGEG F +V  A+ ++ G  +   +                 E+ ++ K+  HP
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 70  NIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRR 113
           NI+ L      R  +Y+ +E+   G L D +                     L       
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 114 YFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTP 173
           +   +   + +   K   HRDL   N+L+      K++DFGLS   +  V+         
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK-KTMGRLPV 190

Query: 174 NYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI-NAAEFSCPF 231
            ++A E L N     + +DVWS GV+L+ ++  G  P+       LY+K+        P 
Sbjct: 191 RWMAIESL-NYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPL 249

Query: 232 WFSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                   L+ +     P  R     I   
Sbjct: 250 NCDDEVYDLMRQCWREKPYERPSFAQILVS 279

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 1e-55
 Identities = 56/293 (19%), Positives = 109/293 (37%), Gaps = 11/293 (3%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAK--STILKHRMVDQIKREISIMKIVRH 68
           ++  + +G G F  V        GE V + V  K        +   +I  E  +M  V +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
           P++ RL  +  + T   I      G  L     H+  +       +  Q+   + +   +
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 130

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC--GTPNYVAPEVLSNRGY 186
            + HRDL   N+L+ +  ++K++DFGL+ L     +  H         ++A E + +R Y
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190

Query: 187 DGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSLIHKI 244
               +DVWS GV ++ LM  G  P+       +   +   E    P   +     ++ K 
Sbjct: 191 THQ-SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKC 249

Query: 245 LDPNPKTRIRIEGIRKHPWF----RKNYNPVKCSEEEEVNLDDVHAVFDDIED 293
              +  +R +   +           + Y  ++  E   +        +  + D
Sbjct: 250 WMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMD 302

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  180 bits (457), Expect = 9e-55
 Identities = 53/283 (18%), Positives = 101/283 (35%), Gaps = 28/283 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y +GR IG G+F  +    +   GE VA+K+    T        Q+  E  I K+++  
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMMQGG 62

Query: 70  N-IVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
             I  +    A      +++E +             +           Q+I  + + HSK
Sbjct: 63  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 122

Query: 129 GVYHRDLKPENLLLDSYG---NLKVSDFGLSALPQQGVELLH-------TTCGTPNYVAP 178
              HRD+KP+N L+        + + DFGL+   +      H          GT  Y + 
Sbjct: 123 NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASI 182

Query: 179 EVLSNRGYDGSAADVWSCGVILFVLMAGYLPF---GETDLPTLYKKINAAEFSCPFW--- 232
                        D+ S G +L     G LP+           Y++I+  + S P     
Sbjct: 183 NTHLGIEQS-RRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLC 241

Query: 233 --FSTGATSLIHKILDPNPKTRIRIEGIR---KHPWFRKNYNP 270
             + +   + ++         +     +R   ++ + R+ ++ 
Sbjct: 242 KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 284

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (443), Expect = 7e-53
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 20/269 (7%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGES----VAMKVLAKSTILKHRMVDQIKREISIMKIV 66
               + IG G F +V     + +       VA+K L      K R+      E  IM   
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV--DFLGEAGIMGQF 66

Query: 67  RHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHC 125
            H NI+RL  V++    + II E++  G L   +    G           + +   + + 
Sbjct: 67  SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL 126

Query: 126 HSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC---GTPNYVAPEVLS 182
            +    HRDL   N+L++S    KVSDFGLS + +   E  +TT        + APE +S
Sbjct: 127 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAIS 186

Query: 183 NRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSL 240
            R +  SA+DVWS G++++ +M  G  P+ E     + K IN       P    +    L
Sbjct: 187 YRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQL 245

Query: 241 IHKILDPNPKTRI-------RIEGIRKHP 262
           + +        R         ++ + + P
Sbjct: 246 MMQCWQQERARRPKFADIVSILDKLIRAP 274

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 3e-52
 Identities = 75/334 (22%), Positives = 126/334 (37%), Gaps = 54/334 (16%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
           +Y+  + IG G    V  A +     +VA+K L++          +  RE+ +MK V H 
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHK 76

Query: 70  NIVRLHEV------LASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVA 123
           NI+ L  V      L     VY+++E +         V Q  L          Q++  + 
Sbjct: 77  NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIK 133

Query: 124 HCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSN 183
           H HS G+ HRDLKP N+++ S   LK+ DFGL+        ++     T  Y APEV+  
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-FMMTPYVVTRYYRAPEVILG 192

Query: 184 RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWF---------- 233
            GY     D+WS G I+  ++   + F   D    + K+     +    F          
Sbjct: 193 MGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN 251

Query: 234 --------------------------------STGATSLIHKILDPNPKTRIRIEGIRKH 261
                                           ++ A  L+ K+L  +P  RI ++   +H
Sbjct: 252 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311

Query: 262 PWFRKNYNPVKCSEEEEVNLDDVHAVFDDIEDQY 295
           P+    Y+P +         D      +   +++
Sbjct: 312 PYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW 345

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (430), Expect = 1e-50
 Identities = 63/280 (22%), Positives = 102/280 (36%), Gaps = 32/280 (11%)

Query: 10  KYEVGRTIGEGTFAKVRFAQ-----NRETGESVAMKVLAKSTILKHRMVDQIKREISIM- 63
           +   G+T+G G F KV  A        +   +VA+K+L  S  L  R  + +  E+ ++ 
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTER--EALMSELKVLS 81

Query: 64  KIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKI------------------VHQGR 105
            +  H NIV L           +I E+   G+L + +                    +  
Sbjct: 82  YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141

Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           L   D   +  Q+   +A   SK   HRDL   N+LL      K+ DFGL+   +     
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201

Query: 166 LHTT--CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF--GETDLPTLYKK 221
           +          ++APE + N       +DVWS G+ L+ L +       G       YK 
Sbjct: 202 VVKGNARLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260

Query: 222 INAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK 260
           I        P         ++    D +P  R   + I +
Sbjct: 261 IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  169 bits (428), Expect = 2e-50
 Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 36/284 (12%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
             E  R IGEG F +V  A+       E    VA+K+L +       M    +RE ++M 
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMA 71

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGR------------------- 105
              +PNIV+L  V A    + ++ E++  G+L + +                        
Sbjct: 72  EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131

Query: 106 -----LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSAL-- 158
                L   +     +Q+   +A+   +   HRDL   N L+     +K++DFGLS    
Sbjct: 132 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 191

Query: 159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYL-PFGETDLPT 217
                +          ++ PE +    Y  + +DVW+ GV+L+ + +  L P+       
Sbjct: 192 SADYYKADGNDAIPIRWMPPESIFYNRYT-TESDVWAYGVVLWEIFSYGLQPYYGMAHEE 250

Query: 218 LYKKINAAEF-SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK 260
           +   +      +CP        +L+       P  R     I +
Sbjct: 251 VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  167 bits (424), Expect = 5e-50
 Identities = 48/272 (17%), Positives = 94/272 (34%), Gaps = 27/272 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH- 68
            Y+VGR IGEG+F  +    N    + VA+K   + +        Q++ E    K++   
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGC 60

Query: 69  PNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSK 128
             I  ++          ++++ +         +   +          +Q++  V   H K
Sbjct: 61  TGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 120

Query: 129 GVYHRDLKPENLLLDSY-----GNLKVSDFGLSALPQQGVE-------LLHTTCGTPNYV 176
            + +RD+KP+N L+          + V DFG+    +  V              GT  Y+
Sbjct: 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYM 180

Query: 177 APEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTL---YKKINAAEFSCPFW- 232
           +      R       D+ + G +    + G LP+      T    Y++I   + S P   
Sbjct: 181 SINTHLGREQS-RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 239

Query: 233 ----FSTGATSLIHKILDPNPKTRIRIEGIRK 260
               F       +H   +         + ++ 
Sbjct: 240 LCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 5e-49
 Identities = 57/282 (20%), Positives = 109/282 (38%), Gaps = 28/282 (9%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           K  + R +G+G+F  V     +     E    VA+K + ++  ++ R   +   E S+MK
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER--IEFLNEASVMK 78

Query: 65  IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLEN----------DCRRY 114
                ++VRL  V++      +I+E +T G+L   +      + N             + 
Sbjct: 79  EFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 138

Query: 115 FQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT--CGT 172
             ++ D +A+ ++    HRDL   N ++     +K+ DFG++    +             
Sbjct: 139 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 198

Query: 173 PNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPTLYKKINAAE-FSCP 230
             +++PE L +  +    +DVWS GV+L+ +      P+       + + +        P
Sbjct: 199 VRWMSPESLKDGVFTT-YSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 257

Query: 231 FWFSTGATSLIHKILDPNPKTRIRIEGIRK------HPWFRK 266
                    L+      NPK R     I         P FR+
Sbjct: 258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE 299

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (418), Expect = 7e-49
 Identities = 64/278 (23%), Positives = 106/278 (38%), Gaps = 20/278 (7%)

Query: 14  GRTIGEGTFAKV---RFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN 70
              IG G F  V       N       A+K L + T      V Q   E  IMK   HPN
Sbjct: 32  NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPN 89

Query: 71  IVRLHEV-LASRTKVYIILEFVTGGELFDKIVHQGRLL-ENDCRRYFQQLIDAVAHCHSK 128
           ++ L  + L S     ++L ++  G+L + I ++       D   +  Q+   +    SK
Sbjct: 90  VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149

Query: 129 GVYHRDLKPENLLLDSYGNLKVSDFGLSAL----PQQGVELLHTTCGTPNYVAPEVLSNR 184
              HRDL   N +LD    +KV+DFGL+          V           ++A E L  +
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 209

Query: 185 GYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKI-NAAEFSCPFWFSTGATSLIH 242
            +  + +DVWS GV+L+ LM  G  P+ + +   +   +        P +       ++ 
Sbjct: 210 KFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVML 268

Query: 243 KILDPNPKTRIRIEGIRKH------PWFRKNYNPVKCS 274
           K   P  + R     +          +  ++Y  V  +
Sbjct: 269 KCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNAT 306

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (416), Expect = 9e-49
 Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 31/280 (11%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGES-------VAMKVLAKSTILKHRMVDQIKREISI 62
           +  +G+ +GEG F +V  A+     +        VA+K+L        + +  +  E+ +
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT--EKDLSDLISEMEM 71

Query: 63  MK-IVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQG----------------R 105
           MK I +H NI+ L         +Y+I+E+ + G L + +  +                 +
Sbjct: 72  MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131

Query: 106 LLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL 165
           L   D      Q+   + +  SK   HRDL   N+L+     +K++DFGL+         
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191

Query: 166 LHT--TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILF-VLMAGYLPFGETDLPTLYKKI 222
             T        ++APE L +R Y    +DVWS GV+L+ +   G  P+    +  L+K +
Sbjct: 192 KKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250

Query: 223 NAAE-FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                   P   +     ++       P  R   + + + 
Sbjct: 251 KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 290

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 1e-45
 Identities = 57/294 (19%), Positives = 111/294 (37%), Gaps = 50/294 (17%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHP 69
              +  +IG+G F +V     +  GE VA+K+ +     +       + EI    ++RH 
Sbjct: 4   TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIYQTVMLRHE 57

Query: 70  NIVRLHEVL----ASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHC 125
           NI+           + T+++++ ++   G LFD + ++  +      +        +AH 
Sbjct: 58  NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHL 116

Query: 126 HS--------KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT----CGTP 173
           H           + HRDLK +N+L+   G   ++D GL+       + +        GT 
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176

Query: 174 NYVAPEVLSNR-----GYDGSAADVWSCGVILFVLMAGYLPFG---------------ET 213
            Y+APEVL +            AD+++ G++ + +       G               + 
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236

Query: 214 DLPTLYKKINAAEFSCPF---WFSTGATSLIHKI----LDPNPKTRIRIEGIRK 260
            +  + K +   +        W S  A  ++ KI       N   R+    I+K
Sbjct: 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (394), Expect = 2e-45
 Identities = 54/279 (19%), Positives = 103/279 (36%), Gaps = 29/279 (10%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMK 64
           + ++G+ +G G F +V  A         T  +VA+K+L +           +     ++ 
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR-ALMSELKILIH 72

Query: 65  IVRHPNIVRLHEV-LASRTKVYIILEFVTGGELFDKI----------------VHQGRLL 107
           I  H N+V L          + +I+EF   G L   +                +++  L 
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 108 ENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH 167
                 Y  Q+   +    S+   HRDL   N+LL     +K+ DFGL+    +  + + 
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 192

Query: 168 TT--CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY-LPFGETDLPTLYKKI-- 222
                    ++APE + +R Y    +DVWS GV+L+ + +    P+    +   + +   
Sbjct: 193 KGDARLPLKWMAPETIFDRVYTIQ-SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 251

Query: 223 NAAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH 261
                  P + +      +       P  R     + +H
Sbjct: 252 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  140 bits (353), Expect = 7e-39
 Identities = 54/328 (16%), Positives = 112/328 (34%), Gaps = 71/328 (21%)

Query: 10  KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK-------REISI 62
           +Y + R +G G F+ V  A++      VAMK++    +      D+IK        + + 
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 63  MKIVRHPNIVRLHEVLASRTKVYIILEFVT-----GGELFDKIVHQGRLLENDCRRYFQQ 117
              +   +I++L +    +    + +  V            K      +     ++  +Q
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 118 LIDAVAHCHSK-GVYHRDLKPENLLLDSYG------NLKVSDFGLSALPQQGVELLHTTC 170
           L+  + + H + G+ H D+KPEN+L++          +K++D G +    +       + 
Sbjct: 134 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY---TNSI 190

Query: 171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK---------- 220
            T  Y +PEVL    +    AD+WS   ++F L+ G   F   +  +  K          
Sbjct: 191 QTREYRSPEVLLGAPWG-CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249

Query: 221 --------------------------------------KINAAEFSCPFWFSTGATSLIH 242
                                                  +   ++      +   +  + 
Sbjct: 250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 309

Query: 243 KILDPNPKTRIRIEGIRKHPWFRKNYNP 270
            +L  +P+ R    G+  HPW +     
Sbjct: 310 PMLQLDPRKRADAGGLVNHPWLKDTLGM 337

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 88.7 bits (219), Expect = 2e-21
 Identities = 30/211 (14%), Positives = 68/211 (32%), Gaps = 40/211 (18%)

Query: 11  YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTI---------------LKHRMVDQ 55
             +G+ +GEG  + V    + E      +K                           +  
Sbjct: 2   DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 56  IKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYF 115
            + E   ++ ++   + +++          +++E +             R+   +     
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAW----EGNAVLMELIDAK-------ELYRVRVENPDEVL 109

Query: 116 QQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTCGTPNY 175
             +++ VA  + +G+ H DL   N+L+   G + + DF  S      VE+          
Sbjct: 110 DMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWIIDFPQS------VEVGEEGWREILE 162

Query: 176 VAPEVLS---NRGYDGSAADVWSCGVILFVL 203
                +    +R Y  +  D+ S   I  +L
Sbjct: 163 RDVRNIITYFSRTY-RTEKDINS--AIDRIL 190

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	379
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.94
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.58
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.2
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.04
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.27
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.05
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.45
d1ul7a_	102	Map/microtubule affinity-regulating kinase 3 {Mous	95.1

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-67  Score=483.75  Aligned_cols=260  Identities=36%  Similarity=0.671  Sum_probs=241.9

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .+.+++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.++|||||++++++.+++.+
T Consensus         2 ~~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~   81 (263)
T d2j4za1           2 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV   81 (263)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CcchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEE
Confidence            35689999999999999999999999999999999999876555555567899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+|||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++......  
T Consensus        82 ~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~--  159 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--  159 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--
T ss_pred             EEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC--
Confidence            999999999999999999899999999999999999999999999999999999999999999999999999765442  


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                      .....+||+.|+|||++.+..| +.++|||||||++|+|++|+.||.+.+.......+....+.+|..+|+++.+||.+|
T Consensus       160 ~~~~~~Gt~~Y~APE~~~~~~~-~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  238 (263)
T d2j4za1         160 RRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRL  238 (263)
T ss_dssp             CCEETTEEGGGCCHHHHTTCCC-CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHHH
T ss_pred             cccccCCCCcccCHHHHcCCCC-CchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHH
Confidence            3456789999999999988776 499999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCChHhHhcCcccccc
Q 016991          245 LDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       245 L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      |++||++|||++|+++||||+.+
T Consensus       239 L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         239 LKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             TCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             ccCCHhHCcCHHHHHcCcCcCCc
Confidence            99999999999999999999753

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-66  Score=482.02  Aligned_cols=264  Identities=31%  Similarity=0.560  Sum_probs=239.4

Q ss_pred             CccceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            2 KKQTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         2 ~~~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ++...+.++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.++||||+++++++.+.
T Consensus         1 ~P~~~~p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~   80 (288)
T d1uu3a_           1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD   80 (288)
T ss_dssp             CCCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECS
T ss_pred             CCCCCCCCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEEC
Confidence            35666778999999999999999999999999999999999876655555667899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      +.+|+|||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|.....
T Consensus        81 ~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  160 (288)
T d1uu3a_          81 EKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  160 (288)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             CEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceeccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999986543


Q ss_pred             C--cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHH
Q 016991          162 G--VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATS  239 (379)
Q Consensus       162 ~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~  239 (379)
                      .  .....+.+||+.|+|||++.+..| +.++|||||||++|+|++|+.||.+.+...++++|....+.+|..+|+++++
T Consensus       161 ~~~~~~~~~~~GT~~Y~APE~~~~~~~-~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~  239 (288)
T d1uu3a_         161 ESKQARANSFVGTAQYVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARD  239 (288)
T ss_dssp             ---------CCCCGGGCCHHHHHTCCC-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTCCHHHHH
T ss_pred             CCcccccccccCCccccCceeeccCCC-CcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCccCCHHHHH
Confidence            2  233456789999999999988777 4899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHccCCCCCCCCChHh------HhcCccccc
Q 016991          240 LIHKILDPNPKTRIRIEG------IRKHPWFRK  266 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~------il~hp~f~~  266 (379)
                      ||.+||+.||++|||++|      +++||||+.
T Consensus       240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~  272 (288)
T d1uu3a_         240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFES  272 (288)
T ss_dssp             HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTT
T ss_pred             HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCC
Confidence            999999999999999998      578999964

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-65  Score=486.85  Aligned_cols=260  Identities=33%  Similarity=0.586  Sum_probs=244.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||+||+|+++.+|+.||||++++.........+.+.+|+.+|+.++||||+++++++.+.+.+|
T Consensus         2 i~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             CchHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccc
Confidence            46889999999999999999999999999999999998876555555678999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      +|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+........
T Consensus        82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999876555556


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHcc
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L  245 (379)
                      ..+.|||+.|+|||++.+.+| +.++|||||||++|+|++|++||.+.+...+.+.+....+.+|..+|+++.+||++||
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~~y-~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L  240 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL  240 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCB-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred             cccceeCHHHhhhhhccCCCC-ChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHhhc
Confidence            678899999999999998887 5899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCC-----hHhHhcCccccc
Q 016991          246 DPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       246 ~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      ++||.+|++     ++|+++||||+.
T Consensus       241 ~~dP~~R~~~~~~~~~eil~Hp~f~~  266 (337)
T d1o6la_         241 KKDPKQRLGGGPSDAKEVMEHRFFLS  266 (337)
T ss_dssp             CSSTTTSTTCSTTTHHHHHTSGGGTT
T ss_pred             cCCchhhcccccccHHHHHcCccccc
Confidence            999999994     899999999975

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-66  Score=477.75  Aligned_cols=260  Identities=38%  Similarity=0.668  Sum_probs=225.9

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      .+++|++++.||+|+||+||+|+++.+|+.||||++++.....  ..+.+.+|+.+|+.++|||||++++++.+.+.+|+
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~i   80 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL   80 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch--HHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEE
Confidence            4678999999999999999999999999999999998754322  34678999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--cc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--VE  164 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--~~  164 (379)
                      |||||+||+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|......  ..
T Consensus        81 vmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~  160 (271)
T d1nvra_          81 FLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER  160 (271)
T ss_dssp             EEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred             EEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccc
Confidence            9999999999999988889999999999999999999999999999999999999999999999999999865432  23


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcccCCC--CCCCHhHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEFSCP--FWFSTGATSLI  241 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~p--~~~s~~~~~li  241 (379)
                      ...+.+||+.|+|||++.+..+++.++|||||||++|+|++|++||...+.. ..+..+.......+  ..+|+++.+||
T Consensus       161 ~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  240 (271)
T d1nvra_         161 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALL  240 (271)
T ss_dssp             CBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHH
T ss_pred             cccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHH
Confidence            3456789999999999998888778899999999999999999999776543 33444443333332  35799999999


Q ss_pred             HHccCCCCCCCCChHhHhcCccccccC
Q 016991          242 HKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      .+||+.||++|||++|+++||||++..
T Consensus       241 ~~~L~~dP~~R~t~~eil~hpwf~~~l  267 (271)
T d1nvra_         241 HKILVENPSARITIPDIKKDRWYNKPL  267 (271)
T ss_dssp             HHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HHHcCCChhHCcCHHHHhcCHhhCcCC
Confidence            999999999999999999999998643

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-64  Score=470.68  Aligned_cols=253  Identities=26%  Similarity=0.447  Sum_probs=227.2

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++.+.||+|+||+||+|+++.+|+.||||++.......   .+.+.+|+.+|+.++|||||++++++.+.+.+|+||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~---~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSC---HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChH---HHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            47999999999999999999999999999999997654332   367899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccc
Q 016991           89 EFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHT  168 (379)
Q Consensus        89 E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~  168 (379)
                      |||+||+|.+++.+ +.+++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|............
T Consensus        97 Ey~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~  175 (293)
T d1yhwa1          97 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (293)
T ss_dssp             ECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             EecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccc
Confidence            99999999987765 67999999999999999999999999999999999999999999999999999876555455667


Q ss_pred             cccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---ccCCCCCCCHhHHHHHHHcc
Q 016991          169 TCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---EFSCPFWFSTGATSLIHKIL  245 (379)
Q Consensus       169 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---~~~~p~~~s~~~~~li~~~L  245 (379)
                      .+||+.|+|||++.+..| +.++|||||||++|+|++|++||.+.+.......+...   .+..|..+|+++++||.+||
T Consensus       176 ~~gt~~Y~aPE~~~~~~~-~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L  254 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAY-GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCL  254 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCB-CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHT
T ss_pred             cccCCCccChhhhcCCCC-CchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHc
Confidence            889999999999988776 48999999999999999999999888776555544333   34456779999999999999


Q ss_pred             CCCCCCCCChHhHhcCccccc
Q 016991          246 DPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~  266 (379)
                      ++||.+|||++|+++||||+.
T Consensus       255 ~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         255 DMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             CSSTTTSCCHHHHTTCGGGGG
T ss_pred             cCChhHCcCHHHHhcCHhhCC
Confidence            999999999999999999974

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.9e-64  Score=471.85  Aligned_cols=256  Identities=33%  Similarity=0.699  Sum_probs=239.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ++++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.++|||||++++++.+.+.+|+
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeee
Confidence            57899999999999999999999999999999999987655455556789999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||||+||+|..++.....+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|.....   ..
T Consensus        82 vmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~---~~  158 (316)
T d1fota_          82 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD---VT  158 (316)
T ss_dssp             EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS---CB
T ss_pred             EeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc---cc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999976543   23


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccC
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  246 (379)
                      .+.+||+.|+|||++.+..|+ .++|||||||++|+|++|+.||.+.+.......+......+|..+|+++.++|.+||+
T Consensus       159 ~~~~Gt~~Y~APE~l~~~~y~-~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  237 (316)
T d1fota_         159 YTLCGTPDYIAPEVVSTKPYN-KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRLIT  237 (316)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBC-TTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTC
T ss_pred             ccccCcccccCHHHHcCCCCC-chhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhh
Confidence            467899999999999887775 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC-----ChHhHhcCccccc
Q 016991          247 PNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       247 ~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +||.+|+     |++++++||||+.
T Consensus       238 ~dp~~R~~~~r~t~~~il~Hp~f~~  262 (316)
T d1fota_         238 RDLSQRLGNLQNGTEDVKNHPWFKE  262 (316)
T ss_dssp             SCTTTCTTSSTTTTHHHHTSGGGSS
T ss_pred             hCHHhccccchhhHHHHHcCccccc
Confidence            9999996     9999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.1e-64  Score=469.33  Aligned_cols=259  Identities=38%  Similarity=0.703  Sum_probs=216.2

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...-++|++++.||+|+||+||+|+++.+|+.||||++.+.....  ..+.+.+|+.+|+.++|||||++++++.+++.+
T Consensus         5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~   82 (307)
T d1a06a_           5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIKHPNIVALDDIYESGGHL   82 (307)
T ss_dssp             SCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            344567999999999999999999999999999999998765433  235688999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc---cCCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD---SYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~---~~~~lkl~DfGl~~~~~~  161 (379)
                      |+|||||+||+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||+.   +++.+||+|||++.....
T Consensus        83 ~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             EEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            99999999999999999989999999999999999999999999999999999999994   578999999999976544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                      . ....+.+||+.|+|||++.+..| +.++|||||||++|+|++|++||.+.+.......+....+..+    ..+|+++
T Consensus       163 ~-~~~~~~~GT~~y~APE~~~~~~~-~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  240 (307)
T d1a06a_         163 G-SVLSTACGTPGYVAPEVLAQKPY-SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSA  240 (307)
T ss_dssp             -----------CTTSCHHHHTTCCC-CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred             C-CeeeeeeeCccccCcHHHcCCCC-CcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHH
Confidence            3 34567789999999999988777 4899999999999999999999999988888888887766543    4689999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      .+||.+||++||++|||++|+++||||+..
T Consensus       241 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         241 KDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             HHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999999753

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-64  Score=461.77  Aligned_cols=256  Identities=30%  Similarity=0.558  Sum_probs=218.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS--RTKV   84 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~--~~~~   84 (379)
                      +.++|++.+.||+|+||+||+|+++.+|+.||||++.+.... ....+.+.+|+.+|+.++|||||++++++.+  .+.+
T Consensus         2 r~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   80 (269)
T d2java1           2 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL   80 (269)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CE
T ss_pred             CchhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEE
Confidence            468999999999999999999999999999999999876543 3345779999999999999999999999864  5679


Q ss_pred             EEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeecCCCCcEEEccCCCeEEeeecc
Q 016991           85 YIILEFVTGGELFDKIVH----QGRLLENDCRRYFQQLIDAVAHCHSKG-----VYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qil~~l~ylH~~g-----i~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                      |+|||||+||+|.+++.+    .+.+++..++.++.||+.||+|||++|     |+||||||+|||++.+|.+||+|||+
T Consensus        81 ~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~  160 (269)
T d2java1          81 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  160 (269)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHH
T ss_pred             EEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccc
Confidence            999999999999998864    457999999999999999999999976     99999999999999999999999999


Q ss_pred             ccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-CCCCCCC
Q 016991          156 SALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-SCPFWFS  234 (379)
Q Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-~~p~~~s  234 (379)
                      +...........+.+||+.|+|||++.+..| +.++|||||||++|+|++|+.||.+.+..++...+....+ ..|..+|
T Consensus       161 a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~-~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s  239 (269)
T d2java1         161 ARILNHDTSFAKAFVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYS  239 (269)
T ss_dssp             HHHC-----------CCCSCCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSC
T ss_pred             eeecccCCCccccCCCCcccCCHHHHcCCCC-ChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcccC
Confidence            9876655455667899999999999987776 4899999999999999999999999998888888877765 4677899


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcCccc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKHPWF  264 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~hp~f  264 (379)
                      +++.+||.+||++||++|||++|+++|||+
T Consensus       240 ~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         240 DELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            999999999999999999999999999995

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-64  Score=464.98  Aligned_cols=257  Identities=29%  Similarity=0.459  Sum_probs=227.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      -+.|++++.||+|+||+||+|+++.+|..||||++.+..   ....+.+.+|+.+|+.++|||||++++++.+.+.+|+|
T Consensus        11 ~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lv   87 (288)
T d2jfla1          11 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL   87 (288)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEE
Confidence            457999999999999999999999999999999997643   22346788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           88 LEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      ||||+||+|.+++.+ .+.+++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|..........
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~  167 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  167 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHH
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccc
Confidence            999999999998765 4579999999999999999999999999999999999999999999999999987654433445


Q ss_pred             cccccCCCCCchhhhcc----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---cCCCCCCCHhHHH
Q 016991          167 HTTCGTPNYVAPEVLSN----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---FSCPFWFSTGATS  239 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---~~~p~~~s~~~~~  239 (379)
                      .+.+||+.|+|||++..    ...++.++|||||||++|+|++|++||.+.+..+....+....   ...|..+|+++.+
T Consensus       168 ~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~  247 (288)
T d2jfla1         168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKD  247 (288)
T ss_dssp             TCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHH
T ss_pred             cccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHH
Confidence            57889999999999852    2223589999999999999999999999988888777777664   3345678999999


Q ss_pred             HHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          240 LIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       240 li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      ||.+||++||++|||++|+++||||+..
T Consensus       248 li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         248 FLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             HHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999999999999743

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.5e-63  Score=473.19  Aligned_cols=258  Identities=32%  Similarity=0.647  Sum_probs=240.3

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...+++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.++|||||++++++.....+
T Consensus        37 ~~~ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~  116 (350)
T d1rdqe_          37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNL  116 (350)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             CCCccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccc
Confidence            34578999999999999999999999999999999999876655555567899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      |+||||+.||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|......  
T Consensus       117 ~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             ccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999866432  


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHc
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  244 (379)
                       ..+.+||+.|+|||++.+.+|+ .++|||||||++|+|++|++||.+.+.......+....+..|..+|+++.+||++|
T Consensus       195 -~~~~~Gt~~Y~APE~~~~~~~~-~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~  272 (350)
T d1rdqe_         195 -TWTLCGTPEALAPEIILSKGYN-KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNL  272 (350)
T ss_dssp             -BCCCEECGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHHH
T ss_pred             -cccccCccccCCHHHHcCCCCC-ccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCCccCCHHHHHHHHHH
Confidence             3467899999999999887774 89999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCC-----ChHhHhcCccccc
Q 016991          245 LDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       245 L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      |++||.+|+     |++++++||||+.
T Consensus       273 L~~dP~kR~~~~r~t~~ell~Hp~f~~  299 (350)
T d1rdqe_         273 LQVDLTKRFGNLKNGVNDIKNHKWFAT  299 (350)
T ss_dssp             SCSCTTTCTTSSTTTTHHHHTSGGGTT
T ss_pred             hhhCHHhccccccccHHHHHcCccccC
Confidence            999999995     9999999999975

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-63  Score=466.93  Aligned_cols=258  Identities=30%  Similarity=0.581  Sum_probs=237.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHH-hCCCCCcceEEEEEEeCCeEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~-~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      +++|++++.||+|+||+||+|.++.+|+.||||++.+.........+.+..|+.++. .++|||||++++++.+++.+|+
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence            478999999999999999999999999999999998765444444566667777664 7899999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccc
Q 016991           87 ILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELL  166 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~  166 (379)
                      |||||+||+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++..........
T Consensus        81 vmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~  160 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT  160 (320)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCB
T ss_pred             EEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998765554556


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHHHHHccC
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSLIHKILD  246 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~  246 (379)
                      ...+||+.|+|||++.+..|+ .++|||||||++|+|++|+.||.+.+...+...+....+.+|..+|+++.+||++||+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L~  239 (320)
T d1xjda_         161 NTFCGTPDYIAPEILLGQKYN-HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV  239 (320)
T ss_dssp             CCCCSCGGGCCHHHHTTCCBC-THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSC
T ss_pred             cccCCCCCcCCHHHHcCCCCC-chhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccCCHHHHHHHHHhcc
Confidence            677899999999999988775 8999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCChH-hHhcCccccc
Q 016991          247 PNPKTRIRIE-GIRKHPWFRK  266 (379)
Q Consensus       247 ~dP~~R~s~~-~il~hp~f~~  266 (379)
                      .||.+|||+. ++++||||+.
T Consensus       240 ~dP~~R~s~~~~l~~hpff~~  260 (320)
T d1xjda_         240 REPEKRLGVRGDIRQHPLFRE  260 (320)
T ss_dssp             SSGGGSBTTBSCGGGSGGGTT
T ss_pred             cCCCCCcCHHHHHHhCchhcc
Confidence            9999999995 8999999975

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-62  Score=458.00  Aligned_cols=259  Identities=34%  Similarity=0.600  Sum_probs=233.5

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccch---HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKH---RMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ..-++|++++.||+|+||+||+|+++.+|+.||||++.+......   ...+.+.+|+.+|+.++|||||++++++.+.+
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~   86 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT   86 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            345689999999999999999999999999999999987543322   23577999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC----CeEEeeeccccC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG----NLKVSDFGLSAL  158 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~----~lkl~DfGl~~~  158 (379)
                      .+|+|||||+||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|    ++||+|||++..
T Consensus        87 ~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          87 DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhh
Confidence            9999999999999999999989999999999999999999999999999999999999998877    599999999976


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCC
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFS  234 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s  234 (379)
                      .... ....+.+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+.+.......+....+.++    ..+|
T Consensus       167 ~~~~-~~~~~~~~t~~y~APE~~~~~~~-~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  244 (293)
T d1jksa_         167 IDFG-NEFKNIFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTS  244 (293)
T ss_dssp             CTTS-CBCSCCCCCGGGCCHHHHTTCCB-CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             cCCC-ccccccCCCCcccCHHHHcCCCC-CCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence            6543 33456789999999999987666 5999999999999999999999999998888888888776654    4689


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      +++++||++||+.||++|||++|+++||||+.
T Consensus       245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  276 (293)
T d1jksa_         245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  276 (293)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence            99999999999999999999999999999975

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6e-63  Score=462.83  Aligned_cols=254  Identities=25%  Similarity=0.373  Sum_probs=228.3

Q ss_pred             CeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 016991           10 KYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILE   89 (379)
Q Consensus        10 ~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E   89 (379)
                      +|++.+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+|+.++|||||++++++.+.+.+|+|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            59999999999999999999999999999999987766566667789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccccc
Q 016991           90 FVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTT  169 (379)
Q Consensus        90 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~  169 (379)
                      ||.||+|..++...+++++.+++.++.||+.||.|||++||+||||||+|||++.+|++||+|||++.....    ....
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----~~~~  171 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----ANSF  171 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----BCCC
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC----CCcc
Confidence            999999988888888999999999999999999999999999999999999999999999999999976543    2456


Q ss_pred             ccCCCCCchhhhccC--CCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC--CCCCCCHhHHHHHHHcc
Q 016991          170 CGTPNYVAPEVLSNR--GYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS--CPFWFSTGATSLIHKIL  245 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~--~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~~L  245 (379)
                      +||+.|+|||++.+.  +.++.++|||||||++|+|++|..||.+.+.......+......  .+..+|+++.+||.+||
T Consensus       172 ~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L  251 (309)
T d1u5ra_         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCL  251 (309)
T ss_dssp             CSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHT
T ss_pred             ccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHC
Confidence            899999999999643  23458999999999999999999999988877766666655443  34458999999999999


Q ss_pred             CCCCCCCCChHhHhcCcccccc
Q 016991          246 DPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       246 ~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +.||.+|||++|+++||||...
T Consensus       252 ~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         252 QKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             CSSGGGSCCHHHHTTCHHHHSC
T ss_pred             cCChhHCcCHHHHHhCHHhcCC
Confidence            9999999999999999999764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.7e-62  Score=467.32  Aligned_cols=261  Identities=30%  Similarity=0.612  Sum_probs=233.6

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      ...+++|++++.||+|+||+||+|+++.+|+.||||++.+..   ....+.+.+|+.+|+.++|||||++++++.+.+.+
T Consensus        22 ~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   98 (350)
T d1koaa2          22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM   98 (350)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEE
T ss_pred             CCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            346789999999999999999999999999999999997643   22346789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc--cCCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD--SYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~--~~~~lkl~DfGl~~~~~~  161 (379)
                      |+|||||+||+|.+++.. .+++++..++.++.||+.||.|||++||+||||||+|||++  .++.+||+|||++.....
T Consensus        99 ~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~  178 (350)
T d1koaa2          99 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP  178 (350)
T ss_dssp             EEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCT
T ss_pred             EEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccc
Confidence            999999999999999954 46799999999999999999999999999999999999996  467899999999976544


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~  237 (379)
                      . ....+.+||+.|+|||++.+..| +.++|||||||++|+|++|+.||.+.+.......+....+..+.    .+|+++
T Consensus       179 ~-~~~~~~~gT~~Y~aPEv~~~~~~-~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  256 (350)
T d1koaa2         179 K-QSVKVTTGTAEFAAPEVAEGKPV-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  256 (350)
T ss_dssp             T-SCEEEECSCTTTCCHHHHHTCCB-CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHH
T ss_pred             c-cccceecCcccccCHHHHcCCCC-ChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            3 34457789999999999988777 48999999999999999999999999988888888887766553    589999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      ++||.+||+.||++|||++|+++||||+....+
T Consensus       257 ~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~~  289 (350)
T d1koaa2         257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGNAP  289 (350)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcccCCCCCC
Confidence            999999999999999999999999999876443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.7e-62  Score=467.56  Aligned_cols=260  Identities=27%  Similarity=0.558  Sum_probs=233.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      +...++|++++.||+|+||+||+|+++.+|+.||||++.+...   ...+.+.+|+.+|+.++|||||++++++.+++.+
T Consensus        25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~  101 (352)
T d1koba_          25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEM  101 (352)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEE
T ss_pred             CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch---hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            3456789999999999999999999999999999999976532   2346788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc--cCCCeEEeeeccccCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD--SYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~--~~~~lkl~DfGl~~~~~~  161 (379)
                      |+|||||+||+|.+.+...+ ++++.+++.++.||+.||+|||++||+||||||+|||++  .+|.+||+|||+|.....
T Consensus       102 ~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~  181 (352)
T d1koba_         102 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP  181 (352)
T ss_dssp             EEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred             EEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCC
Confidence            99999999999999876544 799999999999999999999999999999999999998  578999999999987654


Q ss_pred             CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCC----CCCCHhH
Q 016991          162 GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCP----FWFSTGA  237 (379)
Q Consensus       162 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~  237 (379)
                      . ....+.+||+.|+|||++.+..| +.++|||||||++|+|++|.+||.+.+.......+....+.+|    ..+|+++
T Consensus       182 ~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  259 (352)
T d1koba_         182 D-EIVKVTTATAEFAAPEIVDREPV-GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA  259 (352)
T ss_dssp             T-SCEEEECSSGGGCCHHHHTTCCB-CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred             C-CceeeccCcccccCHHHHcCCCC-CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            3 34567789999999999988776 5899999999999999999999999998888888888776655    4589999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                      .+||.+||+.||.+|||++|+++||||+....
T Consensus       260 ~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~  291 (352)
T d1koba_         260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  291 (352)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence            99999999999999999999999999987543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-63  Score=467.03  Aligned_cols=256  Identities=25%  Similarity=0.404  Sum_probs=218.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..-++|++++.||+|+||+||+|+++.+|+.||||++++..  .....+.+.+|+.+|+.++|||||++++++.+.+.+|
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~   80 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   80 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEE
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            34578999999999999999999999999999999997653  2334578899999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE  164 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~  164 (379)
                      +||||++||+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|++||+|||+|.....  .
T Consensus        81 iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~--~  158 (322)
T d1s9ja_          81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID--S  158 (322)
T ss_dssp             EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH--H
T ss_pred             EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCC--C
Confidence            999999999999999998999999999999999999999997 5999999999999999999999999999875432  2


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-----------------------
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKK-----------------------  221 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~-----------------------  221 (379)
                      ...+.+||+.|+|||++.+..| +.++||||+||++|+|++|+.||.+.+.......                       
T Consensus       159 ~~~~~~GT~~Y~APEvl~~~~y-~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (322)
T d1s9ja_         159 MANSFVGTRSYMSPERLQGTHY-SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  237 (322)
T ss_dssp             TC---CCSSCCCCHHHHHCSCC-CTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------
T ss_pred             ccccccCCccccCchHHcCCCC-CcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccc
Confidence            3456799999999999998777 4999999999999999999999976553221100                       


Q ss_pred             -------------------HHhc-ccCCCC-CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          222 -------------------INAA-EFSCPF-WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       222 -------------------i~~~-~~~~p~-~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                         +... ....|. .+|+++.+||.+||+.||.+|||++|+|+||||+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             --------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             cccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                               0000 011121 26899999999999999999999999999999975

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-62  Score=447.79  Aligned_cols=254  Identities=23%  Similarity=0.440  Sum_probs=221.3

Q ss_pred             eccCe-eeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----C
Q 016991            7 RVAKY-EVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----R   81 (379)
Q Consensus         7 ~~~~y-~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----~   81 (379)
                      .-+|| ++.+.||+|+||+||+|++..++..||+|++...... ....+.+.+|+++|+.++|||||++++++.+    .
T Consensus         6 ~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   84 (270)
T d1t4ha_           6 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK   84 (270)
T ss_dssp             TTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSC
T ss_pred             CCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccC
Confidence            34566 6788999999999999999999999999999775543 3345779999999999999999999999864    4


Q ss_pred             CeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeecCCCCcEEEc-cCCCeEEeeeccccC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKG--VYHRDLKPENLLLD-SYGNLKVSDFGLSAL  158 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~g--i~HrDlkp~NIll~-~~~~lkl~DfGl~~~  158 (379)
                      ..+|+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++|  |+||||||+|||++ .++.+||+|||++..
T Consensus        85 ~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~  164 (270)
T d1t4ha_          85 KCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL  164 (270)
T ss_dssp             EEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred             CEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCccee
Confidence            578999999999999999999899999999999999999999999999  99999999999996 578999999999976


Q ss_pred             CCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhccc--CCCCCCCH
Q 016991          159 PQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETD-LPTLYKKINAAEF--SCPFWFST  235 (379)
Q Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~-~~~~~~~i~~~~~--~~p~~~s~  235 (379)
                      ...  ....+.+||+.|+|||++.+ .| +.++|||||||++|+|++|+.||.+.+ ...+.+.+.....  .++...++
T Consensus       165 ~~~--~~~~~~~GT~~Y~aPE~~~~-~~-~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (270)
T d1t4ha_         165 KRA--SFAKAVIGTPEFMAPEMYEE-KY-DESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP  240 (270)
T ss_dssp             CCT--TSBEESCSSCCCCCGGGGGT-CC-CTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCH
T ss_pred             ccC--CccCCcccCccccCHHHhCC-CC-CCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCH
Confidence            443  23457789999999999865 45 599999999999999999999997654 4556666655433  34456899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      ++.+||.+||++||++|||++|+++||||+
T Consensus       241 ~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         241 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            999999999999999999999999999996

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.2e-62  Score=467.12  Aligned_cols=258  Identities=30%  Similarity=0.461  Sum_probs=226.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHH---HHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIK---REISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~---~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      ++++|++++.||+|+||+||+|++..+|+.||||++.+...........+.   +++.+++.++|||||++++++.+.+.
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE
Confidence            578999999999999999999999999999999999865543332223333   44677778889999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      +|+|||||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|...... 
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~-  160 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-  160 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS-
T ss_pred             EEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999865442 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhcccCCCCCCCHhHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEFSCPFWFSTGATSL  240 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~~~p~~~s~~~~~l  240 (379)
                       .....+||+.|+|||++.+...++.++|||||||++|+|++|+.||.+.+.   ..+.+.+.......|..+|+++++|
T Consensus       161 -~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  239 (364)
T d1omwa3         161 -KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSL  239 (364)
T ss_dssp             -CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHH
T ss_pred             -cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHH
Confidence             345678999999999997655556999999999999999999999977543   3445555666677888899999999


Q ss_pred             HHHccCCCCCCCCC-----hHhHhcCccccc
Q 016991          241 IHKILDPNPKTRIR-----IEGIRKHPWFRK  266 (379)
Q Consensus       241 i~~~L~~dP~~R~s-----~~~il~hp~f~~  266 (379)
                      |.+||+.||++|||     ++++++||||+.
T Consensus       240 i~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~  270 (364)
T d1omwa3         240 LEGLLQRDVNRRLGCLGRGAQEVKESPFFRS  270 (364)
T ss_dssp             HHHHTCSSTTTSTTTSSSTHHHHHTSGGGTT
T ss_pred             HHHHcccCHHHhCCCcccCHHHHHcCccccC
Confidence            99999999999999     799999999975

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-61  Score=447.62  Aligned_cols=258  Identities=30%  Similarity=0.565  Sum_probs=231.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc------hHHHHHHHHHHHHHHhCC-CCCcceEEEEEEe
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK------HRMVDQIKREISIMKIVR-HPNIVRLHEVLAS   80 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~------~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~   80 (379)
                      .++|++.+.||+|+||+||+|++..+|+.||||++.+.....      ....+.+.+|+.+|+.++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            479999999999999999999999999999999998754322      223456889999999997 9999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      ++.+|+|||||+||+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  161 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  161 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998665


Q ss_pred             CCcccccccccCCCCCchhhhcc-----CCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSN-----RGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----  231 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----  231 (379)
                      .. ......+||+.|+|||++.+     ...++.++||||+||++|+|++|+.||.+.+.....+.+....+..|.    
T Consensus       162 ~~-~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  240 (277)
T d1phka_         162 PG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD  240 (277)
T ss_dssp             TT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGG
T ss_pred             CC-CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccc
Confidence            43 23456789999999999863     233468999999999999999999999999988888888877665433    


Q ss_pred             CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          232 WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       232 ~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                      .+|+++++||.+||++||++|||++|+++||||+.
T Consensus       241 ~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         241 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             GSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            58999999999999999999999999999999975

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-61  Score=457.16  Aligned_cols=256  Identities=27%  Similarity=0.506  Sum_probs=231.7

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~   85 (379)
                      ..+++|++++.||+|+||+||+|.++.+|+.||||++++...    ....+.+|+.+|+.++|||||++++++.+.+.+|
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~----~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~   77 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILNIARHRNILHLHESFESMEELV   77 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH----HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc----cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence            357899999999999999999999999999999999976432    2246889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC--CCeEEeeeccccCCCCC
Q 016991           86 IILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY--GNLKVSDFGLSALPQQG  162 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~--~~lkl~DfGl~~~~~~~  162 (379)
                      +|||||+||+|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.+  +.+||+|||++......
T Consensus        78 lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            9999999999999998665 79999999999999999999999999999999999999854  48999999999765443


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC----CCCHhHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF----WFSTGAT  238 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~  238 (379)
                       ....+.+||+.|+|||++.+..| +.++|||||||++|+|++|..||.+.+....+..|....+.+|.    .+|+++.
T Consensus       158 -~~~~~~~~t~~y~ape~~~~~~~-~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  235 (321)
T d1tkia_         158 -DNFRLLFTAPEYYAPEVHQHDVV-STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM  235 (321)
T ss_dssp             -CEEEEEESCGGGSCHHHHTTCEE-CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred             -CcccccccccccccchhccCCCC-CchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence             34566789999999999987766 48999999999999999999999999999999999888877664    5899999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      +||++||+.||.+|||++|+++||||+..
T Consensus       236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         236 DFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999999999999754

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-61  Score=451.59  Aligned_cols=258  Identities=25%  Similarity=0.312  Sum_probs=219.7

Q ss_pred             eeeeecccCCeEEEEEEECCCCcEEEEEEeecccccc--hHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 016991           13 VGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILK--HRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEF   90 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~   90 (379)
                      .++.||+|+||+||+|+++.+|+.||||+++......  ....+.+.+|+.+|+.++|||||++++++..++.+|+||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            4688999999999999999999999999997654322  12235688999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcccccccc
Q 016991           91 VTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLHTTC  170 (379)
Q Consensus        91 ~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~~~~  170 (379)
                      +.|+++.........+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...........+.+
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~  161 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV  161 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSC
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccccccee
Confidence            99988877776677899999999999999999999999999999999999999999999999999987666555566789


Q ss_pred             cCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccC----------------------
Q 016991          171 GTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFS----------------------  228 (379)
Q Consensus       171 gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~----------------------  228 (379)
                      ||+.|+|||++.....++.++||||+||++|+|++|.+||.+.+.......|......                      
T Consensus       162 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (299)
T d1ua2a_         162 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP  241 (299)
T ss_dssp             CCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCC
T ss_pred             cChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCC
Confidence            9999999999987666679999999999999999999999988877766665432100                      


Q ss_pred             ------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          229 ------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       229 ------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                            ....+|+++.+||++||+.||++|||++|+|+||||+....|
T Consensus       242 ~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p  289 (299)
T d1ua2a_         242 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  289 (299)
T ss_dssp             CCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             CCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCCC
Confidence                  012468899999999999999999999999999999865443

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-61  Score=445.13  Aligned_cols=252  Identities=32%  Similarity=0.535  Sum_probs=223.7

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchH---HHHHHHHHHHHHHhCC--CCCcceEEEEEEeCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHR---MVDQIKREISIMKIVR--HPNIVRLHEVLASRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~---~~~~~~~Ei~~l~~l~--hp~Iv~l~~~~~~~~   82 (379)
                      -++|++++.||+|+||+||+|++..+|+.||||++.+.......   ...++.+|+.+|+.++  |||||++++++.+.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            47899999999999999999999999999999999875433211   1234678999999987  899999999999999


Q ss_pred             eEEEEEeccCC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccC-CCeEEeeeccccCCC
Q 016991           83 KVYIILEFVTG-GELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSY-GNLKVSDFGLSALPQ  160 (379)
Q Consensus        83 ~~~lv~E~~~g-g~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~-~~lkl~DfGl~~~~~  160 (379)
                      ..|+||||+.+ +++.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|....
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~  162 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK  162 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             eEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceecc
Confidence            99999999976 6888889888999999999999999999999999999999999999999854 799999999997654


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCCCCCHhHHHH
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPFWFSTGATSL  240 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~l  240 (379)
                      .  ....+.+||+.|+|||++.+..+++.++|||||||++|+|++|+.||.+.      ..+......+|..+|+++.+|
T Consensus       163 ~--~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~~~~s~~~~~l  234 (273)
T d1xwsa_         163 D--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQRVSSECQHL  234 (273)
T ss_dssp             S--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCSSCCCHHHHHH
T ss_pred             c--ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCCCCCCHHHHHH
Confidence            3  33456789999999999988888778899999999999999999999753      245667778889999999999


Q ss_pred             HHHccCCCCCCCCChHhHhcCcccccc
Q 016991          241 IHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                      |.+||+.||++|||++|+++||||+..
T Consensus       235 i~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         235 IRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999864

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-60  Score=442.36  Aligned_cols=261  Identities=32%  Similarity=0.477  Sum_probs=221.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||+||+|.+..+|+.||||++..... .....+++.+|+.+|+.++|||||++++++.+.+.+|+|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEE
Confidence            4789999999999999999999999999999999976542 233456788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHH-h-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccc
Q 016991           88 LEFVTGGELFDKIV-H-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVEL  165 (379)
Q Consensus        88 ~E~~~gg~L~~~l~-~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~  165 (379)
                      |||+.++ +.+.+. . .+.+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|.........
T Consensus        80 ~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          80 FEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             EECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             EeecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCccc
Confidence            9999665 444443 2 457999999999999999999999999999999999999999999999999999776655556


Q ss_pred             ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc------------------c
Q 016991          166 LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE------------------F  227 (379)
Q Consensus       166 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~------------------~  227 (379)
                      ....+||+.|+|||++....+.+.++||||+||++|+|++|+.||.+.+.......+....                  .
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  238 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP  238 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcccccccccccc
Confidence            6677899999999999888888899999999999999999999999887665444432110                  0


Q ss_pred             CCC-----------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          228 SCP-----------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       228 ~~p-----------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                      ..+           ..+|+++.+||++||++||++|||++|+++||||+....|
T Consensus       239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             ccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            011           1367899999999999999999999999999999876554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-60  Score=449.90  Aligned_cols=255  Identities=33%  Similarity=0.582  Sum_probs=217.0

Q ss_pred             cceeccCeeeee-eecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHH-hCCCCCcceEEEEEEe-
Q 016991            4 QTRRVAKYEVGR-TIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMK-IVRHPNIVRLHEVLAS-   80 (379)
Q Consensus         4 ~~~~~~~y~~~~-~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~-~l~hp~Iv~l~~~~~~-   80 (379)
                      +...+++|++.+ .||+|+||+||+|++..+|+.||||++++.        ..+.+|+.++. ..+|||||++++++.+ 
T Consensus         6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~   77 (335)
T d2ozaa1           6 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENL   77 (335)
T ss_dssp             CSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             CCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeec
Confidence            345688999875 599999999999999999999999998642        45678999865 5589999999999875 


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc---CCCeEEee
Q 016991           81 ---RTKVYIILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS---YGNLKVSD  152 (379)
Q Consensus        81 ---~~~~~lv~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~---~~~lkl~D  152 (379)
                         ...+|+|||||+||+|.+++...  .++++.+++.++.||+.||+|||++||+||||||+|||++.   ++.+||+|
T Consensus        78 ~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~D  157 (335)
T d2ozaa1          78 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  157 (335)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECC
T ss_pred             ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccccccccccccc
Confidence               46799999999999999999874  36999999999999999999999999999999999999985   45799999


Q ss_pred             eccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHHhcccC
Q 016991          153 FGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPT----LYKKINAAEFS  228 (379)
Q Consensus       153 fGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~----~~~~i~~~~~~  228 (379)
                      ||++...... ....+.+||+.|+|||++.+..|+ .++|||||||++|+|++|++||.+.+...    +...+....+.
T Consensus       158 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~y~-~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~  235 (335)
T d2ozaa1         158 FGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYD-KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE  235 (335)
T ss_dssp             CTTCEECCCC-CCCCCCSCCCSSCCCCCCCGGGGS-HHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSS
T ss_pred             cceeeeccCC-CccccccCCcccCCcHHHcCCCCC-HHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCC
Confidence            9999765543 344677899999999999887774 89999999999999999999997765433    33344455555


Q ss_pred             CCC----CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          229 CPF----WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       229 ~p~----~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                      +|.    .+|+++.+||++||+.||++|||++|+++||||+...
T Consensus       236 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  279 (335)
T d2ozaa1         236 FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  279 (335)
T ss_dssp             CCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTT
T ss_pred             CCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCC
Confidence            553    4799999999999999999999999999999997654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.9e-59  Score=434.94  Aligned_cols=257  Identities=30%  Similarity=0.440  Sum_probs=219.5

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++.+.||+|+||+||+|+++ +|+.||||++..... .....+++.+|+.+|+.++||||+++++++.+.+..|++
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~   78 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLV   78 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEE
Confidence            479999999999999999999996 789999999976543 233457889999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      +||+.++.+..+....+.+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||.+...........
T Consensus        79 ~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  158 (286)
T d1ob3a_          79 FEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (286)
T ss_dssp             EECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             EEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence            99998887777777788999999999999999999999999999999999999999999999999999876554444455


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc---------------------
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE---------------------  226 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~---------------------  226 (379)
                      ..+|++.|+|||++.+..+.+.++||||+||++|+|++|++||.+.+.......+....                     
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF  238 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence            66799999999999887777899999999999999999999999887666555442210                     


Q ss_pred             --------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          227 --------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       227 --------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                              ...+..+|+++.|||++||++||++|||++|+++||||+.
T Consensus       239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                    0123346899999999999999999999999999999973

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.4e-58  Score=427.16  Aligned_cols=260  Identities=24%  Similarity=0.391  Sum_probs=219.5

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT--   82 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~--   82 (379)
                      +..-++|++.+.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+|+.++||||+++++++...+  
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~   82 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA   82 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSS
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCC
Confidence            456678999999999999999999999999999999998876666666788999999999999999999999987643  


Q ss_pred             --eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           83 --KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                        ..|+||||++|++|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++..+|+|||.+....
T Consensus        83 ~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_          83 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  162 (277)
T ss_dssp             SEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred             CceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhc
Confidence              489999999999999999999999999999999999999999999999999999999999999999999999876543


Q ss_pred             CC---cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC----CCCC
Q 016991          161 QG---VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC----PFWF  233 (379)
Q Consensus       161 ~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~  233 (379)
                      ..   .....+.+||+.|+|||++.+..++ .++||||+||++|+|++|++||.+.+.......+.......    +..+
T Consensus       163 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~-~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (277)
T d1o6ya_         163 DSGNSVTQTAAVIGTAQYLSPEQARGDSVD-ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL  241 (277)
T ss_dssp             ----------------TTCCHHHHTTCCCC-HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSC
T ss_pred             cccccccccccccCcccccCHHHHcCCCCC-cceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCC
Confidence            32   2234567899999999999877764 89999999999999999999999988877766665554433    3468


Q ss_pred             CHhHHHHHHHccCCCCCCCCChHhHhcCcccc
Q 016991          234 STGATSLIHKILDPNPKTRIRIEGIRKHPWFR  265 (379)
Q Consensus       234 s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~  265 (379)
                      |+++.+||.+||++||.+||+..+.+.|+|.+
T Consensus       242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r  273 (277)
T d1o6ya_         242 SADLDAVVLKALAKNPENRYQTAAEMRADLVR  273 (277)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHH
Confidence            99999999999999999999544445677764

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-58  Score=430.88  Aligned_cols=264  Identities=25%  Similarity=0.326  Sum_probs=218.8

Q ss_pred             cceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe---
Q 016991            4 QTRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS---   80 (379)
Q Consensus         4 ~~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~---   80 (379)
                      ....+++|++++.||+|+||+||+|++..+|+.||||++.+.... ....+++.+|+.+|+.++||||+++++++..   
T Consensus         5 ~~~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~   83 (318)
T d3blha1           5 FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKAS   83 (318)
T ss_dssp             TSCBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---
T ss_pred             CCCccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHhcCCCccceEeeeecccc
Confidence            345689999999999999999999999999999999999765433 2344678899999999999999999998854   


Q ss_pred             -----CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           81 -----RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        81 -----~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                           .+.+|+||||+.++.+.........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        84 ~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          84 PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             -------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             cccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecce
Confidence                 456899999998877766666667899999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCC----CcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCCCC
Q 016991          156 SALPQQ----GVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSCPF  231 (379)
Q Consensus       156 ~~~~~~----~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~  231 (379)
                      +.....    ......+.+||+.|+|||++.+...++.++||||+||++|+|++|+.||.+.+.......+.......+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~  243 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  243 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            965443    1223455789999999999987765679999999999999999999999887766655554332211111


Q ss_pred             --------------------------------CCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          232 --------------------------------WFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       232 --------------------------------~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                                      ..++++.|||.+||++||++|||++|+++||||+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p  312 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDP  312 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSS
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccCC
Confidence                                            1377889999999999999999999999999998643

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-57  Score=421.66  Aligned_cols=259  Identities=32%  Similarity=0.459  Sum_probs=226.9

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      +++|++++.||+|+||+||+|++..+|+.||||+++.... .....+++.+|+.+|+.++||||+++++++.+....+++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv   79 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEE
Confidence            4799999999999999999999999999999999976543 334568899999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCccccc
Q 016991           88 LEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVELLH  167 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~~~~  167 (379)
                      +|++.|++|..++...+.+++..++.++.|++.||+|||++||+||||||+|||++.++++||+|||.+...........
T Consensus        80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~  159 (292)
T d1unla_          80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS  159 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC
T ss_pred             eeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccce
Confidence            99999999999888888999999999999999999999999999999999999999999999999999987666555555


Q ss_pred             ccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHhcc--------------------
Q 016991          168 TTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPF-GETDLPTLYKKINAAE--------------------  226 (379)
Q Consensus       168 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf-~~~~~~~~~~~i~~~~--------------------  226 (379)
                      ...+++.|+|||++....+.+.++||||+||++|+|++|..|| .+.+.......+....                    
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T d1unla_         160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence            6678899999999988777789999999999999999999885 4555555555442211                    


Q ss_pred             ---------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 ---------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 ---------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                               ...+..+|+++.+||++||++||++|||++|+|+||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence                     11223468899999999999999999999999999999754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-57  Score=426.82  Aligned_cols=258  Identities=29%  Similarity=0.373  Sum_probs=213.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCC-CcEEEEEEeecccccchHHHHHHHHHHHHHHhC---CCCCcceEEEEEEe--
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRET-GESVAMKVLAKSTILKHRMVDQIKREISIMKIV---RHPNIVRLHEVLAS--   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~-~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l---~hp~Iv~l~~~~~~--   80 (379)
                      ..++|++++.||+|+||+||+|++..+ ++.||||++........ ....+.+|+.+|+.+   +||||+++++++..  
T Consensus         5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch-HHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence            457999999999999999999999766 66799999976543221 223455777777655   79999999999853  


Q ss_pred             ---CCeEEEEEeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           81 ---RTKVYIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        81 ---~~~~~lv~E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                         ...+|++|||+.++.+..... ....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~  163 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA  163 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhh
Confidence               357999999998877654433 3457999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc----------
Q 016991          157 ALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE----------  226 (379)
Q Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~----------  226 (379)
                      ...... ....+.+||+.|+|||++.+..|+ .++||||+||++|+|++|++||.+.+.......+....          
T Consensus       164 ~~~~~~-~~~~~~~gT~~Y~APE~~~~~~y~-~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         164 RIYSFQ-MALTSVVVTLWYRAPEVLLQSSYA-TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             CCCCGG-GGGCCCCCCCTTCCHHHHTTCCCC-THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             hhhccc-ccCCCcccChhhcCcchhcCCCCC-hhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence            765443 345678899999999999887774 89999999999999999999999888776665553210          


Q ss_pred             -----------------cCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCcccccc
Q 016991          227 -----------------FSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKN  267 (379)
Q Consensus       227 -----------------~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~  267 (379)
                                       ..++..+|+++.+||++||++||++|||++|+++||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence                             01234578999999999999999999999999999999753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-57  Score=430.30  Aligned_cols=256  Identities=27%  Similarity=0.395  Sum_probs=214.4

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----   82 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----   82 (379)
                      .-++|++++.||+|+||+||+|.+..+|+.||||++.+.. ......+.+.+|+.+|+.++|||||++++++...+    
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh-cChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccc
Confidence            4579999999999999999999999999999999997643 34455678999999999999999999999997654    


Q ss_pred             --eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           83 --KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        83 --~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                        .+|+||||+ |.+|...+ +.+++++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||+|....
T Consensus        95 ~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          95 FTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             CCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccC
Confidence              579999999 66666555 45789999999999999999999999999999999999999999999999999997654


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------  227 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------  227 (379)
                      .   .....+||+.|+|||++.+..+.+.++||||+||++|+|++|++||.+.+.......+.....             
T Consensus       173 ~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (346)
T d1cm8a_         173 S---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD  249 (346)
T ss_dssp             S---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             C---ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcch
Confidence            3   335678999999999998877778999999999999999999999988776554433322110             


Q ss_pred             ------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccC
Q 016991          228 ------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNY  268 (379)
Q Consensus       228 ------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~  268 (379)
                                        ..+..+|+++.+||++||+.||++|||++|+|+||||+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         250 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence                              12345789999999999999999999999999999998643

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-57  Score=421.27  Aligned_cols=248  Identities=26%  Similarity=0.363  Sum_probs=217.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYII   87 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv   87 (379)
                      .++|++++.||+|+||+||+|++..+|+.||||++..+..    ..+++.+|+.+|+.++|||||++++++.+.+.+|+|
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII   91 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc----hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEE
Confidence            3578889999999999999999999999999999876432    236789999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc-
Q 016991           88 LEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE-  164 (379)
Q Consensus        88 ~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~-  164 (379)
                      ||||++|+|.+++...  ..+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+++....... 
T Consensus        92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~  171 (287)
T d1opja_          92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  171 (287)
T ss_dssp             EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE
T ss_pred             eecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCce
Confidence            9999999999999764  5789999999999999999999999999999999999999999999999999987654322 


Q ss_pred             cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCC-CCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHH
Q 016991          165 LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGY-LPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIH  242 (379)
Q Consensus       165 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~-~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~  242 (379)
                      ......|++.|+|||++.+..|+ .++||||+||++|+|++|. +||.+.+...+.+.+... ....|..+|+++.+||.
T Consensus       172 ~~~~~~g~~~y~aPE~~~~~~~~-~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~  250 (287)
T d1opja_         172 AHAGAKFPIKWTAPESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMR  250 (287)
T ss_dssp             EETTEEECGGGCCHHHHHHCCCS-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred             eeccccccccccChHHHcCCCCC-chhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHH
Confidence            23345689999999999887774 9999999999999999955 556666666666666544 45677889999999999


Q ss_pred             HccCCCCCCCCChHhHhc
Q 016991          243 KILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       243 ~~L~~dP~~R~s~~~il~  260 (379)
                      +||+.||++|||++++++
T Consensus       251 ~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         251 ACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHTCSSGGGSCCHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHH
Confidence            999999999999999976

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-57  Score=413.50  Aligned_cols=247  Identities=23%  Similarity=0.378  Sum_probs=208.7

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||+|+||+||+|++. +++.||||++++....    .+.+.+|+.+++.++|||||++++++...+..|+||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~----~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~   79 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF   79 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCc----HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEE
Confidence            58999999999999999999986 5778999999764432    256889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-ccc
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-ELL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~~~  166 (379)
                      ||+++|+|.+++... ..+++..+..++.||+.||+|||+++|+||||||+|||++.++++||+|||+++...... ...
T Consensus        80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~  159 (263)
T d1sm2a_          80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  159 (263)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-------------
T ss_pred             EecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceee
Confidence            999999999988654 568899999999999999999999999999999999999999999999999997654432 223


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~  244 (379)
                      ....||+.|+|||++.+..|+ .++||||+||++|||++ |.+||...+...+.+.+..+ ....|..+++++.+||.+|
T Consensus       160 ~~~~gt~~y~aPE~l~~~~~~-~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  238 (263)
T d1sm2a_         160 TGTKFPVKWASPEVFSFSRYS-SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHC  238 (263)
T ss_dssp             -----CTTSCCHHHHTTCCCC-HHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHH
T ss_pred             cceecCcccCChHHhcCCCCC-chhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHH
Confidence            456799999999999887764 89999999999999998 68888888877777777665 4556778899999999999


Q ss_pred             cCCCCCCCCChHhHhcC
Q 016991          245 LDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       245 L~~dP~~R~s~~~il~h  261 (379)
                      |+.||++|||+++|++|
T Consensus       239 l~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         239 WKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCCHhHCcCHHHHHHH
Confidence            99999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-57  Score=430.26  Aligned_cols=257  Identities=29%  Similarity=0.362  Sum_probs=213.4

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS----   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~----   80 (379)
                      ....-+|+.++.||+|+||+||+|++..+|+.||||++.+...       ...+|+.+|+.++||||+++++++..    
T Consensus        16 ~~~~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~   88 (350)
T d1q5ka_          16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEK   88 (350)
T ss_dssp             CCEEEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCCCTTBCCEEEEEEEC--C
T ss_pred             CcccCCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcCCCCCCcEEEEEEecCcc
Confidence            3444579999999999999999999999999999999976542       22479999999999999999999853    


Q ss_pred             --CCeEEEEEeccCCCChHH---HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeec
Q 016991           81 --RTKVYIILEFVTGGELFD---KIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFG  154 (379)
Q Consensus        81 --~~~~~lv~E~~~gg~L~~---~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfG  154 (379)
                        ..++|+|||||+++.+..   .......+++.+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus        89 ~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG  168 (350)
T d1q5ka_          89 KDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFG  168 (350)
T ss_dssp             CSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCT
T ss_pred             CCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEeccc
Confidence              345899999997664322   223456899999999999999999999999999999999999999775 89999999


Q ss_pred             cccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---------
Q 016991          155 LSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAA---------  225 (379)
Q Consensus       155 l~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~---------  225 (379)
                      ++...... ....+.+||+.|+|||++.+...++.++||||+||++|+|++|+.||...+.......+...         
T Consensus       169 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~  247 (350)
T d1q5ka_         169 SAKQLVRG-EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI  247 (350)
T ss_dssp             TCEECCTT-SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             chhhccCC-cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhh
Confidence            98765443 33456789999999999887666679999999999999999999999888766555444210         


Q ss_pred             --------ccC------------CCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          226 --------EFS------------CPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       226 --------~~~------------~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                              ...            ....+|+++.+||.+||+.||++|||+.|+++||||+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  311 (350)
T d1q5ka_         248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD  311 (350)
T ss_dssp             HHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred             hhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccC
Confidence                    011            12347899999999999999999999999999999986543

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-57  Score=418.15  Aligned_cols=247  Identities=20%  Similarity=0.341  Sum_probs=211.4

Q ss_pred             eeecccCCeEEEEEEEC--CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 016991           15 RTIGEGTFAKVRFAQNR--ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIILEFVT   92 (379)
Q Consensus        15 ~~LG~G~~g~V~~a~~~--~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~E~~~   92 (379)
                      +.||+|+||+||+|.+.  .+++.||||++..... .....+.+.+|+.+|++++|||||++++++.+ +..|+|||||+
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~   90 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE   90 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCC
Confidence            46999999999999864  4567899999975443 33455789999999999999999999999865 45789999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCcc---ccccc
Q 016991           93 GGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGVE---LLHTT  169 (379)
Q Consensus        93 gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~~---~~~~~  169 (379)
                      +|+|.+++.....+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......   .....
T Consensus        91 ~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~  170 (277)
T d1xbba_          91 LGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG  170 (277)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----
T ss_pred             CCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccccccccc
Confidence            999999999989999999999999999999999999999999999999999999999999999976543221   22345


Q ss_pred             ccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHccCC
Q 016991          170 CGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKILDP  247 (379)
Q Consensus       170 ~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~L~~  247 (379)
                      .||+.|+|||++.+..+ +.++||||+||++|||++ |++||.+.+..++...+..+ .+..|..+|+++.+||.+||+.
T Consensus       171 ~gt~~y~APE~l~~~~~-~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~  249 (277)
T d1xbba_         171 KWPVKWYAPECINYYKF-SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTY  249 (277)
T ss_dssp             CCCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred             CCCceecCchhhcCCCC-CchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHHcCC
Confidence            78999999999987766 489999999999999997 99999998888888777664 4677888999999999999999


Q ss_pred             CCCCCCChHhH---hcCccc
Q 016991          248 NPKTRIRIEGI---RKHPWF  264 (379)
Q Consensus       248 dP~~R~s~~~i---l~hp~f  264 (379)
                      ||++|||+++|   |+|+|+
T Consensus       250 dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         250 DVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             STTTSCCHHHHHHHHHHHHH
T ss_pred             CHhHCcCHHHHHHHhhCHHh
Confidence            99999999998   466665

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-57  Score=424.98  Aligned_cols=261  Identities=33%  Similarity=0.588  Sum_probs=226.6

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEE---CCCCcEEEEEEeeccccc-chHHHHHHHHHHHHHHhCCC-CCcceEEEEEEe
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQN---RETGESVAMKVLAKSTIL-KHRMVDQIKREISIMKIVRH-PNIVRLHEVLAS   80 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~---~~~~~~vaiK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~   80 (379)
                      ..+++|++++.||+|+||+||+|++   ..+|+.||||++++.... .....+.+.+|+.+|++++| |||+++++++.+
T Consensus        21 ~~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~  100 (322)
T d1vzoa_          21 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT  100 (322)
T ss_dssp             CCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE
T ss_pred             cchhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc
Confidence            4578999999999999999999987   457899999999765432 22234668899999999977 899999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      ...+|++|||+.||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++....
T Consensus       101 ~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         101 ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999997654


Q ss_pred             C-CcccccccccCCCCCchhhhccCC-CCCCchhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcccCCCCCCC
Q 016991          161 Q-GVELLHTTCGTPNYVAPEVLSNRG-YDGSAADVWSCGVILFVLMAGYLPFGETDLP----TLYKKINAAEFSCPFWFS  234 (379)
Q Consensus       161 ~-~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~----~~~~~i~~~~~~~p~~~s  234 (379)
                      . ......+.+|++.|+|||.+.+.. +.+.++|||||||+||+|++|..||.+.+..    .+.+........+|..+|
T Consensus       181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s  260 (322)
T d1vzoa_         181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMS  260 (322)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSC
T ss_pred             ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCC
Confidence            3 333456778999999999997654 4468999999999999999999999776543    334444555677788899


Q ss_pred             HhHHHHHHHccCCCCCCCC-----ChHhHhcCccccc
Q 016991          235 TGATSLIHKILDPNPKTRI-----RIEGIRKHPWFRK  266 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~-----s~~~il~hp~f~~  266 (379)
                      +++.+||++||++||.+||     |++|+++||||+.
T Consensus       261 ~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~  297 (322)
T d1vzoa_         261 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  297 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcC
Confidence            9999999999999999999     5899999999974

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-56  Score=418.09  Aligned_cols=253  Identities=25%  Similarity=0.360  Sum_probs=209.4

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCc---EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGE---SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~---~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|++.+.||+|+||+||+|.++.+|+   .||||.+....  .....+.+.+|+.+|+.++|||||++++++...+
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~  100 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKST  100 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence            346789999999999999999999987765   58888876543  3334577999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQ  161 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~  161 (379)
                      .+|+|||||+||+|.+++... +.+++.++..++.||+.||+|||++||+||||||+||||+.++++||+|||+++....
T Consensus       101 ~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         101 PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             SCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             EEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence            999999999999999988764 5799999999999999999999999999999999999999999999999999986544


Q ss_pred             Cccc-----ccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCC
Q 016991          162 GVEL-----LHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFS  234 (379)
Q Consensus       162 ~~~~-----~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s  234 (379)
                      ....     .....||+.|+|||++.+..+ +.++|||||||++|||++ |+.||.+.+...+...+... ..+.|..++
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  259 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKF-TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP  259 (299)
T ss_dssp             ---------------CGGGSCHHHHHSCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             CCCcceeeecccccCCccccCHHHHhcCCC-CcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccch
Confidence            2111     122457899999999987766 489999999999999998 89999998888887777654 356777899


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      +++.+||.+||+.||++|||+.|++++
T Consensus       260 ~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         260 SALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999999998864

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-56  Score=425.99  Aligned_cols=258  Identities=28%  Similarity=0.449  Sum_probs=214.0

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----e
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT-----K   83 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~-----~   83 (379)
                      ++|++++.||+|+||+||+|++..+|+.||||++++..  .....+.+.+|+.+|+.++||||+++++++....     .
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            58999999999999999999999999999999997643  3445678899999999999999999999997543     3


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC-
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG-  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~-  162 (379)
                      +|++ +|+.||+|.+++.. +++++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++...... 
T Consensus        86 ~~l~-~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~  163 (345)
T d1pmea_          86 VYLV-THLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  163 (345)
T ss_dssp             EEEE-EECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEE-EeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence            4554 55669999999875 57999999999999999999999999999999999999999999999999998755432 


Q ss_pred             --cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcc--------------
Q 016991          163 --VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAE--------------  226 (379)
Q Consensus       163 --~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~--------------  226 (379)
                        .......+||+.|+|||++.....++.++||||+||++|+|++|+.||.+.+............              
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (345)
T d1pmea_         164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL  243 (345)
T ss_dssp             CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhh
Confidence              2234567899999999999776666799999999999999999999998877544433321100              


Q ss_pred             ----------c-------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCCC
Q 016991          227 ----------F-------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYNP  270 (379)
Q Consensus       227 ----------~-------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~~  270 (379)
                                .       .....+|+++.+||.+||+.||.+|||++|+|+||||+....+
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~  304 (345)
T d1pmea_         244 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP  304 (345)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             hhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCC
Confidence                      0       0123478899999999999999999999999999999866544

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-57  Score=426.34  Aligned_cols=251  Identities=22%  Similarity=0.361  Sum_probs=213.1

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCc-----EEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGE-----SVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~-----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      .++|++++.||+|+||+||+|++..+++     .||+|.+.....  ......+.+|+.+|+.+ +|||||++++++.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~  113 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLS  113 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC--HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeC
Confidence            3689999999999999999999876554     699998865432  22346788999999988 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCC
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ-----------------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPE  138 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~-----------------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~  138 (379)
                      +.+|+|||||+||+|.+++...                       +.+++..++.++.||+.||+|||++||+||||||+
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~  193 (325)
T d1rjba_         114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR  193 (325)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred             CeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchh
Confidence            9999999999999999999754                       24889999999999999999999999999999999


Q ss_pred             cEEEccCCCeEEeeeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCCh
Q 016991          139 NLLLDSYGNLKVSDFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDL  215 (379)
Q Consensus       139 NIll~~~~~lkl~DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~  215 (379)
                      |||++.++++||+|||+|+.......  ...+.+||+.|+|||++.+..| +.++||||+||++|||++ |.+||.+.+.
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY-TIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCC-CcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999999976544322  2345678999999999988776 489999999999999997 8999988766


Q ss_pred             HHHHHHHHhc--ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          216 PTLYKKINAA--EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       216 ~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ......+...  .+..|..+|+++.+||.+||+.||++|||++||++|
T Consensus       273 ~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         273 DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            5544444333  355678899999999999999999999999999975

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-56  Score=415.89  Aligned_cols=254  Identities=24%  Similarity=0.357  Sum_probs=218.2

Q ss_pred             ccCeeeeee-ecccCCeEEEEEEECCC--CcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRT-IGEGTFAKVRFAQNRET--GESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~-LG~G~~g~V~~a~~~~~--~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      -++|.+.+. ||+|+||+||+|.++.+  +..||||+++...  .....+.+.+|+.+|+.++|||||++++++.+ +.+
T Consensus         7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~   83 (285)
T d1u59a_           7 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EAL   83 (285)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSE
T ss_pred             ccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeE
Confidence            356888885 99999999999987643  4589999997543  33455789999999999999999999999875 468


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+|||||+||+|.+++.. ++.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus        84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_          84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  163 (285)
T ss_dssp             EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccc
Confidence            999999999999998765 4579999999999999999999999999999999999999999999999999998654422


Q ss_pred             ---ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHH
Q 016991          164 ---ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGAT  238 (379)
Q Consensus       164 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~  238 (379)
                         ......+||+.|+|||++.+..+ +.++||||+||++|||++ |+.||.+.+..++...+..+. ...|..+|+++.
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~  242 (285)
T d1u59a_         164 SYYTARSAGKWPLKWYAPECINFRKF-SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY  242 (285)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred             cccccccccccCccccChHHHhCCCC-CccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHH
Confidence               22235578999999999987766 489999999999999998 999999988888877776653 577889999999


Q ss_pred             HHHHHccCCCCCCCCChHhH---hcCcccc
Q 016991          239 SLIHKILDPNPKTRIRIEGI---RKHPWFR  265 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~i---l~hp~f~  265 (379)
                      +||.+||+.||++|||+.+|   |+|+|+.
T Consensus       243 ~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         243 ALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            99999999999999999887   5677764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-57  Score=415.10  Aligned_cols=250  Identities=21%  Similarity=0.341  Sum_probs=207.2

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||+||+|+..   ..||||+++...... ...+.+.+|+.+|+.++|||||++++++.+ +.+|+
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~l   80 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTP-QQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAI   80 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCT-THHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCH-HHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEE
Confidence            4578999999999999999999754   469999997654333 346789999999999999999999998754 56899


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC--c
Q 016991           87 ILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG--V  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~--~  163 (379)
                      |||||+||+|.+++... +++++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||+|......  .
T Consensus        81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence            99999999999999754 57999999999999999999999999999999999999999999999999999765442  2


Q ss_pred             ccccccccCCCCCchhhhccCC--CCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhccc-----CCCCCCCH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRG--YDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKINAAEF-----SCPFWFST  235 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~--~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~-----~~p~~~s~  235 (379)
                      ....+.+||+.|+|||++.+..  .++.++||||+||++|||++|+.||.+.+.. .....+.....     ..+..+|+
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  240 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK  240 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCH
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchH
Confidence            3345678999999999996432  2358999999999999999999999886654 34444443321     24556899


Q ss_pred             hHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          236 GATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       236 ~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      ++.+||.+||+.||++|||+++|+++
T Consensus       241 ~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         241 AMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-57  Score=414.55  Aligned_cols=252  Identities=23%  Similarity=0.388  Sum_probs=218.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||+||+|++. ++..||||+++.....    .+.+.+|+.+|+.++|||||++++++.+ +.+|+
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~----~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~i   84 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS----PDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCC----HHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEE
Confidence            3478999999999999999999986 5788999999764322    3578999999999999999999998755 56799


Q ss_pred             EEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVHQ--GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~~--~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||+++|+|.+++...  .++++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+|+...... 
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcc
Confidence            99999999999877543  369999999999999999999999999999999999999999999999999998765432 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      .......||+.|+|||++.+..+ +.++||||+||++|||++ |.+||...+.....+.+..+ ....|..+++++.+||
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li  243 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTF-TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLM  243 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             ccccccCCcccccChHHHhCCCC-CchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHH
Confidence            23345679999999999987766 489999999999999999 56777777777777777654 4567888999999999


Q ss_pred             HHccCCCCCCCCChHhHhc--Ccccc
Q 016991          242 HKILDPNPKTRIRIEGIRK--HPWFR  265 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~--hp~f~  265 (379)
                      .+||+.||++|||++++++  |+||.
T Consensus       244 ~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         244 RLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            9999999999999999998  78885

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-56  Score=407.45  Aligned_cols=247  Identities=22%  Similarity=0.372  Sum_probs=220.8

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYIIL   88 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~lv~   88 (379)
                      ++|++++.||+|+||+||+|+++ ++..||||++++.....    +.+.+|+.+++.++||||+++++++.+++.+|+||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~----~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~   78 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   78 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCH----HHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCH----HHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEE
Confidence            58999999999999999999985 78899999998754432    56889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-ccc
Q 016991           89 EFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-ELL  166 (379)
Q Consensus        89 E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-~~~  166 (379)
                      ||+++|+|.+++.. ...+++..+.+++.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ...
T Consensus        79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  158 (258)
T d1k2pa_          79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  158 (258)
T ss_dssp             ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC
T ss_pred             EccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceee
Confidence            99999999998654 4679999999999999999999999999999999999999999999999999997654432 223


Q ss_pred             cccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHHHHc
Q 016991          167 HTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLIHKI  244 (379)
Q Consensus       167 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li~~~  244 (379)
                      ...+||+.|+|||++.+..++ .++||||+||++|||++ |+.||.+.+..++...+... ....|...++++.+||.+|
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~-~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c  237 (258)
T d1k2pa_         159 VGSKFPVRWSPPEVLMYSKFS-SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC  237 (258)
T ss_dssp             CCSCCCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred             cccCCCCCcCCcHHhcCCCCC-cceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCcccccHHHHHHHHHH
Confidence            346789999999999887775 89999999999999998 89999999988888888765 4567788999999999999


Q ss_pred             cCCCCCCCCChHhHhcC
Q 016991          245 LDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       245 L~~dP~~R~s~~~il~h  261 (379)
                      |+.||++|||+++|++|
T Consensus       238 l~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         238 WHEKADERPTFKILLSN  254 (258)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCCHhHCcCHHHHHHH
Confidence            99999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-56  Score=423.55  Aligned_cols=257  Identities=25%  Similarity=0.350  Sum_probs=217.0

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR-----T   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~-----~   82 (379)
                      -+||++++.||+|+||+||+|++..+|+.||||++.+... .....+++.+|+.+|+.++|||||++++++...     .
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            4689999999999999999999999999999999976543 334457789999999999999999999998643     3


Q ss_pred             eEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      ..+++++|+.||+|.+++.. +++++.+++.++.||+.||+|||++||+||||||+|||++.+|.+|++|||++..... 
T Consensus        96 ~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~-  173 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-  173 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTG-
T ss_pred             ceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCc-
Confidence            34566777789999998854 6899999999999999999999999999999999999999999999999999875443 


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcccCC-------------
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEFSC-------------  229 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~-------------  229 (379)
                        ...+.+||+.|+|||++.+..+.+.++||||+||++|+|++|.+||.+.+.......+.......             
T Consensus       174 --~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  251 (348)
T d2gfsa1         174 --EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESA  251 (348)
T ss_dssp             --GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHH
T ss_pred             --ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhh
Confidence              34567899999999998888777899999999999999999999999888766655553321111             


Q ss_pred             ------------------CCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          230 ------------------PFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       230 ------------------p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                                        ...+|+++.+||++||+.||.+|||++|+|+||||+....
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~  309 (348)
T d2gfsa1         252 RNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  309 (348)
T ss_dssp             HHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCC
Confidence                              1247899999999999999999999999999999987544

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.7e-55  Score=414.57  Aligned_cols=250  Identities=26%  Similarity=0.456  Sum_probs=210.1

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEe--CCe
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLAS--RTK   83 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~--~~~   83 (379)
                      ..++|++++.||+|+||+||+|++..+|+.||||++.+..      .+++.+|+.+|+.++ ||||+++++++..  ...
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~  106 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRT  106 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCc
Confidence            4578999999999999999999999999999999986532      356889999999996 9999999999974  457


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC-CeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG-NLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~-~lkl~DfGl~~~~~~~  162 (379)
                      +|+|||||++++|....   +.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|......
T Consensus       107 ~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             EEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             eeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            99999999999987653   5799999999999999999999999999999999999998765 5999999999765543


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH-------------hccc-
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-TLYKKIN-------------AAEF-  227 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-~~~~~i~-------------~~~~-  227 (379)
                       ......+||+.|+|||++.+...++.++||||+||++|+|++|..||...... .....+.             .... 
T Consensus       184 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~  262 (328)
T d3bqca1         184 -QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE  262 (328)
T ss_dssp             -CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred             -CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccc
Confidence             33467789999999999987766679999999999999999999999765432 1111110             0000 


Q ss_pred             -----------------------CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccc
Q 016991          228 -----------------------SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRK  266 (379)
Q Consensus       228 -----------------------~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~  266 (379)
                                             ..+..+|+++.+||++||+.||++|||++|+|+||||+.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~  324 (328)
T d3bqca1         263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT  324 (328)
T ss_dssp             CCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTT
T ss_pred             cCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence                                   011236899999999999999999999999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-55  Score=406.47  Aligned_cols=250  Identities=29%  Similarity=0.395  Sum_probs=207.4

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++++.||+|+||+||+|++..++   ..||||.+....  .....+.+.+|+.+|+.++|||||++++++. .+.+
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~   82 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   82 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeE
Confidence            468999999999999999999987554   468888875432  3445577999999999999999999999986 4678


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVH-QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~-~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      |+||||+++|+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        83 ~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            999999999999998765 4579999999999999999999999999999999999999999999999999998654422


Q ss_pred             -ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHHHH
Q 016991          164 -ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGATSL  240 (379)
Q Consensus       164 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~~l  240 (379)
                       ......+||+.|+|||++.+..| +.++||||+||++|||++ |.+||.+.+..++...+..+. .+.|..+|+++.+|
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~-~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l  241 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRF-TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSL  241 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCC-SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred             ceeccceecCcccchhhHhccCCC-CCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence             23345568999999999987776 489999999999999998 899999998888888877654 56788899999999


Q ss_pred             HHHccCCCCCCCCChHhHhcC
Q 016991          241 IHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~h  261 (379)
                      |.+||+.||++|||++||++|
T Consensus       242 i~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         242 MTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999875

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-55  Score=417.96  Aligned_cols=257  Identities=28%  Similarity=0.442  Sum_probs=205.8

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe------
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS------   80 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~------   80 (379)
                      .+.+|++++.||+|+||+||+|++..+|+.||||++.+... ......++.+|+.+|+.++||||+++++++..      
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~   93 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE   93 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccccccc
Confidence            45799999999999999999999999999999999977543 34456789999999999999999999999963      


Q ss_pred             CCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~  160 (379)
                      ...+|+|||||.|+ +.+.+  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+|++|||++....
T Consensus        94 ~~~~~iv~Ey~~~~-l~~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          94 FQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             CCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             CceeEEEEeccchH-HHHhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccc
Confidence            47899999999665 44444  3679999999999999999999999999999999999999999999999999987655


Q ss_pred             CCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhccc-------------
Q 016991          161 QGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYKKINAAEF-------------  227 (379)
Q Consensus       161 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~-------------  227 (379)
                      .. ......+||+.|+|||++.+..+ +.++||||+||++|+|++|++||.+.+......++.....             
T Consensus       171 ~~-~~~~~~~~t~~y~aPE~l~~~~~-~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  248 (355)
T d2b1pa1         171 TS-FMMTPYVVTRYYRAPEVILGMGY-KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT  248 (355)
T ss_dssp             -----------CCTTCCHHHHTTCCC-CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHH
T ss_pred             cc-cccccccccccccChhhhcCCCC-CCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhh
Confidence            43 33456689999999999988766 5899999999999999999999988776555444321100             


Q ss_pred             ---------C--------------CC------CCCCHhHHHHHHHccCCCCCCCCChHhHhcCccccccCC
Q 016991          228 ---------S--------------CP------FWFSTGATSLIHKILDPNPKTRIRIEGIRKHPWFRKNYN  269 (379)
Q Consensus       228 ---------~--------------~p------~~~s~~~~~li~~~L~~dP~~R~s~~~il~hp~f~~~~~  269 (379)
                               .              .+      ...|+++.+||++||+.||++|||++|+|+||||+....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~  319 (355)
T d2b1pa1         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYD  319 (355)
T ss_dssp             HHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred             HHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence                     0              00      013678999999999999999999999999999987543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-55  Score=404.14  Aligned_cols=254  Identities=23%  Similarity=0.368  Sum_probs=213.3

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKVYI   86 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~~l   86 (379)
                      ..++|++++.||+|+||+||+|++..+ +.||||++......    .+.+.+|+.+|+.++|||||++++++.+ +.+|+
T Consensus        15 ~~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~----~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~l   88 (285)
T d1fmka3          15 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI   88 (285)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSC----HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred             CHHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCC----HHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEE
Confidence            457999999999999999999999755 67999999765432    2578999999999999999999999855 56899


Q ss_pred             EEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc-
Q 016991           87 ILEFVTGGELFDKIVH--QGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV-  163 (379)
Q Consensus        87 v~E~~~gg~L~~~l~~--~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~-  163 (379)
                      ||||+++|+|..++..  .+.+++.++..++.||+.||+|||++||+||||||+|||||.++++||+|||+++...... 
T Consensus        89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~  168 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  168 (285)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence            9999999999988854  3579999999999999999999999999999999999999999999999999998654432 


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s~~~~~li  241 (379)
                      ......+||+.|+|||++.+..+. .++||||+||++|||++ |.+||...+..+....+... ....|..+|+++.+||
T Consensus       169 ~~~~~~~gt~~y~aPE~~~~~~~~-~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li  247 (285)
T d1fmka3         169 TARQGAKFPIKWTAPEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLM  247 (285)
T ss_dssp             -------CCGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHH
T ss_pred             eeeccccccccccChHHHhCCCCC-cHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccCHHHHHHH
Confidence            223446799999999999887764 89999999999999999 56666777777777776554 4567888999999999


Q ss_pred             HHccCCCCCCCCChHhHhc--Ccccccc
Q 016991          242 HKILDPNPKTRIRIEGIRK--HPWFRKN  267 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~--hp~f~~~  267 (379)
                      .+||+.||++|||++++++  ++||...
T Consensus       248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         248 CQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            9999999999999999988  8888654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-54  Score=399.92  Aligned_cols=253  Identities=25%  Similarity=0.341  Sum_probs=209.7

Q ss_pred             ceeccCeeeeeeecccCCeEEEEEEECCCC----cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 016991            5 TRRVAKYEVGRTIGEGTFAKVRFAQNRETG----ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS   80 (379)
Q Consensus         5 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~----~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~   80 (379)
                      ....+.|++.+.||+|+||+||+|.++.++    ..||||++....  .......+.+|+.+|+.++|||||++++++.+
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~   80 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK   80 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec
Confidence            345578999999999999999999987655    479999986543  22334678999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCC
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALP  159 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~  159 (379)
                      .+..++||||+.++++.+.+... +.+++.++..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++..
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcc
Confidence            99999999999999999888655 57999999999999999999999999999999999999999999999999999865


Q ss_pred             CCCcc---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhc-ccCCCCCCC
Q 016991          160 QQGVE---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAA-EFSCPFWFS  234 (379)
Q Consensus       160 ~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~s  234 (379)
                      .....   ......||+.|+|||++.+..++ .++||||+||++|||++ |.+||.+.+..++.+.+..+ ..+.|..++
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~-~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  239 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFT-SASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP  239 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCC-HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCB
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCC-CcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhH
Confidence            44222   22345689999999999887764 89999999999999998 46666667777777776654 456677899


Q ss_pred             HhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          235 TGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       235 ~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +++.+||.+||+.||++|||+.+|++
T Consensus       240 ~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         240 SAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            99999999999999999999999987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-54  Score=407.52  Aligned_cols=251  Identities=22%  Similarity=0.317  Sum_probs=212.0

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECCCCc----EEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRETGE----SVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTK   83 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~----~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~   83 (379)
                      .++|++++.||+|+||+||+|.+..+|+    .||+|.+....  .....+.+.+|+.+|+.++|||||++++++.++ .
T Consensus         8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~   84 (317)
T d1xkka_           8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-T   84 (317)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-S
T ss_pred             HHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-C
Confidence            3679999999999999999999988887    57777775432  222457899999999999999999999999875 5


Q ss_pred             EEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           84 VYIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        84 ~~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      .++++||+.+|+|.+.+... ..+++..+..++.||+.||+|||++||+||||||+|||++.++++||+|||++......
T Consensus        85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            67888999999999888764 57999999999999999999999999999999999999999999999999999865543


Q ss_pred             cc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcc-cCCCCCCCHhHH
Q 016991          163 VE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAE-FSCPFWFSTGAT  238 (379)
Q Consensus       163 ~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~-~~~p~~~s~~~~  238 (379)
                      ..  ......||+.|+|||++.+..| +.++||||+||++|||++ |.+||.+.+..++...+..+. ...|..+++++.
T Consensus       165 ~~~~~~~~~~gt~~y~APE~l~~~~~-~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~  243 (317)
T d1xkka_         165 EKEYHAEGGKVPIKWMALESILHRIY-THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY  243 (317)
T ss_dssp             CC--------CCTTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHH
T ss_pred             cccccccccccCccccChHHHhcCCC-ChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHH
Confidence            22  2334568999999999988776 599999999999999998 899999988888877776654 567888999999


Q ss_pred             HHHHHccCCCCCCCCChHhHhcCc
Q 016991          239 SLIHKILDPNPKTRIRIEGIRKHP  262 (379)
Q Consensus       239 ~li~~~L~~dP~~R~s~~~il~hp  262 (379)
                      +||.+||+.||.+|||+.+|++|.
T Consensus       244 ~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         244 MIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhCCCChhhCcCHHHHHHHH
Confidence            999999999999999999999873

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-54  Score=397.81  Aligned_cols=251  Identities=25%  Similarity=0.400  Sum_probs=206.2

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECC-CC--cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRE-TG--ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~-~~--~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~~~   84 (379)
                      .++|++.+.||+|+||+||+|+... ++  ..||||++.+.........+.+.+|+.+|+.++||||+++++++.+ ...
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            4689999999999999999998643 33  3789999987666566667889999999999999999999999976 467


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc
Q 016991           85 YIILEFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV  163 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~  163 (379)
                      ++||||+++|++.+.+... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~  165 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  165 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCC
Confidence            8999999999999877654 579999999999999999999999999999999999999999999999999998764422


Q ss_pred             c---cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhccc--CCCCCCCHhH
Q 016991          164 E---LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINAAEF--SCPFWFSTGA  237 (379)
Q Consensus       164 ~---~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~  237 (379)
                      .   .....+|+..|+|||++.+..+ +.++||||+||++|||++ |.+||.+.+..+....+.....  ..|..+|+++
T Consensus       166 ~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  244 (273)
T d1u46a_         166 DHYVMQEHRKVPFAWCAPESLKTRTF-SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI  244 (273)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEE-EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred             CcceecCccccCcccCCHHHHhCCCC-CcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHH
Confidence            1   2234567889999999988665 589999999999999998 8999999999888888876654  4566789999


Q ss_pred             HHHHHHccCCCCCCCCChHhHhc
Q 016991          238 TSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       238 ~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+||.+||+.||++|||+++|++
T Consensus       245 ~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         245 YNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999864

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-54  Score=394.05  Aligned_cols=245  Identities=24%  Similarity=0.427  Sum_probs=208.8

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeE
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLA-SRTKV   84 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~-~~~~~   84 (379)
                      ...++|++++.||+|+||.||+|++.  |..||||+++++.     ..+.+.+|+.++++++||||+++++++. ..+.+
T Consensus         4 i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~   76 (262)
T d1byga_           4 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL   76 (262)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred             cCHHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcE
Confidence            45678999999999999999999984  7899999996543     3367889999999999999999999885 45678


Q ss_pred             EEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCC
Q 016991           85 YIILEFVTGGELFDKIVHQG--RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQG  162 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~--~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~  162 (379)
                      |+||||+++|+|.+++...+  .+++..+..++.||+.||.|||+.+|+||||||+|||++.+|++||+|||++..... 
T Consensus        77 ~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~-  155 (262)
T d1byga_          77 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-  155 (262)
T ss_dssp             EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred             EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCC-
Confidence            99999999999999996543  589999999999999999999999999999999999999999999999999876443 


Q ss_pred             cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh-cccCCCCCCCHhHHHH
Q 016991          163 VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYKKINA-AEFSCPFWFSTGATSL  240 (379)
Q Consensus       163 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~~i~~-~~~~~p~~~s~~~~~l  240 (379)
                        .....++++.|+|||++.+..+ +.++||||+||++|||++ |.+||...+.......+.. ....+|..+++++.+|
T Consensus       156 --~~~~~~~~~~y~aPE~l~~~~~-t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l  232 (262)
T d1byga_         156 --TQDTGKLPVKWTAPEALREKKF-STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEV  232 (262)
T ss_dssp             --------CCTTTSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHH
T ss_pred             --CCccccccccCCChHHHhCCCC-ChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHH
Confidence              2345678999999999988776 599999999999999998 8999998888888888765 4567888899999999


Q ss_pred             HHHccCCCCCCCCChHhHhcC
Q 016991          241 IHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       241 i~~~L~~dP~~R~s~~~il~h  261 (379)
                      |.+||+.||.+|||+.+++++
T Consensus       233 i~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         233 MKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcccCHhHCcCHHHHHHH
Confidence            999999999999999999873

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-54  Score=402.78  Aligned_cols=252  Identities=22%  Similarity=0.324  Sum_probs=215.9

Q ss_pred             eeccCeeeeeeecccCCeEEEEEEECCCCcE--EEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 016991            6 RRVAKYEVGRTIGEGTFAKVRFAQNRETGES--VAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASRT   82 (379)
Q Consensus         6 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~--vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~~   82 (379)
                      ...++|++.+.||+|+||+||+|.++.+|..  ||||.+....  .....+.+.+|+.+|+.+ +|||||++++++.+.+
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~   84 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   84 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCC
Confidence            3467999999999999999999999988875  5667664322  223446789999999998 7999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYG  146 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~  146 (379)
                      .+|+||||++||+|.+++...                ..+++.++..++.||+.||.|||++||+||||||+|||++.++
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC
Confidence            999999999999999999653                5799999999999999999999999999999999999999999


Q ss_pred             CeEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhc
Q 016991          147 NLKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPTLYKKINAA  225 (379)
Q Consensus       147 ~lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~~~~~~~i~~~  225 (379)
                      .+||+|||++...... ......+||+.|+|||.+.+..| +.++|||||||++|+|++| .+||.+.+..++.+.+..+
T Consensus       165 ~~kl~DfG~a~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~-~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~  242 (309)
T d1fvra_         165 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVY-TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  242 (309)
T ss_dssp             CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEE-CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT
T ss_pred             ceEEcccccccccccc-ccccceecCCcccchHHhccCCC-CccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhc
Confidence            9999999998755432 22345679999999999988776 4899999999999999996 5789988988888887654


Q ss_pred             -ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          226 -EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       226 -~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                       .+..|..+++++.+||.+||+.||++|||++++++|
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         243 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             566778899999999999999999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.8e-54  Score=399.18  Aligned_cols=250  Identities=24%  Similarity=0.328  Sum_probs=217.3

Q ss_pred             ccCeeeeeeecccCCeEEEEEEEC-----CCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNR-----ETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT   82 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~-----~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~   82 (379)
                      .++|++++.||+|+||+||+|+.+     .++..||||+++...  .....+++.+|+.+|+.++||||+++++++...+
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~   89 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAVGK   89 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcCCCCcccceeeeccCC
Confidence            457999999999999999999975     356899999987543  3334578999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCC
Q 016991           83 KVYIILEFVTGGELFDKIVHQG------------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPE  138 (379)
Q Consensus        83 ~~~lv~E~~~gg~L~~~l~~~~------------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~  138 (379)
                      ..+++|||+++|+|.+++....                        .+++..+..++.||+.||+|||++||+||||||+
T Consensus        90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~  169 (301)
T d1lufa_          90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR  169 (301)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred             ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEccc
Confidence            9999999999999999986532                        4889999999999999999999999999999999


Q ss_pred             cEEEccCCCeEEeeeccccCCCCC--cccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCCh
Q 016991          139 NLLLDSYGNLKVSDFGLSALPQQG--VELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDL  215 (379)
Q Consensus       139 NIll~~~~~lkl~DfGl~~~~~~~--~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~  215 (379)
                      |||+|.++++||+|||+|......  .....+.+|++.|+|||++.+..|+ .++|||||||++|||++| .+||.+.+.
T Consensus       170 NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t-~ksDVwS~Gvvl~ell~~~~~p~~~~~~  248 (301)
T d1lufa_         170 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT-TESDVWAYGVVLWEIFSYGLQPYYGMAH  248 (301)
T ss_dssp             GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             ceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCC-hhhhhccchhhHHHHHccCCCCCCCCCH
Confidence            999999999999999998754332  2233456799999999999887775 899999999999999998 478998888


Q ss_pred             HHHHHHHHhccc-CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          216 PTLYKKINAAEF-SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       216 ~~~~~~i~~~~~-~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+....+..+.. ..|..+++++.+||.+||+.||++|||+.||++
T Consensus       249 ~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         249 EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            888888877654 467789999999999999999999999999865

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-54  Score=399.06  Aligned_cols=251  Identities=22%  Similarity=0.347  Sum_probs=201.8

Q ss_pred             ccCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLAS-   80 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~-   80 (379)
                      .++|++++.||+|+||+||+|.+..     +++.||||++....  .....+.+.+|..++.++ +|+||+.+++++.. 
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            4789999999999999999999754     45789999987543  223346677788777666 68999999998765 


Q ss_pred             CCeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc
Q 016991           81 RTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS  144 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~  144 (379)
                      ...+++|||||++|+|.+++...                ..+++.++..++.||+.||+|||++||+||||||+|||++.
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~  169 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE  169 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECC
Confidence            45689999999999999999753                24889999999999999999999999999999999999999


Q ss_pred             CCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHH-HHH
Q 016991          145 YGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPT-LYK  220 (379)
Q Consensus       145 ~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~~~-~~~  220 (379)
                      ++++||+|||+|+......  ....+.+||+.|+|||++.+..+ +.++||||+||++|||++| .+||.+.+... ...
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~-~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~  248 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY-TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR  248 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCC-CcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            9999999999997654422  23345679999999999988766 5999999999999999986 67887765543 334


Q ss_pred             HHHh-cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          221 KINA-AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       221 ~i~~-~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+.. ..+..|..+|+++.+||.+||+.||++|||++|+++|
T Consensus       249 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         249 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4433 3466778899999999999999999999999999986

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-53  Score=397.17  Aligned_cols=251  Identities=24%  Similarity=0.399  Sum_probs=214.5

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCC-------cEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETG-------ESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVL   78 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~-------~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~   78 (379)
                      ..++|++++.||+|+||.||+|++..++       ..||||++.+..  .......+.+|...+.++ +|||||++++++
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~   88 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGAC   88 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccc
Confidence            4589999999999999999999976554       479999997654  233456788888888877 899999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEE
Q 016991           79 ASRTKVYIILEFVTGGELFDKIVHQ----------------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLL  142 (379)
Q Consensus        79 ~~~~~~~lv~E~~~gg~L~~~l~~~----------------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll  142 (379)
                      .+++.+|+||||+++|+|.+++...                ..+++.++..++.||+.||+|||++||+||||||+|||+
T Consensus        89 ~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl  168 (299)
T d1fgka_          89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV  168 (299)
T ss_dssp             CSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee
Confidence            9999999999999999999999754                358999999999999999999999999999999999999


Q ss_pred             ccCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 016991          143 DSYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLY  219 (379)
Q Consensus       143 ~~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~  219 (379)
                      +.++.+||+|||++.......  ......+|++.|+|||++.+..|+ .++|||||||++|+|++ |.+||.+.+...+.
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~-~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~  247 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT-HQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF  247 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCC-HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCC-chhhhHHhHHHHHHhccCCCCCCCCCCHHHHH
Confidence            999999999999998654421  233456799999999999887774 99999999999999997 79999999888888


Q ss_pred             HHHHhc-ccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          220 KKINAA-EFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       220 ~~i~~~-~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      +.+..+ .+..|.++|+++.+||.+||+.||++|||+.|+++
T Consensus       248 ~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         248 KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            877654 46678889999999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-52  Score=391.38  Aligned_cols=251  Identities=21%  Similarity=0.259  Sum_probs=218.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECC-----CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRE-----TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASR   81 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~-----~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~   81 (379)
                      ..++|++++.||+|+||+||+|.+..     ++..||||++++..  .......+.+|+.++++++||||+++++++...
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~   95 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG   95 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecC
Confidence            34799999999999999999998752     45789999997543  333456789999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEe
Q 016991           82 TKVYIILEFVTGGELFDKIVHQ----------GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVS  151 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~----------~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~  151 (379)
                      +..++||||+++|+|.+++...          ..+++..+..++.|++.||.|||+++|+||||||+|||++.++++||+
T Consensus        96 ~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          96 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEe
Confidence            9999999999999999988643          246889999999999999999999999999999999999999999999


Q ss_pred             eeccccCCCCCcc--cccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhcc-c
Q 016991          152 DFGLSALPQQGVE--LLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAG-YLPFGETDLPTLYKKINAAE-F  227 (379)
Q Consensus       152 DfGl~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g-~~Pf~~~~~~~~~~~i~~~~-~  227 (379)
                      |||++........  .....+||+.|+|||.+.+..+. .++||||+||++|||++| .+||.+.+..+....+..+. .
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~-~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~  254 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT-TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL  254 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCC-HHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCC-cccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCC
Confidence            9999976544222  23345789999999999887764 899999999999999997 68999988888888776654 4


Q ss_pred             CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          228 SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      ..|..+++.+.+||.+||+.||++|||++++++
T Consensus       255 ~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            567889999999999999999999999999998

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-52  Score=389.75  Aligned_cols=250  Identities=24%  Similarity=0.360  Sum_probs=214.0

Q ss_pred             ccCeeeeeeecccCCeEEEEEEE-----CCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 016991            8 VAKYEVGRTIGEGTFAKVRFAQN-----RETGESVAMKVLAKSTILKHRMVDQIKREISIMKIV-RHPNIVRLHEVLASR   81 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~g~V~~a~~-----~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~hp~Iv~l~~~~~~~   81 (379)
                      .++|++++.||+|+||.||+|.+     ..++..||||++.+..  .......+.+|+.+++.+ +|||||++++++.+.
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~   99 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeC
Confidence            47899999999999999999986     3567899999997654  233456789999999998 699999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc
Q 016991           82 TKVYIILEFVTGGELFDKIVHQG------------------RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD  143 (379)
Q Consensus        82 ~~~~lv~E~~~gg~L~~~l~~~~------------------~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~  143 (379)
                      ...|+|||||++|+|.+++....                  .+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus       100 ~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~  179 (311)
T d1t46a_         100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT  179 (311)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccccc
Confidence            99999999999999999997543                  589999999999999999999999999999999999999


Q ss_pred             cCCCeEEeeeccccCCCCCc--ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 016991          144 SYGNLKVSDFGLSALPQQGV--ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMA-GYLPFGETDLPTLYK  220 (379)
Q Consensus       144 ~~~~lkl~DfGl~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~-g~~Pf~~~~~~~~~~  220 (379)
                      .++++|++|||++.......  ......+||+.|+|||++.+..+ +.++|||||||++|+|++ |.+||...+......
T Consensus       180 ~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         180 HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY-TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCC-CCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999999998765432  22345689999999999987665 599999999999999998 777787766654444


Q ss_pred             HH-Hh-cccCCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          221 KI-NA-AEFSCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       221 ~i-~~-~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                      .+ .. .....|..+|+++.+||.+||+.||++|||+++|++
T Consensus       259 ~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            43 33 234566778999999999999999999999999986

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-51  Score=380.28  Aligned_cols=246  Identities=23%  Similarity=0.271  Sum_probs=203.4

Q ss_pred             eeeeecccCCeEEEEEEECCCC---cEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEEEE
Q 016991           13 VGRTIGEGTFAKVRFAQNRETG---ESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLAS-RTKVYIIL   88 (379)
Q Consensus        13 ~~~~LG~G~~g~V~~a~~~~~~---~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~-~~~~~lv~   88 (379)
                      +.++||+|+||+||+|.+..++   ..||||++++..  .....+.+.+|+++|++++||||+++++++.. ++..++||
T Consensus        31 ~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEETTEEEEEEEECC----CEEEEEEEECCCC--CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             cceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            3678999999999999987654   368999986532  44456889999999999999999999999765 56899999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeeccccCCCCCc----
Q 016991           89 EFVTGGELFDKIVHQ-GRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGLSALPQQGV----  163 (379)
Q Consensus        89 E~~~gg~L~~~l~~~-~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl~~~~~~~~----  163 (379)
                      |||++|+|.+++... ..+++..+..++.|++.||.|||+.||+||||||+|||+++++.+||+|||++.......    
T Consensus       109 E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             EEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            999999999988754 357788899999999999999999999999999999999999999999999998654421    


Q ss_pred             ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHh-cccCCCCCCCHhHHHHH
Q 016991          164 ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGE-TDLPTLYKKINA-AEFSCPFWFSTGATSLI  241 (379)
Q Consensus       164 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~-~~~~~~~~~i~~-~~~~~p~~~s~~~~~li  241 (379)
                      .......||+.|+|||++.+..+ +.++|||||||++|||++|..||.. .+.......+.. ..+..|..+++++.+||
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~-~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li  267 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKF-TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVM  267 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCC-CHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHH
T ss_pred             eecccccccccccChHHHhcCCC-CChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHH
Confidence            12233568999999999987766 5999999999999999997666644 333344444433 35567888999999999


Q ss_pred             HHccCCCCCCCCChHhHhcC
Q 016991          242 HKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       242 ~~~L~~dP~~R~s~~~il~h  261 (379)
                      .+||+.||++|||+.|+++|
T Consensus       268 ~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         268 LKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHH
Confidence            99999999999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-50  Score=377.49  Aligned_cols=255  Identities=21%  Similarity=0.292  Sum_probs=203.5

Q ss_pred             ec-cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeE
Q 016991            7 RV-AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPN-IVRLHEVLASRTKV   84 (379)
Q Consensus         7 ~~-~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~-Iv~l~~~~~~~~~~   84 (379)
                      ++ ++|++++.||+|+||+||+|++..+|+.||||++......     +.+.+|+++++.++|+| |+.+..+..+.+..
T Consensus         4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             EETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEE
T ss_pred             eECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-----HHHHHHHHHHHHccCCCcccEEEEEEecCCEE
Confidence            44 4799999999999999999999999999999998764322     34778999999998766 55556667888999


Q ss_pred             EEEEeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEc---cCCCeEEeeeccccCCC
Q 016991           85 YIILEFVTGGELFDKIV-HQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLD---SYGNLKVSDFGLSALPQ  160 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~-~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~---~~~~lkl~DfGl~~~~~  160 (379)
                      ++||||+ ++++.+.+. ..+.+++..+..++.|++.||+|||++||+||||||+|||++   .+..+||+|||+|....
T Consensus        79 ~ivme~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          79 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             EEEEEEc-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence            9999999 556655554 456899999999999999999999999999999999999986   34579999999998654


Q ss_pred             CCc-------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHhccc---
Q 016991          161 QGV-------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLPTLYK---KINAAEF---  227 (379)
Q Consensus       161 ~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~~~~~---~i~~~~~---  227 (379)
                      ...       ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..........   .......   
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~  236 (299)
T d1ckia_         158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQ-SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP  236 (299)
T ss_dssp             CTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCC-CHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC
T ss_pred             ccccccceeccccCCcCCCccccCHHHHhCCCC-CChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC
Confidence            321       12345689999999999988776 499999999999999999999997755433222   2211111   


Q ss_pred             --CCCCCCCHhHHHHHHHccCCCCCCCCChH---hHhcCccccccC
Q 016991          228 --SCPFWFSTGATSLIHKILDPNPKTRIRIE---GIRKHPWFRKNY  268 (379)
Q Consensus       228 --~~p~~~s~~~~~li~~~L~~dP~~R~s~~---~il~hp~f~~~~  268 (379)
                        ..+..+|+++.+||.+||+.||.+||+++   ++++|+|.+..+
T Consensus       237 ~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~~  282 (299)
T d1ckia_         237 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF  282 (299)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred             hhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcCC
Confidence              23456899999999999999999999987   457788765543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.3e-49  Score=367.99  Aligned_cols=247  Identities=20%  Similarity=0.278  Sum_probs=206.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH-PNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h-p~Iv~l~~~~~~~~~~~   85 (379)
                      .-++|++++.||+|+||+||+|++..+|+.||||++.....     ...+.+|+++++.++| +||+.+++++......|
T Consensus         3 ig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   77 (293)
T d1csna_           3 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV   77 (293)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred             CCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccE
Confidence            34689999999999999999999999999999999865432     1346789999999976 89999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEcc-----CCCeEEeeeccccCC
Q 016991           86 IILEFVTGGELFDKIVHQG-RLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDS-----YGNLKVSDFGLSALP  159 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~-~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~-----~~~lkl~DfGl~~~~  159 (379)
                      +||||+ |++|.+.+...+ .+++..+..++.|++.||+|||++||+||||||+|||++.     ++.+||+|||+|+..
T Consensus        78 ~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~  156 (293)
T d1csna_          78 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  156 (293)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             EEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEc
Confidence            999999 789999887654 7999999999999999999999999999999999999974     578999999999765


Q ss_pred             CCCc-------ccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHhccc--
Q 016991          160 QQGV-------ELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDL---PTLYKKINAAEF--  227 (379)
Q Consensus       160 ~~~~-------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~---~~~~~~i~~~~~--  227 (379)
                      ....       ....+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+.   ......+.....  
T Consensus       157 ~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~-~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (293)
T d1csna_         157 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ-SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST  235 (293)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC-CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred             ccCccccceeecccCceEEchhhcCHHHhcCCCC-ChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCC
Confidence            4321       12345689999999999988776 4899999999999999999999976443   233333332221  


Q ss_pred             ---CCCCCCCHhHHHHHHHccCCCCCCCCChHhHhc
Q 016991          228 ---SCPFWFSTGATSLIHKILDPNPKTRIRIEGIRK  260 (379)
Q Consensus       228 ---~~p~~~s~~~~~li~~~L~~dP~~R~s~~~il~  260 (379)
                         ..+..+|+++.+++..|+..+|..||+++.+.+
T Consensus       236 ~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence               123568899999999999999999999887654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-49  Score=367.80  Aligned_cols=246  Identities=21%  Similarity=0.318  Sum_probs=191.6

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----eE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNIVRLHEVLASRT----KV   84 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~Iv~l~~~~~~~~----~~   84 (379)
                      .+|.+.+.||+|+||.||+|+.  +|+.||||+++.+..    .......|+..++.++|||||++++++...+    .+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~----~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~   76 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL   76 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch----hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEE
Confidence            5789999999999999999987  589999999865421    1122334555667889999999999987543    68


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH--------CCceeecCCCCcEEEccCCCeEEeeeccc
Q 016991           85 YIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHS--------KGVYHRDLKPENLLLDSYGNLKVSDFGLS  156 (379)
Q Consensus        85 ~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~--------~gi~HrDlkp~NIll~~~~~lkl~DfGl~  156 (379)
                      |+||||+++|+|.+++.+ .++++.....++.|++.||.|+|+        +||+||||||+||||+.++++||+|||++
T Consensus        77 ~lv~Ey~~~g~L~~~l~~-~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          77 WLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            999999999999999976 579999999999999999999996        59999999999999999999999999998


Q ss_pred             cCCCCCcc----cccccccCCCCCchhhhccCCC-----CCCchhHHHHHHHHHHHHhCCCCCCCCC-------------
Q 016991          157 ALPQQGVE----LLHTTCGTPNYVAPEVLSNRGY-----DGSAADVWSCGVILFVLMAGYLPFGETD-------------  214 (379)
Q Consensus       157 ~~~~~~~~----~~~~~~gt~~y~aPE~l~~~~~-----~~~~~DiwSlGvil~~ll~g~~Pf~~~~-------------  214 (379)
                      ........    .....+||+.|+|||++.+...     .+.++|||||||+||||++|..||....             
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~  235 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence            76543221    2345689999999999875432     2468999999999999999998874321             


Q ss_pred             --hHHHHHHHHhccc--CCCCC-----CCHhHHHHHHHccCCCCCCCCChHhHhcC
Q 016991          215 --LPTLYKKINAAEF--SCPFW-----FSTGATSLIHKILDPNPKTRIRIEGIRKH  261 (379)
Q Consensus       215 --~~~~~~~i~~~~~--~~p~~-----~s~~~~~li~~~L~~dP~~R~s~~~il~h  261 (379)
                        .....+.+.....  .+|..     ....+.+|+.+||+.||++|||+.|++++
T Consensus       236 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         236 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             CCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             chHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence              1222222322222  22222     12358899999999999999999998773

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-48  Score=371.73  Aligned_cols=251  Identities=23%  Similarity=0.420  Sum_probs=196.9

Q ss_pred             cCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-----------CCCcceEEEE
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-----------HPNIVRLHEV   77 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----------hp~Iv~l~~~   77 (379)
                      +||++++.||+|+||+||+|++..+|+.||||++++..    ...+.+.+|+.+++.++           |+||++++++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~   88 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   88 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence            57999999999999999999999999999999997643    23356778898888775           5789999988


Q ss_pred             EE--eCCeEEEEEeccCCCChHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHH-CCceeecCCCCcEEEccCCC----
Q 016991           78 LA--SRTKVYIILEFVTGGELFDKI---VHQGRLLENDCRRYFQQLIDAVAHCHS-KGVYHRDLKPENLLLDSYGN----  147 (379)
Q Consensus        78 ~~--~~~~~~lv~E~~~gg~L~~~l---~~~~~l~e~~~~~~~~qil~~l~ylH~-~gi~HrDlkp~NIll~~~~~----  147 (379)
                      +.  .....+++++++..+......   .....+++..++.++.||+.||.|||+ .||+||||||+|||++.++.    
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence            75  446677777776655433332   233578999999999999999999998 89999999999999987664    


Q ss_pred             --eEEeeeccccCCCCCcccccccccCCCCCchhhhccCCCCCCchhHHHHHHHHHHHHhCCCCCCCCChH-------HH
Q 016991          148 --LKVSDFGLSALPQQGVELLHTTCGTPNYVAPEVLSNRGYDGSAADVWSCGVILFVLMAGYLPFGETDLP-------TL  218 (379)
Q Consensus       148 --lkl~DfGl~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlGvil~~ll~g~~Pf~~~~~~-------~~  218 (379)
                        ++++|||.+.....   .....+||+.|+|||++.+..++ .++||||+||++++|++|+.||...+..       .+
T Consensus       169 ~~~kl~dfg~s~~~~~---~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~  244 (362)
T d1q8ya_         169 IQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLGAPWG-CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  244 (362)
T ss_dssp             EEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHTCCCC-THHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             ceeeEeeccccccccc---ccccccccccccChhhccccCCC-ccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence              99999999875443   33567899999999999887775 8999999999999999999999654321       01


Q ss_pred             HHHHH-----------------------------------------hcccCCCCCCCHhHHHHHHHccCCCCCCCCChHh
Q 016991          219 YKKIN-----------------------------------------AAEFSCPFWFSTGATSLIHKILDPNPKTRIRIEG  257 (379)
Q Consensus       219 ~~~i~-----------------------------------------~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~~  257 (379)
                      ...+.                                         ......+...++++.+||.+||+.||.+|||++|
T Consensus       245 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e  324 (362)
T d1q8ya_         245 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  324 (362)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence            11000                                         0011112224678999999999999999999999


Q ss_pred             HhcCcccccc
Q 016991          258 IRKHPWFRKN  267 (379)
Q Consensus       258 il~hp~f~~~  267 (379)
                      +|+||||+..
T Consensus       325 ~L~Hp~f~~~  334 (362)
T d1q8ya_         325 LVNHPWLKDT  334 (362)
T ss_dssp             HHTCGGGTTC
T ss_pred             HhcCcccCCC
Confidence            9999999843

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.94  E-value=2.9e-27  Score=204.51  Aligned_cols=137  Identities=16%  Similarity=0.236  Sum_probs=109.5

Q ss_pred             eeeeeeecccCCeEEEEEEECCCCcEEEEEEeeccccc---------------chHHHHHHHHHHHHHHhCCCCCcceEE
Q 016991           11 YEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTIL---------------KHRMVDQIKREISIMKIVRHPNIVRLH   75 (379)
Q Consensus        11 y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~---------------~~~~~~~~~~Ei~~l~~l~hp~Iv~l~   75 (379)
                      |.+++.||+|+||+||+|.+. +|+.||||+++.....               .........+|...+..+.|++++..+
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~   80 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY   80 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence            568999999999999999985 6899999987532110               011223456789999999999999988


Q ss_pred             EEEEeCCeEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeecCCCCcEEEccCCCeEEeeecc
Q 016991           76 EVLASRTKVYIILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDSYGNLKVSDFGL  155 (379)
Q Consensus        76 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH~~gi~HrDlkp~NIll~~~~~lkl~DfGl  155 (379)
                      ++..    .+++|||+++..+.       .+++..+..++.|++.+|.|||++||+||||||+|||++++ .++|+|||+
T Consensus        81 ~~~~----~~lvme~~~~~~~~-------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~  148 (191)
T d1zara2          81 AWEG----NAVLMELIDAKELY-------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQ  148 (191)
T ss_dssp             EEET----TEEEEECCCCEEGG-------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTT
T ss_pred             EecC----CEEEEEeecccccc-------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCC
Confidence            7632    37999999886542       35666778899999999999999999999999999999965 489999999


Q ss_pred             ccCCC
Q 016991          156 SALPQ  160 (379)
Q Consensus       156 ~~~~~  160 (379)
                      |....
T Consensus       149 a~~~~  153 (191)
T d1zara2         149 SVEVG  153 (191)
T ss_dssp             CEETT
T ss_pred             cccCC
Confidence            86544

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.58  E-value=1.4e-07  Score=82.85  Aligned_cols=141  Identities=13%  Similarity=0.109  Sum_probs=93.7

Q ss_pred             eccCeeeeeeecccCCeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 016991            7 RVAKYEVGRTIGEGTFAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVR-HPNIVRLHEVLASRTKVY   85 (379)
Q Consensus         7 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-hp~Iv~l~~~~~~~~~~~   85 (379)
                      .++.|+..+..+.++.+.||+...  ++..+++|+.......   ....+.+|...++.+. +--+.+++.+....+..|
T Consensus        12 ~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~---~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          12 LIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             hhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCccc---chhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            467888888876677789998753  4667888887543321   1234677888877664 333667788888889999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 016991           86 IILEFVTGGELFDKIVHQGRLLENDCRRYFQQLIDAVAHCH---------------------------------------  126 (379)
Q Consensus        86 lv~E~~~gg~L~~~l~~~~~l~e~~~~~~~~qil~~l~ylH---------------------------------------  126 (379)
                      +||++++|.++.+.....     .....++.++...+..||                                       
T Consensus        87 lv~~~l~G~~~~~~~~~~-----~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T d1j7la_          87 LLMSEADGVLCSEEYEDE-----QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EEEECCSSEEHHHHTTTC-----SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTT
T ss_pred             EEEEeccccccccccccc-----ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhccccc
Confidence            999999987775433211     111112222323333333                                       


Q ss_pred             --------------H------CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          127 --------------S------KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       127 --------------~------~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                                    +      ..++|+|+.|.||++++++.+-|+||+.+.
T Consensus       162 ~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             CSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             ccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                          1      137999999999999976666799998764

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.20  E-value=2.4e-06  Score=79.89  Aligned_cols=81  Identities=15%  Similarity=0.171  Sum_probs=49.9

Q ss_pred             eeeecccCCeEEEEEEECCCCcEEEEEEeeccc-c-cc--hHHHHHHHHHHHHHHhCC-C--CCcceEEEEEEeCCeEEE
Q 016991           14 GRTIGEGTFAKVRFAQNRETGESVAMKVLAKST-I-LK--HRMVDQIKREISIMKIVR-H--PNIVRLHEVLASRTKVYI   86 (379)
Q Consensus        14 ~~~LG~G~~g~V~~a~~~~~~~~vaiK~i~~~~-~-~~--~~~~~~~~~Ei~~l~~l~-h--p~Iv~l~~~~~~~~~~~l   86 (379)
                      .+.||.|....||++.+..+|+.|++|.-.... . ..  ....++...|..+|+.+. +  ..+.+++.+  +.+..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            467899999999999988888899999643210 0 00  112244567888887663 2  345566654  3445678


Q ss_pred             EEeccCCCCh
Q 016991           87 ILEFVTGGEL   96 (379)
Q Consensus        87 v~E~~~gg~L   96 (379)
                      |||++.+..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999987554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.04  E-value=7.6e-06  Score=71.05  Aligned_cols=81  Identities=14%  Similarity=0.170  Sum_probs=54.8

Q ss_pred             ccCeeeeeeecccCC-eEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeE
Q 016991            8 VAKYEVGRTIGEGTF-AKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRH--PNIVRLHEVLASRTKV   84 (379)
Q Consensus         8 ~~~y~~~~~LG~G~~-g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~h--p~Iv~l~~~~~~~~~~   84 (379)
                      +..+++. .+..|.. +.||+... .++..+++|......      ...+..|...++.+..  -.+.+++.+..+.+..
T Consensus        10 l~g~~~~-~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~   81 (255)
T d1nd4a_          10 LFGYDWA-QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRD   81 (255)
T ss_dssp             TTTCEEE-ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCE
T ss_pred             ccCCceE-EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccce
Confidence            3445553 4445554 67898875 457778889764332      1346678888876643  3366788888888899


Q ss_pred             EEEEeccCCCCh
Q 016991           85 YIILEFVTGGEL   96 (379)
Q Consensus        85 ~lv~E~~~gg~L   96 (379)
                      ++||++++|.++
T Consensus        82 ~~v~~~i~G~~~   93 (255)
T d1nd4a_          82 WLLLGEVPGQDL   93 (255)
T ss_dssp             EEEEECCSSEET
T ss_pred             EEEEEeeecccc
Confidence            999999987654

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.00044  Score=62.17  Aligned_cols=69  Identities=17%  Similarity=0.188  Sum_probs=44.6

Q ss_pred             CeEEEEEEECCCCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-----ceE--EEEEEeCCeEEEEEeccCCC
Q 016991           22 FAKVRFAQNRETGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-----VRL--HEVLASRTKVYIILEFVTGG   94 (379)
Q Consensus        22 ~g~V~~a~~~~~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-----v~l--~~~~~~~~~~~lv~E~~~gg   94 (379)
                      --.||++.. ++|..|++|+.+.....    .+++..|...+..|....|     +..  -..+...+..+.+++++.|.
T Consensus        35 EN~vy~v~~-~dg~~~VlK~~rp~~~s----~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          35 ENRVYQFQD-EDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SSEEEEECC-TTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             cceeEEEEc-CCCCEEEEEEeCCCCCC----HHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            357999876 46889999997654322    3567788888877642222     111  12234567789999999763


Q ss_pred             C
Q 016991           95 E   95 (379)
Q Consensus        95 ~   95 (379)
                      .
T Consensus       110 ~  110 (325)
T d1zyla1         110 Q  110 (325)
T ss_dssp             E
T ss_pred             C
Confidence            3

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.05  E-value=0.0012  Score=60.89  Aligned_cols=77  Identities=12%  Similarity=0.204  Sum_probs=51.1

Q ss_pred             cCeeeeeeecccCCeEEEEEEECC-------CCcEEEEEEeecccccchHHHHHHHHHHHHHHhCCCCCc-ceEEEEEEe
Q 016991            9 AKYEVGRTIGEGTFAKVRFAQNRE-------TGESVAMKVLAKSTILKHRMVDQIKREISIMKIVRHPNI-VRLHEVLAS   80 (379)
Q Consensus         9 ~~y~~~~~LG~G~~g~V~~a~~~~-------~~~~vaiK~i~~~~~~~~~~~~~~~~Ei~~l~~l~hp~I-v~l~~~~~~   80 (379)
                      +..++ +.|+.|-.-.+|++....       .++.|.+++.-...    .. -...+|..+++.+.-.++ .++++++.+
T Consensus        43 ~~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~----~~-idr~~E~~i~~~ls~~gl~Pkll~~~~~  116 (395)
T d1nw1a_          43 EHLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE----TE-SHLVAESVIFTLLSERHLGPKLYGIFSG  116 (395)
T ss_dssp             GGEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC----CH-HHHHHHHHHHHHHHHTTSSSCEEEEETT
T ss_pred             cceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc----hh-hHHHHHHHHHHHHHhCCCCCeEEEEcCC
Confidence            34444 678889999999998653       34667777764211    12 245678888888753344 477776643


Q ss_pred             CCeEEEEEeccCCCC
Q 016991           81 RTKVYIILEFVTGGE   95 (379)
Q Consensus        81 ~~~~~lv~E~~~gg~   95 (379)
                          ..|+||++|..
T Consensus       117 ----g~I~efi~g~~  127 (395)
T d1nw1a_         117 ----GRLEEYIPSRP  127 (395)
T ss_dssp             ----EEEECCCCEEE
T ss_pred             ----ceEEEEecccc
Confidence                57899998744

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.45  E-value=0.0033  Score=55.60  Aligned_cols=30  Identities=27%  Similarity=0.331  Sum_probs=26.6

Q ss_pred             CCceeecCCCCcEEEccCCCeEEeeecccc
Q 016991          128 KGVYHRDLKPENLLLDSYGNLKVSDFGLSA  157 (379)
Q Consensus       128 ~gi~HrDlkp~NIll~~~~~lkl~DfGl~~  157 (379)
                      .|+||+|+.+.||+++.++..-|.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            479999999999999988777899999764

>d1ul7a_ d.129.6.1 (A:) Map/microtubule affinity-regulating kinase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: KA1-like
family: Kinase associated domain 1, KA1
domain: Map/microtubule affinity-regulating kinase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.10  E-value=0.015  Score=42.29  Aligned_cols=37  Identities=14%  Similarity=0.147  Sum_probs=31.6

Q ss_pred             ceeecCCHHHHHHHHHHHHHhCCcEEEEe-cceEEEee
Q 016991          340 RFVSRQPAQVILSNIEAVAESLSLKVHTR-NYKVCLVL  376 (379)
Q Consensus       340 rf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  376 (379)
                      .-+|..||++|+.+|+++++.+|+.|+++ +|.++.+.
T Consensus        14 ~tTS~~~P~eIm~eI~rvL~~lgv~~~~~g~y~l~c~~   51 (102)
T d1ul7a_          14 KTTSSMDPSDMMREIRKVLGANNCDYEQRERFLLFCVH   51 (102)
T ss_dssp             CCCBCSCHHHHHHHHHHHHHHTTCEEEECSTTCEEEEE
T ss_pred             ecCcCCCHHHHHHHHHHHHHHcCcEEEEcCCEEEEEEe
Confidence            34789999999999999999999999876 47777654