Query 016992
Match_columns 379
No_of_seqs 468 out of 4002
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:10:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016992.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016992hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 2.4E-55 8.2E-60 420.1 24.1 292 83-379 44-375 (376)
2 3q7e_A Protein arginine N-meth 100.0 2.6E-49 8.9E-54 378.7 27.6 301 79-379 23-349 (349)
3 1g6q_1 HnRNP arginine N-methyl 100.0 1E-48 3.5E-53 371.5 26.8 294 86-379 2-328 (328)
4 2fyt_A Protein arginine N-meth 100.0 8.6E-46 3E-50 352.9 29.4 287 85-379 27-340 (340)
5 3r0q_C Probable protein argini 100.0 9.5E-45 3.3E-49 350.3 28.0 286 83-369 24-364 (376)
6 2y1w_A Histone-arginine methyl 100.0 9.2E-37 3.1E-41 291.7 28.6 281 83-368 11-327 (348)
7 4gqb_A Protein arginine N-meth 100.0 2.6E-37 9E-42 310.9 22.3 260 96-368 323-622 (637)
8 3ua3_A Protein arginine N-meth 100.0 3.5E-36 1.2E-40 301.0 19.0 263 95-364 377-712 (745)
9 3b3j_A Histone-arginine methyl 100.0 2.1E-34 7.3E-39 285.3 25.1 277 86-367 122-434 (480)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 9.6E-17 3.3E-21 146.7 12.6 105 120-227 68-176 (261)
11 3f4k_A Putative methyltransfer 99.7 3.4E-16 1.1E-20 142.3 14.9 107 119-229 43-150 (257)
12 3kkz_A Uncharacterized protein 99.7 2.2E-16 7.5E-21 144.6 13.6 106 120-229 44-150 (267)
13 1nkv_A Hypothetical protein YJ 99.7 2.7E-16 9.1E-21 142.9 13.4 113 112-228 26-139 (256)
14 3bus_A REBM, methyltransferase 99.7 6.4E-16 2.2E-20 141.8 15.2 117 109-228 48-165 (273)
15 3p9n_A Possible methyltransfer 99.7 3E-16 1E-20 136.1 12.1 104 121-227 43-151 (189)
16 3g5l_A Putative S-adenosylmeth 99.7 5.4E-16 1.8E-20 140.7 13.9 110 112-228 34-144 (253)
17 3dlc_A Putative S-adenosyl-L-m 99.7 4.6E-16 1.6E-20 137.4 12.6 114 110-227 32-146 (219)
18 1vl5_A Unknown conserved prote 99.7 6.6E-16 2.2E-20 140.8 13.3 105 118-227 33-138 (260)
19 1ixk_A Methyltransferase; open 99.7 2.3E-16 7.9E-21 148.2 10.0 114 118-232 114-249 (315)
20 3ajd_A Putative methyltransfer 99.7 2.5E-16 8.7E-21 145.0 9.9 114 118-232 79-214 (274)
21 3hem_A Cyclopropane-fatty-acyl 99.7 1.8E-15 6.1E-20 141.1 15.8 114 110-227 60-181 (302)
22 3ofk_A Nodulation protein S; N 99.7 5.2E-16 1.8E-20 137.3 11.5 114 109-227 38-152 (216)
23 2o57_A Putative sarcosine dime 99.6 1.4E-15 4.8E-20 141.3 14.7 106 119-228 79-186 (297)
24 3jwh_A HEN1; methyltransferase 99.6 8.2E-16 2.8E-20 136.3 12.4 108 119-227 26-139 (217)
25 3vc1_A Geranyl diphosphate 2-C 99.6 1.3E-15 4.4E-20 142.9 14.4 111 112-227 106-219 (312)
26 3mti_A RRNA methylase; SAM-dep 99.6 1.3E-15 4.4E-20 131.5 13.3 106 119-227 19-133 (185)
27 2gb4_A Thiopurine S-methyltran 99.6 4.7E-16 1.6E-20 141.4 11.0 105 120-226 66-188 (252)
28 1pjz_A Thiopurine S-methyltran 99.6 3.4E-16 1.2E-20 137.7 9.3 106 119-226 19-137 (203)
29 2ift_A Putative methylase HI07 99.6 4.3E-16 1.5E-20 136.8 9.4 104 122-229 53-163 (201)
30 3jwg_A HEN1, methyltransferase 99.6 1.2E-15 4.3E-20 135.2 11.9 107 120-227 27-139 (219)
31 1ri5_A MRNA capping enzyme; me 99.6 2E-15 6.9E-20 140.0 13.7 109 120-228 62-173 (298)
32 3njr_A Precorrin-6Y methylase; 99.6 2.8E-15 9.5E-20 131.9 13.8 106 114-228 47-153 (204)
33 3thr_A Glycine N-methyltransfe 99.6 7.4E-16 2.5E-20 142.9 10.5 122 106-228 41-174 (293)
34 1wzn_A SAM-dependent methyltra 99.6 6.3E-15 2.2E-19 133.5 16.3 115 110-228 29-144 (252)
35 1ve3_A Hypothetical protein PH 99.6 3.8E-15 1.3E-19 132.5 13.9 116 106-227 24-140 (227)
36 1xxl_A YCGJ protein; structura 99.6 2.9E-15 9.8E-20 134.9 12.9 105 118-227 17-122 (239)
37 3lpm_A Putative methyltransfer 99.6 2.3E-15 8E-20 137.3 12.4 110 118-227 44-174 (259)
38 2esr_A Methyltransferase; stru 99.6 1E-15 3.5E-20 131.1 9.4 104 120-227 29-136 (177)
39 3dh0_A SAM dependent methyltra 99.6 2.4E-15 8.3E-20 133.2 12.0 106 118-227 33-141 (219)
40 3m6w_A RRNA methylase; rRNA me 99.6 5.7E-16 1.9E-20 151.7 8.4 135 85-233 76-233 (464)
41 3orh_A Guanidinoacetate N-meth 99.6 1.2E-15 4.1E-20 137.4 9.8 106 121-228 59-169 (236)
42 3fpf_A Mtnas, putative unchara 99.6 6.1E-15 2.1E-19 135.6 14.5 102 117-227 117-220 (298)
43 2yxl_A PH0851 protein, 450AA l 99.6 1.9E-15 6.6E-20 148.7 11.8 114 118-232 255-392 (450)
44 1zx0_A Guanidinoacetate N-meth 99.6 1.6E-15 5.5E-20 136.3 10.4 107 120-228 58-169 (236)
45 3e05_A Precorrin-6Y C5,15-meth 99.6 6.6E-15 2.3E-19 129.2 14.0 107 114-227 32-140 (204)
46 2xvm_A Tellurite resistance pr 99.6 9.1E-15 3.1E-19 127.2 14.6 105 118-226 28-133 (199)
47 4htf_A S-adenosylmethionine-de 99.6 4.4E-15 1.5E-19 137.2 13.2 102 122-227 68-171 (285)
48 2fpo_A Methylase YHHF; structu 99.6 2.1E-15 7.2E-20 132.4 10.4 102 122-228 54-159 (202)
49 3ocj_A Putative exported prote 99.6 1.8E-15 6.2E-20 141.4 10.6 118 109-229 107-227 (305)
50 3eey_A Putative rRNA methylase 99.6 4.2E-15 1.4E-19 129.6 12.1 108 119-227 19-137 (197)
51 3mgg_A Methyltransferase; NYSG 99.6 5.4E-15 1.8E-19 135.9 13.4 116 109-228 24-141 (276)
52 1xtp_A LMAJ004091AAA; SGPP, st 99.6 4.1E-15 1.4E-19 134.7 12.4 116 109-228 80-196 (254)
53 2pxx_A Uncharacterized protein 99.6 1.2E-15 4.2E-20 134.3 8.5 113 110-227 32-157 (215)
54 2yqz_A Hypothetical protein TT 99.6 7.6E-15 2.6E-19 133.5 13.9 116 107-228 23-140 (263)
55 2frx_A Hypothetical protein YE 99.6 2.2E-15 7.4E-20 148.8 10.8 111 122-233 117-250 (479)
56 2fhp_A Methylase, putative; al 99.6 3.1E-15 1.1E-19 129.0 10.4 105 120-228 42-153 (187)
57 4hg2_A Methyltransferase type 99.6 1.2E-15 4.3E-20 138.9 8.2 95 121-227 38-133 (257)
58 3g5t_A Trans-aconitate 3-methy 99.6 8.6E-15 2.9E-19 136.3 14.1 103 121-227 35-147 (299)
59 2frn_A Hypothetical protein PH 99.6 2E-15 6.8E-20 139.3 9.1 101 120-228 123-224 (278)
60 2a14_A Indolethylamine N-methy 99.6 5.4E-16 1.9E-20 141.9 5.3 110 119-228 52-196 (263)
61 1kpg_A CFA synthase;, cyclopro 99.6 1.1E-14 3.6E-19 134.7 14.0 114 110-228 52-167 (287)
62 1y8c_A S-adenosylmethionine-de 99.6 3.8E-15 1.3E-19 134.0 10.6 103 121-227 36-140 (246)
63 3dtn_A Putative methyltransfer 99.6 6.4E-15 2.2E-19 131.9 12.1 103 120-227 42-146 (234)
64 3uwp_A Histone-lysine N-methyl 99.6 5.2E-15 1.8E-19 141.0 11.9 113 112-228 163-287 (438)
65 3ujc_A Phosphoethanolamine N-m 99.6 4.2E-15 1.4E-19 135.4 10.7 114 111-228 44-158 (266)
66 2vdw_A Vaccinia virus capping 99.6 4.4E-15 1.5E-19 138.5 11.0 108 121-228 47-168 (302)
67 1xdz_A Methyltransferase GIDB; 99.6 7.1E-15 2.4E-19 132.5 11.9 99 121-227 69-172 (240)
68 1sqg_A SUN protein, FMU protei 99.6 4.7E-15 1.6E-19 145.1 11.5 113 118-232 242-377 (429)
69 3sm3_A SAM-dependent methyltra 99.6 8.1E-15 2.8E-19 130.9 12.0 106 121-227 29-139 (235)
70 3g89_A Ribosomal RNA small sub 99.6 7.2E-15 2.4E-19 133.3 11.7 99 121-227 79-182 (249)
71 3dr5_A Putative O-methyltransf 99.6 1.3E-14 4.5E-19 129.2 13.1 118 108-231 42-165 (221)
72 3m70_A Tellurite resistance pr 99.6 1.2E-14 4E-19 134.4 13.3 101 121-226 119-220 (286)
73 2fk8_A Methoxy mycolic acid sy 99.6 1.8E-14 6.2E-19 135.3 14.7 114 109-227 77-192 (318)
74 3g07_A 7SK snRNA methylphospha 99.6 4.2E-15 1.4E-19 138.1 10.1 107 121-227 45-218 (292)
75 3hm2_A Precorrin-6Y C5,15-meth 99.6 6.1E-15 2.1E-19 126.1 10.1 108 112-227 15-125 (178)
76 3d2l_A SAM-dependent methyltra 99.6 1.5E-14 5.2E-19 129.9 12.5 112 109-227 22-135 (243)
77 2p8j_A S-adenosylmethionine-de 99.6 8.8E-15 3E-19 128.5 10.5 105 120-228 21-127 (209)
78 3bkw_A MLL3908 protein, S-aden 99.6 1.1E-14 3.8E-19 130.9 11.3 108 114-228 35-143 (243)
79 2p7i_A Hypothetical protein; p 99.6 7.3E-15 2.5E-19 132.2 10.0 97 121-227 41-139 (250)
80 2ex4_A Adrenal gland protein A 99.6 8.9E-15 3E-19 131.8 10.5 104 122-227 79-183 (241)
81 1dus_A MJ0882; hypothetical pr 99.6 2.9E-14 9.8E-19 123.2 13.3 110 114-227 44-155 (194)
82 3l8d_A Methyltransferase; stru 99.6 5.7E-15 1.9E-19 132.8 8.9 100 121-228 52-152 (242)
83 3g2m_A PCZA361.24; SAM-depende 99.6 5.5E-15 1.9E-19 137.6 8.9 105 122-228 82-189 (299)
84 2ozv_A Hypothetical protein AT 99.6 1.2E-14 4E-19 132.8 10.3 109 118-227 32-168 (260)
85 1yzh_A TRNA (guanine-N(7)-)-me 99.5 3.6E-14 1.2E-18 125.5 12.9 106 121-227 40-154 (214)
86 2gs9_A Hypothetical protein TT 99.5 2.3E-14 7.7E-19 126.2 11.5 94 122-227 36-130 (211)
87 3evz_A Methyltransferase; NYSG 99.5 3.5E-14 1.2E-18 126.8 12.9 107 119-227 52-177 (230)
88 2kw5_A SLR1183 protein; struct 99.5 3.1E-14 1.1E-18 124.5 12.3 100 121-227 29-129 (202)
89 3gu3_A Methyltransferase; alph 99.5 2.9E-14 9.8E-19 131.8 12.6 107 118-230 18-127 (284)
90 2b9e_A NOL1/NOP2/SUN domain fa 99.5 2.7E-14 9.4E-19 133.3 12.5 138 82-233 74-238 (309)
91 3dxy_A TRNA (guanine-N(7)-)-me 99.5 2E-14 6.9E-19 127.7 11.0 105 122-227 34-148 (218)
92 3u81_A Catechol O-methyltransf 99.5 2.3E-14 8E-19 127.4 11.0 107 121-231 57-172 (221)
93 3lcc_A Putative methyl chlorid 99.5 1.3E-14 4.6E-19 130.0 9.5 103 122-227 66-169 (235)
94 3hnr_A Probable methyltransfer 99.5 1.4E-14 4.8E-19 128.3 9.5 98 121-228 44-144 (220)
95 3ntv_A MW1564 protein; rossman 99.5 3E-14 1E-18 127.8 11.8 102 121-228 70-175 (232)
96 3tfw_A Putative O-methyltransf 99.5 3.2E-14 1.1E-18 128.9 12.0 103 121-229 62-170 (248)
97 3lec_A NADB-rossmann superfami 99.5 3.4E-14 1.2E-18 126.2 11.8 102 120-226 19-122 (230)
98 3m4x_A NOL1/NOP2/SUN family pr 99.5 1.8E-14 6.2E-19 140.9 11.0 136 85-233 80-238 (456)
99 3pfg_A N-methyltransferase; N, 99.5 2E-14 6.8E-19 131.2 10.6 100 121-228 49-150 (263)
100 3k6r_A Putative transferase PH 99.5 1.3E-14 4.5E-19 132.9 9.2 99 120-226 123-222 (278)
101 2igt_A SAM dependent methyltra 99.5 1.8E-14 6.2E-19 136.0 10.3 105 121-226 152-269 (332)
102 3grz_A L11 mtase, ribosomal pr 99.5 4.1E-14 1.4E-18 124.1 11.9 99 120-227 58-157 (205)
103 1l3i_A Precorrin-6Y methyltran 99.5 4.8E-14 1.6E-18 121.6 12.1 106 114-227 25-132 (192)
104 3lbf_A Protein-L-isoaspartate 99.5 6.1E-14 2.1E-18 123.4 12.9 104 114-228 69-173 (210)
105 4fsd_A Arsenic methyltransfera 99.5 3.4E-14 1.1E-18 137.1 12.0 106 120-228 81-202 (383)
106 1nt2_A Fibrillarin-like PRE-rR 99.5 5.6E-14 1.9E-18 124.1 12.4 100 119-227 54-159 (210)
107 3fzg_A 16S rRNA methylase; met 99.5 1.6E-14 5.5E-19 123.4 8.5 112 107-226 36-149 (200)
108 3gnl_A Uncharacterized protein 99.5 4.6E-14 1.6E-18 126.4 11.7 103 120-227 19-123 (244)
109 3ou2_A SAM-dependent methyltra 99.5 6.2E-14 2.1E-18 123.7 12.5 101 120-228 44-145 (218)
110 3kr9_A SAM-dependent methyltra 99.5 5.2E-14 1.8E-18 124.8 11.8 103 120-227 13-117 (225)
111 2fca_A TRNA (guanine-N(7)-)-me 99.5 5.3E-14 1.8E-18 124.5 11.8 106 121-227 37-151 (213)
112 1jsx_A Glucose-inhibited divis 99.5 3.2E-14 1.1E-18 124.8 10.1 98 122-228 65-164 (207)
113 2nxc_A L11 mtase, ribosomal pr 99.5 5E-14 1.7E-18 128.1 11.6 107 109-227 109-216 (254)
114 3mb5_A SAM-dependent methyltra 99.5 4.9E-14 1.7E-18 127.9 11.6 106 113-227 84-192 (255)
115 3dmg_A Probable ribosomal RNA 99.5 9E-14 3.1E-18 133.6 14.0 118 107-227 216-338 (381)
116 2b3t_A Protein methyltransfera 99.5 1.1E-13 3.6E-18 127.5 13.8 122 104-228 92-237 (276)
117 3bgv_A MRNA CAP guanine-N7 met 99.5 7.5E-14 2.6E-18 130.8 13.0 108 121-228 33-154 (313)
118 3e23_A Uncharacterized protein 99.5 5.9E-14 2E-18 123.6 11.6 99 120-228 41-140 (211)
119 3h2b_A SAM-dependent methyltra 99.5 3.5E-14 1.2E-18 124.3 9.8 98 123-228 42-140 (203)
120 2p35_A Trans-aconitate 2-methy 99.5 6.4E-14 2.2E-18 127.2 11.7 105 114-228 25-131 (259)
121 2yxd_A Probable cobalt-precorr 99.5 9.2E-14 3.1E-18 119.0 11.9 103 114-228 27-130 (183)
122 2b78_A Hypothetical protein SM 99.5 5.8E-14 2E-18 135.4 11.7 109 121-229 211-331 (385)
123 3ege_A Putative methyltransfer 99.5 1.9E-14 6.5E-19 131.3 7.7 105 111-227 23-128 (261)
124 3gdh_A Trimethylguanosine synt 99.5 3.1E-15 1.1E-19 134.7 2.4 103 121-228 77-180 (241)
125 4dcm_A Ribosomal RNA large sub 99.5 1.1E-13 3.7E-18 132.8 13.1 113 114-227 214-332 (375)
126 3iv6_A Putative Zn-dependent a 99.5 4.7E-14 1.6E-18 128.3 10.0 107 112-228 35-147 (261)
127 3ccf_A Cyclopropane-fatty-acyl 99.5 5.1E-14 1.8E-18 129.6 10.3 99 118-227 53-152 (279)
128 3duw_A OMT, O-methyltransferas 99.5 7E-14 2.4E-18 124.3 10.7 103 121-229 57-167 (223)
129 3bxo_A N,N-dimethyltransferase 99.5 1.5E-13 5.3E-18 123.0 12.8 111 109-229 29-141 (239)
130 3r3h_A O-methyltransferase, SA 99.5 1.8E-14 6.3E-19 130.1 6.6 104 121-230 59-171 (242)
131 1nv8_A HEMK protein; class I a 99.5 1.1E-13 3.9E-18 127.8 12.0 122 103-227 104-247 (284)
132 1fbn_A MJ fibrillarin homologu 99.5 1.2E-13 4.1E-18 123.6 11.8 102 117-227 69-176 (230)
133 2aot_A HMT, histamine N-methyl 99.5 7E-14 2.4E-18 129.7 10.6 103 121-227 51-170 (292)
134 3tr6_A O-methyltransferase; ce 99.5 5.7E-14 1.9E-18 125.0 9.5 103 121-229 63-174 (225)
135 3tma_A Methyltransferase; thum 99.5 1.4E-13 4.8E-18 131.3 12.9 117 110-228 191-316 (354)
136 2gpy_A O-methyltransferase; st 99.5 9.6E-14 3.3E-18 124.4 10.8 104 121-230 53-161 (233)
137 1ws6_A Methyltransferase; stru 99.5 3E-14 1E-18 120.8 7.1 98 122-227 41-145 (171)
138 3bkx_A SAM-dependent methyltra 99.5 1.4E-13 4.7E-18 126.3 11.8 112 113-227 34-157 (275)
139 4dzr_A Protein-(glutamine-N5) 99.5 8.7E-15 3E-19 128.7 3.7 118 105-226 12-162 (215)
140 3i9f_A Putative type 11 methyl 99.5 4.3E-14 1.5E-18 120.0 7.8 95 120-227 15-110 (170)
141 3dli_A Methyltransferase; PSI- 99.5 6.3E-14 2.1E-18 126.1 9.1 97 120-227 39-138 (240)
142 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1.9E-13 6.6E-18 124.0 12.2 105 114-227 88-196 (258)
143 3v97_A Ribosomal RNA large sub 99.5 9.5E-14 3.3E-18 143.3 11.3 110 121-230 538-658 (703)
144 1dl5_A Protein-L-isoaspartate 99.5 2.2E-13 7.6E-18 127.9 12.8 106 114-229 67-175 (317)
145 4df3_A Fibrillarin-like rRNA/T 99.5 1.8E-13 6.1E-18 122.0 11.2 103 117-227 72-180 (233)
146 3c3p_A Methyltransferase; NP_9 99.5 1.4E-13 4.7E-18 121.3 10.3 103 121-230 55-161 (210)
147 2as0_A Hypothetical protein PH 99.5 9.7E-14 3.3E-18 134.4 10.2 111 121-231 216-337 (396)
148 1u2z_A Histone-lysine N-methyl 99.5 3.3E-13 1.1E-17 130.9 13.7 112 113-228 233-358 (433)
149 2ipx_A RRNA 2'-O-methyltransfe 99.5 2.6E-13 8.9E-18 121.6 11.9 102 118-227 73-180 (233)
150 1o54_A SAM-dependent O-methylt 99.5 1.6E-13 5.5E-18 126.3 10.7 106 114-228 104-212 (277)
151 3c0k_A UPF0064 protein YCCW; P 99.5 1.3E-13 4.5E-18 133.5 10.6 110 121-230 219-340 (396)
152 1yb2_A Hypothetical protein TA 99.5 1.2E-13 4.1E-18 127.1 9.5 106 113-228 101-210 (275)
153 3a27_A TYW2, uncharacterized p 99.5 2E-13 6.9E-18 125.4 10.9 100 119-227 116-217 (272)
154 3bzb_A Uncharacterized protein 99.5 3.4E-13 1.2E-17 124.5 12.4 117 107-226 64-202 (281)
155 1vbf_A 231AA long hypothetical 99.5 3E-13 1E-17 120.8 11.7 102 114-228 62-164 (231)
156 1o9g_A RRNA methyltransferase; 99.5 8E-14 2.7E-18 126.3 7.9 107 121-227 50-212 (250)
157 1i9g_A Hypothetical protein RV 99.5 3E-13 1E-17 124.4 11.9 106 114-227 91-201 (280)
158 2i62_A Nicotinamide N-methyltr 99.5 4.8E-14 1.6E-18 128.4 6.4 110 119-228 53-197 (265)
159 2g72_A Phenylethanolamine N-me 99.5 1.5E-13 5E-18 127.3 9.5 108 121-228 70-214 (289)
160 3cgg_A SAM-dependent methyltra 99.5 3.5E-13 1.2E-17 116.4 11.3 100 120-227 44-145 (195)
161 3ckk_A TRNA (guanine-N(7)-)-me 99.5 2.4E-13 8.4E-18 122.1 10.5 106 121-227 45-166 (235)
162 2yxe_A Protein-L-isoaspartate 99.4 5.5E-13 1.9E-17 117.7 12.2 105 114-228 69-176 (215)
163 3e8s_A Putative SAM dependent 99.4 1.5E-13 5.3E-18 121.7 8.7 103 114-228 44-151 (227)
164 2avn_A Ubiquinone/menaquinone 99.4 3.3E-13 1.1E-17 123.0 11.0 97 122-228 54-151 (260)
165 3c3y_A Pfomt, O-methyltransfer 99.4 3.4E-13 1.2E-17 121.3 10.9 104 121-230 69-182 (237)
166 1sui_A Caffeoyl-COA O-methyltr 99.4 2.2E-13 7.5E-18 123.4 9.5 103 121-229 78-190 (247)
167 2yvl_A TRMI protein, hypotheti 99.4 4.3E-13 1.5E-17 120.9 11.3 105 114-227 83-188 (248)
168 3id6_C Fibrillarin-like rRNA/T 99.4 1.5E-12 5E-17 116.3 14.1 103 118-228 72-180 (232)
169 3m33_A Uncharacterized protein 99.4 1.1E-13 3.7E-18 123.5 6.8 90 121-226 47-139 (226)
170 3htx_A HEN1; HEN1, small RNA m 99.4 6.3E-13 2.1E-17 135.7 12.8 105 119-226 718-831 (950)
171 1i1n_A Protein-L-isoaspartate 99.4 9.1E-13 3.1E-17 117.3 12.5 101 120-229 75-182 (226)
172 1g8a_A Fibrillarin-like PRE-rR 99.4 7.8E-13 2.7E-17 117.8 12.0 102 118-227 69-176 (227)
173 3mq2_A 16S rRNA methyltransfer 99.4 7.7E-14 2.6E-18 123.6 5.3 105 120-227 25-138 (218)
174 2h00_A Methyltransferase 10 do 99.4 2.7E-13 9.3E-18 123.0 8.9 105 122-227 65-190 (254)
175 2vdv_E TRNA (guanine-N(7)-)-me 99.4 6.6E-13 2.3E-17 120.0 11.1 107 120-227 47-171 (246)
176 2avd_A Catechol-O-methyltransf 99.4 3.4E-13 1.2E-17 120.2 9.0 103 121-229 68-179 (229)
177 4dmg_A Putative uncharacterize 99.4 4E-13 1.4E-17 129.4 10.0 107 121-231 213-328 (393)
178 2hnk_A SAM-dependent O-methylt 99.4 3.9E-13 1.4E-17 120.9 9.4 102 121-228 59-180 (239)
179 3cbg_A O-methyltransferase; cy 99.4 7.1E-13 2.4E-17 118.8 11.0 104 121-230 71-183 (232)
180 3ggd_A SAM-dependent methyltra 99.4 2.4E-13 8.2E-18 122.5 7.9 102 120-227 54-161 (245)
181 2b25_A Hypothetical protein; s 99.4 4.3E-13 1.5E-17 126.9 9.8 102 117-226 100-216 (336)
182 2qe6_A Uncharacterized protein 99.4 1.4E-12 4.7E-17 119.9 12.9 103 122-228 77-195 (274)
183 1wxx_A TT1595, hypothetical pr 99.4 3.3E-13 1.1E-17 130.0 9.0 108 122-231 209-327 (382)
184 2yx1_A Hypothetical protein MJ 99.4 4E-13 1.4E-17 127.2 9.3 96 121-228 194-290 (336)
185 2r3s_A Uncharacterized protein 99.4 2.9E-12 9.8E-17 121.0 14.7 105 121-227 164-269 (335)
186 3mcz_A O-methyltransferase; ad 99.4 2.5E-12 8.4E-17 122.4 13.9 111 114-227 170-285 (352)
187 1x19_A CRTF-related protein; m 99.4 3.7E-12 1.2E-16 121.6 15.1 111 113-227 181-293 (359)
188 1qzz_A RDMB, aclacinomycin-10- 99.4 3.5E-12 1.2E-16 122.3 14.9 111 114-228 174-286 (374)
189 2pbf_A Protein-L-isoaspartate 99.4 1.3E-12 4.5E-17 116.3 11.1 100 119-227 77-191 (227)
190 3dp7_A SAM-dependent methyltra 99.4 1.7E-12 5.8E-17 124.2 12.4 104 121-227 178-285 (363)
191 2pjd_A Ribosomal RNA small sub 99.4 8E-13 2.7E-17 125.5 10.0 110 114-227 188-301 (343)
192 1wy7_A Hypothetical protein PH 99.4 4.5E-12 1.5E-16 111.1 14.1 100 119-226 46-146 (207)
193 1jg1_A PIMT;, protein-L-isoasp 99.4 1.8E-12 6E-17 116.3 11.4 104 114-228 83-188 (235)
194 1inl_A Spermidine synthase; be 99.4 7.3E-13 2.5E-17 123.1 9.2 109 121-229 89-205 (296)
195 3tm4_A TRNA (guanine N2-)-meth 99.4 1.7E-12 5.7E-17 124.6 11.9 104 114-219 210-321 (373)
196 3gwz_A MMCR; methyltransferase 99.4 5.8E-12 2E-16 120.7 15.5 112 112-227 192-305 (369)
197 1xj5_A Spermidine synthase 1; 99.4 8.1E-13 2.8E-17 124.7 9.3 108 121-228 119-234 (334)
198 3i53_A O-methyltransferase; CO 99.4 3.3E-12 1.1E-16 120.5 13.4 105 120-228 167-273 (332)
199 3p2e_A 16S rRNA methylase; met 99.4 4.5E-13 1.5E-17 119.6 6.7 106 121-227 23-137 (225)
200 1mjf_A Spermidine synthase; sp 99.4 6E-13 2E-17 122.8 7.6 105 121-228 74-192 (281)
201 3cc8_A Putative methyltransfer 99.4 1.4E-12 4.9E-17 115.7 9.7 96 121-228 31-129 (230)
202 2pt6_A Spermidine synthase; tr 99.4 7.2E-13 2.5E-17 124.5 7.9 108 121-228 115-229 (321)
203 3hp7_A Hemolysin, putative; st 99.4 5.7E-13 2E-17 122.6 6.9 104 112-227 75-183 (291)
204 1zq9_A Probable dimethyladenos 99.4 8.8E-13 3E-17 121.9 8.1 84 112-198 18-102 (285)
205 1vlm_A SAM-dependent methyltra 99.4 2.2E-12 7.4E-17 114.3 10.3 90 122-227 47-137 (219)
206 4e2x_A TCAB9; kijanose, tetron 99.4 6.5E-13 2.2E-17 129.4 7.5 113 108-228 93-207 (416)
207 1tw3_A COMT, carminomycin 4-O- 99.4 6.4E-12 2.2E-16 119.9 14.2 109 115-227 176-286 (360)
208 2qm3_A Predicted methyltransfe 99.4 3.3E-12 1.1E-16 122.6 11.9 100 120-225 170-273 (373)
209 1iy9_A Spermidine synthase; ro 99.4 1.7E-12 5.8E-17 119.3 9.4 109 121-229 74-189 (275)
210 3bwc_A Spermidine synthase; SA 99.4 2.6E-12 9E-17 119.8 10.7 107 121-228 94-209 (304)
211 2b2c_A Spermidine synthase; be 99.3 7E-13 2.4E-17 124.1 6.5 109 121-229 107-222 (314)
212 1af7_A Chemotaxis receptor met 99.3 4.6E-12 1.6E-16 116.1 11.7 105 122-227 105-250 (274)
213 2bm8_A Cephalosporin hydroxyla 99.3 7.1E-13 2.4E-17 119.1 6.2 97 122-230 81-188 (236)
214 2ip2_A Probable phenazine-spec 99.3 4.9E-12 1.7E-16 119.5 11.8 106 118-228 164-271 (334)
215 1r18_A Protein-L-isoaspartate( 99.3 3.6E-12 1.2E-16 113.6 10.3 98 119-227 81-192 (227)
216 3gjy_A Spermidine synthase; AP 99.3 2.1E-12 7.3E-17 120.1 9.1 104 124-228 91-199 (317)
217 2o07_A Spermidine synthase; st 99.3 3.1E-12 1E-16 119.3 10.1 108 121-228 94-208 (304)
218 3adn_A Spermidine synthase; am 99.3 2E-12 6.8E-17 119.9 8.6 107 121-228 82-197 (294)
219 3q87_B N6 adenine specific DNA 99.3 2.1E-12 7.2E-17 110.0 8.0 92 121-227 22-121 (170)
220 1uir_A Polyamine aminopropyltr 99.3 2.4E-12 8E-17 120.7 8.8 108 121-228 76-194 (314)
221 2i7c_A Spermidine synthase; tr 99.3 8.6E-12 2.9E-16 115.1 10.4 108 121-229 77-192 (283)
222 1ne2_A Hypothetical protein TA 99.3 1.4E-11 4.7E-16 107.5 11.1 91 119-219 48-139 (200)
223 1ej0_A FTSJ; methyltransferase 99.3 6.2E-12 2.1E-16 106.6 8.6 99 118-227 18-134 (180)
224 3opn_A Putative hemolysin; str 99.3 8.4E-13 2.9E-17 118.3 3.1 104 112-227 27-135 (232)
225 1uwv_A 23S rRNA (uracil-5-)-me 99.3 2.3E-11 8E-16 118.9 13.5 113 106-227 270-387 (433)
226 3ldu_A Putative methylase; str 99.3 1.2E-11 4.1E-16 119.0 11.2 116 109-226 182-341 (385)
227 2plw_A Ribosomal RNA methyltra 99.3 1E-11 3.5E-16 108.2 9.8 97 120-227 20-152 (201)
228 1p91_A Ribosomal RNA large sub 99.3 9.9E-12 3.4E-16 113.5 9.9 91 121-227 84-176 (269)
229 3k0b_A Predicted N6-adenine-sp 99.3 1.4E-11 4.9E-16 118.6 11.0 116 109-226 188-347 (393)
230 2h1r_A Dimethyladenosine trans 99.3 1.3E-11 4.4E-16 114.8 10.3 81 114-198 34-115 (299)
231 2jjq_A Uncharacterized RNA met 99.3 4.4E-11 1.5E-15 116.4 14.5 108 107-228 278-386 (425)
232 3dou_A Ribosomal RNA large sub 99.3 7.9E-12 2.7E-16 108.6 8.2 97 118-226 21-136 (191)
233 3ldg_A Putative uncharacterize 99.3 2.5E-11 8.7E-16 116.4 12.5 117 108-226 180-340 (384)
234 3axs_A Probable N(2),N(2)-dime 99.3 8.1E-12 2.8E-16 119.8 8.7 100 121-227 51-156 (392)
235 3sso_A Methyltransferase; macr 99.2 1.3E-11 4.5E-16 117.4 9.0 94 121-228 215-323 (419)
236 4azs_A Methyltransferase WBDD; 99.2 5.2E-12 1.8E-16 127.8 6.7 101 121-226 65-170 (569)
237 2nyu_A Putative ribosomal RNA 99.2 1.8E-11 6E-16 106.2 9.2 97 119-227 19-143 (196)
238 2wa2_A Non-structural protein 99.2 2.1E-12 7.2E-17 118.6 2.4 107 116-227 76-191 (276)
239 3bt7_A TRNA (uracil-5-)-methyl 99.2 2.6E-11 8.9E-16 116.2 9.8 111 108-230 200-327 (369)
240 3frh_A 16S rRNA methylase; met 99.2 5.4E-11 1.8E-15 105.3 10.9 99 121-226 104-203 (253)
241 3giw_A Protein of unknown func 99.2 3.2E-11 1.1E-15 109.6 9.5 121 107-228 62-199 (277)
242 2oxt_A Nucleoside-2'-O-methylt 99.2 1.7E-12 5.8E-17 118.5 1.0 105 118-227 70-183 (265)
243 3lst_A CALO1 methyltransferase 99.2 2.2E-11 7.5E-16 115.8 8.3 109 113-227 175-284 (348)
244 3lcv_B Sisomicin-gentamicin re 99.2 2.6E-11 8.7E-16 108.4 7.7 112 108-226 120-233 (281)
245 4fzv_A Putative methyltransfer 99.2 4.2E-11 1.4E-15 113.5 9.7 116 118-233 144-288 (359)
246 2dul_A N(2),N(2)-dimethylguano 99.2 2.2E-11 7.6E-16 116.7 7.9 98 122-227 47-162 (378)
247 2p41_A Type II methyltransfera 99.2 7.4E-12 2.5E-16 116.7 4.2 103 118-227 78-189 (305)
248 2cmg_A Spermidine synthase; tr 99.2 6.9E-12 2.3E-16 114.4 3.1 95 121-227 71-169 (262)
249 2qfm_A Spermine synthase; sper 99.2 4.9E-11 1.7E-15 112.3 8.6 121 109-229 174-314 (364)
250 2f8l_A Hypothetical protein LM 99.1 1.5E-10 5.2E-15 109.7 11.1 105 120-227 128-254 (344)
251 3gru_A Dimethyladenosine trans 99.1 1.4E-10 4.7E-15 107.3 10.4 84 111-198 39-123 (295)
252 1qam_A ERMC' methyltransferase 99.1 2.6E-10 8.9E-15 102.8 11.5 84 110-198 18-103 (244)
253 2zfu_A Nucleomethylin, cerebra 99.1 6.3E-11 2.2E-15 104.4 7.1 86 120-228 65-150 (215)
254 3reo_A (ISO)eugenol O-methyltr 99.1 2.5E-10 8.7E-15 109.2 11.0 97 120-228 201-299 (368)
255 1fp1_D Isoliquiritigenin 2'-O- 99.1 2.4E-10 8.3E-15 109.5 10.3 102 113-228 199-305 (372)
256 2ih2_A Modification methylase 99.1 2.1E-10 7.1E-15 111.6 9.8 102 114-227 31-162 (421)
257 3p9c_A Caffeic acid O-methyltr 99.1 3.8E-10 1.3E-14 107.8 10.9 97 120-228 199-297 (364)
258 1yub_A Ermam, rRNA methyltrans 99.1 7.1E-12 2.4E-16 113.2 -1.2 107 114-227 21-143 (245)
259 2okc_A Type I restriction enzy 99.1 1.9E-10 6.6E-15 112.8 8.7 114 111-226 160-304 (445)
260 3fut_A Dimethyladenosine trans 99.1 4.4E-10 1.5E-14 102.6 10.4 95 112-214 37-133 (271)
261 3tqs_A Ribosomal RNA small sub 99.0 3.4E-10 1.2E-14 102.6 8.5 85 112-202 19-108 (255)
262 2ld4_A Anamorsin; methyltransf 99.0 1E-10 3.4E-15 99.8 4.7 88 118-227 8-99 (176)
263 4a6d_A Hydroxyindole O-methylt 99.0 1.3E-09 4.4E-14 103.7 12.3 111 113-227 170-281 (353)
264 3v97_A Ribosomal RNA large sub 99.0 1.1E-09 3.9E-14 112.9 11.8 117 109-226 177-344 (703)
265 2xyq_A Putative 2'-O-methyl tr 99.0 6.7E-10 2.3E-14 102.3 8.9 105 107-227 47-169 (290)
266 1fp2_A Isoflavone O-methyltran 99.0 4.8E-10 1.6E-14 106.6 8.2 97 120-228 186-287 (352)
267 3cvo_A Methyltransferase-like 99.0 6.2E-09 2.1E-13 90.4 12.9 97 122-228 30-153 (202)
268 1m6y_A S-adenosyl-methyltransf 98.9 8.6E-10 2.9E-14 102.2 7.0 78 118-197 22-106 (301)
269 3ll7_A Putative methyltransfer 98.9 8.1E-10 2.8E-14 106.2 5.8 75 122-198 93-172 (410)
270 3uzu_A Ribosomal RNA small sub 98.9 4E-09 1.4E-13 96.7 8.7 82 112-198 32-123 (279)
271 2r6z_A UPF0341 protein in RSP 98.9 5.1E-10 1.8E-14 101.6 2.6 79 119-198 80-170 (258)
272 1zg3_A Isoflavanone 4'-O-methy 98.9 3.8E-09 1.3E-13 100.6 8.4 96 121-227 192-291 (358)
273 3ftd_A Dimethyladenosine trans 98.9 3.3E-09 1.1E-13 95.8 7.5 85 111-202 20-107 (249)
274 2oyr_A UPF0341 protein YHIQ; a 98.8 4.7E-09 1.6E-13 95.0 6.6 83 114-198 78-173 (258)
275 2ar0_A M.ecoki, type I restric 98.8 7.5E-09 2.6E-13 103.7 8.5 113 113-226 160-309 (541)
276 1qyr_A KSGA, high level kasuga 98.8 3.2E-09 1.1E-13 96.0 4.5 84 112-202 11-102 (252)
277 3o4f_A Spermidine synthase; am 98.7 2.9E-08 1E-12 90.9 8.7 107 121-227 82-196 (294)
278 3evf_A RNA-directed RNA polyme 98.6 3.4E-08 1.2E-12 88.8 6.8 105 118-227 70-182 (277)
279 3khk_A Type I restriction-modi 98.6 3.3E-08 1.1E-12 98.9 7.4 112 113-226 236-392 (544)
280 3lkd_A Type I restriction-modi 98.6 1.2E-07 4.1E-12 94.7 11.2 106 120-226 219-355 (542)
281 4auk_A Ribosomal RNA large sub 98.6 1E-07 3.5E-12 89.6 8.4 71 120-198 209-279 (375)
282 2wk1_A NOVP; transferase, O-me 98.6 5.3E-07 1.8E-11 82.4 12.8 119 107-230 91-245 (282)
283 3gcz_A Polyprotein; flavivirus 98.5 3.9E-08 1.3E-12 88.6 2.3 104 118-226 86-198 (282)
284 3c6k_A Spermine synthase; sper 98.4 2.7E-07 9.1E-12 87.2 6.8 119 109-227 191-329 (381)
285 3s1s_A Restriction endonucleas 98.4 5.7E-07 2E-11 92.1 8.0 105 121-226 320-462 (878)
286 2qy6_A UPF0209 protein YFCK; s 98.4 8.2E-07 2.8E-11 80.3 8.2 106 121-227 59-211 (257)
287 3p8z_A Mtase, non-structural p 98.3 4.4E-07 1.5E-11 79.1 4.9 104 118-226 74-183 (267)
288 3eld_A Methyltransferase; flav 98.3 3E-07 1E-11 83.4 3.7 109 112-226 72-188 (300)
289 1wg8_A Predicted S-adenosylmet 98.3 1.6E-06 5.4E-11 78.5 7.8 75 117-197 17-97 (285)
290 2k4m_A TR8_protein, UPF0146 pr 98.2 2.5E-06 8.5E-11 69.2 6.4 69 109-196 24-96 (153)
291 3lkz_A Non-structural protein 98.2 8.6E-06 2.9E-10 73.4 9.8 105 116-226 88-201 (321)
292 2px2_A Genome polyprotein [con 98.2 8.1E-06 2.8E-10 72.4 9.5 98 118-226 69-180 (269)
293 3b5i_A S-adenosyl-L-methionine 98.1 5E-05 1.7E-09 72.1 13.8 105 123-227 53-223 (374)
294 3ufb_A Type I restriction-modi 98.0 1.6E-05 5.5E-10 79.3 10.2 87 111-198 206-311 (530)
295 2zig_A TTHA0409, putative modi 97.9 3.3E-05 1.1E-09 71.3 8.8 47 121-168 234-281 (297)
296 3r24_A NSP16, 2'-O-methyl tran 97.8 0.00012 4.1E-09 66.0 9.9 106 106-226 92-214 (344)
297 2efj_A 3,7-dimethylxanthine me 97.8 6.9E-05 2.4E-09 71.2 8.7 102 123-227 53-223 (384)
298 3tka_A Ribosomal RNA small sub 97.4 0.00027 9.1E-09 65.5 7.3 79 114-197 49-136 (347)
299 1g60_A Adenine-specific methyl 97.4 0.00026 8.8E-09 63.9 6.9 48 121-169 211-259 (260)
300 1m6e_X S-adenosyl-L-methionnin 97.4 0.00012 4.1E-09 69.0 4.8 106 122-227 51-207 (359)
301 1i4w_A Mitochondrial replicati 97.3 0.00042 1.4E-08 65.1 7.6 78 99-184 33-118 (353)
302 2oo3_A Protein involved in cat 97.3 0.00011 3.7E-09 66.5 2.9 107 109-226 82-195 (283)
303 3g7u_A Cytosine-specific methy 97.2 0.00092 3.2E-08 63.6 9.3 74 124-203 3-85 (376)
304 2c7p_A Modification methylase 97.0 0.00094 3.2E-08 62.3 7.0 74 122-203 10-85 (327)
305 1g55_A DNA cytosine methyltran 96.9 0.00044 1.5E-08 65.0 3.5 73 124-202 3-81 (343)
306 1rjd_A PPM1P, carboxy methyl t 96.8 0.0098 3.3E-07 55.5 11.4 120 105-226 80-229 (334)
307 1f8f_A Benzyl alcohol dehydrog 96.6 0.0093 3.2E-07 56.4 10.2 98 114-227 182-287 (371)
308 2py6_A Methyltransferase FKBM; 96.3 0.0096 3.3E-07 57.2 8.4 63 120-182 224-293 (409)
309 3qv2_A 5-cytosine DNA methyltr 96.2 0.0074 2.5E-07 56.2 6.7 73 123-202 10-89 (327)
310 2dph_A Formaldehyde dismutase; 96.2 0.009 3.1E-07 57.1 7.4 102 117-227 180-297 (398)
311 2qrv_A DNA (cytosine-5)-methyl 96.1 0.012 4E-07 53.9 7.5 77 121-203 14-97 (295)
312 3ubt_Y Modification methylase 96.1 0.0081 2.8E-07 55.8 6.5 72 124-202 1-74 (331)
313 4ej6_A Putative zinc-binding d 96.1 0.0075 2.6E-07 57.1 6.1 98 117-227 177-282 (370)
314 2uyo_A Hypothetical protein ML 96.1 0.064 2.2E-06 49.4 12.2 122 105-229 86-218 (310)
315 3fpc_A NADP-dependent alcohol 95.9 0.017 6E-07 54.0 8.0 96 116-227 160-264 (352)
316 3tos_A CALS11; methyltransfera 95.9 0.023 7.7E-07 50.8 7.9 104 121-230 69-218 (257)
317 4h0n_A DNMT2; SAH binding, tra 95.8 0.0066 2.3E-07 56.6 4.5 73 124-202 4-82 (333)
318 3s2e_A Zinc-containing alcohol 95.7 0.014 4.8E-07 54.4 6.4 94 117-227 161-261 (340)
319 1pl8_A Human sorbitol dehydrog 95.7 0.014 5E-07 54.7 6.5 95 117-227 166-271 (356)
320 3uog_A Alcohol dehydrogenase; 95.7 0.02 7E-07 53.9 7.5 97 113-227 180-285 (363)
321 3m6i_A L-arabinitol 4-dehydrog 95.7 0.021 7.1E-07 53.7 7.5 97 117-227 174-281 (363)
322 3ip1_A Alcohol dehydrogenase, 95.7 0.039 1.3E-06 52.7 9.3 97 119-227 210-316 (404)
323 3two_A Mannitol dehydrogenase; 95.6 0.035 1.2E-06 51.8 8.8 89 118-227 172-263 (348)
324 1kol_A Formaldehyde dehydrogen 95.6 0.018 6.3E-07 54.8 6.8 101 118-227 181-298 (398)
325 1pqw_A Polyketide synthase; ro 95.4 0.02 6.9E-07 48.7 5.8 94 114-227 30-135 (198)
326 3vyw_A MNMC2; tRNA wobble urid 95.4 0.068 2.3E-06 48.9 9.5 105 122-226 96-223 (308)
327 3goh_A Alcohol dehydrogenase, 95.4 0.026 8.9E-07 51.9 6.8 89 116-227 136-227 (315)
328 2vz8_A Fatty acid synthase; tr 95.4 0.0034 1.2E-07 73.3 0.9 101 121-228 1239-1347(2512)
329 1boo_A Protein (N-4 cytosine-s 95.3 0.0029 9.8E-08 58.9 0.1 62 120-184 250-312 (323)
330 3uko_A Alcohol dehydrogenase c 95.3 0.038 1.3E-06 52.2 7.9 98 114-227 185-293 (378)
331 3me5_A Cytosine-specific methy 95.3 0.022 7.7E-07 55.7 6.2 78 123-203 88-183 (482)
332 1p0f_A NADP-dependent alcohol 95.2 0.024 8.3E-07 53.5 6.0 96 116-227 185-291 (373)
333 1cdo_A Alcohol dehydrogenase; 95.1 0.027 9.4E-07 53.1 6.2 96 116-227 186-292 (374)
334 2fzw_A Alcohol dehydrogenase c 95.0 0.092 3.1E-06 49.4 9.5 96 116-227 184-290 (373)
335 1e3i_A Alcohol dehydrogenase, 95.0 0.031 1E-06 52.9 6.1 96 116-227 189-295 (376)
336 1uuf_A YAHK, zinc-type alcohol 95.0 0.036 1.2E-06 52.3 6.6 92 118-227 190-286 (369)
337 3jv7_A ADH-A; dehydrogenase, n 95.0 0.04 1.4E-06 51.4 6.8 93 119-227 168-268 (345)
338 3gms_A Putative NADPH:quinone 94.9 0.095 3.3E-06 48.7 9.0 96 114-227 136-241 (340)
339 4dvj_A Putative zinc-dependent 94.8 0.041 1.4E-06 51.8 6.5 90 122-227 171-268 (363)
340 1e3j_A NADP(H)-dependent ketos 94.8 0.048 1.7E-06 51.0 6.9 94 117-227 163-269 (352)
341 2jhf_A Alcohol dehydrogenase E 94.8 0.097 3.3E-06 49.3 8.9 96 116-227 185-291 (374)
342 1v3u_A Leukotriene B4 12- hydr 94.6 0.038 1.3E-06 51.2 5.6 97 114-227 137-242 (333)
343 4b7c_A Probable oxidoreductase 94.6 0.081 2.8E-06 49.0 7.8 98 113-227 140-246 (336)
344 2zig_A TTHA0409, putative modi 94.6 0.029 9.9E-07 51.3 4.6 60 171-231 20-99 (297)
345 4a2c_A Galactitol-1-phosphate 94.6 0.059 2E-06 50.1 6.8 98 117-227 155-258 (346)
346 3jyn_A Quinone oxidoreductase; 94.5 0.1 3.5E-06 48.1 8.3 96 114-227 132-237 (325)
347 1vj0_A Alcohol dehydrogenase, 94.5 0.1 3.6E-06 49.3 8.3 94 118-227 190-296 (380)
348 2d8a_A PH0655, probable L-thre 94.4 0.12 4.3E-06 48.0 8.7 94 117-227 163-265 (348)
349 3qwb_A Probable quinone oxidor 94.4 0.1 3.4E-06 48.3 8.0 95 115-227 141-245 (334)
350 2h6e_A ADH-4, D-arabinose 1-de 94.3 0.032 1.1E-06 52.0 4.4 90 119-227 168-267 (344)
351 4eez_A Alcohol dehydrogenase 1 94.3 0.15 5.1E-06 47.3 9.0 98 118-228 159-262 (348)
352 1iz0_A Quinone oxidoreductase; 94.2 0.028 9.7E-07 51.3 3.7 89 120-227 123-216 (302)
353 4eye_A Probable oxidoreductase 94.2 0.11 3.7E-06 48.4 7.6 96 113-227 150-255 (342)
354 3pvc_A TRNA 5-methylaminomethy 94.1 0.073 2.5E-06 54.6 7.0 108 122-229 58-211 (689)
355 2eih_A Alcohol dehydrogenase; 94.1 0.12 4.2E-06 48.0 8.0 92 118-227 162-263 (343)
356 2c0c_A Zinc binding alcohol de 94.0 0.066 2.3E-06 50.3 6.0 93 117-227 158-259 (362)
357 3fbg_A Putative arginate lyase 93.9 0.072 2.5E-06 49.7 6.0 89 122-227 150-246 (346)
358 2j3h_A NADP-dependent oxidored 93.8 0.13 4.5E-06 47.7 7.5 98 114-227 147-253 (345)
359 1qor_A Quinone oxidoreductase; 93.6 0.18 6.2E-06 46.4 8.0 93 117-227 135-237 (327)
360 2dq4_A L-threonine 3-dehydroge 93.5 0.013 4.3E-07 54.8 -0.1 93 117-227 160-260 (343)
361 1piw_A Hypothetical zinc-type 93.5 0.12 3.9E-06 48.5 6.6 94 118-227 175-274 (360)
362 3krt_A Crotonyl COA reductase; 93.5 0.26 8.7E-06 47.8 9.2 95 118-227 224-342 (456)
363 1boo_A Protein (N-4 cytosine-s 93.5 0.083 2.8E-06 48.9 5.4 59 171-230 13-85 (323)
364 1rjw_A ADH-HT, alcohol dehydro 93.4 0.094 3.2E-06 48.7 5.6 91 119-227 161-259 (339)
365 3tqh_A Quinone oxidoreductase; 93.3 0.38 1.3E-05 44.1 9.6 94 116-227 146-243 (321)
366 2hcy_A Alcohol dehydrogenase 1 93.3 0.11 3.9E-06 48.2 6.1 93 118-227 165-267 (347)
367 1yb5_A Quinone oxidoreductase; 93.2 0.27 9.1E-06 45.9 8.6 96 114-227 162-267 (351)
368 1wly_A CAAR, 2-haloacrylate re 93.0 0.098 3.3E-06 48.4 5.1 96 114-227 137-242 (333)
369 2zb4_A Prostaglandin reductase 92.8 0.084 2.9E-06 49.4 4.4 96 116-227 152-258 (357)
370 3nx4_A Putative oxidoreductase 92.7 0.12 4.1E-06 47.5 5.3 87 123-227 148-239 (324)
371 3swr_A DNA (cytosine-5)-methyl 92.7 0.29 1E-05 52.0 8.7 75 123-203 540-632 (1002)
372 1jvb_A NAD(H)-dependent alcoho 92.6 0.38 1.3E-05 44.6 8.7 93 118-227 166-269 (347)
373 2vn8_A Reticulon-4-interacting 92.6 0.11 3.8E-06 48.9 5.0 91 120-227 181-278 (375)
374 4dup_A Quinone oxidoreductase; 92.1 0.1 3.4E-06 48.8 4.0 96 114-227 159-263 (353)
375 4dcm_A Ribosomal RNA large sub 92.1 0.85 2.9E-05 43.0 10.4 94 122-226 38-133 (375)
376 2j8z_A Quinone oxidoreductase; 92.0 0.4 1.4E-05 44.7 8.0 94 116-227 156-259 (354)
377 3ps9_A TRNA 5-methylaminomethy 92.0 0.46 1.6E-05 48.4 9.0 108 122-229 66-219 (676)
378 4ft4_B DNA (cytosine-5)-methyl 91.8 0.38 1.3E-05 50.0 8.3 42 123-164 212-260 (784)
379 1eg2_A Modification methylase 91.6 0.26 8.8E-06 45.5 6.0 48 120-168 240-291 (319)
380 3gaz_A Alcohol dehydrogenase s 91.5 0.65 2.2E-05 43.0 8.8 93 114-227 142-244 (343)
381 1eg2_A Modification methylase 91.4 0.17 5.8E-06 46.7 4.6 57 171-228 37-105 (319)
382 3ius_A Uncharacterized conserv 91.3 1.7 5.7E-05 38.6 11.1 96 124-233 6-107 (286)
383 3pxx_A Carveol dehydrogenase; 91.3 1.4 4.9E-05 39.1 10.7 102 121-226 8-150 (287)
384 2cf5_A Atccad5, CAD, cinnamyl 91.1 0.17 5.7E-06 47.4 4.3 94 118-227 175-273 (357)
385 1gu7_A Enoyl-[acyl-carrier-pro 91.1 0.29 9.8E-06 45.8 6.0 100 114-227 158-273 (364)
386 3iei_A Leucine carboxyl methyl 91.0 3.4 0.00011 38.2 13.0 120 105-226 72-226 (334)
387 2b5w_A Glucose dehydrogenase; 90.9 0.4 1.4E-05 44.7 6.7 95 118-227 162-271 (357)
388 1zsy_A Mitochondrial 2-enoyl t 90.8 0.47 1.6E-05 44.2 7.1 100 114-227 159-268 (357)
389 3fwz_A Inner membrane protein 90.7 0.85 2.9E-05 36.1 7.6 88 124-226 8-102 (140)
390 4eso_A Putative oxidoreductase 90.5 1 3.5E-05 39.6 8.8 99 121-226 6-135 (255)
391 4fgs_A Probable dehydrogenase 90.5 0.66 2.2E-05 41.7 7.4 99 121-226 27-156 (273)
392 3oig_A Enoyl-[acyl-carrier-pro 90.4 1.7 5.9E-05 38.2 10.3 104 121-226 5-144 (266)
393 4dkj_A Cytosine-specific methy 90.2 0.28 9.6E-06 46.7 5.0 42 124-165 11-59 (403)
394 3ado_A Lambda-crystallin; L-gu 90.1 0.73 2.5E-05 42.4 7.6 102 123-233 6-127 (319)
395 1xa0_A Putative NADPH dependen 90.1 0.2 6.9E-06 46.1 3.9 94 119-227 145-244 (328)
396 3av4_A DNA (cytosine-5)-methyl 90.0 0.91 3.1E-05 49.6 9.2 77 122-204 850-944 (1330)
397 4a0s_A Octenoyl-COA reductase/ 89.8 0.46 1.6E-05 45.8 6.3 95 118-227 216-334 (447)
398 1g60_A Adenine-specific methyl 89.8 0.24 8.2E-06 44.1 3.9 55 173-228 5-73 (260)
399 3ijr_A Oxidoreductase, short c 89.6 1.6 5.6E-05 39.2 9.5 103 121-226 45-179 (291)
400 3grk_A Enoyl-(acyl-carrier-pro 89.6 3.3 0.00011 37.2 11.6 73 121-197 29-117 (293)
401 1yqd_A Sinapyl alcohol dehydro 89.5 0.37 1.3E-05 45.2 5.2 93 119-227 183-280 (366)
402 3v2g_A 3-oxoacyl-[acyl-carrier 89.4 1.7 5.9E-05 38.6 9.4 102 121-226 29-162 (271)
403 1tt7_A YHFP; alcohol dehydroge 89.2 0.25 8.7E-06 45.4 3.8 91 119-227 146-245 (330)
404 4fn4_A Short chain dehydrogena 89.2 1.2 4E-05 39.5 8.0 74 121-197 5-92 (254)
405 4g81_D Putative hexonate dehyd 89.0 0.7 2.4E-05 41.1 6.3 74 121-197 7-94 (255)
406 3is3_A 17BETA-hydroxysteroid d 88.7 1.3 4.6E-05 39.2 8.2 103 121-227 16-150 (270)
407 1pjc_A Protein (L-alanine dehy 88.7 0.16 5.6E-06 47.7 2.1 97 122-227 166-265 (361)
408 3ek2_A Enoyl-(acyl-carrier-pro 88.5 2.2 7.5E-05 37.5 9.5 75 119-197 10-100 (271)
409 1wma_A Carbonyl reductase [NAD 88.2 1.3 4.4E-05 38.9 7.7 72 122-197 3-90 (276)
410 3r3s_A Oxidoreductase; structu 88.0 2.2 7.6E-05 38.3 9.2 104 121-227 47-183 (294)
411 3edm_A Short chain dehydrogena 87.8 1.2 4.2E-05 39.2 7.2 74 121-197 6-94 (259)
412 1e7w_A Pteridine reductase; di 87.8 4.3 0.00015 36.3 11.1 60 121-184 7-73 (291)
413 3k31_A Enoyl-(acyl-carrier-pro 87.7 3 0.0001 37.5 10.0 73 121-197 28-116 (296)
414 1zcj_A Peroxisomal bifunctiona 87.5 3 0.0001 40.4 10.3 97 124-230 38-151 (463)
415 2dpo_A L-gulonate 3-dehydrogen 87.4 4.4 0.00015 37.1 10.8 96 124-228 7-122 (319)
416 3l9w_A Glutathione-regulated p 87.2 1.1 3.9E-05 42.7 7.0 87 123-226 4-99 (413)
417 2vhw_A Alanine dehydrogenase; 87.1 0.18 6.3E-06 47.6 1.4 98 121-227 166-266 (377)
418 3u5t_A 3-oxoacyl-[acyl-carrier 87.1 2 6.9E-05 38.1 8.3 74 121-197 25-113 (267)
419 3ggo_A Prephenate dehydrogenas 86.9 2.1 7E-05 39.2 8.4 88 123-226 33-125 (314)
420 2cdc_A Glucose dehydrogenase g 86.8 1.4 4.9E-05 41.0 7.4 83 123-227 181-276 (366)
421 3jyo_A Quinate/shikimate dehyd 86.5 0.75 2.6E-05 41.5 5.1 87 109-197 113-202 (283)
422 3ce6_A Adenosylhomocysteinase; 86.5 1.7 5.7E-05 42.5 7.8 85 120-226 271-358 (494)
423 3ksu_A 3-oxoacyl-acyl carrier 85.7 2.7 9.4E-05 37.0 8.4 73 121-197 9-99 (262)
424 3gqv_A Enoyl reductase; medium 85.5 0.85 2.9E-05 42.7 5.1 89 121-227 163-261 (371)
425 3h7a_A Short chain dehydrogena 85.5 1.9 6.4E-05 37.8 7.1 74 121-197 5-91 (252)
426 3c85_A Putative glutathione-re 85.4 2.3 7.7E-05 35.1 7.2 90 122-226 38-136 (183)
427 3o8q_A Shikimate 5-dehydrogena 84.9 5 0.00017 36.0 9.7 80 110-197 113-195 (281)
428 3ucx_A Short chain dehydrogena 84.8 3.2 0.00011 36.5 8.4 74 121-197 9-96 (264)
429 3zwc_A Peroxisomal bifunctiona 84.7 5.7 0.0002 40.8 11.1 101 124-234 317-434 (742)
430 3qiv_A Short-chain dehydrogena 84.7 2.9 9.9E-05 36.4 8.0 74 121-197 7-94 (253)
431 3rku_A Oxidoreductase YMR226C; 84.6 3 0.0001 37.4 8.2 75 122-197 32-123 (287)
432 4a27_A Synaptic vesicle membra 84.5 0.48 1.6E-05 44.0 2.8 95 114-227 134-236 (349)
433 3llv_A Exopolyphosphatase-rela 84.4 2.1 7.1E-05 33.6 6.3 63 123-196 6-77 (141)
434 1f0y_A HCDH, L-3-hydroxyacyl-C 84.3 4.4 0.00015 36.5 9.2 96 124-228 16-135 (302)
435 1xg5_A ARPG836; short chain de 84.3 3.3 0.00011 36.6 8.3 74 122-197 31-119 (279)
436 4e12_A Diketoreductase; oxidor 84.2 4.4 0.00015 36.2 9.1 97 124-229 5-121 (283)
437 3ioy_A Short-chain dehydrogena 84.0 3 0.0001 38.1 8.0 76 121-197 6-95 (319)
438 1g0o_A Trihydroxynaphthalene r 83.8 4.1 0.00014 36.2 8.7 73 121-197 27-115 (283)
439 3k6j_A Protein F01G10.3, confi 83.6 4.7 0.00016 39.0 9.4 98 124-231 55-168 (460)
440 3gaf_A 7-alpha-hydroxysteroid 83.4 3.1 0.0001 36.5 7.6 74 121-197 10-97 (256)
441 2eez_A Alanine dehydrogenase; 83.3 0.71 2.4E-05 43.3 3.4 96 121-227 164-264 (369)
442 3rkr_A Short chain oxidoreduct 83.2 3.4 0.00012 36.2 7.8 74 120-197 26-114 (262)
443 3tjr_A Short chain dehydrogena 83.1 3.6 0.00012 37.1 8.1 74 121-197 29-116 (301)
444 1zkd_A DUF185; NESG, RPR58, st 82.6 4.3 0.00015 38.2 8.5 68 122-196 80-156 (387)
445 3tfo_A Putative 3-oxoacyl-(acy 82.4 3.5 0.00012 36.5 7.5 73 122-197 3-89 (264)
446 3p2y_A Alanine dehydrogenase/p 82.4 0.37 1.3E-05 45.4 1.1 40 122-162 183-225 (381)
447 3v8b_A Putative dehydrogenase, 82.2 3.1 0.0001 37.2 7.2 74 121-197 26-113 (283)
448 1h2b_A Alcohol dehydrogenase; 82.0 2.3 7.8E-05 39.5 6.4 44 118-162 182-229 (359)
449 4dio_A NAD(P) transhydrogenase 81.9 0.46 1.6E-05 45.2 1.5 40 122-162 189-231 (405)
450 3o38_A Short chain dehydrogena 81.5 3.9 0.00013 35.9 7.5 75 121-197 20-109 (266)
451 3lyl_A 3-oxoacyl-(acyl-carrier 81.3 4.2 0.00014 35.1 7.6 73 122-197 4-90 (247)
452 1yb1_A 17-beta-hydroxysteroid 80.9 6 0.0002 34.9 8.6 74 120-197 28-116 (272)
453 3mog_A Probable 3-hydroxybutyr 80.9 8.8 0.0003 37.3 10.3 99 124-232 6-123 (483)
454 3sju_A Keto reductase; short-c 80.9 3.8 0.00013 36.4 7.3 73 122-197 23-109 (279)
455 3ond_A Adenosylhomocysteinase; 80.7 3.2 0.00011 40.4 7.0 82 121-226 263-349 (488)
456 1lss_A TRK system potassium up 80.7 12 0.00041 28.6 9.5 87 123-226 4-99 (140)
457 4hp8_A 2-deoxy-D-gluconate 3-d 80.6 6.1 0.00021 34.7 8.3 73 121-197 7-87 (247)
458 2qhx_A Pteridine reductase 1; 80.5 6.4 0.00022 35.9 8.9 59 122-184 45-110 (328)
459 3f9i_A 3-oxoacyl-[acyl-carrier 80.1 4 0.00014 35.3 7.1 73 119-197 10-92 (249)
460 3lf2_A Short chain oxidoreduct 80.1 5.5 0.00019 35.0 8.0 75 121-197 6-95 (265)
461 3nyw_A Putative oxidoreductase 80.0 4.8 0.00016 35.1 7.5 76 121-197 5-95 (250)
462 3t7c_A Carveol dehydrogenase; 79.8 5.6 0.00019 35.7 8.1 74 121-197 26-125 (299)
463 2ew2_A 2-dehydropantoate 2-red 79.6 11 0.00039 33.5 10.2 89 124-227 4-106 (316)
464 3awd_A GOX2181, putative polyo 79.6 6 0.0002 34.3 8.1 73 121-197 11-98 (260)
465 3n58_A Adenosylhomocysteinase; 79.6 9.4 0.00032 36.6 9.7 85 120-226 244-331 (464)
466 3t4x_A Oxidoreductase, short c 79.3 4.7 0.00016 35.5 7.3 76 121-197 8-93 (267)
467 2jah_A Clavulanic acid dehydro 79.3 6.4 0.00022 34.1 8.1 74 121-197 5-92 (247)
468 3pwz_A Shikimate dehydrogenase 79.3 7.3 0.00025 34.7 8.5 70 120-197 117-189 (272)
469 3r1i_A Short-chain type dehydr 79.3 3.6 0.00012 36.5 6.6 74 121-197 30-117 (276)
470 3imf_A Short chain dehydrogena 79.2 2.9 9.8E-05 36.7 5.8 74 121-197 4-91 (257)
471 3sx2_A Putative 3-ketoacyl-(ac 79.2 5.6 0.00019 35.1 7.8 74 121-197 11-110 (278)
472 3rd5_A Mypaa.01249.C; ssgcid, 79.0 4 0.00014 36.4 6.8 71 121-197 14-94 (291)
473 1id1_A Putative potassium chan 79.0 5.2 0.00018 31.8 6.9 90 123-226 3-102 (153)
474 3tnl_A Shikimate dehydrogenase 78.8 4.9 0.00017 36.8 7.3 86 109-197 140-234 (315)
475 3svt_A Short-chain type dehydr 78.8 5.7 0.00019 35.2 7.7 76 121-197 9-99 (281)
476 1qsg_A Enoyl-[acyl-carrier-pro 78.7 14 0.00048 32.2 10.2 73 121-197 7-95 (265)
477 2vz8_A Fatty acid synthase; tr 78.6 1.4 4.8E-05 51.7 4.4 101 116-227 1661-1768(2512)
478 3o26_A Salutaridine reductase; 78.5 4.4 0.00015 36.1 7.0 75 121-197 10-99 (311)
479 3h8v_A Ubiquitin-like modifier 78.5 4.4 0.00015 36.6 6.8 60 122-181 35-115 (292)
480 4imr_A 3-oxoacyl-(acyl-carrier 78.4 3.5 0.00012 36.6 6.2 74 121-197 31-117 (275)
481 1iy8_A Levodione reductase; ox 78.4 6.7 0.00023 34.4 8.0 76 121-197 11-100 (267)
482 3t4e_A Quinate/shikimate dehyd 78.0 2 7E-05 39.2 4.5 46 109-154 134-181 (312)
483 2ae2_A Protein (tropinone redu 78.0 7.1 0.00024 34.0 8.0 73 121-197 7-95 (260)
484 2y0c_A BCEC, UDP-glucose dehyd 77.8 5 0.00017 39.0 7.5 102 122-228 7-127 (478)
485 2rhc_B Actinorhodin polyketide 77.8 7.1 0.00024 34.5 8.0 73 121-197 20-107 (277)
486 4dry_A 3-oxoacyl-[acyl-carrier 77.8 3.8 0.00013 36.5 6.2 75 121-197 31-119 (281)
487 1ae1_A Tropinone reductase-I; 77.7 7.3 0.00025 34.3 8.1 74 121-197 19-107 (273)
488 3uve_A Carveol dehydrogenase ( 77.5 6.1 0.00021 35.1 7.5 74 121-197 9-112 (286)
489 3pgx_A Carveol dehydrogenase; 77.5 6.1 0.00021 34.9 7.5 75 120-197 12-113 (280)
490 3h5n_A MCCB protein; ubiquitin 77.4 7 0.00024 36.3 8.1 74 122-195 117-214 (353)
491 1zej_A HBD-9, 3-hydroxyacyl-CO 77.4 6.8 0.00023 35.3 7.8 96 122-231 11-109 (293)
492 4f3n_A Uncharacterized ACR, CO 77.3 7.9 0.00027 37.0 8.5 55 123-177 138-201 (432)
493 4egf_A L-xylulose reductase; s 77.0 5.8 0.0002 34.9 7.2 74 121-197 18-106 (266)
494 3pk0_A Short-chain dehydrogena 77.0 5.2 0.00018 35.1 6.9 75 121-197 8-96 (262)
495 3pi7_A NADH oxidoreductase; gr 77.0 2.6 9E-05 38.8 5.1 89 121-227 162-261 (349)
496 3gvp_A Adenosylhomocysteinase 77.0 4.4 0.00015 38.7 6.6 85 120-226 217-304 (435)
497 3tsc_A Putative oxidoreductase 76.9 7.8 0.00027 34.2 8.1 74 121-197 9-109 (277)
498 1zem_A Xylitol dehydrogenase; 76.9 6.7 0.00023 34.3 7.6 74 121-197 5-92 (262)
499 2f1k_A Prephenate dehydrogenas 76.8 9 0.00031 33.8 8.4 84 125-226 2-88 (279)
500 4ibo_A Gluconate dehydrogenase 76.7 3.4 0.00012 36.6 5.6 74 121-197 24-111 (271)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=2.4e-55 Score=420.11 Aligned_cols=292 Identities=40% Similarity=0.745 Sum_probs=259.8
Q ss_pred cchhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHH
Q 016992 83 SADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQ 162 (379)
Q Consensus 83 ~~~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~ 162 (379)
.+..||++|++++.|..||+|..|+.+|.++|.++....+|++|||||||+|++++++|++|+++|+|||.|+|++.|++
T Consensus 44 ~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~ 123 (376)
T 4hc4_A 44 RDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQARE 123 (376)
T ss_dssp -----CCCHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHH
T ss_pred chhhhhhhccCcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHH
Confidence 44689999999999999999999999999999987777899999999999999999999999999999999888899999
Q ss_pred HHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeecccc
Q 016992 163 IVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEY 242 (379)
Q Consensus 163 ~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~ 242 (379)
+++.||+.++|+++++|++++.++ ++||+|||+++++++.++.+++.++.++.++|||||.++|+.+++|++++++..+
T Consensus 124 ~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~apie~~~l 202 (376)
T 4hc4_A 124 VVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPISDQML 202 (376)
T ss_dssp HHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHH
T ss_pred HHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccceEEEEEeccchh
Confidence 999999999999999999999888 8999999999999999999999999999999999999999999999999998544
Q ss_pred ccccccccccc---ccccchhhhhhhc------cCceEEeeCCCcccCCCeeeEeeeCCCCCCCC---ce----Ee----
Q 016992 243 KDDKIEFWNNV---YGFDMSCIKKQAM------MEPLVDTVDQNQIVTNCQLLKTMDISKMGPGD---AS----FT---- 302 (379)
Q Consensus 243 ~~~~~~~w~~~---~g~~~~~~~~~~~------~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~---~~----f~---- 302 (379)
..+..+|.++ |||+|+.+..... .+|+++.+++..++++|+.+++|||.++..+. .. |+
T Consensus 203 -~~~i~~w~~v~~~yGfd~s~~~~~~~~~~~~~~e~~v~~~~~~~~Ls~p~~i~~~D~~~~~~~~~~~~~~~~~f~~~~~ 281 (376)
T 4hc4_A 203 -EWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCY 281 (376)
T ss_dssp -HHHHHGGGGHHHHHSCCCGGGHHHHHHHHHSSCEEEEECCCGGGBCSCCEEEEEEETTCTTHHHHHHHCEEEEEEEECC
T ss_pred -hhhhcchhccccccCcCchhhhhhhhhhhcccCceEEEeecccccccCCEEEEEEECCCCCccccccccceeEEEEEec
Confidence 3456788776 9999999876542 46888999999999999999999999876432 11 11
Q ss_pred --------------------cCCcEEEecCCCCCCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEE
Q 016992 303 --------------------CHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYS 362 (379)
Q Consensus 303 --------------------~~~~~~lst~P~~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~ 362 (379)
++.++.|||+|..+.|||+|++|+|++|+.|++|++|++++++++++.++|+++|+++|+
T Consensus 282 ~~g~vhg~~~WFd~~f~~~~~~~~v~lST~P~~~~THW~Q~v~~L~~Pi~V~~G~~I~g~i~~~~~~~n~R~~~i~i~~~ 361 (376)
T 4hc4_A 282 GSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYK 361 (376)
T ss_dssp SSEEEEEEEEEEEEEECCCC--CCEEEECCTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCTTSEEEEEEEE
T ss_pred CCcEEEEEEEEEEEEecCCCCCCceEEeCCCCcCCCceeeEEEEeCCceEeCCCCEEEEEEEEEECCCCCceeEEEEEEE
Confidence 235689999999999999999999999999999999999999999999999999999999
Q ss_pred EcceeeeeeceEEeeeC
Q 016992 363 LQGRHSAISRIQYYKMR 379 (379)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (379)
+.++..+ ++.|+|+
T Consensus 362 ~~~~~~~---~~~~~~~ 375 (376)
T 4hc4_A 362 VGDQEEK---TKDFAME 375 (376)
T ss_dssp ETTSCCE---EEEEEEC
T ss_pred eCCCCcc---eEEEeCC
Confidence 9987644 4889986
No 2
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=2.6e-49 Score=378.66 Aligned_cols=301 Identities=59% Similarity=1.014 Sum_probs=269.9
Q ss_pred CCCccchhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHH
Q 016992 79 DDKTSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMAN 158 (379)
Q Consensus 79 ~~~~~~~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~ 158 (379)
+.+...+.||+.|+.+..+..|++|..|+..|.++|.......++.+|||||||+|.+++.+++.|+++|+|+|+|+|++
T Consensus 23 ~~~~~~~~yf~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~ 102 (349)
T 3q7e_A 23 EDMTSKDYYFDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISD 102 (349)
T ss_dssp --------------CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHH
T ss_pred cccchHHHHHHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHH
Confidence 33445578999999999999999999999999999987767788999999999999999999999888999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEee
Q 016992 159 MAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIE 238 (379)
Q Consensus 159 ~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~ 238 (379)
.|+++++.+++.++|+++++|+++++++.++||+|+++++++++.++..+..++.++.++|||||+++|..++++..++.
T Consensus 103 ~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~~~~~~~ 182 (349)
T 3q7e_A 103 YAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATLYVTAIE 182 (349)
T ss_dssp HHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEEC
T ss_pred HHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceEEEeeec
Confidence 99999999999888999999999998877899999999998989888999999999999999999999999999999999
Q ss_pred cccccccccccccccccccchhhhhhhccCceEEeeCCCcccCCCeeeEeeeCCCCCCCCceEe----------------
Q 016992 239 DAEYKDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFT---------------- 302 (379)
Q Consensus 239 ~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~~~f~---------------- 302 (379)
...+......+|.+.+|++++.+.+....+|+++.+++..++++|+.+.++||.++..+++.|.
T Consensus 183 ~~~~~~~~~~~w~~~~G~d~~~~~~~~~~~p~v~~~~~~~~~~~~~~~~~~dl~~~~~~~l~~~~~~~~~~~~~~~~~g~ 262 (349)
T 3q7e_A 183 DRQYKDYKIHWWENVYGFDMSCIKDVAIKEPLVDVVDPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQVKRNDYVHAL 262 (349)
T ss_dssp CHHHHHHHTGGGGCBTTBCCGGGHHHHHTSCEEECCCGGGEEEEEEEEEEEETTTCCGGGGSEEEEEEEEBCSSEEEEEE
T ss_pred ChhhhhhhhcccccccCcchHHHhHhhhcCcEEEEEChhhEecccEEEEEEEcccCchhhcceeeeEEEEEccCCEEEEE
Confidence 9888877888999999999999999999999999999999999999999999999887776432
Q ss_pred ----------cCCcEEEecCCCCCCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEEEcceeeeeec
Q 016992 303 ----------CHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISR 372 (379)
Q Consensus 303 ----------~~~~~~lst~P~~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (379)
++.++.|||+|..+.|||+|++|+|++|+.|++|++|++++++++++.++|+++|+++|++.|+..++-+
T Consensus 263 ~~~Fd~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 342 (349)
T 3q7e_A 263 VAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFTIDLDFKGQLCELSC 342 (349)
T ss_dssp EEEEEEECTTSSSCCEEECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCSSCEEEEEEEEEECSSCEEEE
T ss_pred EEEEEEEecCCCCccEEECCCCcCCCcceeEEEEECCceEeCCCCEEEEEEEEEECCCCCeeEEEEEEEEeCCccccccc
Confidence 3458999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeeeC
Q 016992 373 IQYYKMR 379 (379)
Q Consensus 373 ~~~~~~~ 379 (379)
+++|+||
T Consensus 343 ~~~~~~~ 349 (349)
T 3q7e_A 343 STDYRMR 349 (349)
T ss_dssp EEEEEEC
T ss_pred CceEecC
Confidence 9999996
No 3
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=1e-48 Score=371.53 Aligned_cols=294 Identities=52% Similarity=0.909 Sum_probs=271.3
Q ss_pred hhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHH
Q 016992 86 YYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVE 165 (379)
Q Consensus 86 ~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~ 165 (379)
.||+.|.++.+|..|++|..|+..|.++|.+.....++.+|||||||+|.+++.+++.|+.+|+|+|+++|++.|+++++
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~ 81 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVE 81 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHH
T ss_pred chhhhhcCchHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHH
Confidence 58999999999999999999999999999877777788999999999999999999998889999999888999999999
Q ss_pred HcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeeccccccc
Q 016992 166 ANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDD 245 (379)
Q Consensus 166 ~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~~ 245 (379)
.+++.++|+++++|+.+++++.++||+|+++++++++.++..+..++.++.++|||||.++|+.+++++.+++...+...
T Consensus 82 ~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 161 (328)
T 1g6q_1 82 LNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLEDSQYKDE 161 (328)
T ss_dssp HTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHHH
T ss_pred HcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEecCchhhhh
Confidence 99998889999999999887778999999999888888888999999999999999999999999999999988777666
Q ss_pred ccccccccccccchhhhhhhccCceEEeeCCCcccCCCeeeEeeeCCCCCCCCceEe-----------------------
Q 016992 246 KIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFT----------------------- 302 (379)
Q Consensus 246 ~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~~~f~----------------------- 302 (379)
...+|.+.+|++++.+.+.....|++..+++..++++|+.++++||.++..+++.|.
T Consensus 162 ~~~~w~~~~gf~~~~~~~~~~~~~~v~~~~~~~~ls~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~wfd~~ 241 (328)
T 1g6q_1 162 KLNYWQDVYGFDYSPFVPLVLHEPIVDTVERNNVNTTSDKLIEFDLNTVKISDLAFKSNFKLTAKRQDMINGIVTWFDIV 241 (328)
T ss_dssp HHHHTTCBTTBCCTTHHHHHTTSCEEECCCGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEEBCSSCEEEEEEEEEEEE
T ss_pred hhcccccccCcChHHHhhhhhcCCeEEEeccceeecCCEEEEEEECCCCChhHhceeeeEEEEEecCcEEEEEEEEEEEE
Confidence 677899999999999999988999999999999999999999999999876665322
Q ss_pred cC-----CcEEEecCCCCCCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEEEcceee-----eeec
Q 016992 303 CH-----KLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHS-----AISR 372 (379)
Q Consensus 303 ~~-----~~~~lst~P~~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 372 (379)
.. +++.+||+|..+.+||+|++|+|++|+.|++|++|++++++++++.++|+++|.++|+++|... ...+
T Consensus 242 ~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 321 (328)
T 1g6q_1 242 FPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEGELVCSPNEKNNRDLNIKISYKFESNGIDGNSRSRKN 321 (328)
T ss_dssp CCCCTTSCCCEEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEEEEEEEEETTEEEEEEEEEEEEEECCSSTHHHHCEEE
T ss_pred cCCCCCCCceEEECCCCcCCCcceeEEEEeCCceecCCCCEEEEEEEEEECCCCCceEEEEEEEEecCccCccccccccc
Confidence 22 3799999999999999999999999999999999999999999999999999999999999988 8889
Q ss_pred eEEeeeC
Q 016992 373 IQYYKMR 379 (379)
Q Consensus 373 ~~~~~~~ 379 (379)
+|+|+|+
T Consensus 322 ~~~~~~~ 328 (328)
T 1g6q_1 322 EGSYLMH 328 (328)
T ss_dssp EEEEEEC
T ss_pred ceeEEeC
Confidence 9999996
No 4
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=8.6e-46 Score=352.92 Aligned_cols=287 Identities=49% Similarity=0.862 Sum_probs=260.3
Q ss_pred hhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHH
Q 016992 85 DYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIV 164 (379)
Q Consensus 85 ~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~ 164 (379)
..||+.|....++..|++|..|+..|.++|.+.....++.+|||||||+|.+++.+++.|+.+|+|+|+++|++.|++++
T Consensus 27 ~~Y~~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~ 106 (340)
T 2fyt_A 27 GVYFSSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDII 106 (340)
T ss_dssp ---CCGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHH
T ss_pred hhHHHhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHH
Confidence 45999999999999999999999999999998877889999999999999999999999878999999999899999999
Q ss_pred HHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeecccccc
Q 016992 165 EANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKD 244 (379)
Q Consensus 165 ~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~ 244 (379)
+.+++.++++++++|+.+++++.++||+|+++++++++.++.++..++.++.++|||||.++|+.+++++.++....+..
T Consensus 107 ~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~ 186 (340)
T 2fyt_A 107 RLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHA 186 (340)
T ss_dssp HHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEEEEEECCHHHHH
T ss_pred HHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEEEEEecchhHhh
Confidence 99999888999999999988877899999999988889888999999999999999999999999999999998877777
Q ss_pred cccccccccccccchhhhhhhccCceEEeeCCCcccCCCeeeEeeeCCCCCCCCceEe----------------------
Q 016992 245 DKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDASFT---------------------- 302 (379)
Q Consensus 245 ~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~~~f~---------------------- 302 (379)
....+|.+.+|++++.+.+.....|+++.+++..++++|+.+.++||.+...+++.|.
T Consensus 187 ~~~~~w~~~~g~~~~~~~~~~~~~~~v~~~~~~~~ls~p~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~wfd~ 266 (340)
T 2fyt_A 187 DRIAFWDDVYGFKMSCMKKAVIPEAVVEVLDPKTLISEPCGIKHIDCHTTSISDLEFSSDFTLKITRTSMCTAIAGYFDI 266 (340)
T ss_dssp HHTGGGGCBTTBCCGGGHHHHTTBCEEECCCGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEEBCSCEEEEEEEEEEEE
T ss_pred hhhcccccccCcChHHHHHhhhcCcEEEEechhhcccCCEEEEEEECCCCcccccceEeeEEEEEccCcEEEEEEEEEEE
Confidence 7788999999999999998888899999999999999999999999998776554322
Q ss_pred -c----CCcEEEecCCCCCCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEEEcceeeeeeceEEee
Q 016992 303 -C----HKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHSAISRIQYYK 377 (379)
Q Consensus 303 -~----~~~~~lst~P~~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (379)
. ++++.|||+|..+.+||+|++|+|++|+.|++|++|+++++++.++.++|+++|.++|+. ++|.|+
T Consensus 267 ~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~~--------~~~~~~ 338 (340)
T 2fyt_A 267 YFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKAGEALKGKVTVHKNKKDPRSLTVTLTLNN--------STQTYG 338 (340)
T ss_dssp EECTTCSSCEEEECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCTTSEEEEEEETT--------EEEEEE
T ss_pred EeecCCCCCEEEECCCCcCCCccccEEEEeCCceEcCCCCEEEEEEEEEECCCCCceEEEEEEEEc--------ceEEEe
Confidence 2 468999999999999999999999999999999999999999999999999999999854 368888
Q ss_pred eC
Q 016992 378 MR 379 (379)
Q Consensus 378 ~~ 379 (379)
||
T Consensus 339 ~~ 340 (340)
T 2fyt_A 339 LQ 340 (340)
T ss_dssp EC
T ss_pred cC
Confidence 86
No 5
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=9.5e-45 Score=350.32 Aligned_cols=286 Identities=35% Similarity=0.650 Sum_probs=255.9
Q ss_pred cchhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHH
Q 016992 83 SADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQ 162 (379)
Q Consensus 83 ~~~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~ 162 (379)
..+.||+.|+.+..+..|++|..++..|.++|.......++.+|||||||+|.+++.+++.|+++|+|||+|+|++.|++
T Consensus 24 ~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~ 103 (376)
T 3r0q_C 24 DYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARA 103 (376)
T ss_dssp ----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHH
Confidence 34679999999999999999999999999999988888899999999999999999999998889999999998999999
Q ss_pred HHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeecccc
Q 016992 163 IVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEY 242 (379)
Q Consensus 163 ~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~ 242 (379)
+++.+++.++|+++++|+++++++ ++||+|+++++++++.++.++..++.++.++|||||.++|+.++++..++....+
T Consensus 104 ~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 182 (376)
T 3r0q_C 104 LVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARMWLAPIKSNIA 182 (376)
T ss_dssp HHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEEEEEEECCTHH
T ss_pred HHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeEEEEeecchHH
Confidence 999999988899999999999887 8999999999999998888999999999999999999999999999999987755
Q ss_pred ccccc----------ccc---cccccccchhhhhh--------hccCceEEeeCCCcccCCCeeeEeeeCCCCCCCCce-
Q 016992 243 KDDKI----------EFW---NNVYGFDMSCIKKQ--------AMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDAS- 300 (379)
Q Consensus 243 ~~~~~----------~~w---~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~~~- 300 (379)
..... .+| .+.+|++++.+.+. ...+|+++.+.+..++++|+.++++||.++...++.
T Consensus 183 ~~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~lt~~~~~~~~d~~~~~~~~l~~ 262 (376)
T 3r0q_C 183 DRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKYYIQTAMWNDLNPQQIIGTPTIVKEMDCLTASVSEIEE 262 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHHHHHHHHTSBCEEECCCGGGBCBCCEEEEEEETTTCCGGGTSE
T ss_pred hhhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhhhhhhhcccCceEEEEChHHccCCCeEEEEEEcCcCCHHHhcc
Confidence 43333 678 78999999999887 568999999999999999999999999998766542
Q ss_pred ----Ee--------------------c--------CCcEEEecCCC-CCCCCeeeEEEEcCCceecCCCCEEEEEEEEee
Q 016992 301 ----FT--------------------C--------HKLMGFSTGPK-SRATHWKQTVLYLEDVLTICEGEAISGSLTVAP 347 (379)
Q Consensus 301 ----f~--------------------~--------~~~~~lst~P~-~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~ 347 (379)
|+ . +.++.|||+|. .+.|||+|++|+|++|+.|++|++|++++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~~~~~v~lSt~P~~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~ 342 (376)
T 3r0q_C 263 VRSNVTSVINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPINVEEGDNLNLGLLMSR 342 (376)
T ss_dssp EEEEEEEBCSCSCEEEEEEEEEEEEEEEEETTEEEEEEEEEECCCCSSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEE
T ss_pred cccceEEEEeccCceEEEEEEEEEEEecCCccCCCCCccEEECCCCcCCCCceeeEEEEECCceecCCCCEEEEEEEEEE
Confidence 11 1 23589999998 468999999999999999999999999999999
Q ss_pred CCCCCceEEEEEEEEEcceeee
Q 016992 348 NKKNPRDVDIMLKYSLQGRHSA 369 (379)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ 369 (379)
++.++|+++|.++|+++++..+
T Consensus 343 ~~~~~r~~~~~~~~~~~~~~~~ 364 (376)
T 3r0q_C 343 SKENHRLMEIELNCEIKEASGN 364 (376)
T ss_dssp CSSCTTSEEEEEEEEEECSSSC
T ss_pred CCCCCeeEEEEEEEEecCcCCC
Confidence 9999999999999999887753
No 6
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=9.2e-37 Score=291.67 Aligned_cols=281 Identities=37% Similarity=0.576 Sum_probs=230.1
Q ss_pred cchhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHH
Q 016992 83 SADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQ 162 (379)
Q Consensus 83 ~~~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~ 162 (379)
..+.||+.|.++..+..|++|..++..|.++|.......++.+|||||||+|.+++.+++.|+.+|+|+|++++++.|++
T Consensus 11 ~~~~y~~~y~~~~~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~ 90 (348)
T 2y1w_A 11 SAVQYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEV 90 (348)
T ss_dssp HHHHHHHHHTCHHHHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHH
T ss_pred cHHHHHHHHhhhhHHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHH
Confidence 34679999999999999999999999999999988888899999999999999999999988889999999987799999
Q ss_pred HHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeecccc
Q 016992 163 IVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEY 242 (379)
Q Consensus 163 ~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~ 242 (379)
+++.+++.++++++++|+++++++ ++||+|+++++++++..+.. ...+..+.++|||||.++++.++++..++....+
T Consensus 91 ~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~-~~~l~~~~~~LkpgG~li~~~~~~~~~~i~~~~~ 168 (348)
T 2y1w_A 91 LVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERM-LESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQL 168 (348)
T ss_dssp HHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSH-HHHHHHGGGGEEEEEEEESCEEEEEEEEECCHHH
T ss_pred HHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHH-HHHHHHHHhhcCCCeEEEEecCcEEEEEecchHH
Confidence 999999988899999999998776 78999999988776665544 4556678899999999999999999998877654
Q ss_pred ccc---ccccc--cccccccchhhhhhh----ccCceEEeeCCCcccCCCeeeEeeeCCCCCCCCce-------Ee----
Q 016992 243 KDD---KIEFW--NNVYGFDMSCIKKQA----MMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDAS-------FT---- 302 (379)
Q Consensus 243 ~~~---~~~~w--~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~~~-------f~---- 302 (379)
..+ ...+| ....|++++.+.... +..|.++..+...... +.....+||.+....++. |+
T Consensus 169 ~~~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~f~~p~~d~~~~~~~~~-~~~~~~~df~~~~~~~~~~~~~~~~~~~~~~ 247 (348)
T 2y1w_A 169 YMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMA-KSVKYTVNFLEAKEGDLHRIEIPFKFHMLHS 247 (348)
T ss_dssp HHHHHHHHGGGCCSCBTTBCCGGGHHHHHHHHHTSCEEECCCGGGBCB-CCEEEEEETTTCCGGGGSEEEEEEEEEBSSC
T ss_pred hhhhccccCcccccccCcccHHHhhhHHHhhhccCCeEEeECCeeecC-cceEEEEECCcCChHHhceeeeeEEEEEccC
Confidence 422 23456 357899998876654 3567777655443333 334567799887655542 11
Q ss_pred ----------------cCCcEEEecCCCCCCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEEEcce
Q 016992 303 ----------------CHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGR 366 (379)
Q Consensus 303 ----------------~~~~~~lst~P~~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (379)
++..+.+||+|..+.+||+|++|+|++|+.|++|++|+++++++.++.+ +++++++|++++.
T Consensus 248 g~~~g~~~wfd~~~~~~~~~v~lSt~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~--~~~~~~~~~~~~~ 325 (348)
T 2y1w_A 248 GLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKRQ--SYDISIVAQVDQT 325 (348)
T ss_dssp EEEEEEEEEEEEEEECSSCEEEEECCTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECTTS--SEEEEEEEEETTT
T ss_pred cEEEEEEEEEEEEEcCCCCceEEECCCCcCCCeeeeEEEeeCCceEeCCCCEEEEEEEEEECCCC--CcEEEEEEEEccc
Confidence 2347899999999999999999999999999999999999999988754 5778888888876
Q ss_pred ee
Q 016992 367 HS 368 (379)
Q Consensus 367 ~~ 368 (379)
..
T Consensus 326 ~~ 327 (348)
T 2y1w_A 326 GS 327 (348)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 7
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=2.6e-37 Score=310.92 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=218.7
Q ss_pred hhHHhhcCHHHHHHHHHHHHhcc--------CCCCCCEEEEEcCCCchHHHHHHHcC---CC--EEEEEecHHHHHHHHH
Q 016992 96 IHEEMLKDVVRTKSYQNVIYQNK--------FLFKDKVVLDVGAGTGILSLFCAKAG---AA--HVYAVECSQMANMAKQ 162 (379)
Q Consensus 96 ~~~~~l~d~~r~~~~~~~i~~~~--------~~~~~~~VLDlGcG~G~~~~~la~~g---~~--~v~~vD~s~~~~~a~~ 162 (379)
.++.+-+|..++..|.++|.+++ ....+.+|||+|||+|.++..+++++ .. +|+|||.|+++..|++
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~~ 402 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLE 402 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHHH
T ss_pred hhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH
Confidence 34557789999999999998643 22345689999999999966666543 33 7899999998889999
Q ss_pred HHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeecccc
Q 016992 163 IVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEY 242 (379)
Q Consensus 163 ~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~ 242 (379)
....|++.++|+++++|++++.+| +++|+||||+||+++.+|.++ .++.+..++|||||.++|+.+++|++++++..+
T Consensus 403 ~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~ml-evL~Ardr~LKPgGimiPs~atlyiapi~~~~l 480 (637)
T 4gqb_A 403 NWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSP-ECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKL 480 (637)
T ss_dssp HHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHH-HHHHHHGGGEEEEEEEESCEEEEEEEEEECHHH
T ss_pred HHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCH-HHHHHHHHhcCCCcEEccccceEEEEEecCHHH
Confidence 999999999999999999999998 899999999999999999987 789999999999999999999999999999988
Q ss_pred cccccccccccccccchhhhhhhccCceEEeeCCCcccCCCeeeEeeeCCCCCCC-C------ceEe-------------
Q 016992 243 KDDKIEFWNNVYGFDMSCIKKQAMMEPLVDTVDQNQIVTNCQLLKTMDISKMGPG-D------ASFT------------- 302 (379)
Q Consensus 243 ~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~-~------~~f~------------- 302 (379)
+.+...+|...++++.. +..|++..+.+...+++|+.+++|||.+.... + +.|+
T Consensus 481 ~~e~~~~~~~~~~~~~~------~~~p~Vv~~~~~~~Ls~p~~~~~fd~~~~~~~~~~~~~~~~~f~i~~~g~vhGf~~w 554 (637)
T 4gqb_A 481 YNEVRACREKDRDPEAQ------FEMPYVVRLHNFHQLSAPQPCFTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGY 554 (637)
T ss_dssp HHHHHTTCCTTSCTTGG------GGSCEECBCCSCEECSCCEEEEEEESSCCSTTCCCCEEEEEEEECCSCEEEEEEEEE
T ss_pred HHHHHhcccccccchhh------cCCcEEEEecCccccCCCEEEEEEECCCCCccccceEEEEEEEEecCCcEEEEEEEE
Confidence 88877788777776542 46788888888899999999999999764432 1 1232
Q ss_pred ----cCCcEEEecCCCC---CCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEEEcceee
Q 016992 303 ----CHKLMGFSTGPKS---RATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRHS 368 (379)
Q Consensus 303 ----~~~~~~lst~P~~---~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (379)
+++++.|||+|.. +.|||+|++|||++|+.|++|++|+++++++.+.. .+|++|.++....
T Consensus 555 FD~~f~~~V~LST~P~~~s~~~THW~Q~vfpL~~Pl~V~~Gd~I~~~~~R~~d~~-----kVWYEW~v~~p~~ 622 (637)
T 4gqb_A 555 FETVLYQDITLSIRPETHSPGMFSWFPILFPIKQPITVREGQTICVRFWRCSNSK-----KVWYEWAVTAPVC 622 (637)
T ss_dssp EEEEEETTEEEECSGGGCCTTCCSCCCEEEEEEEEEEECTTCEEEEEEEEEECSS-----EEEEEEEEEESSC
T ss_pred EEEEeeCCeEEECCCCCCCCCCCcccCeEEEeCCCeEECCCCEEEEEEEEEeCCC-----ceeEEEEEeCCcC
Confidence 4578999999964 45999999999999999999999999999775542 3899999887653
No 8
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=3.5e-36 Score=301.04 Aligned_cols=263 Identities=17% Similarity=0.204 Sum_probs=211.5
Q ss_pred hhhHHhhcCHHHHHHHHHHHHhccCC-C----CCCEEEEEcCCCchHHHHHHHc----C----------CCEEEEEecHH
Q 016992 95 GIHEEMLKDVVRTKSYQNVIYQNKFL-F----KDKVVLDVGAGTGILSLFCAKA----G----------AAHVYAVECSQ 155 (379)
Q Consensus 95 ~~~~~~l~d~~r~~~~~~~i~~~~~~-~----~~~~VLDlGcG~G~~~~~la~~----g----------~~~v~~vD~s~ 155 (379)
..+..|++|..|+..|.++|.++... . .+.+|||||||+|.+++.++++ + +.+|+|||.|+
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp 456 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNP 456 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCH
T ss_pred HHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCCh
Confidence 45677999999999999999887422 1 2468999999999997654332 2 24999999999
Q ss_pred -HHHHHHHHHHHcCCCCcEEEEEcceeeccCC-----CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 156 -MANMAKQIVEANGFSNVITVLKGKIEEIELP-----VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 156 -~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
++..++... .|++.++|+++++|++++.++ .+++|+|||++||+++.+|-. +.+|..+.++|||||.+||+.
T Consensus 457 ~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~-pe~Ld~v~r~Lkp~Gi~iP~~ 534 (745)
T 3ua3_A 457 NAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELS-PECLDGVTGFLKPTTISIPQK 534 (745)
T ss_dssp HHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSH-HHHHHTTGGGSCTTCEEESCE
T ss_pred HHHHHHHHHH-hcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhcc-HHHHHHHHHhCCCCcEEECCc
Confidence 555555444 489999999999999999872 389999999999999988744 568888899999999999999
Q ss_pred CceEEEEeecccccccccccccc--ccccc-----c--------------hhhhhhhccCceEEeeCCCcccCC-CeeeE
Q 016992 230 ASLYLTAIEDAEYKDDKIEFWNN--VYGFD-----M--------------SCIKKQAMMEPLVDTVDQNQIVTN-CQLLK 287 (379)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~w~~--~~g~~-----~--------------~~~~~~~~~~~~~~~~~~~~~ls~-p~~l~ 287 (379)
+++|++++.+..++.+...++.. .+||. + .+.....+..|++..+.+..++++ |+.++
T Consensus 535 ~t~ylaPi~~~~l~~~v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e~PyVv~l~~~~~Ls~~pq~vf 614 (745)
T 3ua3_A 535 YTSYVKPIMSTHIHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMDQIYVVYLSKYIPLAETTKPVF 614 (745)
T ss_dssp EEEEEEEEECHHHHHHHHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHSSCEEECCCSCEESSSSCEEEE
T ss_pred cEEEEEEecCHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccEEEeeccceecCCCCceEE
Confidence 99999999998876655444322 23332 1 233555678999999999999999 99999
Q ss_pred eeeCCCCCCCCce------Ee-----------------cCCcEEEecCCCCC---CCCeeeEEEEcCCceecCCCCEEEE
Q 016992 288 TMDISKMGPGDAS------FT-----------------CHKLMGFSTGPKSR---ATHWKQTVLYLEDVLTICEGEAISG 341 (379)
Q Consensus 288 ~~df~~~~~~~~~------f~-----------------~~~~~~lst~P~~~---~~~W~q~~~~l~~p~~v~~g~~i~~ 341 (379)
+||+.+....+.. |+ +.++|.|||+|.++ .+||+|++|||++|+.|++|+.|++
T Consensus 615 tFdhp~~~~~d~~r~~~~~F~~~r~g~iHGfagwFDi~Lyk~V~LST~P~t~s~~mThWfQtfFPL~ePL~V~~GdeI~g 694 (745)
T 3ua3_A 615 TFEHPNFMNSSNERSDSIEFVMDRNADLMGFAGYFDLQLYKTVMLSIEPSTHTPGMVSWFPAVIPLRDQLRVGEGDRISL 694 (745)
T ss_dssp EEESSCTTCCCSCEEEEEEEECCSSEEEEEEEEEEEEEEETTEEEECSSTTCCTTCCSCCCEEEEEEEEEEECTTCEEEE
T ss_pred EEECCCCCccccceeEEEEEEeCCCcEEEEEEEEEEEEecCCcEEecCCCCCCCCCccceeEEEecCCceEeCCCCEEEE
Confidence 9999887755543 22 34789999999876 5899999999999999999999999
Q ss_pred EEEEeeCCCCCceEEEEEEEEEc
Q 016992 342 SLTVAPNKKNPRDVDIMLKYSLQ 364 (379)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~ 364 (379)
+++++.+. ..+|++|.++
T Consensus 695 ~~~R~~d~-----~kVWYEW~v~ 712 (745)
T 3ua3_A 695 KIDRKVDN-----TGVWYEWHVE 712 (745)
T ss_dssp EEEEEEET-----TEEEEEEEEE
T ss_pred EEEEEcCC-----CCEEEEEEEE
Confidence 99976553 4589999987
No 9
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=100.00 E-value=2.1e-34 Score=285.28 Aligned_cols=277 Identities=36% Similarity=0.588 Sum_probs=223.7
Q ss_pred hhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHH
Q 016992 86 YYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVE 165 (379)
Q Consensus 86 ~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~ 165 (379)
.|++.|.....+..|+.|..+++.|.+++.......++.+|||||||+|.+++.+++.|..+|+|+|+|++++.|++++.
T Consensus 122 ~~~~~y~~~~~~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~ 201 (480)
T 3b3j_A 122 QYFQFYGYLSQQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVK 201 (480)
T ss_dssp EEEEGGGCSCHHHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHH
T ss_pred hHHHHHhhhccchhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHH
Confidence 45666666555788999999999999999987777788999999999999999999988889999999998899999999
Q ss_pred HcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEEEEeeccccccc
Q 016992 166 ANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYLTAIEDAEYKDD 245 (379)
Q Consensus 166 ~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~~~~~~~~~~~~ 245 (379)
.+++.++|+++++|+.+++++ ++||+|+++++++++..+..+ ..+..+.++|||||.+++..++++..++....++.+
T Consensus 202 ~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~-~~l~~~~~~LkpgG~li~~~~~~~~~pi~~~~l~~e 279 (480)
T 3b3j_A 202 SNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERML-ESYLHAKKYLKPSGNMFPTIGDVHLAPFTDEQLYME 279 (480)
T ss_dssp HTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHH-HHHHHGGGGEEEEEEEESCEEEEEEEEECCHHHHHH
T ss_pred HcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHH-HHHHHHHHhcCCCCEEEEEeceeeeeccCchHHHHH
Confidence 999988899999999988766 789999999887776665544 455578899999999999999999998877654322
Q ss_pred ---cccccc--ccccccchhhhhhh----ccCceEEeeCCCcccCCCeeeEeeeCCCCCCCCce-----E--e-------
Q 016992 246 ---KIEFWN--NVYGFDMSCIKKQA----MMEPLVDTVDQNQIVTNCQLLKTMDISKMGPGDAS-----F--T------- 302 (379)
Q Consensus 246 ---~~~~w~--~~~g~~~~~~~~~~----~~~~~~~~~~~~~~ls~p~~l~~~df~~~~~~~~~-----f--~------- 302 (379)
...+|. ..+|++++.+.... +..|+++..+.....+.+. ...+||.+...+++. | +
T Consensus 280 ~~~~~~~w~~~~~~g~dl~~l~~~~~~~~f~~pvvd~~~~~~~y~~tl-~~~~d~~~~~~~~l~~~~~~~~~~~~~~g~~ 358 (480)
T 3b3j_A 280 QFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVDTFDIRILMAKSV-KYTVNFLEAKEGDLHRIEIPFKFHMLHSGLV 358 (480)
T ss_dssp HHHHHHHHHSSCBTTBCCGGGHHHHHHHHTTSCEECCCCSTTBCSCCE-EEEEETTTCCTTTTTEEEEEEEEECSSCEEE
T ss_pred HhhccCccccccCCCcChhhhhhHHHHhccCCcEEEEeecccccchhh-hhhhhhhcCChhhhcceeeeEEEEEccCcEE
Confidence 234563 57899998876654 3457776655555555544 458899876655442 1 1
Q ss_pred -------------cCCcEEEecCCCCCCCCeeeEEEEcCCceecCCCCEEEEEEEEeeCCCCCceEEEEEEEEEccee
Q 016992 303 -------------CHKLMGFSTGPKSRATHWKQTVLYLEDVLTICEGEAISGSLTVAPNKKNPRDVDIMLKYSLQGRH 367 (379)
Q Consensus 303 -------------~~~~~~lst~P~~~~~~W~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (379)
++..+.|||+|..+.+||+|++|+|++|+.|++|++|+++++++.++. ++++|+++|.+++..
T Consensus 359 hg~~~wFd~~~~~~~~~v~lST~P~~~~thW~q~~~~l~~p~~v~~g~~i~g~~~~~~~~~--~~~~v~~~~~~~~~~ 434 (480)
T 3b3j_A 359 HGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSGTCLLIANKR--QSYDISIVAQVDQTG 434 (480)
T ss_dssp EEEEEEEEEEEECSSCEEESSSCCSSSCCCSEEEEEEEEEEEEECTTCEEEEEEEEEECTT--SSEEEEEEEEETTTC
T ss_pred EEEEEEEEEEEcCCCCceEEeCCCCcCCCeeeeEEEEeCCceEeCCCCEEEEEEEEEECCC--CCcEEEEEEEEccCC
Confidence 234788999999999999999999999999999999999999998865 456889999988865
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.70 E-value=9.6e-17 Score=146.69 Aligned_cols=105 Identities=17% Similarity=0.276 Sum_probs=90.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc-C--CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA-G--AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~-g--~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
..+|.+|||||||+|.++..+++. + ..+|+|||+|+ |++.|++++...+...+|+++++|+.++++ +.||+|++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--ccccccee
Confidence 578999999999999999999984 2 34999999999 999999999998888889999999998876 56999999
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+.+++. ......++++++++|||||.++.
T Consensus 146 ~~~l~~~~-~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 146 NFTLQFLE-PSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp ESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeeeeecC-chhHhHHHHHHHHHcCCCcEEEE
Confidence 76544442 34556899999999999999985
No 11
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.69 E-value=3.4e-16 Score=142.27 Aligned_cols=107 Identities=18% Similarity=0.282 Sum_probs=94.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
...++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|++++...++.++++++++|+.++++++++||+|++..
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 5577889999999999999999997555999999999 999999999999998889999999999888778999999976
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+.+++ ++..++.++.++|||||+++...
T Consensus 123 ~l~~~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 123 AIYNI----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CSCCC----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hHhhc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 54433 47889999999999999998543
No 12
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.68 E-value=2.2e-16 Score=144.60 Aligned_cols=106 Identities=20% Similarity=0.321 Sum_probs=94.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ +++.|+++++..+++++++++++|+.++++++++||+|++..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 578899999999999999999998667999999999 9999999999999988899999999998877789999998765
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
.+.+ .+..++.++.++|||||+++...
T Consensus 124 ~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 124 IYNI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp GGGT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ceec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 4333 56889999999999999998543
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.68 E-value=2.7e-16 Score=142.86 Aligned_cols=113 Identities=16% Similarity=0.140 Sum_probs=95.4
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
..+.......++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++++|+.++++ +++|
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~f 104 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKC 104 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCE
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCC
Confidence 33444456678999999999999999999985334999999999 999999999999987789999999999877 5899
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|+|++..+.+ +..++..++.++.++|||||.++..
T Consensus 105 D~V~~~~~~~---~~~~~~~~l~~~~r~LkpgG~l~~~ 139 (256)
T 1nkv_A 105 DVAACVGATW---IAGGFAGAEELLAQSLKPGGIMLIG 139 (256)
T ss_dssp EEEEEESCGG---GTSSSHHHHHHHTTSEEEEEEEEEE
T ss_pred CEEEECCChH---hcCCHHHHHHHHHHHcCCCeEEEEe
Confidence 9999865433 3356789999999999999999853
No 14
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.67 E-value=6.4e-16 Score=141.76 Aligned_cols=117 Identities=20% Similarity=0.144 Sum_probs=99.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
.+.+.+.......++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++...++.++++++++|+.++++++
T Consensus 48 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~ 127 (273)
T 3bus_A 48 RLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED 127 (273)
T ss_dssp HHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC
Confidence 34455555566778999999999999999999985346999999999 99999999999998888999999999988877
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++||+|++..+ +.+..+...++.++.++|||||.++..
T Consensus 128 ~~fD~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 128 ASFDAVWALES---LHHMPDRGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp TCEEEEEEESC---TTTSSCHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCccEEEEech---hhhCCCHHHHHHHHHHHcCCCeEEEEE
Confidence 89999998655 334466789999999999999999854
No 15
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.67 E-value=3e-16 Score=136.15 Aligned_cols=104 Identities=26% Similarity=0.364 Sum_probs=89.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~Iv~~~ 197 (379)
.++.+|||+|||+|.+++.++..+..+|+|+|+++ +++.|++++..+++ ++++++++|+.++. ++.++||+|++++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~ 121 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAGTTSPVDLVLADP 121 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHCCSSCCSEEEECC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhccCCCccEEEECC
Confidence 57889999999999999988888888999999999 99999999999998 67999999998874 3358999999986
Q ss_pred CccccCChhhHHHHHHHHHh--cccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDK--WLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~--~LkpgG~lip 227 (379)
+ +. .....+..++..+.+ +|+|||.++.
T Consensus 122 p-~~-~~~~~~~~~l~~~~~~~~L~pgG~l~~ 151 (189)
T 3p9n_A 122 P-YN-VDSADVDAILAALGTNGWTREGTVAVV 151 (189)
T ss_dssp C-TT-SCHHHHHHHHHHHHHSSSCCTTCEEEE
T ss_pred C-CC-cchhhHHHHHHHHHhcCccCCCeEEEE
Confidence 5 22 123567889999988 9999999985
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.67 E-value=5.4e-16 Score=140.72 Aligned_cols=110 Identities=22% Similarity=0.281 Sum_probs=93.4
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
..+.......++.+|||||||+|.++..+++.+..+|+|+|+++ +++.|+++.. ..+++++++|+.++++++++|
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCCe
Confidence 34555555668899999999999999999998777999999999 9999998765 256999999999998877899
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|+|++..+.+ +..++..+++++.++|||||.++..
T Consensus 110 D~v~~~~~l~---~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 110 NVVLSSLALH---YIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEEESCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEchhhh---hhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 9999876533 3367889999999999999999854
No 17
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.66 E-value=4.6e-16 Score=137.40 Aligned_cols=114 Identities=20% Similarity=0.301 Sum_probs=96.4
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (379)
+.+.+.......++ +|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++...++.++++++++|+.+++++++
T Consensus 32 ~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 110 (219)
T 3dlc_A 32 IAENIINRFGITAG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDN 110 (219)
T ss_dssp HHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTT
T ss_pred HHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcc
Confidence 34444444444555 9999999999999999997445999999999 999999999999987789999999999988878
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+||+|++..+.+++ .++..++.++.++|+|||.++.
T Consensus 111 ~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 111 YADLIVSRGSVFFW---EDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp CEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred cccEEEECchHhhc---cCHHHHHHHHHHhCCCCCEEEE
Confidence 99999997653433 6788999999999999999885
No 18
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.66 E-value=6.6e-16 Score=140.79 Aligned_cols=105 Identities=19% Similarity=0.245 Sum_probs=91.4
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
....++.+|||||||+|.++..+++.+. +|+|+|+|+ |++.|++++...+++ ++.++++|+.++++++++||+|++.
T Consensus 33 l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~fD~V~~~ 110 (260)
T 1vl5_A 33 AALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDERFHIVTCR 110 (260)
T ss_dssp HTCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTCEEEEEEE
T ss_pred hCCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCCEEEEEEh
Confidence 3456889999999999999999998764 999999999 999999999998885 6999999999998888899999987
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+.+ +..++..++.++.++|||||.++.
T Consensus 111 ~~l~---~~~d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 111 IAAH---HFPNPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp SCGG---GCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhH---hcCCHHHHHHHHHHHcCCCCEEEE
Confidence 5433 336778999999999999999985
No 19
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.65 E-value=2.3e-16 Score=148.15 Aligned_cols=114 Identities=15% Similarity=0.070 Sum_probs=93.6
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 194 (379)
....++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++++|+. +++++++|+.+++...++||+|+
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il 192 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKIL 192 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEE
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEE
Confidence 45678899999999999999999984 346999999999 999999999999985 59999999998764347899999
Q ss_pred EecCccccCC---hh----------------hHHHHHHHHHhcccCCEEEEecCCce
Q 016992 195 SEWMGYFLLF---EN----------------MLNTVLYARDKWLVDDGIVLPDKASL 232 (379)
Q Consensus 195 ~~~~~~~l~~---~~----------------~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (379)
+++++++... .+ ....++.++.++|||||++++++|++
T Consensus 193 ~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 193 LDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp EECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 9876544321 11 12588899999999999999877765
No 20
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.65 E-value=2.5e-16 Score=145.01 Aligned_cols=114 Identities=16% Similarity=0.097 Sum_probs=93.2
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----CCCce
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKV 190 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~ 190 (379)
....+|.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+. +++++++|+.++.. ..++|
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~f 157 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFF 157 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCE
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccC
Confidence 34578899999999999999999983 447999999999 999999999999985 69999999988754 24789
Q ss_pred eEEEEecCccccCC---------------hhhHHHHHHHHHhcccCCEEEEecCCce
Q 016992 191 DIIISEWMGYFLLF---------------ENMLNTVLYARDKWLVDDGIVLPDKASL 232 (379)
Q Consensus 191 D~Iv~~~~~~~l~~---------------~~~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (379)
|+|+++++++++.. ......++..+.++|||||.+++++|++
T Consensus 158 D~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 158 DKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 99999976554311 1234688999999999999999877665
No 21
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.65 E-value=1.8e-15 Score=141.14 Aligned_cols=114 Identities=18% Similarity=0.079 Sum_probs=96.8
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
....+.......++.+|||||||+|.++..+++. | .+|+|+|+|+ +++.|++++...++.++++++++|+.++ +
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~ 135 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D 135 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C
Confidence 3444555566788999999999999999999996 7 5999999999 9999999999999988899999999887 4
Q ss_pred CceeEEEEecCccccCC------hhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLF------ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++||+|++..+.+++.. ...+..++.++.++|||||.++.
T Consensus 136 ~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 181 (302)
T 3hem_A 136 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLL 181 (302)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEE
T ss_pred CCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence 89999999765444422 25668999999999999999985
No 22
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.65 E-value=5.2e-16 Score=137.33 Aligned_cols=114 Identities=14% Similarity=0.068 Sum_probs=94.3
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
.+...+.......++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++...+ +++++++|+.+++ ++
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCC-CS
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCC-CC
Confidence 4444455455566788999999999999999999864 999999999 9999999876643 6999999999987 45
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++||+|++..+.+++.....+..++.++.++|||||.++.
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 152 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVF 152 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 8999999987656665445567889999999999999984
No 23
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.65 E-value=1.4e-15 Score=141.33 Aligned_cols=106 Identities=21% Similarity=0.201 Sum_probs=93.8
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
...++.+|||||||+|.++..+++. |. +|+|+|+|+ +++.|++++...++.++++++++|+.++++++++||+|++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 157 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ 157 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence 5678899999999999999999985 65 999999999 99999999999998888999999999998887899999986
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.+.+ +..++..++.++.++|||||.++..
T Consensus 158 ~~l~---~~~~~~~~l~~~~~~LkpgG~l~~~ 186 (297)
T 2o57_A 158 DAFL---HSPDKLKVFQECARVLKPRGVMAIT 186 (297)
T ss_dssp SCGG---GCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhh---hcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5533 3356889999999999999999853
No 24
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.65 E-value=8.2e-16 Score=136.29 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=90.3
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCC----cEEEEEcceeeccCCCCceeE
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSN----VITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~~~~D~ 192 (379)
...++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|++++..++++. +++++++|+...+.+.++||+
T Consensus 26 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 105 (217)
T 3jwh_A 26 KQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDA 105 (217)
T ss_dssp HHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSE
T ss_pred HhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCE
Confidence 34577899999999999999999964 46999999999 9999999998887754 799999999776665678999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|++..+.+++ ....+..+++++.++|||||.++.
T Consensus 106 v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li~ 139 (217)
T 3jwh_A 106 ATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIVT 139 (217)
T ss_dssp EEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred EeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9987654444 334568999999999999998774
No 25
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.65 E-value=1.3e-15 Score=142.86 Aligned_cols=111 Identities=13% Similarity=0.159 Sum_probs=96.2
Q ss_pred HHHHhccC-CCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCC
Q 016992 112 NVIYQNKF-LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (379)
Q Consensus 112 ~~i~~~~~-~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (379)
+.+..... ..++.+|||+|||+|.++..+++. + .+|+|+|+++ +++.|++++..+++.++++++++|+.+++++++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 34555554 678899999999999999999996 5 4999999999 999999999999998889999999999888778
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+||+|++..+.+++ .+..++.++.++|||||+++.
T Consensus 185 ~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 185 AVTASWNNESTMYV----DLHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp CEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CEeEEEECCchhhC----CHHHHHHHHHHHcCCCcEEEE
Confidence 99999987553333 288999999999999999984
No 26
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.65 E-value=1.3e-15 Score=131.49 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=86.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-CCCCceeEEEEe
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIIISE 196 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Iv~~ 196 (379)
...++.+|||+|||+|.++..+++. ..+|+|+|+|+ |++.|+++++.+++ +++++++.++..+. +.+++||+|+++
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 3568899999999999999999998 56999999999 99999999999998 67999998888753 335789999987
Q ss_pred cCccccC-------ChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLL-------FENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~-------~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+ ++... .......++.++.++|||||.++.
T Consensus 97 ~-~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 133 (185)
T 3mti_A 97 L-GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAI 133 (185)
T ss_dssp E-C-----------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred C-CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEE
Confidence 3 22221 224556788999999999999984
No 27
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.65 E-value=4.7e-16 Score=141.36 Aligned_cols=105 Identities=17% Similarity=-0.046 Sum_probs=85.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH----------cC------CCCcEEEEEcceee
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA----------NG------FSNVITVLKGKIEE 182 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~----------~~------~~~~i~~~~~d~~~ 182 (379)
..++.+|||+|||+|..+..+++.|. +|+|||+|+ |++.|+++... .+ ...+|+++++|+.+
T Consensus 66 ~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 66 GQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp TCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 35788999999999999999999987 999999999 99999776431 00 12469999999999
Q ss_pred ccCCC-CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 183 IELPV-TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 183 ~~~~~-~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
++.++ ++||+|++..+...+ .......+++++.++|||||+++
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l-~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAI-NPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTS-CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhC-CHHHHHHHHHHHHHHcCCCeEEE
Confidence 88653 799999986543333 34567789999999999999986
No 28
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.64 E-value=3.4e-16 Score=137.68 Aligned_cols=106 Identities=12% Similarity=-0.028 Sum_probs=85.0
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC-----------CCCcEEEEEcceeeccCC
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG-----------FSNVITVLKGKIEEIELP 186 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~-----------~~~~i~~~~~d~~~~~~~ 186 (379)
...++.+|||+|||+|..+..+++.|. +|+|||+|+ |++.|+++..... ...+++++++|+.+++++
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 346788999999999999999999876 999999999 9999998754210 024699999999998765
Q ss_pred C-CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 187 V-TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 187 ~-~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
+ ++||+|++..+.+++ .......+++++.++|||||+++
T Consensus 98 ~~~~fD~v~~~~~l~~l-~~~~~~~~l~~~~r~LkpgG~~~ 137 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIAL-PADMRERYVQHLEALMPQACSGL 137 (203)
T ss_dssp HHHSEEEEEEESCGGGS-CHHHHHHHHHHHHHHSCSEEEEE
T ss_pred cCCCEEEEEECcchhhC-CHHHHHHHHHHHHHHcCCCcEEE
Confidence 4 689999986543333 34556789999999999999844
No 29
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.64 E-value=4.3e-16 Score=136.78 Aligned_cols=104 Identities=17% Similarity=0.215 Sum_probs=87.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcceeeccC--CCCc-eeEEEEe
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEIEL--PVTK-VDIIISE 196 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~--~~~~-~D~Iv~~ 196 (379)
++.+|||+|||+|.+++.++..+..+|+|+|+|+ |++.|++++..+++. ++++++++|+.++.. +.++ ||+|+++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 6789999999999999998887777999999999 999999999999984 579999999988643 2478 9999998
Q ss_pred cCccccCChhhHHHHHHHH--HhcccCCEEEEecC
Q 016992 197 WMGYFLLFENMLNTVLYAR--DKWLVDDGIVLPDK 229 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~--~~~LkpgG~lip~~ 229 (379)
++ +. ......++..+ .++|+|||.++...
T Consensus 133 ~~-~~---~~~~~~~l~~~~~~~~LkpgG~l~i~~ 163 (201)
T 2ift_A 133 PP-FH---FNLAEQAISLLCENNWLKPNALIYVET 163 (201)
T ss_dssp CC-SS---SCHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CC-CC---CccHHHHHHHHHhcCccCCCcEEEEEE
Confidence 75 32 35677888888 67899999998543
No 30
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.63 E-value=1.2e-15 Score=135.23 Aligned_cols=107 Identities=17% Similarity=0.157 Sum_probs=89.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCC----cEEEEEcceeeccCCCCceeEE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSN----VITVLKGKIEEIELPVTKVDII 193 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~----~i~~~~~d~~~~~~~~~~~D~I 193 (379)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++..+++++ +++++++|+...+.+.++||+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V 106 (219)
T 3jwg_A 27 SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAA 106 (219)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEE
T ss_pred hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEE
Confidence 3577899999999999999999864 36999999999 9999999998877754 7999999998777666899999
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++..+..++ ....+..+++++.++|||||.++.
T Consensus 107 ~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i~ 139 (219)
T 3jwg_A 107 TVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIVS 139 (219)
T ss_dssp EEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEEE
T ss_pred EEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEEE
Confidence 987654444 223557999999999999997763
No 31
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.63 E-value=2e-15 Score=139.97 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=94.1
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-CCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-PVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~Iv~~~ 197 (379)
..++.+|||||||+|.++..+++.|..+|+|+|+++ +++.|++++...++..++.++++|+.++++ ++++||+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 467889999999999999999888777999999999 999999999988877789999999998876 468999999875
Q ss_pred Ccccc-CChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 MGYFL-LFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~~~~l-~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.+++ .+...+..++.++.++|||||.++..
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 173 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 43322 45677889999999999999999853
No 32
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.63 E-value=2.8e-15 Score=131.91 Aligned_cols=106 Identities=11% Similarity=0.136 Sum_probs=88.5
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||+|||+|.++..+++. ..+|+|+|+++ +++.|+++++.++++++++++++|+.+.....+.||+
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~ 125 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEA 125 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSE
T ss_pred HHHhcCCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCE
Confidence 333345678899999999999999999998 55999999999 9999999999999976899999999884333368999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|++.. .+ ... ++..+.++|||||+++..
T Consensus 126 v~~~~---~~----~~~-~l~~~~~~LkpgG~lv~~ 153 (204)
T 3njr_A 126 VFIGG---GG----SQA-LYDRLWEWLAPGTRIVAN 153 (204)
T ss_dssp EEECS---CC----CHH-HHHHHHHHSCTTCEEEEE
T ss_pred EEECC---cc----cHH-HHHHHHHhcCCCcEEEEE
Confidence 99754 12 345 899999999999999853
No 33
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.63 E-value=7.4e-16 Score=142.90 Aligned_cols=122 Identities=19% Similarity=0.125 Sum_probs=95.5
Q ss_pred HHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC---CcEEEEEccee
Q 016992 106 RTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS---NVITVLKGKIE 181 (379)
Q Consensus 106 r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~---~~i~~~~~d~~ 181 (379)
+...+.+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+ |++.|++++...+.. .++.+..+|+.
T Consensus 41 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 41 RTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred hHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 3445555565555556788999999999999999999876 999999999 999999887544322 35789999998
Q ss_pred ecc---CCCCceeEEEEe-cCccccCC----hhhHHHHHHHHHhcccCCEEEEec
Q 016992 182 EIE---LPVTKVDIIISE-WMGYFLLF----ENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 182 ~~~---~~~~~~D~Iv~~-~~~~~l~~----~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++ +++++||+|++. .+..++.. ...+..+++++.++|||||+++..
T Consensus 120 ~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 174 (293)
T 3thr_A 120 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID 174 (293)
T ss_dssp GHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred hCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 887 667899999985 33333332 244889999999999999999843
No 34
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.63 E-value=6.3e-15 Score=133.46 Aligned_cols=115 Identities=22% Similarity=0.336 Sum_probs=93.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (379)
+...+.......++.+|||+|||+|.++..+++.|. +|+|+|+|+ |++.|++++...+. +++++++|+.+++++ +
T Consensus 29 ~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~ 104 (252)
T 1wzn_A 29 FVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFK-N 104 (252)
T ss_dssp HHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCC-S
T ss_pred HHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccC-C
Confidence 333344334446778999999999999999999865 999999999 99999999988775 589999999998776 7
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+||+|++............+..++..+.++|+|||.++..
T Consensus 105 ~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 105 EFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp CEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 8999998532223334467789999999999999999854
No 35
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.62 E-value=3.8e-15 Score=132.50 Aligned_cols=116 Identities=19% Similarity=0.234 Sum_probs=95.8
Q ss_pred HHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 106 RTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 106 r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
+.+.+.+.+.... .++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++..++ .+++++++|+.+++
T Consensus 24 ~~~~~~~~l~~~~--~~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~ 98 (227)
T 1ve3_A 24 RIETLEPLLMKYM--KKRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS 98 (227)
T ss_dssp HHHHHHHHHHHSC--CSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC
T ss_pred HHHHHHHHHHHhc--CCCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC
Confidence 3445556666443 3578999999999999999999866 999999999 9999999998877 46999999999887
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++.++||+|++..+ ..+.+...+..++.++.++|+|||.++.
T Consensus 99 ~~~~~~D~v~~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 99 FEDKTFDYVIFIDS-IVHFEPLELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp SCTTCEEEEEEESC-GGGCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCcEEEEEEcCc-hHhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 77689999999764 2234456778999999999999999984
No 36
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.62 E-value=2.9e-15 Score=134.95 Aligned_cols=105 Identities=21% Similarity=0.303 Sum_probs=92.4
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
....++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++...+++ +++++++|++++++++++||+|++.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~ 94 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFDIITCR 94 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEEEEEEE
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEEEEEEC
Confidence 4567899999999999999999998764 999999999 999999999988885 6999999999988877899999987
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+.+ +..++..++.++.++|||||.++.
T Consensus 95 ~~l~---~~~~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 95 YAAH---HFSDVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp SCGG---GCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred Cchh---hccCHHHHHHHHHHHcCCCcEEEE
Confidence 5433 336778999999999999999984
No 37
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.62 E-value=2.3e-15 Score=137.32 Aligned_cols=110 Identities=21% Similarity=0.321 Sum_probs=91.1
Q ss_pred cCCC-CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEE
Q 016992 118 KFLF-KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDII 193 (379)
Q Consensus 118 ~~~~-~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~I 193 (379)
.... ++.+|||+|||+|.+++.+++.+..+|+|+|+++ +++.|++++..+++.++++++++|+.++. ++.++||+|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~I 123 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIV 123 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEE
Confidence 4455 7899999999999999999997666999999999 99999999999999888999999999876 345899999
Q ss_pred EEecCcccc-----CC------------hhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFL-----LF------------ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l-----~~------------~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+++++.+.. .. ...+..++..+.++|||||+++.
T Consensus 124 i~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 124 TCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp EECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 998752221 00 12356799999999999999984
No 38
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.62 E-value=1e-15 Score=131.15 Aligned_cols=104 Identities=20% Similarity=0.239 Sum_probs=86.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Iv~~~ 197 (379)
..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|+++++.+++.++++++++|+.+. +...++||+|++++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 467889999999999999999998777999999999 9999999999999877899999999873 32236799999986
Q ss_pred CccccCChhhHHHHHHHHH--hcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARD--KWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~--~~LkpgG~lip 227 (379)
+ +. ......++..+. ++|+|||.++.
T Consensus 109 ~-~~---~~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 109 P-YA---KETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp S-SH---HHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred C-CC---cchHHHHHHHHHhCCCcCCCcEEEE
Confidence 4 21 244566677776 99999999984
No 39
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.62 E-value=2.4e-15 Score=133.21 Aligned_cols=106 Identities=26% Similarity=0.266 Sum_probs=92.6
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAG--AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g--~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 194 (379)
....++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.|++++...+++ +++++++|+.++++++++||+|+
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIF 111 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEE
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEE
Confidence 445788899999999999999999863 46999999999 999999999999885 69999999999888778999999
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+..+.+++ .+...++.++.++|+|||.++.
T Consensus 112 ~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 112 MAFTFHEL---SEPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp EESCGGGC---SSHHHHHHHHHHHEEEEEEEEE
T ss_pred eehhhhhc---CCHHHHHHHHHHHhCCCeEEEE
Confidence 87653333 5678999999999999999985
No 40
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.62 E-value=5.7e-16 Score=151.72 Aligned_cols=135 Identities=13% Similarity=0.041 Sum_probs=103.9
Q ss_pred hhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHH
Q 016992 85 DYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAK 161 (379)
Q Consensus 85 ~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~ 161 (379)
..|..++...+....|+ +.......+|.+|||+|||+|..+..+|+. +.++|+|+|+++ +++.++
T Consensus 76 ~~~~~G~~~vQd~ss~l------------~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~ 143 (464)
T 3m6w_A 76 PFFYAGLYYIQEPSAQA------------VGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLL 143 (464)
T ss_dssp HHHHTTSEEECCTTTHH------------HHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH
T ss_pred hHHhCCeEEEECHHHHH------------HHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 45666665554444433 222345678999999999999999999984 346999999999 999999
Q ss_pred HHHHHcCCCCcEEEEEcceeeccC-CCCceeEEEEecCccccCC---hh----------------hHHHHHHHHHhcccC
Q 016992 162 QIVEANGFSNVITVLKGKIEEIEL-PVTKVDIIISEWMGYFLLF---EN----------------MLNTVLYARDKWLVD 221 (379)
Q Consensus 162 ~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~Iv~~~~~~~l~~---~~----------------~~~~~l~~~~~~Lkp 221 (379)
++++++|+. |.++++|+.++.. ..++||+|++++++++... .+ ....++..+.++|||
T Consensus 144 ~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 221 (464)
T 3m6w_A 144 ENVERWGAP--LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP 221 (464)
T ss_dssp HHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHcCCe--EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999985 9999999988752 2478999999987654311 01 126789999999999
Q ss_pred CEEEEecCCceE
Q 016992 222 DGIVLPDKASLY 233 (379)
Q Consensus 222 gG~lip~~~~~~ 233 (379)
||+|++++|++.
T Consensus 222 GG~LvysTCs~~ 233 (464)
T 3m6w_A 222 GGVLVYSTCTFA 233 (464)
T ss_dssp EEEEEEEESCCC
T ss_pred CcEEEEEeccCc
Confidence 999999888763
No 41
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=1.2e-15 Score=137.39 Aligned_cols=106 Identities=20% Similarity=0.218 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec--cCCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~Iv~~~ 197 (379)
.+|.+|||||||+|..+..+++.+..+|++||+++ +++.|+++....+ .+++++.+|+.++ .+++++||.|+.+.
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~FD~i~~D~ 136 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYDT 136 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEECC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC--CceEEEeehHHhhcccccccCCceEEEee
Confidence 68899999999999999999987556999999999 9999999988776 4589999998775 35678999999875
Q ss_pred C--ccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 M--GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~--~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+ .+.+.+..+...++.++.|+|||||+|++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 137 YPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 4 233455667889999999999999999853
No 42
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.61 E-value=6.1e-15 Score=135.57 Aligned_cols=102 Identities=14% Similarity=0.247 Sum_probs=87.1
Q ss_pred ccCCCCCCEEEEEcCCCchHH-HHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEE
Q 016992 117 NKFLFKDKVVLDVGAGTGILS-LFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~G~~~-~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 194 (379)
...+.++.+|||||||+|.++ +.+|+....+|+|+|+++ |++.|+++++..|+ ++|+++++|+.+++ +++||+|+
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~--d~~FDvV~ 193 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID--GLEFDVLM 193 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--GCCCSEEE
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--CCCcCEEE
Confidence 356789999999999998665 566774445999999999 99999999999999 78999999999875 48999999
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+... .++...+++++.++|||||+++.
T Consensus 194 ~~a~------~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 194 VAAL------AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp ECTT------CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred ECCC------ccCHHHHHHHHHHHcCCCcEEEE
Confidence 7532 25678999999999999999984
No 43
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.61 E-value=1.9e-15 Score=148.73 Aligned_cols=114 Identities=14% Similarity=0.112 Sum_probs=93.8
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDI 192 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~ 192 (379)
....++.+|||+|||+|..+..+++. +. .+|+|+|+++ +++.++++++++|+. +++++++|+.+++ +++++||+
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~fD~ 333 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGEEVADK 333 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCSSCEEE
T ss_pred cCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhccCCCCE
Confidence 45678899999999999999999984 33 6999999999 999999999999985 5999999998876 44478999
Q ss_pred EEEecCccccCC---hhh----------------HHHHHHHHHhcccCCEEEEecCCce
Q 016992 193 IISEWMGYFLLF---ENM----------------LNTVLYARDKWLVDDGIVLPDKASL 232 (379)
Q Consensus 193 Iv~~~~~~~l~~---~~~----------------~~~~l~~~~~~LkpgG~lip~~~~~ 232 (379)
|++++++++... .++ ...++..+.++|||||.+++++|++
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999877654421 111 1578999999999999999877765
No 44
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.61 E-value=1.6e-15 Score=136.33 Aligned_cols=107 Identities=20% Similarity=0.203 Sum_probs=87.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec--cCCCCceeEEEEe
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISE 196 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~Iv~~ 196 (379)
..++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|+++....+ .+++++++|+.++ ++++++||+|+++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILYD 135 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEEC
Confidence 357889999999999999999887666999999999 9999999887766 4699999999998 7777899999983
Q ss_pred cCc--cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 197 WMG--YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 197 ~~~--~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
... ....+......++.++.++|||||+++..
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 221 11122344567899999999999999854
No 45
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.61 E-value=6.6e-15 Score=129.18 Aligned_cols=107 Identities=19% Similarity=0.239 Sum_probs=90.3
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
+.......++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.|++++..+++ ++++++++|+.+.....++||
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~D 110 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLDDLPDPD 110 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCTTSCCCS
T ss_pred HHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhhcCCCCC
Confidence 4444566788999999999999999999964 57999999999 99999999999998 679999999976544347899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|++.... ..+..++.++.++|+|||+++.
T Consensus 111 ~i~~~~~~------~~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 111 RVFIGGSG------GMLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp EEEESCCT------TCHHHHHHHHHHHCCTTCEEEE
T ss_pred EEEECCCC------cCHHHHHHHHHHhcCCCeEEEE
Confidence 99986532 2577899999999999999984
No 46
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.61 E-value=9.1e-15 Score=127.22 Aligned_cols=105 Identities=19% Similarity=0.217 Sum_probs=90.1
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
....++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++...+++ +++++++|+.++++ .++||+|++.
T Consensus 28 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-~~~~D~v~~~ 104 (199)
T 2xvm_A 28 VKVVKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-DRQYDFILST 104 (199)
T ss_dssp TTTSCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-CCCEEEEEEE
T ss_pred hhccCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-CCCceEEEEc
Confidence 3345778999999999999999999865 999999999 999999999988874 59999999999877 5899999997
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.+.+++ .......++.++.++|||||.++
T Consensus 105 ~~l~~~-~~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 105 VVLMFL-EAKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp SCGGGS-CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred chhhhC-CHHHHHHHHHHHHHhcCCCeEEE
Confidence 654443 23477899999999999999976
No 47
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.61 E-value=4.4e-15 Score=137.20 Aligned_cols=102 Identities=25% Similarity=0.276 Sum_probs=89.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-CCCCceeEEEEecCc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIIISEWMG 199 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Iv~~~~~ 199 (379)
++.+|||||||+|.++..+++.|. +|+|+|+++ +++.|++++...++..+++++++|+.+++ +.+++||+|++..+.
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999999865 999999999 99999999999888778999999999987 556899999987653
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++ ..++..++.++.++|||||.++.
T Consensus 147 ~~---~~~~~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 147 EW---VADPRSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp GG---CSCHHHHHHHHHHTEEEEEEEEE
T ss_pred hc---ccCHHHHHHHHHHHcCCCeEEEE
Confidence 33 36778999999999999999984
No 48
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.61 E-value=2.1e-15 Score=132.44 Aligned_cols=102 Identities=18% Similarity=0.226 Sum_probs=85.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeEEEEecCc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISEWMG 199 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Iv~~~~~ 199 (379)
++.+|||+|||+|.+++.+++.+..+|+|+|+++ |++.|++++..+++ ++++++++|+.+. +...++||+|+++++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p- 131 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPP- 131 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSCCCCEEEEEECCS-
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhcCCCCCEEEECCC-
Confidence 6789999999999999998887777999999999 99999999999998 5799999999874 444578999999865
Q ss_pred cccCChhhHHHHHHHHHh--cccCCEEEEec
Q 016992 200 YFLLFENMLNTVLYARDK--WLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~--~LkpgG~lip~ 228 (379)
+. ......++..+.+ +|+|||+++.+
T Consensus 132 ~~---~~~~~~~l~~l~~~~~L~pgG~l~i~ 159 (202)
T 2fpo_A 132 FR---RGLLEETINLLEDNGWLADEALIYVE 159 (202)
T ss_dssp SS---TTTHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CC---CCcHHHHHHHHHhcCccCCCcEEEEE
Confidence 32 2456677777754 69999999854
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.61 E-value=1.8e-15 Score=141.36 Aligned_cols=118 Identities=11% Similarity=0.106 Sum_probs=97.5
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHH--HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCA--KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la--~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (379)
.|.+.+. ....++.+|||||||+|.++..++ ..+..+|+|+|+++ +++.|++++...++.++++++++|+.++++
T Consensus 107 ~~~~~l~--~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 184 (305)
T 3ocj_A 107 HFRRALQ--RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT 184 (305)
T ss_dssp HHHHHHH--HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC
T ss_pred HHHHHHH--hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc
Confidence 3555553 345788999999999999999985 34556999999999 999999999999988889999999999988
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+ ++||+|++..+.+++........++.++.++|||||+++...
T Consensus 185 ~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 185 R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 7 999999987655555444445568999999999999998643
No 50
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.61 E-value=4.2e-15 Score=129.60 Aligned_cols=108 Identities=16% Similarity=0.207 Sum_probs=90.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-CCCCceeEEE
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDIII 194 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~Iv 194 (379)
...++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.|++++..+++.++++++++|+.++. ...++||+|+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence 3467889999999999999999985 456999999999 99999999999998778999999998875 4458999999
Q ss_pred EecCcc-------ccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 195 SEWMGY-------FLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 195 ~~~~~~-------~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+++. + ..........++.++.++|||||+++.
T Consensus 99 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 99 FNLG-YLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp EEES-BCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EcCC-cccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 9853 2 112233556799999999999999984
No 51
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.60 E-value=5.4e-15 Score=135.86 Aligned_cols=116 Identities=19% Similarity=0.251 Sum_probs=98.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (379)
.+...+.......++.+|||||||+|.++..+++.+ ..+|+|+|+++ +++.|++++...+++ +++++++|+.+++++
T Consensus 24 ~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~ 102 (276)
T 3mgg_A 24 TLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFE 102 (276)
T ss_dssp HHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSC
T ss_pred HHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCC
Confidence 344445555556789999999999999999999963 56999999999 999999999999885 599999999999887
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++||+|++..+.+.+ .++..++.++.++|||||.++..
T Consensus 103 ~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~ 141 (276)
T 3mgg_A 103 DSSFDHIFVCFVLEHL---QSPEEALKSLKKVLKPGGTITVI 141 (276)
T ss_dssp TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEEechhhhc---CCHHHHHHHHHHHcCCCcEEEEE
Confidence 7899999987654433 66789999999999999999853
No 52
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.60 E-value=4.1e-15 Score=134.73 Aligned_cols=116 Identities=18% Similarity=0.188 Sum_probs=94.5
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
.+...+.......++.+|||||||+|.++..+++.+..+|+++|+++ +++.|++++... .+++++++|+.++++++
T Consensus 80 ~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 80 EGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCS
T ss_pred HHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCC
Confidence 34444555555667899999999999999999987667899999999 999999887654 46999999999988777
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++||+|++..+.+++. ..++..++.++.++|||||.++..
T Consensus 157 ~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLT-DADFVKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp SCEEEEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCeEEEEEcchhhhCC-HHHHHHHHHHHHHhcCCCeEEEEE
Confidence 8999999876533332 156789999999999999999854
No 53
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=134.35 Aligned_cols=113 Identities=17% Similarity=0.232 Sum_probs=91.6
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVT 188 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~ 188 (379)
+...+... ..++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|+++... . .+++++++|+.+++++++
T Consensus 32 ~~~~l~~~--~~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~d~~~~~~~~~ 106 (215)
T 2pxx_A 32 FRALLEPE--LRPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--V-PQLRWETMDVRKLDFPSA 106 (215)
T ss_dssp HHHHHGGG--CCTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--C-TTCEEEECCTTSCCSCSS
T ss_pred HHHHHHHh--cCCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEcchhcCCCCCC
Confidence 44455543 367889999999999999999998766999999999 99999988764 2 469999999999887778
Q ss_pred ceeEEEEecCccccC------------ChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLL------------FENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~------------~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+||+|++..+...+. +......++.++.++|||||.++.
T Consensus 107 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 157 (215)
T 2pxx_A 107 SFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFIS 157 (215)
T ss_dssp CEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEE
Confidence 999999875433332 234668999999999999999884
No 54
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.60 E-value=7.6e-15 Score=133.55 Aligned_cols=116 Identities=21% Similarity=0.239 Sum_probs=93.0
Q ss_pred HHHHHHHHHh-ccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 107 TKSYQNVIYQ-NKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 107 ~~~~~~~i~~-~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
...+.+.+.. .....++.+|||+|||+|.++..+++.+ .+|+|+|+|+ +++.|++++ . +...+++++++|+.+++
T Consensus 23 ~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~ 99 (263)
T 2yqz_A 23 AGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIP 99 (263)
T ss_dssp HHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCC
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCC
Confidence 3344444432 2345678899999999999999999885 4999999999 999999987 2 22356999999999988
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++++||+|++..+.+ +..+...++.++.++|||||.++..
T Consensus 100 ~~~~~fD~v~~~~~l~---~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 100 LPDESVHGVIVVHLWH---LVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCTTCEEEEEEESCGG---GCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCeeEEEECCchh---hcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 7778999999875433 3357789999999999999999854
No 55
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.60 E-value=2.2e-15 Score=148.85 Aligned_cols=111 Identities=14% Similarity=0.045 Sum_probs=92.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-CCCceeEEEEec
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-PVTKVDIIISEW 197 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~Iv~~~ 197 (379)
+|.+|||+|||+|..+..+|+. + .++|+|+|+++ +++.++++++++|+. +|.++++|+.++.. ..++||+|++++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 8899999999999999999984 3 46999999999 999999999999985 59999999988753 347899999998
Q ss_pred CccccCC---hh----------------hHHHHHHHHHhcccCCEEEEecCCceE
Q 016992 198 MGYFLLF---EN----------------MLNTVLYARDKWLVDDGIVLPDKASLY 233 (379)
Q Consensus 198 ~~~~l~~---~~----------------~~~~~l~~~~~~LkpgG~lip~~~~~~ 233 (379)
++++... .+ ....++.++.++|||||+|++++|++.
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 7654311 01 124788899999999999999888764
No 56
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.60 E-value=3.1e-15 Score=128.99 Aligned_cols=105 Identities=14% Similarity=0.183 Sum_probs=86.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----CCCceeEEE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVDIII 194 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~Iv 194 (379)
..++.+|||+|||+|.++..+++.+..+|+|+|+++ +++.|++++..+++.++++++++|+.+... +.++||+|+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 357889999999999999999888777999999999 999999999999887789999999987431 247899999
Q ss_pred EecCccccCChhhHHHHHHHH--HhcccCCEEEEec
Q 016992 195 SEWMGYFLLFENMLNTVLYAR--DKWLVDDGIVLPD 228 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~--~~~LkpgG~lip~ 228 (379)
++++ +.. .....++..+ .++|+|||.++..
T Consensus 122 ~~~~-~~~---~~~~~~~~~l~~~~~L~~gG~l~~~ 153 (187)
T 2fhp_A 122 LDPP-YAK---QEIVSQLEKMLERQLLTNEAVIVCE 153 (187)
T ss_dssp ECCC-GGG---CCHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred ECCC-CCc---hhHHHHHHHHHHhcccCCCCEEEEE
Confidence 9865 332 3345566666 8899999999853
No 57
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.60 E-value=1.2e-15 Score=138.87 Aligned_cols=95 Identities=21% Similarity=0.135 Sum_probs=80.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
..+.+|||||||+|.++..+++.+. +|+|||+|+ |++.|++. .+|+++++|++++++++++||+|++....
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~ 109 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPASVDVAIAAQAM 109 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSCEEEEEECSCC
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCcccEEEEeeeh
Confidence 3456999999999999999999865 999999999 99887642 46999999999999998999999986543
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+. -+.+.++.++.|+|||||+|+.
T Consensus 110 h~----~~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 110 HW----FDLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp TT----CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hH----hhHHHHHHHHHHHcCCCCEEEE
Confidence 22 3467899999999999999874
No 58
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.60 E-value=8.6e-15 Score=136.29 Aligned_cols=103 Identities=18% Similarity=0.220 Sum_probs=89.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHH--cCCCEEEEEecHH-HHHHHHHHHHHc-CCCCcEEEEEcceeeccCCC------Cce
Q 016992 121 FKDKVVLDVGAGTGILSLFCAK--AGAAHVYAVECSQ-MANMAKQIVEAN-GFSNVITVLKGKIEEIELPV------TKV 190 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~--~g~~~v~~vD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~------~~~ 190 (379)
.++.+|||||||+|.++..+++ .+..+|+|+|+|+ +++.|++++... +...+++++++|+++++++. ++|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 5788999999999999999997 3567999999999 999999999887 44568999999999988765 799
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|++..+.+++ ++..++.++.++|||||.++.
T Consensus 115 D~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 999997653333 778999999999999999984
No 59
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.59 E-value=2e-15 Score=139.31 Aligned_cols=101 Identities=20% Similarity=0.152 Sum_probs=88.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++.+|||+|||+|.+++.+++.+..+|+|+|+|+ +++.|+++++.+++.++++++++|+.++.. .++||+|+++++
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p 201 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC
T ss_pred CCCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc
Confidence 357899999999999999999998776899999999 999999999999998789999999998876 489999999765
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
. ....++..+.++|||||.++..
T Consensus 202 ~-------~~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 202 V-------RTHEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp S-------SGGGGHHHHHHHEEEEEEEEEE
T ss_pred h-------hHHHHHHHHHHHCCCCeEEEEE
Confidence 2 1246777888999999999843
No 60
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.59 E-value=5.4e-16 Score=141.88 Aligned_cols=110 Identities=12% Similarity=0.110 Sum_probs=85.4
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC----------------------------
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF---------------------------- 169 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~---------------------------- 169 (379)
...++.+|||||||+|.++..++..|+.+|+|+|+|+ |++.|+++++....
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 4567889999999999988888777777899999999 99999987754320
Q ss_pred CCcEE-EEEcceeec-cC---CCCceeEEEEecCcccc-CChhhHHHHHHHHHhcccCCEEEEec
Q 016992 170 SNVIT-VLKGKIEEI-EL---PVTKVDIIISEWMGYFL-LFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 170 ~~~i~-~~~~d~~~~-~~---~~~~~D~Iv~~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..+|. ++++|+.+. ++ ..++||+|++..+.+++ .+..++..++.++.++|||||.|+.+
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 01354 889999874 32 24789999997654433 23356778999999999999999965
No 61
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.59 E-value=1.1e-14 Score=134.73 Aligned_cols=114 Identities=21% Similarity=0.187 Sum_probs=95.0
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
..+.+.......++.+|||||||+|.++..+++ .|. +|+|+|+|+ +++.|++++...++..+++++.+|+.+++
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 444556666677889999999999999999995 665 999999999 99999999998888778999999998764
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++||+|++..+..++. ...+..++.++.++|||||.++..
T Consensus 128 ~~fD~v~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 128 EPVDRIVSIGAFEHFG-HERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp CCCSEEEEESCGGGTC-TTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCeeEEEEeCchhhcC-hHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7899999875433331 156789999999999999999853
No 62
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.59 E-value=3.8e-15 Score=134.02 Aligned_cols=103 Identities=20% Similarity=0.245 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec-C
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW-M 198 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~-~ 198 (379)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ |++.|++++...+. +++++++|+.+++++ ++||+|++.. +
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~~ 111 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNIN-RKFDLITCCLDS 111 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCS-CCEEEEEECTTG
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCcc-CCceEEEEcCcc
Confidence 3778999999999999999999865 899999999 99999999988775 589999999998877 8999999864 4
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+++.....+..++.++.++|||||.++.
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 34444446788999999999999999985
No 63
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.59 E-value=6.4e-15 Score=131.89 Aligned_cols=103 Identities=23% Similarity=0.302 Sum_probs=86.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..++.+|||+|||+|.++..+++. +..+|+|+|+|+ +++.|++++...+ +++++++|+.+++++ ++||+|++..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~-~~fD~v~~~~ 117 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFE-EKYDMVVSAL 117 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCC-SCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCC-CCceEEEEeC
Confidence 567889999999999999999996 356999999999 9999999876554 699999999999887 8999999976
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.+++ .......+++++.++|||||.++.
T Consensus 118 ~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 146 (234)
T 3dtn_A 118 SIHHL-EDEDKKELYKRSYSILKESGIFIN 146 (234)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 54444 223334699999999999999984
No 64
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.59 E-value=5.2e-15 Score=141.01 Aligned_cols=113 Identities=19% Similarity=0.265 Sum_probs=91.3
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHH-------HHcCCC-CcEEEEEccee
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIV-------EANGFS-NVITVLKGKIE 181 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~-------~~~~~~-~~i~~~~~d~~ 181 (379)
..+.....+.++.+|||||||+|.+++.+|. .|..+|+|||+++ ++++|++++ ..+|+. ++|+|+++|+.
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 3344556678999999999999999999987 5777899999999 999998765 345663 67999999999
Q ss_pred eccCCC--CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 182 EIELPV--TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 182 ~~~~~~--~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++++++ ..||+|+++.+. +.+++...|.++.+.|||||+||..
T Consensus 243 ~lp~~d~~~~aDVVf~Nn~~----F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 243 SEEWRERIANTSVIFVNNFA----FGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp SHHHHHHHHTCSEEEECCTT----CCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCccccccCCccEEEEcccc----cCchHHHHHHHHHHcCCCCcEEEEe
Confidence 887642 479999987542 2367788889999999999999944
No 65
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.59 E-value=4.2e-15 Score=135.39 Aligned_cols=114 Identities=26% Similarity=0.306 Sum_probs=93.4
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 111 ~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
.+.+.......++.+|||||||+|.++..+++....+|+|+|+|+ +++.|++++... .+++++++|+.++++++++
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~ 120 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPENN 120 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTTC
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCCc
Confidence 344555566778899999999999999999995234999999999 999999876544 4699999999998887799
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
||+|++..+.+++ ...++..++.++.++|||||.++..
T Consensus 121 fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 121 FDLIYSRDAILAL-SLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp EEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeHHHHHHhc-ChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9999986543322 1278889999999999999999853
No 66
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.59 E-value=4.4e-15 Score=138.54 Aligned_cols=108 Identities=14% Similarity=0.076 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-----cEEEEEcce------eecc--CC
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-----VITVLKGKI------EEIE--LP 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~-----~i~~~~~d~------~~~~--~~ 186 (379)
.++.+|||||||+|..+..+++.+..+|+|+|+|+ |++.|+++....+... ++++++.|+ .+++ ++
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 35789999999999876666666666999999999 9999999987765421 267888887 4332 34
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++||+|+|..+.+++........+++++.++|||||+++..
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~ 168 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLIT 168 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 579999998755444333335689999999999999999854
No 67
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.58 E-value=7.1e-15 Score=132.51 Aligned_cols=99 Identities=19% Similarity=0.185 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC---CCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---VTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~Iv~ 195 (379)
.++.+|||||||+|.+++.++. .+..+|+|+|+|+ |++.|++++..++++ +++++++|+.+++.+ .++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEE
Confidence 4678999999999999999997 3456999999999 999999999999985 499999999988753 478999998
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+ ..+..++..+.++|+|||.++.
T Consensus 148 ~~~-------~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 148 RAV-------ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp ECC-------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred ecc-------CCHHHHHHHHHHhcCCCCEEEE
Confidence 653 4578999999999999999984
No 68
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.58 E-value=4.7e-15 Score=145.13 Aligned_cols=113 Identities=17% Similarity=0.056 Sum_probs=92.5
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDII 193 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~I 193 (379)
....++.+|||+|||+|..+..+++.+ ..+|+|+|+++ +++.+++++..+|+. ++++++|+.+++ ++.++||+|
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~~~~~~~~~fD~V 319 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRI 319 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCTHHHHTTCCEEEE
T ss_pred cCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhchhhcccCCCCEE
Confidence 446788999999999999999999953 36999999999 999999999999973 789999998775 444789999
Q ss_pred EEecCccccCC---hhh----------------HHHHHHHHHhcccCCEEEEecCCce
Q 016992 194 ISEWMGYFLLF---ENM----------------LNTVLYARDKWLVDDGIVLPDKASL 232 (379)
Q Consensus 194 v~~~~~~~l~~---~~~----------------~~~~l~~~~~~LkpgG~lip~~~~~ 232 (379)
++++++++... .++ ...++..+.++|||||++++++|++
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 99876654321 111 1478999999999999999877765
No 69
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.58 E-value=8.1e-15 Score=130.88 Aligned_cols=106 Identities=14% Similarity=0.166 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEcceeeccCCCCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++...++ .+++.++++|+..+++++++||+|++
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 5788999999999999999999865 999999999 99999999887776 24689999999998887789999999
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+.+.+........+++++.++|+|||.++.
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 76655554444455899999999999999984
No 70
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.58 E-value=7.2e-15 Score=133.33 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=86.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC---CCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---VTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~Iv~ 195 (379)
.++.+|||||||+|.+++.++.. +..+|+++|+++ +++.|++++..+++.+ |+++++|++++... .++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhcccccCCCceEEEE
Confidence 56789999999999999999985 667999999999 9999999999999964 99999999988642 378999999
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+ ..+..++..+.++|||||+++.
T Consensus 158 ~a~-------~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 158 RAV-------APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp ESS-------CCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCc-------CCHHHHHHHHHHHcCCCeEEEE
Confidence 754 3467899999999999999883
No 71
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.58 E-value=1.3e-14 Score=129.19 Aligned_cols=118 Identities=11% Similarity=0.149 Sum_probs=94.0
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcceeec
Q 016992 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEI 183 (379)
Q Consensus 108 ~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~ 183 (379)
..+...+.......++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|+++++.+|+. ++|+++++|+.++
T Consensus 42 ~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~ 121 (221)
T 3dr5_A 42 GQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV 121 (221)
T ss_dssp HHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH
T ss_pred HHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH
Confidence 344455554444344569999999999999999984 3 46999999999 999999999999997 7899999999876
Q ss_pred c--CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 184 E--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 184 ~--~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
. ++.++||+|+++.. ......++..+.++|||||+++.....
T Consensus 122 l~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 122 MSRLANDSYQLVFGQVS------PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp GGGSCTTCEEEEEECCC------TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HHHhcCCCcCeEEEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3 33589999998642 144567899999999999999965543
No 72
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.58 E-value=1.2e-14 Score=134.39 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=89.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||+|||+|.++..+++.|. +|+|+|+|+ +++.|++++..+++ +++++++|+.+++. .++||+|++..+.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-~~~fD~i~~~~~~ 194 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-QENYDFIVSTVVF 194 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-CSCEEEEEECSSG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-cCCccEEEEccch
Confidence 4788999999999999999999876 999999999 99999999999887 69999999999877 4899999998764
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
+++ .......++.++.++|+|||.++
T Consensus 195 ~~~-~~~~~~~~l~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 195 MFL-NRERVPSIIKNMKEHTNVGGYNL 220 (286)
T ss_dssp GGS-CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred hhC-CHHHHHHHHHHHHHhcCCCcEEE
Confidence 443 34567899999999999999977
No 73
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.58 E-value=1.8e-14 Score=135.25 Aligned_cols=114 Identities=16% Similarity=0.086 Sum_probs=95.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (379)
...+.+.......++.+|||||||+|.++..+++. |. +|+|+|+|+ +++.|++++...++.++++++++|+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 153 (318)
T 2fk8_A 77 AKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA-- 153 (318)
T ss_dssp HHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--
T ss_pred HHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--
Confidence 34445666666778999999999999999999985 66 999999999 99999999999888778999999998774
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++||+|++..+..++ ...++..++.++.++|||||.++.
T Consensus 154 -~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 154 -EPVDRIVSIEAFEHF-GHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp -CCCSEEEEESCGGGT-CGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred -CCcCEEEEeChHHhc-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 789999987543333 125788999999999999999984
No 74
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.58 E-value=4.2e-15 Score=138.07 Aligned_cols=107 Identities=18% Similarity=0.253 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCC-----------------------------
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGF----------------------------- 169 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~----------------------------- 169 (379)
.++++|||||||+|.+++.+++. +..+|+|||+++ |++.|++++...+.
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 47889999999999999999995 667999999999 99999998776542
Q ss_pred ----------------------------CCcEEEEEcceeecc-----CCCCceeEEEEecCccccC---ChhhHHHHHH
Q 016992 170 ----------------------------SNVITVLKGKIEEIE-----LPVTKVDIIISEWMGYFLL---FENMLNTVLY 213 (379)
Q Consensus 170 ----------------------------~~~i~~~~~d~~~~~-----~~~~~~D~Iv~~~~~~~l~---~~~~~~~~l~ 213 (379)
+.+|+++++|+.... +..++||+|+|..+..+++ +...+..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 257999999998654 3458999999976543332 3447789999
Q ss_pred HHHhcccCCEEEEe
Q 016992 214 ARDKWLVDDGIVLP 227 (379)
Q Consensus 214 ~~~~~LkpgG~lip 227 (379)
.+.++|+|||+|+.
T Consensus 205 ~~~~~LkpGG~lil 218 (292)
T 3g07_A 205 RIYRHLRPGGILVL 218 (292)
T ss_dssp HHHHHEEEEEEEEE
T ss_pred HHHHHhCCCcEEEE
Confidence 99999999999984
No 75
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.58 E-value=6.1e-15 Score=126.07 Aligned_cols=108 Identities=16% Similarity=0.103 Sum_probs=86.3
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-ccCCCC
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IELPVT 188 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~ 188 (379)
..+.......++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++..+++++++ ++++|+.+ ++...+
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~ 93 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPD 93 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCS
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCC
Confidence 33444455678889999999999999999985 457999999999 999999999999987678 88888754 322227
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+||+|++... +.+ ..+++.+.++|||||.++.
T Consensus 94 ~~D~i~~~~~---~~~----~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 94 NPDVIFIGGG---LTA----PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp CCSEEEECC----TTC----TTHHHHHHHTCCTTCEEEE
T ss_pred CCCEEEECCc---ccH----HHHHHHHHHhcCCCCEEEE
Confidence 8999997543 222 5788899999999999984
No 76
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.57 E-value=1.5e-14 Score=129.94 Aligned_cols=112 Identities=23% Similarity=0.316 Sum_probs=92.4
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
.+.+.+... ..++.+|||+|||+|.++..+++. .+|+|+|+|+ +++.|++++...+ .+++++++|+.+++++
T Consensus 22 ~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~- 94 (243)
T 3d2l_A 22 EWVAWVLEQ--VEPGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELELP- 94 (243)
T ss_dssp HHHHHHHHH--SCTTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCCS-
T ss_pred HHHHHHHHH--cCCCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCCC-
Confidence 445555543 346789999999999999999887 5999999999 9999999998876 3589999999998776
Q ss_pred CceeEEEEec-CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEW-MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++||+|++.. +.+++.....+..+++++.++|+|||.++.
T Consensus 95 ~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 8999999853 334444456788999999999999999985
No 77
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.57 E-value=8.8e-15 Score=128.53 Aligned_cols=105 Identities=20% Similarity=0.269 Sum_probs=85.8
Q ss_pred CCCCCEEEEEcCCCchHH-HHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILS-LFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~-~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..++.+|||+|||+|.++ ..+++.+. +|+|+|+|+ +++.|++++...+ .+++++++|+.++++++++||+|++..
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~ 97 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN--FKLNISKGDIRKLPFKDESMSFVYSYG 97 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT--CCCCEEECCTTSCCSCTTCEEEEEECS
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEECchhhCCCCCCceeEEEEcC
Confidence 356789999999999874 44455554 999999999 9999999988776 358999999999887778999999865
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.+++ ...++..++.++.++|||||.++..
T Consensus 98 ~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 127 (209)
T 2p8j_A 98 TIFHM-RKNDVKEAIDEIKRVLKPGGLACIN 127 (209)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hHHhC-CHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 43333 2367889999999999999999853
No 78
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.57 E-value=1.1e-14 Score=130.88 Aligned_cols=108 Identities=18% Similarity=0.235 Sum_probs=89.9
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||||||+|.++..+++.|..+|+|+|+++ +++.|+++... .+++++++|+.+++++.++||+
T Consensus 35 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~ 110 (243)
T 3bkw_A 35 LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDL 110 (243)
T ss_dssp HHHHSCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEE
T ss_pred HHHhccccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceE
Confidence 344445567889999999999999999998766999999999 99999886543 3599999999998877789999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|++..+ +.+..++..++.++.++|+|||.++..
T Consensus 111 v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~~~ 143 (243)
T 3bkw_A 111 AYSSLA---LHYVEDVARLFRTVHQALSPGGHFVFS 143 (243)
T ss_dssp EEEESC---GGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecc---ccccchHHHHHHHHHHhcCcCcEEEEE
Confidence 998754 333357889999999999999999853
No 79
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.56 E-value=7.3e-15 Score=132.22 Aligned_cols=97 Identities=19% Similarity=0.242 Sum_probs=83.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++... +++++++|+.++ .++++||+|++..+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~-~~~~~fD~v~~~~~- 112 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDA-QLPRRYDNIVLTHV- 112 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGC-CCSSCEEEEEEESC-
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHc-CcCCcccEEEEhhH-
Confidence 5678999999999999999998865 899999999 99999987542 599999999988 45589999998755
Q ss_pred cccCChhhHHHHHHHHH-hcccCCEEEEe
Q 016992 200 YFLLFENMLNTVLYARD-KWLVDDGIVLP 227 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~-~~LkpgG~lip 227 (379)
+.+..++..+++++. ++|||||.++.
T Consensus 113 --l~~~~~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 113 --LEHIDDPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp --GGGCSSHHHHHHHHHHTTEEEEEEEEE
T ss_pred --HHhhcCHHHHHHHHHHHhcCCCCEEEE
Confidence 444467789999999 99999999985
No 80
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.56 E-value=8.9e-15 Score=131.77 Aligned_cols=104 Identities=20% Similarity=0.216 Sum_probs=87.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCcc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~ 200 (379)
++.+|||||||+|.++..+++.+..+|+|+|+++ +++.|++++...+. .+++++++|+.+++++.++||+|++..+.+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 6889999999999999998887667999999999 99999998876642 469999999999887767899999876533
Q ss_pred ccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 201 FLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++. ...+..++.++.++|||||+++.
T Consensus 158 ~~~-~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 158 HLT-DQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp GSC-HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hCC-HHHHHHHHHHHHHhcCCCeEEEE
Confidence 332 23356899999999999999985
No 81
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.56 E-value=2.9e-14 Score=123.23 Aligned_cols=110 Identities=21% Similarity=0.277 Sum_probs=90.5
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcceeeccCCCCcee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D 191 (379)
+.......++.+|||+|||+|.++..+++. ..+|+|+|+++ +++.|++++..+++.+ +++++++|+.+.. +.++||
T Consensus 44 l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D 121 (194)
T 1dus_A 44 LVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV-KDRKYN 121 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC-TTSCEE
T ss_pred HHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc-ccCCce
Confidence 333345568889999999999999999988 55999999999 9999999999988854 5999999998743 347899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+++.+.+ ........++..+.++|+|||.++.
T Consensus 122 ~v~~~~~~~--~~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 122 KIITNPPIR--AGKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp EEEECCCST--TCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCCcc--cchhHHHHHHHHHHHHcCCCCEEEE
Confidence 999976422 1235678999999999999999984
No 82
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.56 E-value=5.7e-15 Score=132.79 Aligned_cols=100 Identities=21% Similarity=0.250 Sum_probs=86.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||||||+|.++..+++.+. +|+|+|+++ +++.|+++. ...+++++++|+.++++++++||+|++..+
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~- 125 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEAIMAINS- 125 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEEEEEESC-
T ss_pred CCCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccEEEEcCh-
Confidence 5788999999999999999999865 999999999 999998764 225699999999999887799999998654
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.+..++..++.++.++|+|||.++..
T Consensus 126 --l~~~~~~~~~l~~~~~~L~pgG~l~i~ 152 (242)
T 3l8d_A 126 --LEWTEEPLRALNEIKRVLKSDGYACIA 152 (242)
T ss_dssp --TTSSSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred --HhhccCHHHHHHHHHHHhCCCeEEEEE
Confidence 444477789999999999999999843
No 83
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.56 E-value=5.5e-15 Score=137.58 Aligned_cols=105 Identities=18% Similarity=0.164 Sum_probs=86.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC--CcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS--NVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|++++...++. .+++++++|+.+++++ ++||+|++...
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~ 159 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD-KRFGTVVISSG 159 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS-CCEEEEEECHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC-CCcCEEEECCc
Confidence 344999999999999999999865 899999999 999999999876642 4699999999998874 89999986422
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
............+++++.++|||||.++..
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 189 (299)
T 3g2m_A 160 SINELDEADRRGLYASVREHLEPGGKFLLS 189 (299)
T ss_dssp HHTTSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 222333346789999999999999999853
No 84
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.55 E-value=1.2e-14 Score=132.82 Aligned_cols=109 Identities=25% Similarity=0.225 Sum_probs=89.0
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHH---cCCCCcEEEEEcceeecc-------C
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEA---NGFSNVITVLKGKIEEIE-------L 185 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~---~~~~~~i~~~~~d~~~~~-------~ 185 (379)
....++.+|||+|||+|.+++.+++.. ..+|+|||+++ +++.|++++.. +++.++++++++|+.++. +
T Consensus 32 ~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~ 111 (260)
T 2ozv_A 32 VADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGL 111 (260)
T ss_dssp CCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTC
T ss_pred hcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhcc
Confidence 445678899999999999999999863 46999999999 99999999998 888778999999998872 4
Q ss_pred CCCceeEEEEecCccccCC----------------hhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLF----------------ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~----------------~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.++||+|+++++ |+... ...+..++..+.++|||||.++.
T Consensus 112 ~~~~fD~Vv~nPP-y~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 112 PDEHFHHVIMNPP-YNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp CTTCEEEEEECCC-C---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCcCEEEECCC-CcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999864 33221 12367889999999999999873
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.55 E-value=3.6e-14 Score=125.55 Aligned_cols=106 Identities=16% Similarity=0.165 Sum_probs=86.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEEEEe
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISE 196 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~Iv~~ 196 (379)
.++.+|||||||+|.++..+++. +..+|+|+|+++ +++.|++++..+++ .+++++++|+.+++ ++.++||+|++.
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 35789999999999999999985 456999999999 99999999999998 57999999999876 666789999987
Q ss_pred cCccccC--Ch---hhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLL--FE---NMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~--~~---~~~~~~l~~~~~~LkpgG~lip 227 (379)
....... ++ .....++..+.++|+|||.++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 119 FSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEE
Confidence 5422111 00 0236789999999999999884
No 86
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.55 E-value=2.3e-14 Score=126.24 Aligned_cols=94 Identities=22% Similarity=0.241 Sum_probs=80.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCcc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~ 200 (379)
++.+|||+|||+|.++..+ +..+|+|+|+++ +++.|+++. .++.++++|+.++++++++||+|++..+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~-- 104 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLLFTT-- 104 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEEESC--
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEEcCh--
Confidence 7889999999999998877 555999999999 999998875 3488999999998887789999998654
Q ss_pred ccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 201 FLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.+..++..++.++.++|||||.++.
T Consensus 105 -l~~~~~~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 105 -LEFVEDVERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp -TTTCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -hhhcCCHHHHHHHHHHHcCCCCEEEE
Confidence 34446788999999999999999984
No 87
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=3.5e-14 Score=126.80 Aligned_cols=107 Identities=24% Similarity=0.232 Sum_probs=86.6
Q ss_pred CCCCCCEEEEEcCC-CchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeEEEE
Q 016992 119 FLFKDKVVLDVGAG-TGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIIS 195 (379)
Q Consensus 119 ~~~~~~~VLDlGcG-~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Iv~ 195 (379)
...++.+|||+||| +|.++..+++.+..+|+|+|+++ +++.|++++..+++ +++++++|+..+ ++++++||+|++
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhhcccCceeEEEE
Confidence 34688999999999 99999999997345999999999 99999999999987 599999997544 244589999999
Q ss_pred ecCcccc----------------CChhhHHHHHHHHHhcccCCEEEEe
Q 016992 196 EWMGYFL----------------LFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 196 ~~~~~~l----------------~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+++.+.. .+...+..++..+.++|||||+++.
T Consensus 130 npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 130 APPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp CCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 8642211 1123357899999999999999884
No 88
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.55 E-value=3.1e-14 Score=124.46 Aligned_cols=100 Identities=21% Similarity=0.245 Sum_probs=87.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++ +|||+|||+|.++..+++.|. +|+|+|+++ +++.|++++...+. ++.++++|+.++++++++||+|++...
T Consensus 29 ~~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~- 103 (202)
T 2kw5_A 29 PQG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEGIVSIFC- 103 (202)
T ss_dssp CSS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSEEEEECC-
T ss_pred CCC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccEEEEEhh-
Confidence 456 999999999999999998865 999999999 99999999988776 599999999998877789999998532
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.........++.++.++|||||.++.
T Consensus 104 --~~~~~~~~~~l~~~~~~L~pgG~l~~ 129 (202)
T 2kw5_A 104 --HLPSSLRQQLYPKVYQGLKPGGVFIL 129 (202)
T ss_dssp --CCCHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred --cCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 22446788999999999999999984
No 89
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.55 E-value=2.9e-14 Score=131.82 Aligned_cols=107 Identities=20% Similarity=0.209 Sum_probs=90.9
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 194 (379)
....++.+|||||||+|.++..+++. + ..+|+|+|+|+ +++.|++++...+. +++++++|+.+++++ ++||+|+
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~fD~v~ 94 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELN-DKYDIAI 94 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCS-SCEEEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcC-CCeeEEE
Confidence 34568899999999999999999985 3 36999999999 99999999887664 699999999998875 7999999
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
+..+.. +..+...++.++.++|||||+++....
T Consensus 95 ~~~~l~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 127 (284)
T 3gu3_A 95 CHAFLL---HMTTPETMLQKMIHSVKKGGKIICFEP 127 (284)
T ss_dssp EESCGG---GCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECChhh---cCCCHHHHHHHHHHHcCCCCEEEEEec
Confidence 976533 346778999999999999999985443
No 90
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.55 E-value=2.7e-14 Score=133.28 Aligned_cols=138 Identities=11% Similarity=-0.028 Sum_probs=100.7
Q ss_pred ccchhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHH
Q 016992 82 TSADYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MAN 158 (379)
Q Consensus 82 ~~~~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~ 158 (379)
.....|..++...+....|+ +...+...+|.+|||+|||+|..+..+++. +.++|+|+|+++ +++
T Consensus 74 ~~~~~~~~G~~~~Qd~~s~l------------~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~ 141 (309)
T 2b9e_A 74 HEHPLYRAGHLILQDRASCL------------PAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLA 141 (309)
T ss_dssp TTSHHHHTTSEEECCTGGGH------------HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred ccChHHHCCeEEEECHHHHH------------HHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHH
Confidence 33345666665544444443 222345678999999999999999999984 457999999999 999
Q ss_pred HHHHHHHHcCCCCcEEEEEcceeeccCCC---CceeEEEEecCccccCCh--------------hh-------HHHHHHH
Q 016992 159 MAKQIVEANGFSNVITVLKGKIEEIELPV---TKVDIIISEWMGYFLLFE--------------NM-------LNTVLYA 214 (379)
Q Consensus 159 ~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~D~Iv~~~~~~~l~~~--------------~~-------~~~~l~~ 214 (379)
.++++++++|+. +++++++|+.++.... .+||.|++++++++.... .. ...+|..
T Consensus 142 ~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~ 220 (309)
T 2b9e_A 142 SMATLLARAGVS-CCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCH 220 (309)
T ss_dssp HHHHHHHHTTCC-SEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-eEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHH
Confidence 999999999984 6999999998875432 479999998765443110 01 1246777
Q ss_pred HHhcccCCEEEEecCCceE
Q 016992 215 RDKWLVDDGIVLPDKASLY 233 (379)
Q Consensus 215 ~~~~LkpgG~lip~~~~~~ 233 (379)
..++|+ ||++++++|++.
T Consensus 221 a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 221 ALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp HTTCTT-CCEEEEEESCCC
T ss_pred HHhccC-CCEEEEECCCCC
Confidence 778887 999998888763
No 91
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.55 E-value=2e-14 Score=127.71 Aligned_cols=105 Identities=14% Similarity=0.129 Sum_probs=84.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-c--CCCCceeEEEEe
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E--LPVTKVDIIISE 196 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~~D~Iv~~ 196 (379)
++.+|||||||+|.++..+|+. +...|+|||+++ +++.|++++..+++. +++++++|+.++ + +++++||.|++.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 6779999999999999999985 456899999999 999999999999985 599999999885 3 566899999986
Q ss_pred cCccccCChhh-----HHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENM-----LNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~-----~~~~l~~~~~~LkpgG~lip 227 (379)
........... .+.++..+.++|||||.++.
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i 148 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHM 148 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE
Confidence 33221111010 13589999999999999884
No 92
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.54 E-value=2.3e-14 Score=127.43 Aligned_cols=107 Identities=20% Similarity=0.301 Sum_probs=85.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-c-CC----CCcee
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E-LP----VTKVD 191 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~~----~~~~D 191 (379)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|++++..+++.++|+++++|+.+. + +. .++||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 46789999999999999999984 2 46999999999 9999999999999988899999998664 2 22 16899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
+|+++.... +......++..+ ++|||||+++...+.
T Consensus 137 ~V~~d~~~~---~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 137 MVFLDHWKD---RYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEEECSCGG---GHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEEcCCcc---cchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 999875322 223334566666 999999999976544
No 93
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.54 E-value=1.3e-14 Score=130.04 Aligned_cols=103 Identities=15% Similarity=0.066 Sum_probs=86.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCcc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~ 200 (379)
++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++...+...+++++++|+.+++.. ++||+|++..+.+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT-ELFDLIFDYVFFC 143 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS-SCEEEEEEESSTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCC-CCeeEEEEChhhh
Confidence 445999999999999999987654 899999999 9999999988766557799999999987744 7999999876544
Q ss_pred ccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 201 FLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+ .......++.++.++|||||.++.
T Consensus 144 ~~-~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 144 AI-EPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp TS-CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred cC-CHHHHHHHHHHHHHHCCCCcEEEE
Confidence 33 234788999999999999999984
No 94
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.54 E-value=1.4e-14 Score=128.33 Aligned_cols=98 Identities=27% Similarity=0.327 Sum_probs=83.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++. .+++++++|+.+++++ ++||+|++..+.
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l 116 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-TSIDTIVSTYAF 116 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC-SCCSEEEEESCG
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC-CCeEEEEECcch
Confidence 4788999999999999999999865 999999999 9999998754 3589999999999887 899999997654
Q ss_pred cccCChhhHHH--HHHHHHhcccCCEEEEec
Q 016992 200 YFLLFENMLNT--VLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~--~l~~~~~~LkpgG~lip~ 228 (379)
+++ ..... ++.++.++|||||.++..
T Consensus 117 ~~~---~~~~~~~~l~~~~~~LkpgG~l~i~ 144 (220)
T 3hnr_A 117 HHL---TDDEKNVAIAKYSQLLNKGGKIVFA 144 (220)
T ss_dssp GGS---CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred hcC---ChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 433 44444 999999999999999853
No 95
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=3e-14 Score=127.75 Aligned_cols=102 Identities=23% Similarity=0.279 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC--CCCceeEEEEe
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--PVTKVDIIISE 196 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~D~Iv~~ 196 (379)
.++.+|||||||+|..+..+++. +..+|+++|+++ +++.|+++++..++.++++++++|+.+... ..++||+|+++
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~ 149 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFID 149 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEE
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEc
Confidence 46789999999999999999984 357999999999 999999999999998789999999987522 14889999986
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.. ......++..+.++|||||+++..
T Consensus 150 ~~------~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 150 AA------KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp TT------SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred Cc------HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 42 144678999999999999999853
No 96
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=3.2e-14 Score=128.95 Aligned_cols=103 Identities=16% Similarity=0.226 Sum_probs=87.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCC--CCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELP--VTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~~D~Iv 194 (379)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++|+++++|+.+. +.. .++||+|+
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 46789999999999999999985 3 57999999999 9999999999999988899999999773 321 24899999
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
++.. ......++..+.++|||||+++...
T Consensus 142 ~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 142 IDAD------KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp ECSC------GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred ECCc------hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 8642 2456788999999999999998543
No 97
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.54 E-value=3.4e-14 Score=126.21 Aligned_cols=102 Identities=21% Similarity=0.176 Sum_probs=87.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..+|.+|||||||+|.+++.+++.+ +.+|+|+|+++ +++.|+++++.+|+.++|+++++|..+...+.++||+|+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 4578899999999999999999975 56899999999 999999999999998899999999988765534799988644
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
|+. ..+..++......|+++|.||
T Consensus 99 mGg-----~lI~~IL~~~~~~l~~~~~lI 122 (230)
T 3lec_A 99 MGG-----RLIADILNNDIDKLQHVKTLV 122 (230)
T ss_dssp ECH-----HHHHHHHHHTGGGGTTCCEEE
T ss_pred Cch-----HHHHHHHHHHHHHhCcCCEEE
Confidence 431 457788999999999999998
No 98
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.54 E-value=1.8e-14 Score=140.88 Aligned_cols=136 Identities=17% Similarity=0.032 Sum_probs=105.0
Q ss_pred hhhhhccCcchhhHHhhcCHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHH
Q 016992 85 DYYFDSYSHFGIHEEMLKDVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAK 161 (379)
Q Consensus 85 ~~y~~~~~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~ 161 (379)
..|..++...+....|+ +...+...+|.+|||+|||+|..+..+|+. +.++|+|+|+++ +++.++
T Consensus 80 ~~~~~G~~~vQd~ss~l------------~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~ 147 (456)
T 3m4x_A 80 FLHQAGYEYSQEPSAMI------------VGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILS 147 (456)
T ss_dssp HHHHTTSCEECCTTTHH------------HHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHH
T ss_pred hHHhCCcEEEECHHHHH------------HHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHH
Confidence 45666665555444443 223345678999999999999999999984 346999999999 999999
Q ss_pred HHHHHcCCCCcEEEEEcceeeccC-CCCceeEEEEecCccccCC---hh----------------hHHHHHHHHHhcccC
Q 016992 162 QIVEANGFSNVITVLKGKIEEIEL-PVTKVDIIISEWMGYFLLF---EN----------------MLNTVLYARDKWLVD 221 (379)
Q Consensus 162 ~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~Iv~~~~~~~l~~---~~----------------~~~~~l~~~~~~Lkp 221 (379)
++++++|+. +|.++++|+.++.. ..++||+|++++++++... .+ ....++..+.++|||
T Consensus 148 ~n~~r~g~~-nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp 226 (456)
T 3m4x_A 148 ENIERWGVS-NAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN 226 (456)
T ss_dssp HHHHHHTCS-SEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE
T ss_pred HHHHHcCCC-ceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999995 59999999988751 2378999999987654321 11 113788999999999
Q ss_pred CEEEEecCCceE
Q 016992 222 DGIVLPDKASLY 233 (379)
Q Consensus 222 gG~lip~~~~~~ 233 (379)
||.|++++|++.
T Consensus 227 GG~LvYsTCs~~ 238 (456)
T 3m4x_A 227 KGQLIYSTCTFA 238 (456)
T ss_dssp EEEEEEEESCCC
T ss_pred CcEEEEEEeecc
Confidence 999999988764
No 99
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.54 E-value=2e-14 Score=131.16 Aligned_cols=100 Identities=21% Similarity=0.225 Sum_probs=85.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec-C
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW-M 198 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~-~ 198 (379)
.++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++. +++++++|+.++++ +++||+|++.. +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-~~~fD~v~~~~~~ 120 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-GRRFSAVTCMFSS 120 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-SCCEEEEEECTTG
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-cCCcCEEEEcCch
Confidence 4678999999999999999999865 999999999 9999998743 58999999999877 48999999864 4
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..++.....+..+++++.++|||||.++..
T Consensus 121 l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 121 IGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp GGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 444444457789999999999999999965
No 100
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.54 E-value=1.3e-14 Score=132.94 Aligned_cols=99 Identities=20% Similarity=0.165 Sum_probs=86.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..+|.+|||+|||+|.+++.+|+.|+++|+|+|+++ +++.++++++.|++.++|+++++|+.++... +.||.|+++++
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~-~~~D~Vi~~~p 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE-NIADRILMGYV 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC-SCEEEEEECCC
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc-cCCCEEEECCC
Confidence 468999999999999999999999888999999999 9999999999999999999999999988654 88999998865
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.+. ..++..+.++||+||++.
T Consensus 202 ~~~-------~~~l~~a~~~lk~gG~ih 222 (278)
T 3k6r_A 202 VRT-------HEFIPKALSIAKDGAIIH 222 (278)
T ss_dssp SSG-------GGGHHHHHHHEEEEEEEE
T ss_pred CcH-------HHHHHHHHHHcCCCCEEE
Confidence 332 234556668899999886
No 101
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.53 E-value=1.8e-14 Score=136.03 Aligned_cols=105 Identities=23% Similarity=0.153 Sum_probs=88.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcceeeccCC----CCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIELP----VTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~----~~~~D~Iv 194 (379)
.++.+|||+|||+|.+++.+++.|+ +|++||+|+ +++.|++++..+++.+ +++++++|+.++... .++||+|+
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 4678999999999999999999887 999999999 9999999999999865 599999999876421 36899999
Q ss_pred EecCccccC-------ChhhHHHHHHHHHhcccCCEEEE
Q 016992 195 SEWMGYFLL-------FENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 195 ~~~~~~~l~-------~~~~~~~~l~~~~~~LkpgG~li 226 (379)
++++.+... ....+..++..+.++|+|||.++
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~ll 269 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGL 269 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEE
Confidence 987644322 23456788999999999999966
No 102
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.53 E-value=4.1e-14 Score=124.10 Aligned_cols=99 Identities=29% Similarity=0.402 Sum_probs=86.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++..+++.+ ++++++|+.+.. .++||+|++..+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--~~~fD~i~~~~~ 134 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV--DGKFDLIVANIL 134 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--CSCEEEEEEESC
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--CCCceEEEECCc
Confidence 357889999999999999999998778999999999 9999999999999865 999999997753 489999998754
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
. ..+..++..+.++|+|||.++.
T Consensus 135 ~------~~~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 135 A------EILLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp H------HHHHHHGGGSGGGEEEEEEEEE
T ss_pred H------HHHHHHHHHHHHhcCCCCEEEE
Confidence 2 3457889999999999999984
No 103
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.53 E-value=4.8e-14 Score=121.62 Aligned_cols=106 Identities=24% Similarity=0.273 Sum_probs=88.6
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-Ccee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D 191 (379)
+.......++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.|++++..+++..++.++++|+.+. ++. ++||
T Consensus 25 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~D 102 (192)
T 1l3i_A 25 IMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA-LCKIPDID 102 (192)
T ss_dssp HHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-HTTSCCEE
T ss_pred HHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-cccCCCCC
Confidence 3333456788999999999999999999977 7999999999 9999999999998866799999998872 232 5899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|++..+ + ..+..++..+.++|+|||.++.
T Consensus 103 ~v~~~~~---~---~~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 103 IAVVGGS---G---GELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp EEEESCC---T---TCHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEECCc---h---HHHHHHHHHHHHhcCCCcEEEE
Confidence 9998643 2 3457899999999999999984
No 104
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.53 E-value=6.1e-14 Score=123.42 Aligned_cols=104 Identities=19% Similarity=0.123 Sum_probs=85.5
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||+|||+|.++..+++.+ .+|+++|+++ +++.|++++..+++. +++++++|+.+...+.++||+
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~ 146 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTAILAHLV-QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDA 146 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccE
Confidence 3344556789999999999999999999984 5999999999 999999999999885 699999999886655578999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|++......+. ..+.++|||||+++..
T Consensus 147 i~~~~~~~~~~---------~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 147 IIVTAAPPEIP---------TALMTQLDEGGILVLP 173 (210)
T ss_dssp EEESSBCSSCC---------THHHHTEEEEEEEEEE
T ss_pred EEEccchhhhh---------HHHHHhcccCcEEEEE
Confidence 99865433322 2467899999998854
No 105
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=3.4e-14 Score=137.06 Aligned_cols=106 Identities=27% Similarity=0.363 Sum_probs=89.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHc-----C-CC-CcEEEEEcceeec------
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEAN-----G-FS-NVITVLKGKIEEI------ 183 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~-----~-~~-~~i~~~~~d~~~~------ 183 (379)
..++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|++++..+ | +. .+++++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 457889999999999999999984 346999999999 999999998765 3 22 4799999999987
Q ss_pred cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 184 ~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++++++||+|++..+.+. ..++..++.++.++|||||+++..
T Consensus 161 ~~~~~~fD~V~~~~~l~~---~~d~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNL---STNKLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp CCCTTCEEEEEEESCGGG---CSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhc---CCCHHHHHHHHHHHcCCCCEEEEE
Confidence 777789999999865443 367889999999999999999853
No 106
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.53 E-value=5.6e-14 Score=124.12 Aligned_cols=100 Identities=25% Similarity=0.243 Sum_probs=79.8
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec----cCCCCceeE
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----ELPVTKVDI 192 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~D~ 192 (379)
...+|.+|||+|||+|.++..+++. |..+|+|+|+|+ |++.+.+.++.. .++.++.+|+... ++. ++||+
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~-~~fD~ 129 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIV-EKVDL 129 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTC-CCEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccc-cceeE
Confidence 4568899999999999999999985 446999999999 998777766653 3589999998774 344 78999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+++.. .......++.++.++|||||.++.
T Consensus 130 V~~~~~-----~~~~~~~~l~~~~r~LkpgG~l~i 159 (210)
T 1nt2_A 130 IYQDIA-----QKNQIEILKANAEFFLKEKGEVVI 159 (210)
T ss_dssp EEECCC-----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEecc-----ChhHHHHHHHHHHHHhCCCCEEEE
Confidence 998731 223445668999999999999984
No 107
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.53 E-value=1.6e-14 Score=123.45 Aligned_cols=112 Identities=13% Similarity=0.068 Sum_probs=87.2
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 107 ~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
.+.+...+.... .+..+|||||||+|.+++.++.. +..+|+|+|+|+ |++.+++++..+|...++++ .|.....
T Consensus 36 ld~fY~~~~~~l--~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~ 111 (200)
T 3fzg_A 36 LNDFYTYVFGNI--KHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDV 111 (200)
T ss_dssp HHHHHHHHHHHS--CCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHH
T ss_pred HHHHHHHHHhhc--CCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccC
Confidence 444555555433 55779999999999999999884 445999999999 99999999999999767777 5555444
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
. .++||+|++.-+.+.+ .+.+..+..+.+.|+|||++|
T Consensus 112 ~-~~~~DvVLa~k~LHlL---~~~~~al~~v~~~L~pggvfI 149 (200)
T 3fzg_A 112 Y-KGTYDVVFLLKMLPVL---KQQDVNILDFLQLFHTQNFVI 149 (200)
T ss_dssp T-TSEEEEEEEETCHHHH---HHTTCCHHHHHHTCEEEEEEE
T ss_pred C-CCCcChhhHhhHHHhh---hhhHHHHHHHHHHhCCCCEEE
Confidence 3 4889999987654444 455556668899999999998
No 108
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=4.6e-14 Score=126.42 Aligned_cols=103 Identities=22% Similarity=0.263 Sum_probs=87.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..+|.+|||||||+|.+++.+++.+ ..+|+|+|+++ +++.|+++++.+|+.++|+++++|..+...+..+||+|+...
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 4578899999999999999999975 56899999999 999999999999998889999999988765434699988644
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++- ..+..++......|+++|+||.
T Consensus 99 mGg-----~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 99 MGG-----TLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp ECH-----HHHHHHHHHTGGGGTTCCEEEE
T ss_pred Cch-----HHHHHHHHHHHHHhCCCCEEEE
Confidence 321 4577889999999999999983
No 109
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.53 E-value=6.2e-14 Score=123.70 Aligned_cols=101 Identities=15% Similarity=0.124 Sum_probs=84.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++.+|||||||+|.++..+++.+. +|+|+|+++ +++.|++ .+. .+++++++|+.++ ++.++||+|++..+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~~~~~~D~v~~~~~ 116 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-TPDRQWDAVFFAHW 116 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-CCSSCEEEEEEESC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-CCCCceeEEEEech
Confidence 56778999999999999999999865 999999999 9999987 454 4699999999988 56689999999765
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.+++. ......+++++.++|||||.++..
T Consensus 117 l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~ 145 (218)
T 3ou2_A 117 LAHVP-DDRFEAFWESVRSAVAPGGVVEFV 145 (218)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 44432 233589999999999999999854
No 110
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.53 E-value=5.2e-14 Score=124.81 Aligned_cols=103 Identities=20% Similarity=0.182 Sum_probs=86.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..+|.+|||||||+|.+++.+++.+ ..+|+|+|+++ +++.|+++++.+|+.++|+++++|..+.-.+..+||+|+...
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG 92 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAG 92 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcC
Confidence 4578899999999999999999975 56899999999 999999999999998889999999865322213699888644
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++ -..+..++......|+++|++|.
T Consensus 93 ~G-----g~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 93 MG-----GRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp EC-----HHHHHHHHHHTGGGCTTCCEEEE
T ss_pred CC-----hHHHHHHHHHHHHHhCCCCEEEE
Confidence 32 13468899999999999999983
No 111
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.52 E-value=5.3e-14 Score=124.54 Aligned_cols=106 Identities=14% Similarity=0.130 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEEEEe
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISE 196 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~Iv~~ 196 (379)
.++.+|||||||+|.++..+|+. +..+|+|||+|+ +++.|++++..++++ +++++++|+.+++ +++++||.|++.
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 35779999999999999999985 456999999999 999999999999884 5999999999875 556789999875
Q ss_pred cCccccC--Ch---hhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLL--FE---NMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~--~~---~~~~~~l~~~~~~LkpgG~lip 227 (379)
....... +. -....++..+.++|||||.++.
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEE
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEE
Confidence 4221110 00 0136789999999999999984
No 112
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.52 E-value=3.2e-14 Score=124.83 Aligned_cols=98 Identities=18% Similarity=0.238 Sum_probs=84.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.|++++..+++.+ ++++++|+.++. +.++||+|++..+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~-~~~~~D~i~~~~~- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFP-SEPPFDGVISRAF- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSC-CCSCEEEEECSCS-
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCC-ccCCcCEEEEecc-
Confidence 5789999999999999999984 557999999999 9999999999999865 999999998876 3478999997532
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..+..++..+.++|+|||.++..
T Consensus 142 ------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 142 ------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 34678999999999999999853
No 113
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.52 E-value=5e-14 Score=128.13 Aligned_cols=107 Identities=22% Similarity=0.361 Sum_probs=89.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
.+.+.+... ..++.+|||+|||+|.+++.+++.|+ +|+|+|+++ +++.|++++..+++. ++++++|+.+. ++.
T Consensus 109 ~~~~~l~~~--~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~-~~~ 182 (254)
T 2nxc_A 109 LALKALARH--LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAA-LPF 182 (254)
T ss_dssp HHHHHHHHH--CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHH-GGG
T ss_pred HHHHHHHHh--cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhc-CcC
Confidence 444555543 46788999999999999999999887 999999999 999999999999885 89999998774 334
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++||+|+++.+. ..+..++..+.++|+|||+++.
T Consensus 183 ~~fD~Vv~n~~~------~~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 183 GPFDLLVANLYA------ELHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp CCEEEEEEECCH------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECCcH------HHHHHHHHHHHHHcCCCCEEEE
Confidence 789999987532 3467889999999999999984
No 114
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.52 E-value=4.9e-14 Score=127.91 Aligned_cols=106 Identities=24% Similarity=0.324 Sum_probs=90.4
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
.+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|+++++.++++++++++++|+.+. ++.++
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~ 162 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEEN 162 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCS
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCC
Confidence 3444566788999999999999999999996 4 57999999999 9999999999999987799999999876 55578
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
||+|++++. ....++.++.++|+|||.++.
T Consensus 163 ~D~v~~~~~--------~~~~~l~~~~~~L~~gG~l~~ 192 (255)
T 3mb5_A 163 VDHVILDLP--------QPERVVEHAAKALKPGGFFVA 192 (255)
T ss_dssp EEEEEECSS--------CGGGGHHHHHHHEEEEEEEEE
T ss_pred cCEEEECCC--------CHHHHHHHHHHHcCCCCEEEE
Confidence 999998642 335678889999999999984
No 115
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.52 E-value=9e-14 Score=133.57 Aligned_cols=118 Identities=21% Similarity=0.222 Sum_probs=95.3
Q ss_pred HHHHHHHHHhcc--CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec
Q 016992 107 TKSYQNVIYQNK--FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (379)
Q Consensus 107 ~~~~~~~i~~~~--~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (379)
...+.+.+.... ...++.+|||+|||+|.++..+++.+. +|+++|+++ +++.|++++..+++. ++++++|+.+.
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~ 292 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEA 292 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTT
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhc
Confidence 334444454332 235788999999999999999999865 999999999 999999999999874 89999999988
Q ss_pred cCCCCceeEEEEecCcccc--CChhhHHHHHHHHHhcccCCEEEEe
Q 016992 184 ELPVTKVDIIISEWMGYFL--LFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 184 ~~~~~~~D~Iv~~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+.++||+|+++++.+.. ........++..+.++|||||.++.
T Consensus 293 ~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 293 LTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp SCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 7656899999998753321 1135678999999999999999984
No 116
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.52 E-value=1.1e-13 Score=127.48 Aligned_cols=122 Identities=19% Similarity=0.175 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccee
Q 016992 104 VVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIE 181 (379)
Q Consensus 104 ~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~ 181 (379)
...++.+.+.+..... .++.+|||+|||+|.++..+++ .+..+|+|+|+|+ +++.|++++..++++ +++++++|+.
T Consensus 92 r~~te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~ 169 (276)
T 2b3t_A 92 RPDTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWF 169 (276)
T ss_dssp CTTHHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTT
T ss_pred CchHHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchh
Confidence 3345556666655443 5678999999999999999997 4567999999999 999999999999885 6999999998
Q ss_pred eccCCCCceeEEEEecCcccc----------CCh------------hhHHHHHHHHHhcccCCEEEEec
Q 016992 182 EIELPVTKVDIIISEWMGYFL----------LFE------------NMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 182 ~~~~~~~~~D~Iv~~~~~~~l----------~~~------------~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+. ++.++||+|+++++.... .++ ..+..++..+.++|+|||+++..
T Consensus 170 ~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 170 SA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp GG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 75 334789999998642111 011 34578899999999999999854
No 117
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.52 E-value=7.5e-14 Score=130.78 Aligned_cols=108 Identities=15% Similarity=0.116 Sum_probs=87.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC------CCCcEEEEEcceeecc----CC--C
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG------FSNVITVLKGKIEEIE----LP--V 187 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~------~~~~i~~~~~d~~~~~----~~--~ 187 (379)
.++.+|||+|||+|.++..+++.+..+|+|+|+|+ |++.|+++....+ ...+++++++|+.+++ ++ .
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46789999999999999999987667999999999 9999999887642 2246999999999875 43 3
Q ss_pred CceeEEEEecCcccc-CChhhHHHHHHHHHhcccCCEEEEec
Q 016992 188 TKVDIIISEWMGYFL-LFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l-~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++||+|++..+.+++ .+...+..++.++.++|||||.++..
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGT 154 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 589999997654444 45567789999999999999999843
No 118
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.52 E-value=5.9e-14 Score=123.59 Aligned_cols=99 Identities=19% Similarity=0.171 Sum_probs=83.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.|++++ ++.++++|+.+++ ++++||+|++..+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~-~~~~fD~v~~~~~ 111 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD-AIDAYDAVWAHAC 111 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC-CCSCEEEEEECSC
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC-CCCcEEEEEecCc
Confidence 45788999999999999999999865 999999999 999999876 2678889999888 5589999998754
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.+++. ...+..+++++.++|||||+++..
T Consensus 112 l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 140 (211)
T 3e23_A 112 LLHVP-RDELADVLKLIWRALKPGGLFYAS 140 (211)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 33332 237789999999999999999853
No 119
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=3.5e-14 Score=124.25 Aligned_cols=98 Identities=23% Similarity=0.271 Sum_probs=83.9
Q ss_pred CCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccc
Q 016992 123 DKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYF 201 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~ 201 (379)
+.+|||+|||+|.++..+++.|. +|+|+|+++ |++.|+++. .+++++++|+.++++++++||+|++..+.++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 114 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIH 114 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGGGSCCCEEEEEEESSSTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccccCCCCeEEEEehhhHhc
Confidence 78999999999999999999866 999999999 999998862 3589999999999887789999999755333
Q ss_pred cCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 202 LLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 202 l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+. ..++..++.++.++|||||.++..
T Consensus 115 ~~-~~~~~~~l~~~~~~L~pgG~l~i~ 140 (203)
T 3h2b_A 115 MG-PGELPDALVALRMAVEDGGGLLMS 140 (203)
T ss_dssp CC-TTTHHHHHHHHHHTEEEEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHcCCCcEEEEE
Confidence 32 247889999999999999999843
No 120
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=6.4e-14 Score=127.16 Aligned_cols=105 Identities=15% Similarity=0.149 Sum_probs=87.1
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
+.......++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.++++ . .+++++++|+.+++ ++++||
T Consensus 25 l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~-~~~~fD 97 (259)
T 2p35_A 25 LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----L-PNTNFGKADLATWK-PAQKAD 97 (259)
T ss_dssp HHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----S-TTSEEEECCTTTCC-CSSCEE
T ss_pred HHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----C-CCcEEEECChhhcC-ccCCcC
Confidence 444455667889999999999999999985 445999999999 99999887 1 45899999999887 568999
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+|++..+.++ ..++..++.++.++|||||.++..
T Consensus 98 ~v~~~~~l~~---~~~~~~~l~~~~~~L~pgG~l~~~ 131 (259)
T 2p35_A 98 LLYANAVFQW---VPDHLAVLSQLMDQLESGGVLAVQ 131 (259)
T ss_dssp EEEEESCGGG---STTHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEeCchhh---CCCHHHHHHHHHHhcCCCeEEEEE
Confidence 9998765333 367889999999999999999853
No 121
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=9.2e-14 Score=118.96 Aligned_cols=103 Identities=22% Similarity=0.282 Sum_probs=86.2
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||+|||+|.++..+++ +..+|+|+|+++ +++.|++++..+++ .+++++++|+.+ +++.++||+
T Consensus 27 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~~d~~~-~~~~~~~D~ 103 (183)
T 2yxd_A 27 SIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNI-KNCQIIKGRAED-VLDKLEFNK 103 (183)
T ss_dssp HHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTC-CSEEEEESCHHH-HGGGCCCSE
T ss_pred HHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCC-CcEEEEECCccc-cccCCCCcE
Confidence 33334556888999999999999999998 567999999999 99999999999988 469999999988 555578999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|++..+ ..+..++..+.++ |||.++..
T Consensus 104 i~~~~~-------~~~~~~l~~~~~~--~gG~l~~~ 130 (183)
T 2yxd_A 104 AFIGGT-------KNIEKIIEILDKK--KINHIVAN 130 (183)
T ss_dssp EEECSC-------SCHHHHHHHHHHT--TCCEEEEE
T ss_pred EEECCc-------ccHHHHHHHHhhC--CCCEEEEE
Confidence 998754 4567888888887 99998843
No 122
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=5.8e-14 Score=135.36 Aligned_cols=109 Identities=17% Similarity=0.139 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcceeeccC----CCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIEL----PVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~~D~Iv 194 (379)
.++.+|||+|||+|.+++.+|+.|+++|+|+|+|+ +++.|+++++.+++.+ +++++++|+.+... ...+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 57889999999999999999998888999999999 9999999999999965 79999999977421 135899999
Q ss_pred EecCccc----c--CChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 195 SEWMGYF----L--LFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 195 ~~~~~~~----l--~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
++++.+. . .....+..++..+.++|+|||.++.+.
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9876432 1 112345567888899999999998553
No 123
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=1.9e-14 Score=131.33 Aligned_cols=105 Identities=31% Similarity=0.310 Sum_probs=87.0
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 111 ~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
.+.+.......++.+|||||||+|.++..+++.+ .+|+|+|+|+ |++.|+++. +++++++|++++++++++
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~~ 94 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPDKS 94 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCTTC
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCCCC
Confidence 3445544556788999999999999999999865 5999999999 999886543 599999999999887789
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
||+|++..+.+ +..++..+++++.++|| ||.++.
T Consensus 95 fD~v~~~~~l~---~~~~~~~~l~~~~~~Lk-gG~~~~ 128 (261)
T 3ege_A 95 VDGVISILAIH---HFSHLEKSFQEMQRIIR-DGTIVL 128 (261)
T ss_dssp BSEEEEESCGG---GCSSHHHHHHHHHHHBC-SSCEEE
T ss_pred EeEEEEcchHh---hccCHHHHHHHHHHHhC-CcEEEE
Confidence 99999976533 33778899999999999 997663
No 124
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.51 E-value=3.1e-15 Score=134.71 Aligned_cols=103 Identities=19% Similarity=0.202 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.|++++..+++.++++++++|+.+++. .++||+|+++++.
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS-FLKADVVFLSPPW 154 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG-GCCCSEEEECCCC
T ss_pred cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc-cCCCCEEEECCCc
Confidence 478899999999999999999987 6999999999 999999999999986689999999998874 4799999998764
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.. ......+.++.++|+|||.++..
T Consensus 155 ~~~---~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGP---DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSG---GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCc---chhhhHHHHHHhhcCCcceeHHH
Confidence 433 33344566788999999997744
No 125
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.50 E-value=1.1e-13 Score=132.84 Aligned_cols=113 Identities=15% Similarity=0.085 Sum_probs=89.8
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCC--cEEEEEcceeeccCCCCc
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSN--VITVLKGKIEEIELPVTK 189 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~--~i~~~~~d~~~~~~~~~~ 189 (379)
+.......++.+|||+|||+|.+++.+++.+ ..+|+|+|+|+ +++.|++++..+++.+ +++++.+|+.+. ++.++
T Consensus 214 ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~-~~~~~ 292 (375)
T 4dcm_A 214 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSG-VEPFR 292 (375)
T ss_dssp HHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTT-CCTTC
T ss_pred HHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhcc-CCCCC
Confidence 4444555667899999999999999999964 57999999999 9999999999998753 588999999874 45579
Q ss_pred eeEEEEecCcccc--CChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFL--LFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
||+|+++++.+.. ........++..+.++|||||.++.
T Consensus 293 fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 293 FNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp EEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 9999998753321 1123345789999999999999984
No 126
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.50 E-value=4.7e-14 Score=128.26 Aligned_cols=107 Identities=14% Similarity=0.098 Sum_probs=81.7
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----- 185 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----- 185 (379)
+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+ |++.|++++..+ +++.++.++..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~-------~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR-------CVTIDLLDITAEIPKE 106 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS-------CCEEEECCTTSCCCGG
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc-------cceeeeeecccccccc
Confidence 3345556678899999999999999999999875 999999999 999999987643 23344444333
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..++||+|++..+.+.+ .......++..+.++| |||+++.+
T Consensus 107 ~~~~fD~Vv~~~~l~~~-~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 107 LAGHFDFVLNDRLINRF-TTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp GTTCCSEEEEESCGGGS-CHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred cCCCccEEEEhhhhHhC-CHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 13789999997653333 2356778999999999 99999843
No 127
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=5.1e-14 Score=129.63 Aligned_cols=99 Identities=19% Similarity=0.210 Sum_probs=83.9
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
....++.+|||||||+|.++..+++.+ .+|+|+|+|+ |++.|+++. .++.++++|+.+++++ ++||+|++.
T Consensus 53 l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~~ 124 (279)
T 3ccf_A 53 LNPQPGEFILDLGCGTGQLTEKIAQSG-AEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVD-KPLDAVFSN 124 (279)
T ss_dssp HCCCTTCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCS-SCEEEEEEE
T ss_pred hCCCCCCEEEEecCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcC-CCcCEEEEc
Confidence 345678899999999999999999954 5999999999 999998764 3588999999998875 899999987
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+.++ ..++..++.++.++|||||.++.
T Consensus 125 ~~l~~---~~d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 125 AMLHW---VKEPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp SCGGG---CSCHHHHHHHHHHHEEEEEEEEE
T ss_pred chhhh---CcCHHHHHHHHHHhcCCCcEEEE
Confidence 55333 36778999999999999999884
No 128
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.50 E-value=7e-14 Score=124.29 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CC---CCceeE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP---VTKVDI 192 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~---~~~~D~ 192 (379)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++++|+.+.. ++ .++||+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 46789999999999999999995 3 46999999999 99999999999999888999999997642 11 157999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
|+++.. ......++..+.++|+|||+++...
T Consensus 137 v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 137 IFIDAD------KQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEECSC------GGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEcCC------cHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 998653 2456788999999999999988543
No 129
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.50 E-value=1.5e-13 Score=123.02 Aligned_cols=111 Identities=19% Similarity=0.239 Sum_probs=87.8
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
.+.+.+.... .++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++. .+++++++|+.++++ .
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-G 98 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-S
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-C
Confidence 3344444332 5778999999999999999999765 999999999 999998864 348999999998877 4
Q ss_pred CceeEEEEec-CccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 188 TKVDIIISEW-MGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 188 ~~~D~Iv~~~-~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
++||+|+|.. +.+++.....+..++.++.++|+|||.++...
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 8999999632 32334444677899999999999999998653
No 130
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.50 E-value=1.8e-14 Score=130.07 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=87.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC------CCcee
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP------VTKVD 191 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~~D 191 (379)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|+++++.+++.++|+++++|+.+.... .++||
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD 138 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFD 138 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEE
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEe
Confidence 46679999999999999999994 3 56999999999 9999999999999988899999999775321 37899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
+|+++.. ......++..+.++|+|||+++....
T Consensus 139 ~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 139 FIFIDAD------KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEEESC------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 9998753 24567789999999999999996543
No 131
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.49 E-value=1.1e-13 Score=127.83 Aligned_cols=122 Identities=25% Similarity=0.268 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccee
Q 016992 103 DVVRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIE 181 (379)
Q Consensus 103 d~~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~ 181 (379)
....++.+.+.+.......++.+|||+|||+|.+++.+++.+..+|+|+|+|+ +++.|++++..+++.++++++++|+.
T Consensus 104 pr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~ 183 (284)
T 1nv8_A 104 PRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFL 183 (284)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTT
T ss_pred cChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcch
Confidence 44445555555554433346679999999999999999987456999999999 99999999999999778999999998
Q ss_pred eccCCCCce---eEEEEecCccccC---------ChhhH--------HHHHHHHH-hcccCCEEEEe
Q 016992 182 EIELPVTKV---DIIISEWMGYFLL---------FENML--------NTVLYARD-KWLVDDGIVLP 227 (379)
Q Consensus 182 ~~~~~~~~~---D~Iv~~~~~~~l~---------~~~~~--------~~~l~~~~-~~LkpgG~lip 227 (379)
+. ++ ++| |+|+++++ |... +++.. ..+++.+. +.|+|||.++.
T Consensus 184 ~~-~~-~~f~~~D~IvsnPP-yi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 184 EP-FK-EKFASIEMILSNPP-YVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp GG-GG-GGTTTCCEEEECCC-CBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred hh-cc-cccCCCCEEEEcCC-CCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 74 33 578 99999864 3211 22211 26788899 99999999984
No 132
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.49 E-value=1.2e-13 Score=123.57 Aligned_cols=102 Identities=19% Similarity=0.227 Sum_probs=84.4
Q ss_pred ccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee----ccCCCCce
Q 016992 117 NKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE----IELPVTKV 190 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~ 190 (379)
.....++.+|||+|||+|.++..+++. |..+|+|+|+++ +++.|++++..+ .++.++.+|+.+ +++. ++|
T Consensus 69 ~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~-~~~ 144 (230)
T 1fbn_A 69 VMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIV-EKV 144 (230)
T ss_dssp CCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTS-CCE
T ss_pred ccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccC-ccE
Confidence 344568899999999999999999985 667999999999 999999887654 569999999988 6665 789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|+++. ........++.++.++|||||.++.
T Consensus 145 D~v~~~~-----~~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 145 DVIYEDV-----AQPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp EEEEECC-----CSTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEec-----CChhHHHHHHHHHHHhCCCCcEEEE
Confidence 9999543 2223457789999999999999984
No 133
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.49 E-value=7e-14 Score=129.71 Aligned_cols=103 Identities=19% Similarity=0.172 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCCchHHHHHH----H-cCCCEE--EEEecHH-HHHHHHHHHHHc-CCCCcE--EEEEcceeecc-----
Q 016992 121 FKDKVVLDVGAGTGILSLFCA----K-AGAAHV--YAVECSQ-MANMAKQIVEAN-GFSNVI--TVLKGKIEEIE----- 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la----~-~g~~~v--~~vD~s~-~~~~a~~~~~~~-~~~~~i--~~~~~d~~~~~----- 184 (379)
.++.+|||||||+|.++..++ . .+...| +|+|+|+ |++.|++++... ++ .++ .+..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNL-ENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSC-TTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCC-CcceEEEEecchhhhhhhhcc
Confidence 467799999999997665332 2 233444 9999999 999999988754 44 334 44566666554
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+++++||+|++..+ +.+..++..+++++.++|||||+++.
T Consensus 130 ~~~~~~fD~V~~~~~---l~~~~d~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 130 KKELQKWDFIHMIQM---LYYVKDIPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp TTCCCCEEEEEEESC---GGGCSCHHHHHHHHHHTEEEEEEEEE
T ss_pred ccCCCceeEEEEeee---eeecCCHHHHHHHHHHHcCCCcEEEE
Confidence 34689999998755 44447889999999999999999884
No 134
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=5.7e-14 Score=125.00 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=86.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCC----Ccee
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPV----TKVD 191 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~----~~~D 191 (379)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++++|+.+.. +.. ++||
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 46789999999999999999984 3 57999999999 99999999999999888999999996642 111 6899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+|+++.. ......++..+.++|||||+++...
T Consensus 143 ~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 143 LIYIDAD------KANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9997642 2456788999999999999998543
No 135
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.49 E-value=1.4e-13 Score=131.31 Aligned_cols=117 Identities=21% Similarity=0.159 Sum_probs=95.5
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (379)
+...+.......++.+|||+|||+|.+++.++.. +..+|+|+|+++ +++.|++++..+|+. +++++++|+.+++.+
T Consensus 191 la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~ 269 (354)
T 3tma_A 191 LAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRF 269 (354)
T ss_dssp HHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGT
T ss_pred HHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccc
Confidence 4444555566678899999999999999999995 346999999999 999999999999997 799999999998876
Q ss_pred CCceeEEEEecCccccCCh------hhHHHHHHHHHhcccCCEEEEec
Q 016992 187 VTKVDIIISEWMGYFLLFE------NMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~------~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
...||+|+++++ |+.... .....++..+.++|+|||.++..
T Consensus 270 ~~~~D~Ii~npP-yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 270 FPEVDRILANPP-HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp CCCCSEEEECCC-SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred cCCCCEEEECCC-CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 677999999975 433221 22367889999999999998843
No 136
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=9.6e-14 Score=124.36 Aligned_cols=104 Identities=18% Similarity=0.252 Sum_probs=87.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCC--CCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELP--VTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~--~~~~D~Iv~ 195 (379)
.++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++...++.++++++++|+.+. +.. .++||+|++
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 47789999999999999999995 456999999999 9999999999999877899999999874 221 378999998
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
+... .....++..+.++|+|||.++....
T Consensus 133 ~~~~------~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 133 DAAK------GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EGGG------SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CCCH------HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 7531 3567899999999999999986543
No 137
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.49 E-value=3e-14 Score=120.81 Aligned_cols=98 Identities=18% Similarity=0.133 Sum_probs=79.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CC--CCceeEEEEe
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP--VTKVDIIISE 196 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~--~~~~D~Iv~~ 196 (379)
++.+|||+|||+|.++..+++.+. .|+|+|+++ +++.|++++..+++ +++++++|+.+.. .+ .++||+|+++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 778999999999999999999876 599999999 99999999999887 6999999998742 11 2479999998
Q ss_pred cCccccCChhhHHHHHHHHH--hcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARD--KWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~--~~LkpgG~lip 227 (379)
++ +. .....++..+. ++|+|||.++.
T Consensus 118 ~~-~~----~~~~~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 118 PP-YA----MDLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp CC-TT----SCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred CC-Cc----hhHHHHHHHHHhhcccCCCcEEEE
Confidence 64 22 22334455555 99999999984
No 138
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.49 E-value=1.4e-13 Score=126.28 Aligned_cols=112 Identities=16% Similarity=0.132 Sum_probs=89.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CC-CEEEEEecHH-------HHHHHHHHHHHcCCCCcEEEEEcc---e
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-------MANMAKQIVEANGFSNVITVLKGK---I 180 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~-~~v~~vD~s~-------~~~~a~~~~~~~~~~~~i~~~~~d---~ 180 (379)
.+.......++.+|||||||+|.++..+++. |. .+|+|+|+|+ +++.|++++...++.++++++++| .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 113 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD 113 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTT
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhh
Confidence 3444455678999999999999999999986 43 6999999986 799999999988887789999998 4
Q ss_pred eeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 181 EEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 181 ~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+++++++||+|++..+.+++ .+...++..+.++++|||.++.
T Consensus 114 ~~~~~~~~~fD~v~~~~~l~~~---~~~~~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 114 DLGPIADQHFDRVVLAHSLWYF---ASANALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp CCGGGTTCCCSEEEEESCGGGS---SCHHHHHHHHHHHTTTCSEEEE
T ss_pred ccCCCCCCCEEEEEEccchhhC---CCHHHHHHHHHHHhCCCCEEEE
Confidence 5555566899999987654444 4455677778888888999884
No 139
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.49 E-value=8.7e-15 Score=128.74 Aligned_cols=118 Identities=21% Similarity=0.102 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHhccCC-CCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccee
Q 016992 105 VRTKSYQNVIYQNKFL-FKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIE 181 (379)
Q Consensus 105 ~r~~~~~~~i~~~~~~-~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~ 181 (379)
...+.+.+.+...... .++.+|||+|||+|.++..+++.+ ..+|+|+|+++ +++.|++++..+++ +++++++|+.
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~ 89 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGI 89 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchH
Confidence 3444555555544433 678899999999999999999964 35999999999 99999999998876 6899999998
Q ss_pred eccCCC-----CceeEEEEecCccccCCh------------------------hhHHHHHHHHHhcccCCEE-EE
Q 016992 182 EIELPV-----TKVDIIISEWMGYFLLFE------------------------NMLNTVLYARDKWLVDDGI-VL 226 (379)
Q Consensus 182 ~~~~~~-----~~~D~Iv~~~~~~~l~~~------------------------~~~~~~l~~~~~~LkpgG~-li 226 (379)
+ .++. ++||+|+++++ ++.... ..+..++..+.++|||||+ ++
T Consensus 90 ~-~~~~~~~~~~~fD~i~~npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 90 E-WLIERAERGRPWHAIVSNPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp H-HHHHHHHTTCCBSEEEECCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred h-hhhhhhhccCcccEEEECCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 7 3433 78999999864 221110 1126788888999999999 55
No 140
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.49 E-value=4.3e-14 Score=120.04 Aligned_cols=95 Identities=22% Similarity=0.290 Sum_probs=81.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++.+|||+|||+|.++..+++.+. +|+|+|+++ +++.++++ . .+++++.+| +++++++||+|++..+
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~-~~v~~~~~d---~~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----F-DSVITLSDP---KEIPDNSVDFILFANS 84 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----C-TTSEEESSG---GGSCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----C-CCcEEEeCC---CCCCCCceEEEEEccc
Confidence 46788999999999999999999765 999999999 99999887 2 468999999 5566689999998765
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+ +..+...+++++.++|||||.++.
T Consensus 85 l~---~~~~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 85 FH---DMDDKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp ST---TCSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hh---cccCHHHHHHHHHHhcCCCCEEEE
Confidence 33 336778999999999999999984
No 141
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.48 E-value=6.3e-14 Score=126.10 Aligned_cols=97 Identities=20% Similarity=0.237 Sum_probs=81.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec--cCCCCceeEEEEe
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISE 196 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~Iv~~ 196 (379)
..++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++ ++++++|+.++ ++++++||+|++.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 45778999999999999999999866 899999999 99998864 68899999886 6667899999997
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+.+++. ...+..++.++.++|||||.++.
T Consensus 109 ~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 109 HFVEHLD-PERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp SCGGGSC-GGGHHHHHHHHHHHBCTTCCEEE
T ss_pred CchhhCC-cHHHHHHHHHHHHHcCCCcEEEE
Confidence 6544442 23678999999999999999985
No 142
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.48 E-value=1.9e-13 Score=123.99 Aligned_cols=105 Identities=27% Similarity=0.227 Sum_probs=89.0
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHc-CCCCcEEEEEcceeeccCCCCc
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEAN-GFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+ |. .+++++++|+.+.++++++
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~~ 166 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-ENVRFHLGKLEEAELEEAA 166 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-CCEEEEESCGGGCCCCTTC
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCEEEEECchhhcCCCCCC
Confidence 444456678999999999999999999996 5 46999999999 999999999887 74 6799999999988666678
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
||+|++++ +....++.++.++|+|||.++.
T Consensus 167 ~D~v~~~~--------~~~~~~l~~~~~~L~~gG~l~~ 196 (258)
T 2pwy_A 167 YDGVALDL--------MEPWKVLEKAALALKPDRFLVA 196 (258)
T ss_dssp EEEEEEES--------SCGGGGHHHHHHHEEEEEEEEE
T ss_pred cCEEEECC--------cCHHHHHHHHHHhCCCCCEEEE
Confidence 99999864 2334778889999999999884
No 143
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.48 E-value=9.5e-14 Score=143.33 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=92.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcceeec-cCCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEI-ELPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~-~~~~~~~D~Iv~~~ 197 (379)
.+|++|||+|||+|.+++.+++.|+.+|++||+|+ +++.|+++++.+++. ++++++++|+.++ +...++||+|++++
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 47889999999999999999998888999999999 999999999999997 5899999999874 33347899999997
Q ss_pred Cccc--------cCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 198 MGYF--------LLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 198 ~~~~--------l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
+.+. .........++..+.++|+|||.++.+.+
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 6432 12234567889999999999999995443
No 144
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.48 E-value=2.2e-13 Score=127.91 Aligned_cols=106 Identities=23% Similarity=0.153 Sum_probs=86.1
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~--~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
+.......++.+|||||||+|.++..+++.+. .+|+|+|+++ +++.|++++..+++.+ ++++++|+.+...+.++|
T Consensus 67 l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~~~~~~~f 145 (317)
T 1dl5_A 67 FMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYGVPEFSPY 145 (317)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGCCGGGCCE
T ss_pred HHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhccccCCCe
Confidence 44445667899999999999999999998532 5799999999 9999999999999865 999999998854444789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
|+|++..+...+ . ..+.++|||||+++...
T Consensus 146 D~Iv~~~~~~~~---~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 146 DVIFVTVGVDEV---P------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp EEEEECSBBSCC---C------HHHHHHEEEEEEEEEEB
T ss_pred EEEEEcCCHHHH---H------HHHHHhcCCCcEEEEEE
Confidence 999997654333 2 45678999999998653
No 145
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.47 E-value=1.8e-13 Score=122.01 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=84.4
Q ss_pred ccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---cCCCCce
Q 016992 117 NKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELPVTKV 190 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~~ 190 (379)
.+.+.||.+|||+|||+|.++..+|+. | .++|+|+|+++ |++.+++++... .++..+.+|+... +...+.+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~v 148 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGV 148 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCE
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceE
Confidence 356789999999999999999999994 4 47999999999 999998887654 3588898888654 3345789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|+++.. +..+...++.++.+.|||||.++.
T Consensus 149 DvVf~d~~-----~~~~~~~~l~~~~r~LKpGG~lvI 180 (233)
T 4df3_A 149 DGLYADVA-----QPEQAAIVVRNARFFLRDGGYMLM 180 (233)
T ss_dssp EEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEEecc-----CChhHHHHHHHHHHhccCCCEEEE
Confidence 99997642 225667899999999999999874
No 146
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.47 E-value=1.4e-13 Score=121.34 Aligned_cols=103 Identities=18% Similarity=0.261 Sum_probs=86.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeEEEEe
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISE 196 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Iv~~ 196 (379)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++++|+.+. +...+ ||+|+++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 35679999999999999999985 3 46999999999 9999999999998877899999999775 33336 9999987
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
.. ......++..+.++|||||+++....
T Consensus 134 ~~------~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 134 CD------VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp TT------TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred CC------hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 42 14567889999999999999986543
No 147
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.47 E-value=9.7e-14 Score=134.43 Aligned_cols=111 Identities=24% Similarity=0.215 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----CCCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~Iv~ 195 (379)
.++.+|||+|||+|.+++.+++.|+++|+|+|+++ +++.|++++..+++.++++++++|+.++.. ..++||+|++
T Consensus 216 ~~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 216 QPGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred hCCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 37889999999999999999998888999999999 999999999999986689999999987632 2468999999
Q ss_pred ecCccccCC------hhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 196 EWMGYFLLF------ENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 196 ~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
+++.+.... ......++..+.++|+|||.++..+++
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 875332211 134567888999999999998865443
No 148
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.47 E-value=3.3e-13 Score=130.95 Aligned_cols=112 Identities=20% Similarity=0.222 Sum_probs=88.2
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHH-------HHHHHHcCCC-CcEEEEEcceee
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMA-------KQIVEANGFS-NVITVLKGKIEE 182 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a-------~~~~~~~~~~-~~i~~~~~d~~~ 182 (379)
.+.......++.+|||||||+|.++..+|+ .|..+|+|||+++ +++.| ++++...|+. .+++++++|...
T Consensus 233 ~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~ 312 (433)
T 1u2z_A 233 DVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 312 (433)
T ss_dssp HHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence 344445667899999999999999999999 4777999999999 99999 8888888853 679999976442
Q ss_pred c--cC--CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 183 I--EL--PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 183 ~--~~--~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
. ++ ..++||+|+++.. + ....+..++.++.+.|||||.++..
T Consensus 313 ~~~~~~~~~~~FDvIvvn~~---l-~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 313 DNNRVAELIPQCDVILVNNF---L-FDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp TCHHHHHHGGGCSEEEECCT---T-CCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred cccccccccCCCCEEEEeCc---c-ccccHHHHHHHHHHhCCCCeEEEEe
Confidence 1 11 1368999997532 2 2257778899999999999999854
No 149
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.47 E-value=2.6e-13 Score=121.57 Aligned_cols=102 Identities=18% Similarity=0.193 Sum_probs=83.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---cCCCCcee
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELPVTKVD 191 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~~D 191 (379)
....++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.+.++++.+ .+++++++|+.+. +...++||
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEE
Confidence 44668899999999999999999985 347999999999 999888888776 4699999999873 33457899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|++++. .......++.++.++|||||.++.
T Consensus 150 ~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 150 VIFADVA-----QPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp EEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEE
Confidence 9998753 223445678889999999999985
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.47 E-value=1.6e-13 Score=126.26 Aligned_cols=106 Identities=20% Similarity=0.190 Sum_probs=89.5
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+++.++++++++|+.+. ++.++|
T Consensus 104 i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~ 182 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDV 182 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSE
T ss_pred HHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCcc
Confidence 444456778999999999999999999986 5 57999999999 9999999999998867899999999887 555789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|+|++++. ....++..+.++|+|||.++..
T Consensus 183 D~V~~~~~--------~~~~~l~~~~~~L~pgG~l~~~ 212 (277)
T 1o54_A 183 DALFLDVP--------DPWNYIDKCWEALKGGGRFATV 212 (277)
T ss_dssp EEEEECCS--------CGGGTHHHHHHHEEEEEEEEEE
T ss_pred CEEEECCc--------CHHHHHHHHHHHcCCCCEEEEE
Confidence 99998642 3347788889999999999843
No 151
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.47 E-value=1.3e-13 Score=133.46 Aligned_cols=110 Identities=20% Similarity=0.189 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC-CCcEEEEEcceeeccC----CCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF-SNVITVLKGKIEEIEL----PVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~-~~~i~~~~~d~~~~~~----~~~~~D~Iv 194 (379)
.++.+|||+|||+|.+++.+++.|+.+|+|+|+++ +++.|++++..+++ .++++++++|+.++.. ...+||+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 47889999999999999999998888999999999 99999999999998 6579999999987632 136899999
Q ss_pred EecCcccc------CChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 195 SEWMGYFL------LFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 195 ~~~~~~~l------~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
++++.+.. ........++..+.++|+|||+++.+.+
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 99753221 1124567888899999999999986543
No 152
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.46 E-value=1.2e-13 Score=127.06 Aligned_cols=106 Identities=15% Similarity=0.106 Sum_probs=85.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHc-CCCCcEEEEEcceeeccCCCC
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEAN-GFSNVITVLKGKIEEIELPVT 188 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~-~~~~~i~~~~~d~~~~~~~~~ 188 (379)
.+.......++.+|||+|||+|.++..+++. +..+|+++|+++ +++.|++++..+ |. ++++++++|+.+ .++++
T Consensus 101 ~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~-~~~~~ 178 (275)
T 1yb2_A 101 YIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIAD-FISDQ 178 (275)
T ss_dssp -----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTT-CCCSC
T ss_pred HHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhc-cCcCC
Confidence 3444556778899999999999999999985 346999999999 999999999888 75 569999999987 45557
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+||+|++++ +....++.++.++|||||+++..
T Consensus 179 ~fD~Vi~~~--------~~~~~~l~~~~~~LkpgG~l~i~ 210 (275)
T 1yb2_A 179 MYDAVIADI--------PDPWNHVQKIASMMKPGSVATFY 210 (275)
T ss_dssp CEEEEEECC--------SCGGGSHHHHHHTEEEEEEEEEE
T ss_pred CccEEEEcC--------cCHHHHHHHHHHHcCCCCEEEEE
Confidence 899999853 23457889999999999999854
No 153
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=2e-13 Score=125.39 Aligned_cols=100 Identities=21% Similarity=0.265 Sum_probs=85.5
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
...++.+|||+|||+|.+++.+++. +..+|+|+|+++ +++.|+++++.+++. ++.++++|+.+++. .++||+|+++
T Consensus 116 ~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~~-~~~~D~Vi~d 193 (272)
T 3a27_A 116 ISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVEL-KDVADRVIMG 193 (272)
T ss_dssp SCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCCC-TTCEEEEEEC
T ss_pred hcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcCc-cCCceEEEEC
Confidence 3568899999999999999999996 467999999999 999999999999995 58899999998833 4789999998
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++. ....++..+.+.|+|||.++.
T Consensus 194 ~p~-------~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 194 YVH-------KTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp CCS-------SGGGGHHHHHHHEEEEEEEEE
T ss_pred Ccc-------cHHHHHHHHHHHcCCCCEEEE
Confidence 652 334577788899999999883
No 154
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.46 E-value=3.4e-13 Score=124.47 Aligned_cols=117 Identities=18% Similarity=0.293 Sum_probs=87.0
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEec-HH-HHHHHHHHH-----HHcCCC----CcEEE
Q 016992 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVEC-SQ-MANMAKQIV-----EANGFS----NVITV 175 (379)
Q Consensus 107 ~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~-s~-~~~~a~~~~-----~~~~~~----~~i~~ 175 (379)
...+.+.+.......++.+|||||||+|.+++.+++.|+.+|+|+|+ ++ +++.|++++ ..+++. +++++
T Consensus 64 ~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 64 ARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 34455556655555688899999999999999999988779999999 89 999999999 555654 36888
Q ss_pred EEcceeecc--C----CCCceeEEEEecCccccCChhhHHHHHHHHHhccc---C--CEEEE
Q 016992 176 LKGKIEEIE--L----PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLV---D--DGIVL 226 (379)
Q Consensus 176 ~~~d~~~~~--~----~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lk---p--gG~li 226 (379)
+..+..+.. + +.++||+|++..+ +.+......++..+.++|+ | ||.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dv---l~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~ 202 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADL---LSFHQAHDALLRSVKMLLALPANDPTAVAL 202 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESC---CSCGGGHHHHHHHHHHHBCCTTTCTTCEEE
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCc---ccChHHHHHHHHHHHHHhcccCCCCCCEEE
Confidence 866644321 1 2478999997433 4445778899999999999 9 99765
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.46 E-value=3e-13 Score=120.76 Aligned_cols=102 Identities=21% Similarity=0.190 Sum_probs=81.8
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.|++++...+ +++++++|+.+.....++||+
T Consensus 62 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~ 137 (231)
T 1vbf_A 62 MLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYDR 137 (231)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCccE
Confidence 4444556788999999999999999999986 6999999999 9999999987765 699999999873323478999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|++..+.+.+ . ..+.++|+|||+++..
T Consensus 138 v~~~~~~~~~---~------~~~~~~L~pgG~l~~~ 164 (231)
T 1vbf_A 138 VVVWATAPTL---L------CKPYEQLKEGGIMILP 164 (231)
T ss_dssp EEESSBBSSC---C------HHHHHTEEEEEEEEEE
T ss_pred EEECCcHHHH---H------HHHHHHcCCCcEEEEE
Confidence 9986543322 1 3577899999998854
No 156
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.46 E-value=8e-14 Score=126.35 Aligned_cols=107 Identities=10% Similarity=0.064 Sum_probs=83.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc---CCCEEEEEecHH-HHHHHHHHHHHc---CCCCc---------------------
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA---GAAHVYAVECSQ-MANMAKQIVEAN---GFSNV--------------------- 172 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~---g~~~v~~vD~s~-~~~~a~~~~~~~---~~~~~--------------------- 172 (379)
.++.+|||+|||+|.+++.+++. +..+|+|+|+|+ +++.|++++..+ ++.++
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 46779999999999999999885 345999999999 999999988766 44322
Q ss_pred ----EE-------------EEEcceeeccC-----CCCceeEEEEecCccccCC------hhhHHHHHHHHHhcccCCEE
Q 016992 173 ----IT-------------VLKGKIEEIEL-----PVTKVDIIISEWMGYFLLF------ENMLNTVLYARDKWLVDDGI 224 (379)
Q Consensus 173 ----i~-------------~~~~d~~~~~~-----~~~~~D~Iv~~~~~~~l~~------~~~~~~~l~~~~~~LkpgG~ 224 (379)
++ ++++|+.+... ...+||+|+++++...... ......++..+.++|+|||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 66 99999887532 3358999999864222221 24567899999999999999
Q ss_pred EEe
Q 016992 225 VLP 227 (379)
Q Consensus 225 lip 227 (379)
++.
T Consensus 210 l~~ 212 (250)
T 1o9g_A 210 IAV 212 (250)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 157
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.46 E-value=3e-13 Score=124.43 Aligned_cols=106 Identities=28% Similarity=0.377 Sum_probs=89.0
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHc-C-CCCcEEEEEcceeeccCCCC
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEAN-G-FSNVITVLKGKIEEIELPVT 188 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~-~-~~~~i~~~~~d~~~~~~~~~ 188 (379)
+.......++.+|||+|||+|.++..+++. + ..+|+++|+++ +++.|++++..+ + +.++++++++|+.+.+++++
T Consensus 91 i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~ 170 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDG 170 (280)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTT
T ss_pred HHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCC
Confidence 444456778999999999999999999984 3 57999999999 999999999887 5 44679999999998877668
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+||+|+++.. ....++.++.++|+|||.++.
T Consensus 171 ~~D~v~~~~~--------~~~~~l~~~~~~L~pgG~l~~ 201 (280)
T 1i9g_A 171 SVDRAVLDML--------APWEVLDAVSRLLVAGGVLMV 201 (280)
T ss_dssp CEEEEEEESS--------CGGGGHHHHHHHEEEEEEEEE
T ss_pred ceeEEEECCc--------CHHHHHHHHHHhCCCCCEEEE
Confidence 8999998642 334778889999999999884
No 158
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.46 E-value=4.8e-14 Score=128.36 Aligned_cols=110 Identities=15% Similarity=0.115 Sum_probs=86.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC----------------------------
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF---------------------------- 169 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~---------------------------- 169 (379)
...++.+|||||||+|.++..+++.+..+|+|+|+|+ |++.|++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4467789999999999999998887666999999999 99999988765421
Q ss_pred CCcE-EEEEcceeeccC-CC---CceeEEEEecCccccC-ChhhHHHHHHHHHhcccCCEEEEec
Q 016992 170 SNVI-TVLKGKIEEIEL-PV---TKVDIIISEWMGYFLL-FENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 170 ~~~i-~~~~~d~~~~~~-~~---~~~D~Iv~~~~~~~l~-~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..++ .++++|+.+... +. ++||+|++..+.+++. +...+..++.++.++|||||.++..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 197 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMV 197 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEE
Confidence 0127 999999988643 44 7899999865433111 4467889999999999999999854
No 159
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.45 E-value=1.5e-13 Score=127.27 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-----------------CCC------------
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-----------------GFS------------ 170 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~-----------------~~~------------ 170 (379)
.++.+|||||||+|.++..++..+..+|+|+|+|+ |++.|++++... +..
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 47789999999999966655554445999999999 999998865421 100
Q ss_pred CcEEEEEcceee-ccC-----CCCceeEEEEecCccccCC-hhhHHHHHHHHHhcccCCEEEEec
Q 016992 171 NVITVLKGKIEE-IEL-----PVTKVDIIISEWMGYFLLF-ENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 171 ~~i~~~~~d~~~-~~~-----~~~~~D~Iv~~~~~~~l~~-~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..+.++.+|+.+ +++ ++++||+|++..+.+++.. ..++..++.++.++|||||.|+..
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 126788889887 543 2356999999765333221 357889999999999999999854
No 160
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=3.5e-13 Score=116.39 Aligned_cols=100 Identities=23% Similarity=0.272 Sum_probs=83.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe-c
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE-W 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~-~ 197 (379)
..++.+|||+|||+|.++..+++.+. +|+++|+++ +++.+++++. ++.++++|+.+++++.++||+|++. .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~~~D~i~~~~~ 116 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQISETDFDLIVSAGN 116 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCCCCCCEEEEEECCC
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCCCCCceeEEEECCc
Confidence 35788999999999999999999865 999999999 9999988652 4889999999887777899999986 3
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.++ ........++..+.++|+|||.++.
T Consensus 117 ~~~~-~~~~~~~~~l~~~~~~l~~~G~l~~ 145 (195)
T 3cgg_A 117 VMGF-LAEDGREPALANIHRALGADGRAVI 145 (195)
T ss_dssp CGGG-SCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHhh-cChHHHHHHHHHHHHHhCCCCEEEE
Confidence 3222 2335668899999999999999884
No 161
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.45 E-value=2.4e-13 Score=122.09 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH------cCCCCcEEEEEcceee-cc--CCCCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA------NGFSNVITVLKGKIEE-IE--LPVTK 189 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~------~~~~~~i~~~~~d~~~-~~--~~~~~ 189 (379)
.++.+|||||||+|.++..+|+. +...|+|||+++ |++.|++++.. .++ .+|+++++|+.+ ++ ++.++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhCCCcC
Confidence 46679999999999999999985 456999999999 99999988764 345 469999999987 55 66689
Q ss_pred eeEEEEecCccccC--Chh---hHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLL--FEN---MLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~--~~~---~~~~~l~~~~~~LkpgG~lip 227 (379)
||.|++........ +.. ....++..+.++|||||.|+.
T Consensus 124 ~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 124 LTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp EEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred eeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 99998753221110 000 014789999999999999984
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=5.5e-13 Score=117.72 Aligned_cols=105 Identities=21% Similarity=0.189 Sum_probs=82.7
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcC-C-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-A-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g-~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
+.......++.+|||+|||+|.++..+++.+ . .+|+++|+++ +++.|++++...++. +++++++|+.......++|
T Consensus 69 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~f 147 (215)
T 2yxe_A 69 MCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEPLAPY 147 (215)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGGGCCE
T ss_pred HHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCCCCCe
Confidence 3344456788999999999999999999953 2 6999999999 999999999988885 4999999986433224789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
|+|++......+ . +.+.++|||||.++..
T Consensus 148 D~v~~~~~~~~~---~------~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 148 DRIYTTAAGPKI---P------EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp EEEEESSBBSSC---C------HHHHHTEEEEEEEEEE
T ss_pred eEEEECCchHHH---H------HHHHHHcCCCcEEEEE
Confidence 999986543322 1 4678999999998843
No 163
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.45 E-value=1.5e-13 Score=121.73 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=82.5
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---cCC-CC
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELP-VT 188 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~ 188 (379)
+.......++.+|||||||+|.++..+++.+. +|+|+|+++ +++.|+++ .++.++.+|+.++ +.. ..
T Consensus 44 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~ 115 (227)
T 3e8s_A 44 ILLAILGRQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGK 115 (227)
T ss_dssp HHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCC
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCC
Confidence 33333345678999999999999999999865 999999999 99999876 2467888888887 333 35
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+||+|++..+.+ ..++..+++++.++|||||+++..
T Consensus 116 ~fD~v~~~~~l~----~~~~~~~l~~~~~~L~pgG~l~~~ 151 (227)
T 3e8s_A 116 DYDLICANFALL----HQDIIELLSAMRTLLVPGGALVIQ 151 (227)
T ss_dssp CEEEEEEESCCC----SSCCHHHHHHHHHTEEEEEEEEEE
T ss_pred CccEEEECchhh----hhhHHHHHHHHHHHhCCCeEEEEE
Confidence 699999875433 366789999999999999999854
No 164
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.45 E-value=3.3e-13 Score=122.98 Aligned_cols=97 Identities=25% Similarity=0.344 Sum_probs=80.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCcc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~ 200 (379)
++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|+++.. .+ ++++|+.++++++++||+|++.....
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~-----~~--~~~~d~~~~~~~~~~fD~v~~~~~~~ 125 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV-----KN--VVEAKAEDLPFPSGAFEAVLALGDVL 125 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC-----SC--EEECCTTSCCSCTTCEEEEEECSSHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC-----CC--EEECcHHHCCCCCCCEEEEEEcchhh
Confidence 778999999999999999999865 999999999 9999988753 22 88899999888778999999853222
Q ss_pred ccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 201 FLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.+. .++..+++++.++|||||.++..
T Consensus 126 ~~~--~~~~~~l~~~~~~LkpgG~l~~~ 151 (260)
T 2avn_A 126 SYV--ENKDKAFSEIRRVLVPDGLLIAT 151 (260)
T ss_dssp HHC--SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcc--ccHHHHHHHHHHHcCCCeEEEEE
Confidence 221 34789999999999999999843
No 165
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.44 E-value=3.4e-13 Score=121.28 Aligned_cols=104 Identities=16% Similarity=0.130 Sum_probs=87.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--C-----CCCce
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--L-----PVTKV 190 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~-----~~~~~ 190 (379)
.++++|||||||+|..++.+++. + ..+|+++|+++ +++.|+++++..|+.++|+++++|+.+.. + +.++|
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 46789999999999999999984 3 47999999999 99999999999999778999999987642 2 13789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
|+|+++.. ......+++.+.++|+|||+++...+
T Consensus 149 D~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 149 DFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred CEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99998642 24567889999999999999986543
No 166
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.44 E-value=2.2e-13 Score=123.36 Aligned_cols=103 Identities=15% Similarity=0.172 Sum_probs=86.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-c-C-----CCCce
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E-L-----PVTKV 190 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-~-----~~~~~ 190 (379)
.++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|+++++..++.++|+++++|+.+. + + +.++|
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 46789999999999999999985 3 46999999999 9999999999999977899999999764 2 2 13789
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
|+|+++.. ......++..+.++|||||+++...
T Consensus 158 D~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998642 1456788999999999999998543
No 167
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.44 E-value=4.3e-13 Score=120.92 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=88.3
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||+|||+|.++..+++. ..+|+++|+++ +++.|++++...++..+++++.+|+.+..++.++||+
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~ 161 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHA 161 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSE
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccE
Confidence 344455678899999999999999999998 56999999999 9999999999998877899999999886534578999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|++++ +....++..+.++|+|||.++.
T Consensus 162 v~~~~--------~~~~~~l~~~~~~L~~gG~l~~ 188 (248)
T 2yvl_A 162 AFVDV--------REPWHYLEKVHKSLMEGAPVGF 188 (248)
T ss_dssp EEECS--------SCGGGGHHHHHHHBCTTCEEEE
T ss_pred EEECC--------cCHHHHHHHHHHHcCCCCEEEE
Confidence 99854 2334678888999999999884
No 168
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.43 E-value=1.5e-12 Score=116.31 Aligned_cols=103 Identities=18% Similarity=0.184 Sum_probs=77.6
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---CCCcee
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVD 191 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D 191 (379)
..+.+|.+|||+|||+|.++..+|+. | .++|+|+|+++ |++.+.+.++.. .++.++++|+..... ..++||
T Consensus 72 ~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D 148 (232)
T 3id6_C 72 NPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVD 148 (232)
T ss_dssp CSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEE
T ss_pred cCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceE
Confidence 34789999999999999999999984 3 57999999999 986665555443 469999999986531 136899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+|+++... ......++..+.++|||||.|+..
T Consensus 149 ~I~~d~a~-----~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 149 VLYVDIAQ-----PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEECCCC-----TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEecCCC-----hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99987531 123334455666699999999854
No 169
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.43 E-value=1.1e-13 Score=123.49 Aligned_cols=90 Identities=18% Similarity=0.122 Sum_probs=77.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce-eeccCC-CCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI-EEIELP-VTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~-~~~~D~Iv~~~ 197 (379)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+ +++.|+++ . .+++++++|+ ..++++ +++||+|++..
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN-----A-PHADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH-----C-TTSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh-----C-CCceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 5788999999999999999999865 999999999 99999987 2 4589999999 556666 68999999862
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
++..++.++.++|||||.++
T Consensus 120 ---------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ---------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ---------CCSGGGGGHHHHEEEEEEEE
T ss_pred ---------CHHHHHHHHHHHcCCCcEEE
Confidence 34567788889999999998
No 170
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.43 E-value=6.3e-13 Score=135.71 Aligned_cols=105 Identities=15% Similarity=0.093 Sum_probs=85.6
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHc------CCCCcEEEEEcceeeccCCCCc
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEAN------GFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~--~~v~~vD~s~-~~~~a~~~~~~~------~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
...++.+|||||||+|.++..+++.+. .+|+|||+++ |++.|++++... ++ .+++++++|+.++++++++
T Consensus 718 ~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~dLp~~d~s 796 (950)
T 3htx_A 718 RESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILEFDSRLHD 796 (950)
T ss_dssp HHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTSCCTTSCS
T ss_pred cccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHhCCcccCC
Confidence 345788999999999999999999752 6999999999 999999877643 44 4799999999999888889
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
||+|++..+..++. ......++.++.++|||| .++
T Consensus 797 FDlVV~~eVLeHL~-dp~l~~~L~eI~RvLKPG-~LI 831 (950)
T 3htx_A 797 VDIGTCLEVIEHME-EDQACEFGEKVLSLFHPK-LLI 831 (950)
T ss_dssp CCEEEEESCGGGSC-HHHHHHHHHHHHHTTCCS-EEE
T ss_pred eeEEEEeCchhhCC-hHHHHHHHHHHHHHcCCC-EEE
Confidence 99999965544332 233457899999999999 555
No 171
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.43 E-value=9.1e-13 Score=117.28 Aligned_cols=101 Identities=21% Similarity=0.189 Sum_probs=81.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEcceeeccCCCCceeE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~-g~-~~v~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
..++.+|||+|||+|.++..+++. |. .+|+++|+++ +++.|++++..+++ .++++++++|+.......++||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 568899999999999999999985 43 5999999999 99999999988764 35799999999866544578999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
|++..... .++..+.++|||||.++...
T Consensus 155 i~~~~~~~---------~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 155 IHVGAAAP---------VVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EEECSBBS---------SCCHHHHHTEEEEEEEEEEE
T ss_pred EEECCchH---------HHHHHHHHhcCCCcEEEEEE
Confidence 99865422 23356789999999998643
No 172
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.43 E-value=7.8e-13 Score=117.85 Aligned_cols=102 Identities=21% Similarity=0.259 Sum_probs=81.7
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc---CCCCcee
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVD 191 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D 191 (379)
....++.+|||+|||+|.++..+++. | ..+|+|+|+++ +++.++++++.+ .+++++++|+.+.. ...++||
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D 145 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVD 145 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEE
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCce
Confidence 34568899999999999999999985 4 37999999999 999999888755 46999999998742 1136899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+++.. .......++.++.++|||||.++.
T Consensus 146 ~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 146 VIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp EEEECCC-----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEE
Confidence 9998753 223334558999999999999884
No 173
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.43 E-value=7.7e-14 Score=123.56 Aligned_cols=105 Identities=17% Similarity=0.078 Sum_probs=79.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHH----HHcCCCCcEEEEEcceeeccCCCCceeEE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIV----EANGFSNVITVLKGKIEEIELPVTKVDII 193 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~----~~~~~~~~i~~~~~d~~~~~~~~~~~D~I 193 (379)
..++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.+.+.+ ...++ .+++++++|+.+++++++. |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGL-PNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCC-TTEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCC-CceEEEecchhhCCCCCCC-CEE
Confidence 467889999999999999999996 356999999999 998644333 23455 3699999999998877566 887
Q ss_pred EEecCccccC---ChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLL---FENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~---~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.... +... +..+...++.++.++|||||.++.
T Consensus 103 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 103 HVLMP-WGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp EEESC-CHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred EEEcc-chhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 74321 1111 122337889999999999999985
No 174
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.42 E-value=2.7e-13 Score=123.01 Aligned_cols=105 Identities=19% Similarity=0.168 Sum_probs=78.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---cCC---CCceeEE
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---ELP---VTKVDII 193 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~~---~~~~D~I 193 (379)
++.+|||+|||+|.++..+++. +..+|+|+|+++ |++.|++++..+++.++++++++|+.+. .++ +++||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5779999999999999988874 346999999999 9999999999999987899999998762 233 2589999
Q ss_pred EEecCccccCC-h------------hhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLF-E------------NMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~-~------------~~~~~~l~~~~~~LkpgG~lip 227 (379)
+++++ ++... + .....++..+.++|||||.+.+
T Consensus 145 ~~npp-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 145 MCNPP-FFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp EECCC-CC-------------------------CTTTTHHHHTHHHH
T ss_pred EECCC-CccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 99975 32221 0 0112456678899999998753
No 175
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.42 E-value=6.6e-13 Score=120.02 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=83.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcC-CCEEEEEecHH-HHHHHHHHHHHc--------CCCCcEEEEEcceee-cc--CC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAG-AAHVYAVECSQ-MANMAKQIVEAN--------GFSNVITVLKGKIEE-IE--LP 186 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g-~~~v~~vD~s~-~~~~a~~~~~~~--------~~~~~i~~~~~d~~~-~~--~~ 186 (379)
..++.+|||||||+|.+++.+++.+ ...|+|||+|+ +++.|++++..+ ++ .+++++++|+.+ ++ ++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~-~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF-QNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT-TTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC-CcEEEEeccHHHHHHHhcc
Confidence 3567899999999999999999965 35999999999 999999998876 77 469999999987 54 55
Q ss_pred CCceeEEEEecCccccCC-----hhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLLF-----ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~-----~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+.+|.|+.......... ......++..+.++|+|||.++.
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 678999986532211100 00014789999999999999984
No 176
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.42 E-value=3.4e-13 Score=120.24 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=86.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCC----Ccee
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPV----TKVD 191 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~----~~~D 191 (379)
.++.+|||+|||+|..++.+++. + ..+|+++|+++ +++.|++++..+++.++++++++|+.+.. +.. ++||
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 56789999999999999999984 3 56999999999 99999999999998778999999987642 211 6899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+|+++.. ......++..+.++|+|||.++...
T Consensus 148 ~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 148 VAVVDAD------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEECSC------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 9998753 1445788999999999999998543
No 177
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=4e-13 Score=129.45 Aligned_cols=107 Identities=18% Similarity=0.128 Sum_probs=85.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~Iv~~~ 197 (379)
.+|.+|||+|||+|.+++.+++.|+. |+++|+|+ +++.|+++++.+++.. ++.++|+.++. ++ +.||+|++++
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~~-~~fD~Ii~dp 288 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGLE-GPFHHVLLDP 288 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTCC-CCEEEEEECC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHhc-CCCCEEEECC
Confidence 46899999999999999999998875 99999999 9999999999999864 46699988753 23 4499999997
Q ss_pred CccccCC------hhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 198 MGYFLLF------ENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 198 ~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
+.+.... ......++..+.++|+|||.++..+++
T Consensus 289 P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 289 PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 5322111 123467888889999999999855443
No 178
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=3.9e-13 Score=120.89 Aligned_cols=102 Identities=22% Similarity=0.292 Sum_probs=85.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-c------------
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E------------ 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~------------ 184 (379)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++...++.++++++++|+.+. +
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 46789999999999999999985 3 46999999999 9999999999999877799999998763 1
Q ss_pred --CCC--CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 185 --LPV--TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 185 --~~~--~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++. ++||+|+++.. ......++..+.++|+|||+++..
T Consensus 139 ~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~ 180 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIAD 180 (239)
T ss_dssp TTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 111 68999997632 245678899999999999999854
No 179
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=7.1e-13 Score=118.77 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=86.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec----cCCC--Ccee
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----ELPV--TKVD 191 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~~~~--~~~D 191 (379)
.++.+|||||||+|..+..+++. + ..+|+++|+++ +++.|++++..+++.++|+++.+|+.+. +..+ ++||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 46679999999999999999984 3 46999999999 9999999999999877899999998653 2222 6899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
+|+++.. ......++..+.++|+|||+++....
T Consensus 151 ~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 151 LIFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEECSC------GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 9998642 14567889999999999999986443
No 180
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=2.4e-13 Score=122.53 Aligned_cols=102 Identities=12% Similarity=-0.043 Sum_probs=83.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-----CceeEE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-----TKVDII 193 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~D~I 193 (379)
..++.+|||||||+|.++..+++.+. +|+|+|+|+ +++.|++++. . .+++++++|+.+++... ..||+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~~~~d~v 128 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT---A-ANISYRLLDGLVPEQAAQIHSEIGDANI 128 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC---C-TTEEEEECCTTCHHHHHHHHHHHCSCEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc---c-cCceEEECcccccccccccccccCccEE
Confidence 56788999999999999999999866 999999999 9999998762 1 46999999998865431 248999
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++..+.+++ ...+...++.++.++|||||+++.
T Consensus 129 ~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~i 161 (245)
T 3ggd_A 129 YMRTGFHHI-PVEKRELLGQSLRILLGKQGAMYL 161 (245)
T ss_dssp EEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEEE
T ss_pred EEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 998664444 234778999999999999999773
No 181
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.41 E-value=4.3e-13 Score=126.95 Aligned_cols=102 Identities=20% Similarity=0.291 Sum_probs=80.4
Q ss_pred ccCCCCCCEEEEEcCCCchHHHHHHHc-CC-CEEEEEecHH-HHHHHHHHHHHcC----------CCCcEEEEEcceeec
Q 016992 117 NKFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQ-MANMAKQIVEANG----------FSNVITVLKGKIEEI 183 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~G~~~~~la~~-g~-~~v~~vD~s~-~~~~a~~~~~~~~----------~~~~i~~~~~d~~~~ 183 (379)
.....++.+|||+|||+|.++..+++. |. .+|+++|+++ +++.|++++...+ +..+++++++|+.+.
T Consensus 100 ~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~ 179 (336)
T 2b25_A 100 MMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGA 179 (336)
T ss_dssp HHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCC
T ss_pred hcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHc
Confidence 345678999999999999999999995 55 7999999999 9999999998632 235799999999886
Q ss_pred --cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 184 --ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 184 --~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
++++++||+|+++... ...++..+.++|+|||.++
T Consensus 180 ~~~~~~~~fD~V~~~~~~--------~~~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 180 TEDIKSLTFDAVALDMLN--------PHVTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp C-------EEEEEECSSS--------TTTTHHHHGGGEEEEEEEE
T ss_pred ccccCCCCeeEEEECCCC--------HHHHHHHHHHhcCCCcEEE
Confidence 3455689999986431 2237788899999999998
No 182
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.41 E-value=1.4e-12 Score=119.95 Aligned_cols=103 Identities=15% Similarity=0.163 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCC---chHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----------C
Q 016992 122 KDKVVLDVGAGT---GILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----------L 185 (379)
Q Consensus 122 ~~~~VLDlGcG~---G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----------~ 185 (379)
...+|||||||+ |.++..+++. +..+|+++|+|+ |++.|++++... .+++++++|+.+.. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccC
Confidence 447999999999 9888777664 446999999999 999999987432 56999999997631 3
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+..+||+|++..+.+++..+ ....+++++.+.|+|||.|+..
T Consensus 154 d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEE
T ss_pred CCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEE
Confidence 33589999987665555433 5889999999999999999854
No 183
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.41 E-value=3.3e-13 Score=130.03 Aligned_cols=108 Identities=21% Similarity=0.196 Sum_probs=89.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----CCCceeEEEEe
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----PVTKVDIIISE 196 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~Iv~~ 196 (379)
++.+|||+|||+|.+++.+++. +.+|+|+|+++ +++.|++++..+++.+ ++++++|+.++.. ...+||+|+++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 7889999999999999999997 67999999999 9999999999999965 9999999987632 14789999999
Q ss_pred cCccccCC------hhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 197 WMGYFLLF------ENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 197 ~~~~~l~~------~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
++.+.... ......++..+.++|+|||.++.+.++
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 76433211 134567888999999999999865443
No 184
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.41 E-value=4e-13 Score=127.19 Aligned_cols=96 Identities=19% Similarity=0.296 Sum_probs=83.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||+|||+|.+++. ++ ++.+|+|+|+|+ +++.|+++++.+++.++++++++|+.++. ++||+|+++++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~ 268 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK 268 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT
T ss_pred CCCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH
Confidence 5788999999999999999 87 678999999999 99999999999999778999999998875 789999998653
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+. ..++..+.++|+|||.++..
T Consensus 269 ~~-------~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 269 FA-------HKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp TG-------GGGHHHHHHHEEEEEEEEEE
T ss_pred hH-------HHHHHHHHHHcCCCCEEEEE
Confidence 22 26777888999999998843
No 185
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.40 E-value=2.9e-12 Score=120.96 Aligned_cols=105 Identities=17% Similarity=0.256 Sum_probs=88.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||+|||+|.++..+++. +..+++++|++.+++.|++++...++.++++++.+|+.+.+++ ..||+|++..+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYG-NDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC-SCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCC-CCCcEEEEcchh
Confidence 67789999999999999999985 4569999999999999999999988877899999999887666 459999986543
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.+ .......+++++.+.|+|||+++.
T Consensus 243 ~~~-~~~~~~~~l~~~~~~L~pgG~l~i 269 (335)
T 2r3s_A 243 HHF-DVATCEQLLRKIKTALAVEGKVIV 269 (335)
T ss_dssp GGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccC-CHHHHHHHHHHHHHhCCCCcEEEE
Confidence 332 224567999999999999998874
No 186
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.40 E-value=2.5e-12 Score=122.39 Aligned_cols=111 Identities=10% Similarity=0.123 Sum_probs=91.4
Q ss_pred HHhccCCCC-CCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCC
Q 016992 114 IYQNKFLFK-DKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVT 188 (379)
Q Consensus 114 i~~~~~~~~-~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~ 188 (379)
+.......+ +.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++|+++.+|+.+.+ .+ +
T Consensus 170 ~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~ 247 (352)
T 3mcz_A 170 VVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG-G 247 (352)
T ss_dssp HHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT-C
T ss_pred HHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC-C
Confidence 444444555 789999999999999999984 5579999999 7 99999999999998888999999998876 54 6
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.||+|++..+.+.+ .......+++++.+.|+|||+++.
T Consensus 248 ~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i 285 (352)
T 3mcz_A 248 AADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALLI 285 (352)
T ss_dssp CEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 79999987654333 233458999999999999999884
No 187
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.40 E-value=3.7e-12 Score=121.63 Aligned_cols=111 Identities=15% Similarity=0.151 Sum_probs=90.5
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
.+.......++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...+++++++++.+|+.+.+++ .+
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--~~ 257 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP--EA 257 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC--CC
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC--CC
Confidence 3444445667889999999999999999985 4569999999 9 9999999999999888899999999887665 34
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|++..+.+.+. ......+++++.+.|||||+++.
T Consensus 258 D~v~~~~vlh~~~-d~~~~~~l~~~~~~L~pgG~l~i 293 (359)
T 1x19_A 258 DAVLFCRILYSAN-EQLSTIMCKKAFDAMRSGGRLLI 293 (359)
T ss_dssp SEEEEESCGGGSC-HHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CEEEEechhccCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 9999875533331 23378999999999999999874
No 188
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.39 E-value=3.5e-12 Score=122.32 Aligned_cols=111 Identities=22% Similarity=0.171 Sum_probs=88.9
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
+.......++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++|+++.+|+.+ +++ ..||
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D 250 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP-VTAD 250 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-CCEE
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC-CCCC
Confidence 344444567889999999999999999985 3469999999 8 999999999999987789999999876 344 3599
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+|++..+.+.+. ......+++++.++|+|||+++..
T Consensus 251 ~v~~~~vl~~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 286 (374)
T 1qzz_A 251 VVLLSFVLLNWS-DEDALTILRGCVRALEPGGRLLVL 286 (374)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeccccCCC-HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999876543331 223358999999999999998853
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.39 E-value=1.3e-12 Score=116.30 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=81.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcC------CCEEEEEecHH-HHHHHHHHHHHcCC----CCcEEEEEcceeecc---
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAG------AAHVYAVECSQ-MANMAKQIVEANGF----SNVITVLKGKIEEIE--- 184 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g------~~~v~~vD~s~-~~~~a~~~~~~~~~----~~~i~~~~~d~~~~~--- 184 (379)
...++.+|||||||+|.++..+++.. ..+|+++|+++ +++.|++++...++ ..+++++++|+.+..
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 45688999999999999999999853 25999999999 99999999998873 357999999998754
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...++||+|++..... .++..+.++|||||+++.
T Consensus 157 ~~~~~~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 157 KKELGLFDAIHVGASAS---------ELPEILVDLLAENGKLII 191 (227)
T ss_dssp HHHHCCEEEEEECSBBS---------SCCHHHHHHEEEEEEEEE
T ss_pred CccCCCcCEEEECCchH---------HHHHHHHHhcCCCcEEEE
Confidence 3347899999865422 134667899999999884
No 190
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.39 E-value=1.7e-12 Score=124.18 Aligned_cols=104 Identities=18% Similarity=0.164 Sum_probs=87.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec--cCCCCceeEEEEe
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISE 196 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~Iv~~ 196 (379)
..+.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++|+++.+|+.+. +++ ++||+|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 45679999999999999999884 4569999999 8 9999999999888878899999999986 355 789999987
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+.+.+ .......+++++.+.|||||+++.
T Consensus 256 ~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i 285 (363)
T 3dp7_A 256 QFLDCF-SEEEVISILTRVAQSIGKDSKVYI 285 (363)
T ss_dssp SCSTTS-CHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred chhhhC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 653333 234556889999999999999874
No 191
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.39 E-value=8e-13 Score=125.50 Aligned_cols=110 Identities=20% Similarity=0.176 Sum_probs=87.6
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
+.......++.+|||+|||+|.++..+++.+. .+|+++|+|+ +++.|++++..+++. ++++.+|+.+.. .++||
T Consensus 188 ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~--~~~fD 263 (343)
T 2pjd_A 188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV--KGRFD 263 (343)
T ss_dssp HHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC--CSCEE
T ss_pred HHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc--cCCee
Confidence 44334344567999999999999999999753 5999999999 999999999998874 577888887653 47999
Q ss_pred EEEEecCcccc--CChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFL--LFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l--~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+++++.+.. .+......++.++.++|||||.++.
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 99998753321 1234568899999999999999884
No 192
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.39 E-value=4.5e-12 Score=111.09 Aligned_cols=100 Identities=25% Similarity=0.226 Sum_probs=82.1
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
...++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++..+++ +++++++|+.+++ ++||+|++++
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~---~~~D~v~~~~ 120 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN---SRVDIVIMNP 120 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---CCCSEEEECC
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---CCCCEEEEcC
Confidence 3457889999999999999999998777999999999 99999999988887 5999999999863 5899999997
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
+ ++....+....+++.+.++| ||.++
T Consensus 121 p-~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 121 P-FGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp C-CSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred C-CccccCCchHHHHHHHHHhc--CcEEE
Confidence 5 33333344467788888887 66444
No 193
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.39 E-value=1.8e-12 Score=116.30 Aligned_cols=104 Identities=21% Similarity=0.238 Sum_probs=80.7
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-Ccee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D 191 (379)
+.......++.+|||+|||+|.++..+++.+..+|+++|+++ +++.|++++...++.+ ++++.+|+ ...++. .+||
T Consensus 83 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~-~~~~~~~~~fD 160 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDG-SKGFPPKAPYD 160 (235)
T ss_dssp HHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCG-GGCCGGGCCEE
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCc-ccCCCCCCCcc
Confidence 333345678889999999999999999995326999999999 9999999999998854 99999997 333332 4599
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+|++......+ ...+.+.|+|||+++..
T Consensus 161 ~Ii~~~~~~~~---------~~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 161 VIIVTAGAPKI---------PEPLIEQLKIGGKLIIP 188 (235)
T ss_dssp EEEECSBBSSC---------CHHHHHTEEEEEEEEEE
T ss_pred EEEECCcHHHH---------HHHHHHhcCCCcEEEEE
Confidence 99986532222 13567899999998843
No 194
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.39 E-value=7.3e-13 Score=123.13 Aligned_cols=109 Identities=17% Similarity=0.134 Sum_probs=82.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcceeec-cCCCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 194 (379)
..+.+|||||||+|.++..+++. +..+|++||+++ +++.|++++.. .++ ..+++++++|+.+. +...++||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 35689999999999999999986 668999999999 99999998865 333 35799999998774 33347899999
Q ss_pred EecCccccCChh--hHHHHHHHHHhcccCCEEEEecC
Q 016992 195 SEWMGYFLLFEN--MLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 195 ~~~~~~~l~~~~--~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+++......... ....+++.+.++|+|||+++...
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 986432111001 12678899999999999999653
No 195
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.38 E-value=1.7e-12 Score=124.63 Aligned_cols=104 Identities=20% Similarity=0.187 Sum_probs=85.1
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
+.... ..++.+|||+|||+|.+++.++..+. .+|+|+|+++ |++.|++++..+|+.++++++++|+.+++.++++||
T Consensus 210 l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD 288 (373)
T 3tm4_A 210 MIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVD 288 (373)
T ss_dssp HHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEE
T ss_pred HHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcC
Confidence 33334 57888999999999999999999754 4999999999 999999999999997789999999999987778999
Q ss_pred EEEEecCccccCC------hhhHHHHHHHHHhcc
Q 016992 192 IIISEWMGYFLLF------ENMLNTVLYARDKWL 219 (379)
Q Consensus 192 ~Iv~~~~~~~l~~------~~~~~~~l~~~~~~L 219 (379)
+|+++++ |+... ......+++.+.++|
T Consensus 289 ~Ii~npP-yg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 289 FAISNLP-YGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp EEEEECC-CC------CCHHHHHHHHHHHHHHHE
T ss_pred EEEECCC-CCcccCcchhHHHHHHHHHHHHHHHc
Confidence 9999975 33221 122367788888888
No 196
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.38 E-value=5.8e-12 Score=120.74 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=90.5
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
..+.......++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++|+++.+|+. .+++ ..
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p-~~ 268 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIP-DG 268 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCC-SS
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCC-CC
Confidence 34444455567889999999999999999985 4569999999 8 99999999999998889999999998 4555 38
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
||+|++..+.+.+ .......+++++.+.|+|||+++.
T Consensus 269 ~D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 269 ADVYLIKHVLHDW-DDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp CSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred ceEEEhhhhhccC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 9999987654333 122334899999999999999984
No 197
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.38 E-value=8.1e-13 Score=124.65 Aligned_cols=108 Identities=16% Similarity=0.169 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--CC-CCcEEEEEcceeecc--CCCCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--GF-SNVITVLKGKIEEIE--LPVTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~~--~~~~~~D~I 193 (379)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ ..+++++++|+.+.. .+.++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 45689999999999999999986 457999999999 999999988753 44 257999999998752 334789999
Q ss_pred EEecCccccCChh-hHHHHHHHHHhcccCCEEEEec
Q 016992 194 ISEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 194 v~~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++++......... ....++..+.++|+|||+++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9976422111111 1368899999999999999964
No 198
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.38 E-value=3.3e-12 Score=120.54 Aligned_cols=105 Identities=19% Similarity=0.053 Sum_probs=86.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..++.+|||||||+|.++..+++ .+..+++++|+ + +++.|++++...++.++|+++.+|+. .+++ ..||+|++..
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p-~~~D~v~~~~ 243 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLP-AGAGGYVLSA 243 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCC-CSCSEEEEES
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCC-CCCcEEEEeh
Confidence 34568999999999999999988 45569999999 8 99999999999998888999999997 3455 3899999876
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.+.+. ......+++++.+.|+|||+++..
T Consensus 244 vlh~~~-~~~~~~~l~~~~~~L~pgG~l~i~ 273 (332)
T 3i53_A 244 VLHDWD-DLSAVAILRRCAEAAGSGGVVLVI 273 (332)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhccCC-HHHHHHHHHHHHHhcCCCCEEEEE
Confidence 543332 233579999999999999999853
No 199
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.37 E-value=4.5e-13 Score=119.58 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=78.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecH-H-HHHHH---HHHHHHcCCCCcEEEEEcceeeccCC-CCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECS-Q-MANMA---KQIVEANGFSNVITVLKGKIEEIELP-VTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s-~-~~~~a---~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~I 193 (379)
.++.+|||||||+|.++..+++ .+..+|+|||+| + |++.| ++++...+++ ++.++++|+++++.. ...+|.|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~i 101 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADSI 101 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEEE
Confidence 5788999999999999999997 345689999999 6 87777 7777777874 599999999988532 2456666
Q ss_pred EEecCccccC-C-hhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLL-F-ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~-~-~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++........ + ......++.++.++|||||.++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 102 SILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 6543211110 0 01125688999999999999986
No 200
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.37 E-value=6e-13 Score=122.82 Aligned_cols=105 Identities=19% Similarity=0.152 Sum_probs=82.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc--CC--------CCcEEEEEcceeec-cCCCC
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN--GF--------SNVITVLKGKIEEI-ELPVT 188 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~--~~--------~~~i~~~~~d~~~~-~~~~~ 188 (379)
.++.+|||||||+|.++..+++.+..+|++||+++ +++.|++++ .. ++ ..+++++.+|+.+. .. .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 45689999999999999999988767999999999 999999987 33 32 36799999998764 22 47
Q ss_pred ceeEEEEecCccccCChhh--HHHHHHHHHhcccCCEEEEec
Q 016992 189 KVDIIISEWMGYFLLFENM--LNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~--~~~~l~~~~~~LkpgG~lip~ 228 (379)
+||+|+++....... ... ...+++.+.++|+|||+++..
T Consensus 152 ~fD~Ii~d~~~~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 152 GFDVIIADSTDPVGP-AKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp CEEEEEEECCCCC------TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 899999987532111 111 267889999999999999854
No 201
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.37 E-value=1.4e-12 Score=115.70 Aligned_cols=96 Identities=24% Similarity=0.276 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee--ccCCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE--IELPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~~D~Iv~~~ 197 (379)
.++.+|||+|||+|.++..+++.| .+|+|+|+++ +++.++++. .+++++|+.+ .++++++||+|++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~~ 101 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFGD 101 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEES
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEECC
Confidence 578899999999999999999886 6999999999 999988643 3688899876 445568999999865
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+ +.+..+...++.++.++|+|||.++..
T Consensus 102 ~---l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 102 V---LEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp C---GGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred h---hhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 4 333356789999999999999999853
No 202
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.37 E-value=7.2e-13 Score=124.50 Aligned_cols=108 Identities=18% Similarity=0.181 Sum_probs=83.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcceeec-cCCCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 194 (379)
.++.+|||||||+|.++..+++. +..+|+++|+++ +++.|++++.. +++ ..+++++++|+.+. +...++||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 35689999999999999999986 567999999999 99999998765 233 35799999998774 22247899999
Q ss_pred EecCccccCChhhH-HHHHHHHHhcccCCEEEEec
Q 016992 195 SEWMGYFLLFENML-NTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 195 ~~~~~~~l~~~~~~-~~~l~~~~~~LkpgG~lip~ 228 (379)
++............ ..+++.+.+.|+|||+++..
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 98642211111111 68899999999999999853
No 203
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.36 E-value=5.7e-13 Score=122.58 Aligned_cols=104 Identities=22% Similarity=0.198 Sum_probs=75.2
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEE-EEcceeecc---CC
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITV-LKGKIEEIE---LP 186 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~-~~~d~~~~~---~~ 186 (379)
.++.......++.+|||||||||.++..+++.|+.+|+|||+++ |++.+.+.- .++.. ...++..+. ++
T Consensus 75 ~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~------~rv~~~~~~ni~~l~~~~l~ 148 (291)
T 3hp7_A 75 KALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD------DRVRSMEQYNFRYAEPVDFT 148 (291)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC------TTEEEECSCCGGGCCGGGCT
T ss_pred HHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC------cccceecccCceecchhhCC
Confidence 33444333457889999999999999999999888999999999 998854321 23332 234554443 34
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+||+|+++.... .+..++.++.++|||||.++.
T Consensus 149 ~~~fD~v~~d~sf~------sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 149 EGLPSFASIDVSFI------SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp TCCCSEEEECCSSS------CGGGTHHHHHHHSCTTCEEEE
T ss_pred CCCCCEEEEEeeHh------hHHHHHHHHHHHcCcCCEEEE
Confidence 34599999875321 247889999999999999984
No 204
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.36 E-value=8.8e-13 Score=121.92 Aligned_cols=84 Identities=25% Similarity=0.350 Sum_probs=71.3
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
+.|.......++.+|||||||+|.++..+++.+. +|+|+|+++ |++.+++++...++.++++++++|+.+++++ .|
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~f 94 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FF 94 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CC
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hh
Confidence 3344455667889999999999999999999854 999999999 9999999987776656799999999987664 79
Q ss_pred eEEEEecC
Q 016992 191 DIIISEWM 198 (379)
Q Consensus 191 D~Iv~~~~ 198 (379)
|+|+++++
T Consensus 95 D~vv~nlp 102 (285)
T 1zq9_A 95 DTCVANLP 102 (285)
T ss_dssp SEEEEECC
T ss_pred cEEEEecC
Confidence 99999864
No 205
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.36 E-value=2.2e-12 Score=114.34 Aligned_cols=90 Identities=23% Similarity=0.270 Sum_probs=76.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCcc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGY 200 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~ 200 (379)
++.+|||+|||+|.++..+++. +|+|+++ +++.++++ +++++++|+.+++++.++||+|++..+.+
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 113 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTTIC 113 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESCGG
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcchHh
Confidence 3789999999999998887654 9999999 99999875 37899999998887778999999875433
Q ss_pred ccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 201 FLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 201 ~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+..++..++.++.++|+|||.++.
T Consensus 114 ---~~~~~~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 114 ---FVDDPERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp ---GSSCHHHHHHHHHHHEEEEEEEEE
T ss_pred ---hccCHHHHHHHHHHHcCCCcEEEE
Confidence 336678999999999999999984
No 206
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.36 E-value=6.5e-13 Score=129.39 Aligned_cols=113 Identities=18% Similarity=0.237 Sum_probs=86.8
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEE-EEEcceeeccC
Q 016992 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVIT-VLKGKIEEIEL 185 (379)
Q Consensus 108 ~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~-~~~~d~~~~~~ 185 (379)
..+.+.+.......++.+|||||||+|.++..+++.|. +|+|+|+|+ +++.|+++ ++..... +...++..+++
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhccc
Confidence 44555666666667889999999999999999999876 999999999 99998875 4322111 22344555555
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++++||+|++..+ +.+..++..+++++.++|||||+++..
T Consensus 168 ~~~~fD~I~~~~v---l~h~~d~~~~l~~~~r~LkpgG~l~i~ 207 (416)
T 4e2x_A 168 TEGPANVIYAANT---LCHIPYVQSVLEGVDALLAPDGVFVFE 207 (416)
T ss_dssp HHCCEEEEEEESC---GGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEEECCh---HHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5689999998755 444478899999999999999999853
No 207
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.36 E-value=6.4e-12 Score=119.87 Aligned_cols=109 Identities=23% Similarity=0.256 Sum_probs=87.6
Q ss_pred HhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 115 YQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 115 ~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
.......++.+|||||||+|.++..+++. +..+++++|+ + +++.|++++...++.++++++.+|+.+ +++ ..||+
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~ 252 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP-RKADA 252 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-SCEEE
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCC-CCccE
Confidence 33344567889999999999999999985 3469999999 8 999999999999987789999999876 344 45999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|++..+.+.+ .......+++++.+.|+|||+++.
T Consensus 253 v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i 286 (360)
T 1tw3_A 253 IILSFVLLNW-PDHDAVRILTRCAEALEPGGRILI 286 (360)
T ss_dssp EEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEEcccccCC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9987653332 122336899999999999999884
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.35 E-value=3.3e-12 Score=122.62 Aligned_cols=100 Identities=11% Similarity=0.166 Sum_probs=84.3
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-ccC-CCCceeEEEE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IEL-PVTKVDIIIS 195 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~~D~Iv~ 195 (379)
..++.+|||+| |+|.+++.+++.+. .+|+++|+++ |++.|+++++.+|+. +|+++++|+.+ ++. ..++||+|++
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 34688999999 99999999998765 7999999999 999999999999986 79999999988 553 2368999999
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEE
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIV 225 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 225 (379)
+++ +.. .....++..+.++|||||.+
T Consensus 248 ~~p-~~~---~~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 248 DPP-ETL---EAIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp CCC-SSH---HHHHHHHHHHHHTBCSTTCE
T ss_pred CCC-Cch---HHHHHHHHHHHHHcccCCeE
Confidence 875 222 12578999999999999943
No 209
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.35 E-value=1.7e-12 Score=119.35 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--CC-CCcEEEEEcceeec-cCCCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--GF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 194 (379)
..+.+|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ ..+++++.+|+.+. ....++||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 35689999999999999999986 678999999999 999999987652 34 35799999998774 33347899999
Q ss_pred EecCccccCChh-hHHHHHHHHHhcccCCEEEEecC
Q 016992 195 SEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 195 ~~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+++......... ....+++.+.+.|+|||+++...
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 986532111000 12578889999999999998543
No 210
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.35 E-value=2.6e-12 Score=119.84 Aligned_cols=107 Identities=20% Similarity=0.101 Sum_probs=81.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH---cCCCCcEEEEEcceeeccC--CCCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA---NGFSNVITVLKGKIEEIEL--PVTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~---~~~~~~i~~~~~d~~~~~~--~~~~~D~I 193 (379)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++.. .....+++++.+|+.++.. +.++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 46789999999999999999986 457999999999 99999998743 1123579999999988653 35889999
Q ss_pred EEecCccccCChhhH--HHHHHHHHhcccCCEEEEec
Q 016992 194 ISEWMGYFLLFENML--NTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 194 v~~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lip~ 228 (379)
+++....... ...+ ..+++.+.++|||||+++..
T Consensus 174 i~d~~~~~~~-~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 174 IIDTTDPAGP-ASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp EEECC----------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCCCcccc-chhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 9986432211 1111 57899999999999999853
No 211
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.35 E-value=7e-13 Score=124.08 Aligned_cols=109 Identities=21% Similarity=0.228 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--CC-CCcEEEEEcceeec-cCCCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--GF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~--~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 194 (379)
..+.+|||||||+|.++..+++. +..+|++||+++ +++.|++++... ++ ..+++++.+|+.+. ....++||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 35679999999999999999986 457999999999 999999988653 33 36799999999774 22347899999
Q ss_pred EecCccccCChhhH-HHHHHHHHhcccCCEEEEecC
Q 016992 195 SEWMGYFLLFENML-NTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 195 ~~~~~~~l~~~~~~-~~~l~~~~~~LkpgG~lip~~ 229 (379)
++............ ..+++.+.++|+|||+++...
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 97643211111111 688999999999999998654
No 212
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=4.6e-12 Score=116.08 Aligned_cols=105 Identities=18% Similarity=0.219 Sum_probs=79.9
Q ss_pred CCCEEEEEcCCCch----HHHHHHHc-C----CCEEEEEecHH-HHHHHHHHHH--------------H---------cC
Q 016992 122 KDKVVLDVGAGTGI----LSLFCAKA-G----AAHVYAVECSQ-MANMAKQIVE--------------A---------NG 168 (379)
Q Consensus 122 ~~~~VLDlGcG~G~----~~~~la~~-g----~~~v~~vD~s~-~~~~a~~~~~--------------~---------~~ 168 (379)
++.+|||+|||||. +++.+++. | ..+|+|+|+|+ |++.|++.+. + .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999997 67777764 4 23899999999 9999998641 0 00
Q ss_pred -------CCCcEEEEEcceeeccCC-CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 169 -------FSNVITVLKGKIEEIELP-VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 169 -------~~~~i~~~~~d~~~~~~~-~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+..+|.|.++|+.+.+++ .++||+|+|..+..++ .......++..+.+.|+|||+++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEE
Confidence 013699999999886554 4789999996553333 334558999999999999999984
No 213
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.34 E-value=7.1e-13 Score=119.15 Aligned_cols=97 Identities=9% Similarity=0.096 Sum_probs=77.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-----CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---cC-CCCcee
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-----GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---EL-PVTKVD 191 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-----g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---~~-~~~~~D 191 (379)
++.+|||||||+|..+..+++. +..+|+|||+++ |++.|+ ++..+|+++++|+.+. +. ...+||
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~fD 154 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAHP 154 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCCC
Confidence 5679999999999999999986 346999999999 998887 2235799999999884 43 224799
Q ss_pred EEEEecCccccCChhhHHHHHHHHHh-cccCCEEEEecCC
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDK-WLVDDGIVLPDKA 230 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~-~LkpgG~lip~~~ 230 (379)
+|+++.. + ..+..++.++.+ +|||||+++....
T Consensus 155 ~I~~d~~-~-----~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 155 LIFIDNA-H-----ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEEESS-C-----SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEEECCc-h-----HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 9998753 1 256788999997 9999999996543
No 214
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.34 E-value=4.9e-12 Score=119.46 Aligned_cols=106 Identities=19% Similarity=0.161 Sum_probs=86.5
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
....+ .+|||+|||+|.++..+++. +..+++++|+ + +++.|++++...++.++|+++.+|+.+ +++ ++||+|++
T Consensus 164 ~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~ 239 (334)
T 2ip2_A 164 LDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLL 239 (334)
T ss_dssp SCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEE
T ss_pred CCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEE
Confidence 34445 89999999999999999984 4569999999 9 999999998887777789999999987 555 78999998
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..+.+.+ .......+++++.+.|+|||+++..
T Consensus 240 ~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 271 (334)
T 2ip2_A 240 SRIIGDL-DEAASLRLLGNCREAMAGDGRVVVI 271 (334)
T ss_dssp ESCGGGC-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred chhccCC-CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7653332 2234459999999999999998854
No 215
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.34 E-value=3.6e-12 Score=113.61 Aligned_cols=98 Identities=16% Similarity=0.195 Sum_probs=78.7
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHH-cCC------CEEEEEecHH-HHHHHHHHHHHcC-----CCCcEEEEEcceeeccC
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAK-AGA------AHVYAVECSQ-MANMAKQIVEANG-----FSNVITVLKGKIEEIEL 185 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~-~g~------~~v~~vD~s~-~~~~a~~~~~~~~-----~~~~i~~~~~d~~~~~~ 185 (379)
...++.+|||+|||+|.++..+++ .+. .+|+++|+++ +++.|++++...+ . .+++++++|+.+ .+
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~-~~ 158 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS-GQLLIVEGDGRK-GY 158 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH-TSEEEEESCGGG-CC
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC-CceEEEECCccc-CC
Confidence 356788999999999999999998 443 5999999999 9999999988765 3 469999999987 33
Q ss_pred C-CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 P-VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~-~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+ .++||+|++...... +..++.++|||||+++.
T Consensus 159 ~~~~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 159 PPNAPYNAIHVGAAAPD---------TPTELINQLASGGRLIV 192 (227)
T ss_dssp GGGCSEEEEEECSCBSS---------CCHHHHHTEEEEEEEEE
T ss_pred CcCCCccEEEECCchHH---------HHHHHHHHhcCCCEEEE
Confidence 3 268999998654322 22667899999999884
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.34 E-value=2.1e-12 Score=120.10 Aligned_cols=104 Identities=12% Similarity=0.179 Sum_probs=81.2
Q ss_pred CEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CCCCceeEEEEecCc
Q 016992 124 KVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LPVTKVDIIISEWMG 199 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~Iv~~~~~ 199 (379)
.+|||||||+|.++..+++ .+..+|++||+++ +++.|++++.... ..+++++.+|+.++. .+.++||+|+++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 4999999999999999999 5556999999999 9999999875432 357999999998763 335789999998643
Q ss_pred cccCChh-hHHHHHHHHHhcccCCEEEEec
Q 016992 200 YFLLFEN-MLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~-~~~~~l~~~~~~LkpgG~lip~ 228 (379)
....... ....+++.+.++|+|||+++..
T Consensus 170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~ 199 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAPGGLYVAN 199 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 2211111 1268899999999999999843
No 217
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.34 E-value=3.1e-12 Score=119.28 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=82.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcceeec-cCCCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEI-ELPVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~-~~~~~~~D~Iv 194 (379)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++.. .++ ..+++++.+|+.+. +...++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 45689999999999999999986 457999999999 99999998876 344 36799999999773 33347899999
Q ss_pred EecCccccCCh-hhHHHHHHHHHhcccCCEEEEec
Q 016992 195 SEWMGYFLLFE-NMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 195 ~~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
++......... .....+++.+.++|+|||+++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 208 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ 208 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEe
Confidence 98643211000 01246889999999999999853
No 218
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.33 E-value=2e-12 Score=119.90 Aligned_cols=107 Identities=16% Similarity=0.199 Sum_probs=80.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcC---C-CCcEEEEEcceeecc-CCCCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANG---F-SNVITVLKGKIEEIE-LPVTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~---~-~~~i~~~~~d~~~~~-~~~~~~D~I 193 (379)
.++++|||||||+|.++..+++. +..+|++||+++ +++.|++++...+ + ..+++++.+|+.+.. ...++||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45679999999999999999996 567999999999 9999999987642 2 247999999987753 235789999
Q ss_pred EEecCccccCChhhH--HHHHHHHHhcccCCEEEEec
Q 016992 194 ISEWMGYFLLFENML--NTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 194 v~~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lip~ 228 (379)
+++....... ...+ ..+++.+.+.|+|||+++..
T Consensus 162 i~D~~~p~~~-~~~l~~~~f~~~~~~~LkpgG~lv~~ 197 (294)
T 3adn_A 162 ISDCTDPIGP-GESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCccCc-chhccHHHHHHHHHHhcCCCCEEEEe
Confidence 9976432211 1112 67899999999999999843
No 219
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.33 E-value=2.1e-12 Score=109.98 Aligned_cols=92 Identities=15% Similarity=0.160 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+ |++. .++++++++|+.+ ++++++||+|+++++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~- 87 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES----------HRGGNLVRADLLC-SINQESVDVVVFNPP- 87 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT----------CSSSCEEECSTTT-TBCGGGCSEEEECCC-
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc----------ccCCeEEECChhh-hcccCCCCEEEECCC-
Confidence 467799999999999999999986 999999999 9887 2568999999987 444589999999864
Q ss_pred cccCC-------hhhHHHHHHHHHhcccCCEEEEe
Q 016992 200 YFLLF-------ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 200 ~~l~~-------~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.... ......++..+.+.| |||.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~ 121 (170)
T 3q87_B 88 YVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYL 121 (170)
T ss_dssp CBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEE
T ss_pred CccCCccccccCCcchHHHHHHHHhhC-CCCEEEE
Confidence 32111 112345677777777 9999874
No 220
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.33 E-value=2.4e-12 Score=120.69 Aligned_cols=108 Identities=17% Similarity=0.142 Sum_probs=84.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHH--cC-C-CCcEEEEEcceeec-cCCCCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEA--NG-F-SNVITVLKGKIEEI-ELPVTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~--~~-~-~~~i~~~~~d~~~~-~~~~~~~D~I 193 (379)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++.. .+ + ..+++++.+|+.+. +...++||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 45689999999999999999986 567999999999 99999998865 22 2 35799999999874 3334789999
Q ss_pred EEecCccc-cCC-hhh--HHHHHHHHHhcccCCEEEEec
Q 016992 194 ISEWMGYF-LLF-ENM--LNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 194 v~~~~~~~-l~~-~~~--~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++..... ... ... ...+++.+.++|+|||+++..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 194 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence 99865322 001 011 368899999999999999864
No 221
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.29 E-value=8.6e-12 Score=115.13 Aligned_cols=108 Identities=16% Similarity=0.123 Sum_probs=84.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcC--C-CCcEEEEEcceeecc-CCCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANG--F-SNVITVLKGKIEEIE-LPVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~--~-~~~i~~~~~d~~~~~-~~~~~~D~Iv 194 (379)
.++.+|||||||+|.++..+++. +..+|++||+++ +++.|++++...+ + ..+++++.+|+.+.. ...++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 45689999999999999999986 457999999999 9999999876432 2 257999999997742 2247899999
Q ss_pred EecCccccCChhhH--HHHHHHHHhcccCCEEEEecC
Q 016992 195 SEWMGYFLLFENML--NTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 195 ~~~~~~~l~~~~~~--~~~l~~~~~~LkpgG~lip~~ 229 (379)
++....... ...+ ..+++.+.+.|+|||+++...
T Consensus 157 ~d~~~~~~~-~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIGP-AETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTTG-GGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCc-chhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 986432211 1222 688999999999999998543
No 222
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.29 E-value=1.4e-11 Score=107.51 Aligned_cols=91 Identities=20% Similarity=0.103 Sum_probs=71.8
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
...++.+|||+|||+|.++..+++.|..+|+|+|+++ +++.|++++. +++++++|+.+++ ++||+|++++
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~---~~~D~v~~~~ 118 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS---GKYDTWIMNP 118 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---CCEEEEEECC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---CCeeEEEECC
Confidence 3457889999999999999999998777899999999 9999998764 4899999998864 6899999987
Q ss_pred CccccCChhhHHHHHHHHHhcc
Q 016992 198 MGYFLLFENMLNTVLYARDKWL 219 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~L 219 (379)
+.+.+.. +....+++.+.+.|
T Consensus 119 p~~~~~~-~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 119 PFGSVVK-HSDRAFIDKAFETS 139 (200)
T ss_dssp CC--------CHHHHHHHHHHE
T ss_pred CchhccC-chhHHHHHHHHHhc
Confidence 6433322 33356788888877
No 223
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.29 E-value=6.2e-12 Score=106.60 Aligned_cols=99 Identities=18% Similarity=0.250 Sum_probs=76.0
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-CC-CEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeecc--------CCC
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA-AHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE--------LPV 187 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g~-~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--------~~~ 187 (379)
....++.+|||+|||+|.++..+++. |. .+|+|+|+++++. + .+++++++|+.+.+ +++
T Consensus 18 ~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~----------~-~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 18 KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDP----------I-VGVDFLQGDFRDELVMKALLERVGD 86 (180)
T ss_dssp CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCCC----------C-TTEEEEESCTTSHHHHHHHHHHHTT
T ss_pred CCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECccccc----------c-CcEEEEEcccccchhhhhhhccCCC
Confidence 33578889999999999999999986 54 7999999998221 1 45999999998876 556
Q ss_pred CceeEEEEecCccccCCh--h------hHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFE--N------MLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~--~------~~~~~l~~~~~~LkpgG~lip 227 (379)
++||+|+++.+.+..... . ....++..+.++|+|||.++.
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 134 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV 134 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence 789999997653333221 0 116889999999999999983
No 224
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.29 E-value=8.4e-13 Score=118.28 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=70.0
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEE-Ecceeec---cCC
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVL-KGKIEEI---ELP 186 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~-~~d~~~~---~~~ 186 (379)
+++.......++.+|||||||+|.++..+++.|+.+|+|+|+|+ |++.|+++..+ +... ..++..+ .++
T Consensus 27 ~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~------~~~~~~~~~~~~~~~~~~ 100 (232)
T 3opn_A 27 KALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDER------VVVMEQFNFRNAVLADFE 100 (232)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTT------EEEECSCCGGGCCGGGCC
T ss_pred HHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCcc------ccccccceEEEeCHhHcC
Confidence 33444333456789999999999999999999878999999999 99987764322 2221 1122111 122
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+|.+.++.+... +..++.++.++|||||.++.
T Consensus 101 ~~~~d~~~~D~v~~~------l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 101 QGRPSFTSIDVSFIS------LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp SCCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEE
T ss_pred cCCCCEEEEEEEhhh------HHHHHHHHHHhccCCCEEEE
Confidence 123566665543211 26789999999999999985
No 225
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.28 E-value=2.3e-11 Score=118.94 Aligned_cols=113 Identities=21% Similarity=0.122 Sum_probs=87.5
Q ss_pred HHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-
Q 016992 106 RTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI- 183 (379)
Q Consensus 106 r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~- 183 (379)
.++.+.+.+.......++.+|||+|||+|.+++.+++. ..+|+|+|+|+ +++.|++++..+++. +++++++|+.+.
T Consensus 270 ~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l 347 (433)
T 1uwv_A 270 VNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDV 347 (433)
T ss_dssp HHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCC
T ss_pred HHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHh
Confidence 35555555655555667889999999999999999998 46999999999 999999999999985 799999999873
Q ss_pred ---cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 184 ---ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 184 ---~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++++++||+|+++++-.++ ..++..+.+ ++|++.++.
T Consensus 348 ~~~~~~~~~fD~Vv~dPPr~g~------~~~~~~l~~-~~p~~ivyv 387 (433)
T 1uwv_A 348 TKQPWAKNGFDKVLLDPARAGA------AGVMQQIIK-LEPIRIVYV 387 (433)
T ss_dssp SSSGGGTTCCSEEEECCCTTCC------HHHHHHHHH-HCCSEEEEE
T ss_pred hhhhhhcCCCCEEEECCCCccH------HHHHHHHHh-cCCCeEEEE
Confidence 2334689999999763332 134444433 688887763
No 226
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.28 E-value=1.2e-11 Score=118.95 Aligned_cols=116 Identities=13% Similarity=0.144 Sum_probs=92.3
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCC---------------------------------------CEEE
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA---------------------------------------AHVY 149 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~---------------------------------------~~v~ 149 (379)
.+..++.......++..|||+|||+|.+++.+|..+. .+|+
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 4555566666777889999999999999999988532 3799
Q ss_pred EEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCC--hhhHHHHHHHHHhcccC--CEE
Q 016992 150 AVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLF--ENMLNTVLYARDKWLVD--DGI 224 (379)
Q Consensus 150 ~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~--~~~~~~~l~~~~~~Lkp--gG~ 224 (379)
|+|+++ +++.|++++..+|+.+.|++.++|+.+++.+ .+||+|+++++ |+... ...+..+...+.+.||+ ||.
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPP-yg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPP-YGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCC-CcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 999999 9999999999999987899999999998766 68999999975 44322 24556677777777776 665
Q ss_pred EE
Q 016992 225 VL 226 (379)
Q Consensus 225 li 226 (379)
++
T Consensus 340 ~~ 341 (385)
T 3ldu_A 340 YY 341 (385)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 227
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.28 E-value=1e-11 Score=108.22 Aligned_cols=97 Identities=18% Similarity=0.213 Sum_probs=72.7
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc-C--CCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeecc------------
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA-G--AAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE------------ 184 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~-g--~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------------ 184 (379)
..++.+|||+|||+|.++..+++. + ..+|+|+|++++. .. .+++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 467889999999999999999984 4 4699999999821 12 35899999998765
Q ss_pred -------------CCCCceeEEEEecCccccCC-hhh-------HHHHHHHHHhcccCCEEEEe
Q 016992 185 -------------LPVTKVDIIISEWMGYFLLF-ENM-------LNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -------------~~~~~~D~Iv~~~~~~~l~~-~~~-------~~~~l~~~~~~LkpgG~lip 227 (379)
++.++||+|+++...+.... ..+ ...++..+.++|||||.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 45578999999764332110 011 12478889999999999984
No 228
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.28 E-value=9.9e-12 Score=113.52 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=76.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
.++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.|+++. .++.++.+|+.++++++++||+|++...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 57789999999999999999995 345999999999 999998764 3478999999988877789999998542
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+.++.++|||||.++.
T Consensus 158 ----------~~~l~~~~~~L~pgG~l~~ 176 (269)
T 1p91_A 158 ----------PCKAEELARVVKPGGWVIT 176 (269)
T ss_dssp ----------CCCHHHHHHHEEEEEEEEE
T ss_pred ----------hhhHHHHHHhcCCCcEEEE
Confidence 1246788899999999884
No 229
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.27 E-value=1.4e-11 Score=118.64 Aligned_cols=116 Identities=13% Similarity=0.158 Sum_probs=91.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCC---------------------------------------CEEE
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA---------------------------------------AHVY 149 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~---------------------------------------~~v~ 149 (379)
.+..++.......++..|||++||+|.+++.+|..+. .+|+
T Consensus 188 ~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 4455566666677889999999999999999987432 3599
Q ss_pred EEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccccCC--hhhHHHHHHHHHhcccC--CEE
Q 016992 150 AVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFLLF--ENMLNTVLYARDKWLVD--DGI 224 (379)
Q Consensus 150 ~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~--~~~~~~~l~~~~~~Lkp--gG~ 224 (379)
|+|+++ |++.|++++..+|+.++|+++++|+.+++.+ .+||+|+++++ |+... ...+..+...+.+.||+ ||.
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPP-Yg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPP-YGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCC-CCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCC-CccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 999999 9999999999999988899999999998776 68999999975 44322 23455666666666665 776
Q ss_pred EE
Q 016992 225 VL 226 (379)
Q Consensus 225 li 226 (379)
++
T Consensus 346 ~~ 347 (393)
T 3k0b_A 346 VY 347 (393)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 230
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.27 E-value=1.3e-11 Score=114.83 Aligned_cols=81 Identities=21% Similarity=0.315 Sum_probs=65.8
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
+.......++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.|++++..+++ ++++++++|+.++++ .+||+
T Consensus 34 i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~--~~~D~ 109 (299)
T 2h1r_A 34 IIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF--PKFDV 109 (299)
T ss_dssp HHHHHCCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--CCCSE
T ss_pred HHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--ccCCE
Confidence 4444456788999999999999999999875 5999999999 99999999988887 569999999988765 48999
Q ss_pred EEEecC
Q 016992 193 IISEWM 198 (379)
Q Consensus 193 Iv~~~~ 198 (379)
|+++++
T Consensus 110 Vv~n~p 115 (299)
T 2h1r_A 110 CTANIP 115 (299)
T ss_dssp EEEECC
T ss_pred EEEcCC
Confidence 999865
No 231
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.27 E-value=4.4e-11 Score=116.42 Aligned_cols=108 Identities=19% Similarity=0.211 Sum_probs=84.0
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC
Q 016992 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (379)
Q Consensus 107 ~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (379)
.+.+.+.+.. ..++.+|||+|||+|.+++.+|+.+ .+|+|+|+++ +++.|++++..+++. ++++++|+.++..
T Consensus 278 ~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~~-~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~ 351 (425)
T 2jjq_A 278 AVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKRG-FNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSV 351 (425)
T ss_dssp HHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCC
T ss_pred HHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCc
Confidence 3344444443 4678899999999999999999974 5999999999 999999999999984 9999999988743
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.+||+|+++++-.++ ...++..+. .|+|||.++.+
T Consensus 352 --~~fD~Vv~dPPr~g~-----~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 352 --KGFDTVIVDPPRAGL-----HPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp --TTCSEEEECCCTTCS-----CHHHHHHHH-HHCCSEEEEEE
T ss_pred --cCCCEEEEcCCccch-----HHHHHHHHH-hcCCCcEEEEE
Confidence 389999998753222 234555554 48999998854
No 232
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.27 E-value=7.9e-12 Score=108.56 Aligned_cols=97 Identities=18% Similarity=0.262 Sum_probs=72.5
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCC-----------
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELP----------- 186 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~----------- 186 (379)
....++.+|||||||+|.++..+++. ..+|+|||++++ ..+ .+++++++|+.+....
T Consensus 21 ~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~----------~~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 21 RVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEM----------EEI-AGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp CCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCC----------CCC-TTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEecccc----------ccC-CCeEEEEccccCHHHHHHHHHHhhccc
Confidence 34568899999999999999999998 459999999982 112 3589999999875421
Q ss_pred CCceeEEEEecCccccCC--------hhhHHHHHHHHHhcccCCEEEE
Q 016992 187 VTKVDIIISEWMGYFLLF--------ENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~--------~~~~~~~l~~~~~~LkpgG~li 226 (379)
.++||+|++++....... ......++..+.++|||||.|+
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 148999999864322111 1123567888899999999998
No 233
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.27 E-value=2.5e-11 Score=116.45 Aligned_cols=117 Identities=15% Similarity=0.207 Sum_probs=93.5
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCC---------------------------------------CEE
Q 016992 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGA---------------------------------------AHV 148 (379)
Q Consensus 108 ~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~---------------------------------------~~v 148 (379)
+.+..++.......++..|||.+||+|.+++.+|..+. .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 34555566666677889999999999999999987432 359
Q ss_pred EEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCcccc--CChhhHHHHHHHHHhcccC--CE
Q 016992 149 YAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYFL--LFENMLNTVLYARDKWLVD--DG 223 (379)
Q Consensus 149 ~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~l--~~~~~~~~~l~~~~~~Lkp--gG 223 (379)
+|+|+++ |++.|++++..+|+.+.|+++++|+.+++.+ .+||+|+++++ |+. .....+..+...+.+.||+ ||
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPP-YG~rl~~~~~l~~ly~~lg~~lk~~~g~ 337 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPP-YGERLLDDKAVDILYNEMGETFAPLKTW 337 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCC-CTTTTSCHHHHHHHHHHHHHHHTTCTTS
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCc-hhhccCCHHHHHHHHHHHHHHHhhCCCc
Confidence 9999999 9999999999999988899999999998776 68999999975 443 2335667777777777776 76
Q ss_pred EEE
Q 016992 224 IVL 226 (379)
Q Consensus 224 ~li 226 (379)
.++
T Consensus 338 ~~~ 340 (384)
T 3ldg_A 338 SQF 340 (384)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 234
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.26 E-value=8.1e-12 Score=119.84 Aligned_cols=100 Identities=12% Similarity=-0.029 Sum_probs=83.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCc-EEEEEcceeeccC--CCCceeEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNV-ITVLKGKIEEIEL--PVTKVDIII 194 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~-i~~~~~d~~~~~~--~~~~~D~Iv 194 (379)
.+|.+|||++||+|.+++.++.. |+++|+++|+++ +++.+++|++.|++.++ ++++++|+.++.. ..++||+|+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~ 130 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVD 130 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEE
Confidence 46789999999999999999984 567999999999 99999999999999776 9999999977532 136899999
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+++. + ....++..+.+.|+|||.++.
T Consensus 131 lDP~--g-----~~~~~l~~a~~~Lk~gGll~~ 156 (392)
T 3axs_A 131 LDPF--G-----TPVPFIESVALSMKRGGILSL 156 (392)
T ss_dssp ECCS--S-----CCHHHHHHHHHHEEEEEEEEE
T ss_pred ECCC--c-----CHHHHHHHHHHHhCCCCEEEE
Confidence 9873 1 224577888889999997763
No 235
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.25 E-value=1.3e-11 Score=117.41 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCC------CchHHHHHHH-c-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC-----
Q 016992 121 FKDKVVLDVGAG------TGILSLFCAK-A-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG------~G~~~~~la~-~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~----- 186 (379)
.++.+||||||| +|..++.+++ . +..+|+|||+|+ |.. ...+|+++++|+.++++.
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~----------~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV----------DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG----------CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh----------cCCCcEEEEecccccchhhhhhc
Confidence 456899999999 7766776665 3 557999999999 831 125799999999987654
Q ss_pred -CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 187 -VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 187 -~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++||+|+++.. .+..+....+.++.++|||||+++..
T Consensus 285 ~d~sFDlVisdgs----H~~~d~~~aL~el~rvLKPGGvlVi~ 323 (419)
T 3sso_A 285 RYGPFDIVIDDGS----HINAHVRTSFAALFPHVRPGGLYVIE 323 (419)
T ss_dssp HHCCEEEEEECSC----CCHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccCCccEEEECCc----ccchhHHHHHHHHHHhcCCCeEEEEE
Confidence 589999998642 23367789999999999999999853
No 236
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.25 E-value=5.2e-12 Score=127.81 Aligned_cols=101 Identities=24% Similarity=0.253 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec--cCCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI--ELPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~Iv~~~ 197 (379)
.++.+|||||||+|.++..+|+.|+ .|+|||.++ +++.|+..+...|.. +|++.+++++++ ..++++||+|+|--
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEECc
Confidence 3567999999999999999999987 999999999 999999999888753 599999999988 34557999999955
Q ss_pred CccccCChhhHHHH--HHHHHhcccCCEEEE
Q 016992 198 MGYFLLFENMLNTV--LYARDKWLVDDGIVL 226 (379)
Q Consensus 198 ~~~~l~~~~~~~~~--l~~~~~~LkpgG~li 226 (379)
+.+++ .++..+ +..+.+.|+++|..+
T Consensus 143 ~~ehv---~~~~~~~~~~~~~~tl~~~~~~~ 170 (569)
T 4azs_A 143 VFHHI---VHLHGIDEVKRLLSRLADVTQAV 170 (569)
T ss_dssp CHHHH---HHHHCHHHHHHHHHHHHHHSSEE
T ss_pred chhcC---CCHHHHHHHHHHHHHhcccccee
Confidence 53433 443322 234555677766543
No 237
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=106.20 Aligned_cols=97 Identities=25% Similarity=0.256 Sum_probs=72.2
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHc-CC---------CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEE-Ecceeecc--
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKA-GA---------AHVYAVECSQ-MANMAKQIVEANGFSNVITVL-KGKIEEIE-- 184 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~-g~---------~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~-~~d~~~~~-- 184 (379)
.+.++.+|||+|||+|.++..+++. |. .+|+|+|+++ + .+ .+++++ ++|+....
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHH
Confidence 3567899999999999999999985 64 6999999998 3 12 347888 88876643
Q ss_pred ------CCCCceeEEEEecCccccCCh-hhH-------HHHHHHHHhcccCCEEEEe
Q 016992 185 ------LPVTKVDIIISEWMGYFLLFE-NML-------NTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ------~~~~~~D~Iv~~~~~~~l~~~-~~~-------~~~l~~~~~~LkpgG~lip 227 (379)
+++++||+|+++...+...+. .+. ..++.++.++|||||.++.
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLC 143 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 233689999997533322111 111 4788899999999999984
No 238
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.23 E-value=2.1e-12 Score=118.61 Aligned_cols=107 Identities=17% Similarity=0.166 Sum_probs=74.6
Q ss_pred hccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHH-HHcCCCCcEEEE--EcceeeccCCCCceeE
Q 016992 116 QNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIV-EANGFSNVITVL--KGKIEEIELPVTKVDI 192 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~-~~~~~~~~i~~~--~~d~~~~~~~~~~~D~ 192 (379)
+.....++.+|||||||+|.++..+++. ++|+|||+++|+..+++.. .......++.++ ++|+.+++ +++||+
T Consensus 76 ~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 76 ERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp HTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred HcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCE
Confidence 3344568899999999999999999988 5999999998423222110 001111268899 99998875 478999
Q ss_pred EEEecCccccCChh-h-H--HHHHHHHHhcccCCE--EEEe
Q 016992 193 IISEWMGYFLLFEN-M-L--NTVLYARDKWLVDDG--IVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~-~-~--~~~l~~~~~~LkpgG--~lip 227 (379)
|+|+.. +...+.. + . ..++..+.++||||| .++.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 999865 3322211 1 1 137888999999999 8874
No 239
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.22 E-value=2.6e-11 Score=116.16 Aligned_cols=111 Identities=16% Similarity=0.082 Sum_probs=81.5
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--
Q 016992 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-- 184 (379)
Q Consensus 108 ~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-- 184 (379)
+.+...+...... .+.+|||+|||+|.+++.+|+. +.+|+|+|+++ +++.|+++++.+++ ++++++++|+.++.
T Consensus 200 ~~l~~~~~~~~~~-~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~-~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 200 IQMLEWALDVTKG-SKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHI-DNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHHTTT-CCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTC-CSEEEECCCSHHHHHH
T ss_pred HHHHHHHHHHhhc-CCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECCHHHHHHH
Confidence 3444444443332 3678999999999999999885 56999999999 99999999999999 47999999998752
Q ss_pred CCC--------------CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 185 LPV--------------TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 185 ~~~--------------~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
+.. .+||+|+.+++..++ . ..+.+.|+++|.+++.+|
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~-----~----~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPRSGL-----D----SETEKMVQAYPRILYISC 327 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC-----C----HHHHHHHTTSSEEEEEES
T ss_pred HhhccccccccccccccCCCCEEEECcCcccc-----H----HHHHHHHhCCCEEEEEEC
Confidence 111 279999999763322 1 223455668888875433
No 240
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.22 E-value=5.4e-11 Score=105.34 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||||||+|.+++.+. +..+|+|+|+++ +++.+++++..++. ...+..+|....+++ +++|+|++..+.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~-~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPA-EAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCC-CBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCC-CCcchHHHHHHH
Confidence 567799999999999999887 677999999999 99999999999885 488999999888777 799999987655
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
++|.+... ...+ ++...|+++|++|
T Consensus 179 h~LE~q~~-~~~~-~ll~aL~~~~vvV 203 (253)
T 3frh_A 179 PLLEREQA-GSAM-ALLQSLNTPRMAV 203 (253)
T ss_dssp HHHHHHST-THHH-HHHHHCBCSEEEE
T ss_pred HHhhhhch-hhHH-HHHHHhcCCCEEE
Confidence 55533222 2333 6667899999988
No 241
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.21 E-value=3.2e-11 Score=109.61 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=84.3
Q ss_pred HHHHHHHHHhccCC-CCCCEEEEEcCCC---chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce
Q 016992 107 TKSYQNVIYQNKFL-FKDKVVLDVGAGT---GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI 180 (379)
Q Consensus 107 ~~~~~~~i~~~~~~-~~~~~VLDlGcG~---G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~ 180 (379)
+..|.......+.. .....|||||||+ |.+...+.+ .+..+|++||.|+ |+..|++++...+. .+++++++|+
T Consensus 62 nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~ 140 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADM 140 (277)
T ss_dssp HHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCT
T ss_pred HHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecc
Confidence 44555544433332 2346899999997 344443443 4557999999999 99999998865432 4799999999
Q ss_pred eeccC----C--CCcee-----EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 181 EEIEL----P--VTKVD-----IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 181 ~~~~~----~--~~~~D-----~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.++.. + ...|| .|+++.+.+++.....+..++..+.+.|+|||+|+.+
T Consensus 141 ~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 141 LDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp TCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred cChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 88521 0 13344 4677766676755444788999999999999999854
No 242
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.21 E-value=1.7e-12 Score=118.55 Aligned_cols=105 Identities=18% Similarity=0.220 Sum_probs=73.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHH-HHcCCCCcEEEE--EcceeeccCCCCceeEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIV-EANGFSNVITVL--KGKIEEIELPVTKVDIII 194 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~-~~~~~~~~i~~~--~~d~~~~~~~~~~~D~Iv 194 (379)
....++.+|||||||+|.++..+++. .+|+|||+++|+..+++.. .......++.++ ++|+.+++ +++||+|+
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~ 145 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIM 145 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEE
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEE
Confidence 44568899999999999999999988 5999999998422222110 000111158889 89998875 47899999
Q ss_pred EecCccccCChh-h-H--HHHHHHHHhcccCCE--EEEe
Q 016992 195 SEWMGYFLLFEN-M-L--NTVLYARDKWLVDDG--IVLP 227 (379)
Q Consensus 195 ~~~~~~~l~~~~-~-~--~~~l~~~~~~LkpgG--~lip 227 (379)
|+.. +...+.. + . ..++..+.++||||| .|+.
T Consensus 146 sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 146 CDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 9865 3322211 1 1 137888999999999 8874
No 243
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.20 E-value=2.2e-11 Score=115.76 Aligned_cols=109 Identities=16% Similarity=0.176 Sum_probs=80.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
.+.......++.+|||||||+|.++..+++. +..+++++|+++++. ++++...++.++|+++.+|+. .+++ +||
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D 249 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HAD 249 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCS
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhh--cccccccCCCCCeEEEecCCC-CCCC--CCc
Confidence 3444455667889999999999999999884 456899999976444 333444456678999999996 3344 899
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|++..+.+.+. ......+++++.+.|||||+++.
T Consensus 250 ~v~~~~vlh~~~-d~~~~~~L~~~~~~LkpgG~l~i 284 (348)
T 3lst_A 250 VHVLKRILHNWG-DEDSVRILTNCRRVMPAHGRVLV 284 (348)
T ss_dssp EEEEESCGGGSC-HHHHHHHHHHHHHTCCTTCEEEE
T ss_pred EEEEehhccCCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 999876533331 22336999999999999999984
No 244
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.19 E-value=2.6e-11 Score=108.41 Aligned_cols=112 Identities=9% Similarity=0.036 Sum_probs=86.0
Q ss_pred HHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC
Q 016992 108 KSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (379)
Q Consensus 108 ~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (379)
+.|...+.... .+..+|||||||+|.+++.++.. +..+|+|+|+++ |++.+++++..+|+. .++...|...-++
T Consensus 120 D~fY~~i~~~i--~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p 195 (281)
T 3lcv_B 120 DEFYRELFRHL--PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRL 195 (281)
T ss_dssp HHHHHHHGGGS--CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCC
T ss_pred HHHHHHHHhcc--CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCC
Confidence 34445555433 44679999999999999999885 778999999999 999999999999985 7888888776665
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
+ +.+|++++..+..+|..+.. ...+ .+...|+++|++|
T Consensus 196 ~-~~~DvaL~lkti~~Le~q~k-g~g~-~ll~aL~~~~vvV 233 (281)
T 3lcv_B 196 D-EPADVTLLLKTLPCLETQQR-GSGW-EVIDIVNSPNIVV 233 (281)
T ss_dssp C-SCCSEEEETTCHHHHHHHST-THHH-HHHHHSSCSEEEE
T ss_pred C-CCcchHHHHHHHHHhhhhhh-HHHH-HHHHHhCCCCEEE
Confidence 5 88999998655444422111 1334 6778899999998
No 245
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.19 E-value=4.2e-11 Score=113.48 Aligned_cols=116 Identities=20% Similarity=0.055 Sum_probs=94.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCC-----CcEEEEEcceeecc-CCCCc
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFS-----NVITVLKGKIEEIE-LPVTK 189 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~-----~~i~~~~~d~~~~~-~~~~~ 189 (379)
+...+|.+|||+|||+|+.+.+++..+. +.|+++|+++ .+..+++++++.+.. .++.+...|...+. ...+.
T Consensus 144 L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~ 223 (359)
T 4fzv_A 144 LGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDT 223 (359)
T ss_dssp HCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTC
T ss_pred hCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhcccc
Confidence 5678999999999999999999999643 5899999999 999999999987653 46899999988764 23478
Q ss_pred eeEEEEecCcccc----CC-hh----------------hHHHHHHHHHhcccCCEEEEecCCceE
Q 016992 190 VDIIISEWMGYFL----LF-EN----------------MLNTVLYARDKWLVDDGIVLPDKASLY 233 (379)
Q Consensus 190 ~D~Iv~~~~~~~l----~~-~~----------------~~~~~l~~~~~~LkpgG~lip~~~~~~ 233 (379)
||.|+++.+|++- .. .. .-..+|....++|||||+|++++|++.
T Consensus 224 fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 224 YDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp EEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred CCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 9999999988762 00 00 114778888999999999999999963
No 246
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.19 E-value=2.2e-11 Score=116.66 Aligned_cols=98 Identities=21% Similarity=0.156 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc---------------CCCCcEEEEEcceeecc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN---------------GFSNVITVLKGKIEEIE 184 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~---------------~~~~~i~~~~~d~~~~~ 184 (379)
++.+|||+|||+|.+++.+++. |..+|+++|+++ +++.++++++.+ ++.+ ++++++|+.++.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~~~ 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANRLM 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHHHH
Confidence 6789999999999999999985 767899999999 999999999999 8854 999999998763
Q ss_pred CC-CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LP-VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~-~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.. .++||+|+.++++. ...+++.+.+.|++||.++.
T Consensus 126 ~~~~~~fD~I~lDP~~~-------~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 126 AERHRYFHFIDLDPFGS-------PMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp HHSTTCEEEEEECCSSC-------CHHHHHHHHHHEEEEEEEEE
T ss_pred HhccCCCCEEEeCCCCC-------HHHHHHHHHHhcCCCCEEEE
Confidence 21 25799999887422 24678888899999997763
No 247
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=7.4e-12 Score=116.67 Aligned_cols=103 Identities=17% Similarity=0.256 Sum_probs=72.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEec----HH-HHHHHHHHHHHcCCCCcEEEEEc-ceeeccCCCCcee
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVEC----SQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELPVTKVD 191 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~----s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D 191 (379)
....++.+|||||||+|.++..+++. ++|+|||+ ++ +++.+. .+..+. ++|.++++ |+..++ .++||
T Consensus 78 ~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~l~--~~~fD 150 (305)
T 2p41_A 78 NLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFFIP--PERCD 150 (305)
T ss_dssp TSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEeccccccCC--cCCCC
Confidence 34567899999999999999999988 48999999 45 442211 111122 46999999 887764 36899
Q ss_pred EEEEecCccccCChhhH---HHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENML---NTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~---~~~l~~~~~~LkpgG~lip 227 (379)
+|+|++.........+. ..++..+.++|||||.|+.
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 99998654311111111 1478888899999998874
No 248
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.17 E-value=6.9e-12 Score=114.36 Aligned_cols=95 Identities=17% Similarity=0.030 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH--cCC-CCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA--NGF-SNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~--~~~-~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
..+++|||||||+|.++..+++.+ .+|++||+++ +++.|++++.. .++ ..+++++.+|+.+.. ++||+|+++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 356799999999999999988886 8999999999 99999887532 112 257999999998764 789999987
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.. ++..++..+.+.|+|||+++.
T Consensus 147 ~~--------dp~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 147 QE--------PDIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp SC--------CCHHHHHHHHTTEEEEEEEEE
T ss_pred CC--------ChHHHHHHHHHhcCCCcEEEE
Confidence 42 123488999999999999984
No 249
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.17 E-value=4.9e-11 Score=112.26 Aligned_cols=121 Identities=20% Similarity=0.151 Sum_probs=85.2
Q ss_pred HHHHHHHhccC-CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC---CC----CcEEEEEcc
Q 016992 109 SYQNVIYQNKF-LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG---FS----NVITVLKGK 179 (379)
Q Consensus 109 ~~~~~i~~~~~-~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~---~~----~~i~~~~~d 179 (379)
.|.+.|..... ...+++||+||||+|.++..+++.+..+|++||+++ +++.|++++...+ +. ++++++.+|
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~D 253 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 253 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECc
Confidence 34444543221 135689999999999999999998778999999999 9999999875321 22 269999999
Q ss_pred eeeccC----CCCceeEEEEecCc-c-c-----cCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 180 IEEIEL----PVTKVDIIISEWMG-Y-F-----LLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 180 ~~~~~~----~~~~~D~Iv~~~~~-~-~-----l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+.++.. ..++||+|++++.. . . +........++..+.+.|+|||+++...
T Consensus 254 a~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 254 CIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 987642 24789999998743 1 1 1112223344444489999999998543
No 250
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.14 E-value=1.5e-10 Score=109.73 Aligned_cols=105 Identities=17% Similarity=0.121 Sum_probs=81.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcC-C-----CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAG-A-----AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g-~-----~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
..++.+|||+|||+|.++..+++.. . .+|+|+|+++ +++.|+.++...|+ ++.++++|+..... .++||+
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~-~~~fD~ 204 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLL-VDPVDV 204 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCC-CCCEEE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccc-cCCccE
Confidence 3467899999999999999988742 1 5899999999 99999999988887 48899999876433 478999
Q ss_pred EEEecCccccCChh--------------hH-HHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFEN--------------ML-NTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~--------------~~-~~~l~~~~~~LkpgG~lip 227 (379)
|+++++........ .. ..++..+.+.|+|||++++
T Consensus 205 Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~ 254 (344)
T 2f8l_A 205 VISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFF 254 (344)
T ss_dssp EEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEE
T ss_pred EEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEE
Confidence 99997632221110 11 2578888999999998873
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.14 E-value=1.4e-10 Score=107.26 Aligned_cols=84 Identities=27% Similarity=0.407 Sum_probs=71.2
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 111 ~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
.+.|.......++.+|||||||+|.++..+++.+ .+|+|||+++ +++.+++++... ++++++++|+.+++++...
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-~~V~aVEid~~li~~a~~~~~~~---~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-KKVYVIEIDKSLEPYANKLKELY---NNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCGGGHHHHHHHHHHC---SSEEEEESCTTTSCGGGSC
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHhccC---CCeEEEECchhhCCcccCC
Confidence 3445555667788999999999999999999984 5999999999 999999998742 4699999999998877667
Q ss_pred eeEEEEecC
Q 016992 190 VDIIISEWM 198 (379)
Q Consensus 190 ~D~Iv~~~~ 198 (379)
||+|+++++
T Consensus 115 fD~Iv~NlP 123 (295)
T 3gru_A 115 FNKVVANLP 123 (295)
T ss_dssp CSEEEEECC
T ss_pred ccEEEEeCc
Confidence 999999854
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.13 E-value=2.6e-10 Score=102.84 Aligned_cols=84 Identities=18% Similarity=0.268 Sum_probs=67.5
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV- 187 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~- 187 (379)
+.+.+.......++.+|||||||+|.++..+++.+ .+|+|+|+++ +++.+++++... ++++++++|+.+++++.
T Consensus 18 ~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~~ 93 (244)
T 1qam_A 18 NIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPKN 93 (244)
T ss_dssp HHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCSS
T ss_pred HHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcccC
Confidence 33445555666788999999999999999999986 5999999999 999999887532 46999999999988763
Q ss_pred CceeEEEEecC
Q 016992 188 TKVDIIISEWM 198 (379)
Q Consensus 188 ~~~D~Iv~~~~ 198 (379)
..| .|+++++
T Consensus 94 ~~~-~vv~nlP 103 (244)
T 1qam_A 94 QSY-KIFGNIP 103 (244)
T ss_dssp CCC-EEEEECC
T ss_pred CCe-EEEEeCC
Confidence 345 5777753
No 253
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.13 E-value=6.3e-11 Score=104.36 Aligned_cols=86 Identities=16% Similarity=0.130 Sum_probs=71.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
..++.+|||||||+|.++..++ .+|+|+|+++. ++.++++|+.++++++++||+|++..+.
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l 125 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL 125 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC
T ss_pred cCCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc
Confidence 3577899999999999988772 59999999872 3678999999988777899999986542
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+ ..++..++.++.++|+|||.++..
T Consensus 126 ---~-~~~~~~~l~~~~~~L~~gG~l~i~ 150 (215)
T 2zfu_A 126 ---M-GTNIRDFLEEANRVLKPGGLLKVA 150 (215)
T ss_dssp ---C-SSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---c-ccCHHHHHHHHHHhCCCCeEEEEE
Confidence 2 367789999999999999999853
No 254
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.11 E-value=2.5e-10 Score=109.22 Aligned_cols=97 Identities=19% Similarity=0.224 Sum_probs=76.6
Q ss_pred CCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..++.+|||||||+|.++..+++ .+..+++++|+ + +++.|++. .+|+++.+|+.+ +++. . |+|++..
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~p~-~-D~v~~~~ 269 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GVPK-G-DAIFIKW 269 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC-C-SEEEEES
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CCCC-C-CEEEEec
Confidence 55678999999999999999988 45569999999 7 88877642 469999999987 5653 3 9999876
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.+.+ .......+++++++.|||||+++..
T Consensus 270 vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i~ 299 (368)
T 3reo_A 270 ICHDW-SDEHCLKLLKNCYAALPDHGKVIVA 299 (368)
T ss_dssp CGGGB-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred hhhcC-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 54333 2344568999999999999998843
No 255
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.10 E-value=2.4e-10 Score=109.50 Aligned_cols=102 Identities=16% Similarity=0.073 Sum_probs=78.9
Q ss_pred HHHhccC-CCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 113 VIYQNKF-LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 113 ~i~~~~~-~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
.+..... ..++.+|||||||+|.++..+++. +..+++++|+ + +++.|++ . .+|+++.+|+.+ +++ .
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~~-~- 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA-SVP-Q- 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CCC-C-
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc-CCC-C-
Confidence 3443333 456789999999999999999985 4568999999 7 9888764 2 359999999987 565 3
Q ss_pred eeEEEEecCccccCChhhHH--HHHHHHHhcccCCEEEEec
Q 016992 190 VDIIISEWMGYFLLFENMLN--TVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~--~~l~~~~~~LkpgG~lip~ 228 (379)
||+|++..+.+. ..+.. .+++++.+.|||||+++..
T Consensus 268 ~D~v~~~~~lh~---~~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 268 GDAMILKAVCHN---WSDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp EEEEEEESSGGG---SCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEEeccccc---CCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 999998765333 34444 9999999999999998843
No 256
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.10 E-value=2.1e-10 Score=111.62 Aligned_cols=102 Identities=15% Similarity=0.072 Sum_probs=76.9
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCce
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKV 190 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 190 (379)
+.......++.+|||+|||+|.++..+++. +..+|+|+|+++ +++.| .+++++++|+.+.... ++|
T Consensus 31 ~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~~-~~f 99 (421)
T 2ih2_A 31 MVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEPG-EAF 99 (421)
T ss_dssp HHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCCS-SCE
T ss_pred HHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCcc-CCC
Confidence 333333345679999999999999999984 456999999999 88777 3589999999887543 789
Q ss_pred eEEEEecCccccCCh---------hh------------------HHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFE---------NM------------------LNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~---------~~------------------~~~~l~~~~~~LkpgG~lip 227 (379)
|+|+++++ ++.... .. ...++..+.++|+|||.++.
T Consensus 100 D~Ii~NPP-y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 100 DLILGNPP-YGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp EEEEECCC-CCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CEEEECcC-ccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 99999875 332211 11 12568888999999999873
No 257
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.09 E-value=3.8e-10 Score=107.84 Aligned_cols=97 Identities=21% Similarity=0.181 Sum_probs=77.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..++.+|||||||+|.++..+++ .+..+++++|+ + +++.|++. .+|+++.+|+.+ +++. . |+|++..
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~-~~p~-~-D~v~~~~ 267 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFK-EVPS-G-DTILMKW 267 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CCCC-C-SEEEEES
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCC-CCCC-C-CEEEehH
Confidence 56678999999999999999988 45669999999 6 88777642 569999999987 6663 3 9999876
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+.+.+ .......+++++++.|||||+++..
T Consensus 268 vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i~ 297 (364)
T 3p9c_A 268 ILHDW-SDQHCATLLKNCYDALPAHGKVVLV 297 (364)
T ss_dssp CGGGS-CHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred HhccC-CHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 53332 2345678999999999999998843
No 258
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.08 E-value=7.1e-12 Score=113.21 Aligned_cols=107 Identities=19% Similarity=0.255 Sum_probs=80.7
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-Ccee
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TKVD 191 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D 191 (379)
+.......++.+|||+|||+|.++..+++.+ .+|+|+|+++ +++.|++++. + .++++++++|+.+++++. ++|
T Consensus 21 i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~--~-~~~v~~~~~D~~~~~~~~~~~f- 95 (245)
T 1yub_A 21 IIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK--L-NTRVTLIHQDILQFQFPNKQRY- 95 (245)
T ss_dssp HHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT--T-CSEEEECCSCCTTTTCCCSSEE-
T ss_pred HHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc--c-CCceEEEECChhhcCcccCCCc-
Confidence 4444556788899999999999999999986 6999999999 9999988765 2 257999999999987663 678
Q ss_pred EEEEecCccccCChhhHHHHH--------------HHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVL--------------YARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l--------------~~~~~~LkpgG~lip 227 (379)
.|+++++ |... ...+..++ ..+.++|+|||.++.
T Consensus 96 ~vv~n~P-y~~~-~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 96 KIVGNIP-YHLS-TQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp EEEEECC-SSSC-HHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred EEEEeCC-cccc-HHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 7888764 4432 22333333 457788899987653
No 259
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.08 E-value=1.9e-10 Score=112.84 Aligned_cols=114 Identities=16% Similarity=0.045 Sum_probs=87.0
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc--------------CCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEE
Q 016992 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--------------GAAHVYAVECSQ-MANMAKQIVEANGFSN-VIT 174 (379)
Q Consensus 111 ~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--------------g~~~v~~vD~s~-~~~~a~~~~~~~~~~~-~i~ 174 (379)
.+.+.+.....++.+|||+|||+|.++..+++. ....++|+|+++ +++.|+.++...|+.. ++.
T Consensus 160 ~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~ 239 (445)
T 2okc_A 160 IQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSP 239 (445)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCS
T ss_pred HHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCC
Confidence 344554455667889999999999999988873 235899999999 9999999998888742 578
Q ss_pred EEEcceeeccCCCCceeEEEEecCccccCChh---------------hHHHHHHHHHhcccCCEEEE
Q 016992 175 VLKGKIEEIELPVTKVDIIISEWMGYFLLFEN---------------MLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 175 ~~~~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~---------------~~~~~l~~~~~~LkpgG~li 226 (379)
++++|+...+.. .+||+|+++++ ++..... ....++..+.++|||||++.
T Consensus 240 i~~gD~l~~~~~-~~fD~Iv~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a 304 (445)
T 2okc_A 240 IVCEDSLEKEPS-TLVDVILANPP-FGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAA 304 (445)
T ss_dssp EEECCTTTSCCS-SCEEEEEECCC-SSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred EeeCCCCCCccc-CCcCEEEECCC-CCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEE
Confidence 899998776554 58999999975 3221111 11367888889999999886
No 260
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.07 E-value=4.4e-10 Score=102.62 Aligned_cols=95 Identities=17% Similarity=0.237 Sum_probs=73.5
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-Cc
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-TK 189 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~ 189 (379)
+.|.......++ +|||||||+|.++..+++.+ .+|+|+|+++ |++.+++++.. .+++++++|+.+++++. ..
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGGSCT
T ss_pred HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhhccC
Confidence 334444556778 99999999999999999986 5999999999 99999988752 56999999999987653 26
Q ss_pred eeEEEEecCccccCChhhHHHHHHH
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYA 214 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~ 214 (379)
+|.|+++++ |.+. .+.+..++..
T Consensus 111 ~~~iv~NlP-y~is-s~il~~ll~~ 133 (271)
T 3fut_A 111 GSLLVANLP-YHIA-TPLVTRLLKT 133 (271)
T ss_dssp TEEEEEEEC-SSCC-HHHHHHHHHH
T ss_pred ccEEEecCc-cccc-HHHHHHHhcC
Confidence 899999964 5442 2444455543
No 261
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.05 E-value=3.4e-10 Score=102.57 Aligned_cols=85 Identities=13% Similarity=0.255 Sum_probs=68.6
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC----
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP---- 186 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---- 186 (379)
+.|.......++.+|||||||+|.++..+++.+ .+|+|+|+++ |++.+++++.. .++++++++|+.+++++
T Consensus 19 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~~~~ 94 (255)
T 3tqs_A 19 QKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSSVKT 94 (255)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGGSCC
T ss_pred HHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHHhcc
Confidence 334445566788999999999999999999986 5999999999 99999998865 25699999999988764
Q ss_pred CCceeEEEEecCcccc
Q 016992 187 VTKVDIIISEWMGYFL 202 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l 202 (379)
.++|| |+++++ |.+
T Consensus 95 ~~~~~-vv~NlP-Y~i 108 (255)
T 3tqs_A 95 DKPLR-VVGNLP-YNI 108 (255)
T ss_dssp SSCEE-EEEECC-HHH
T ss_pred CCCeE-EEecCC-ccc
Confidence 24688 777753 443
No 262
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.05 E-value=1e-10 Score=99.81 Aligned_cols=88 Identities=15% Similarity=0.050 Sum_probs=71.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---CCCceeEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDII 193 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~I 193 (379)
....+|.+|||||||. +++|+|+ |++.|+++... +++++++|+.++++ ++++||+|
T Consensus 8 ~g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V 67 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDII 67 (176)
T ss_dssp TTCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEE
T ss_pred cCCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEE
Confidence 3467899999999996 2399999 99999987532 38999999999887 67899999
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++..+.+++ ..++..+++++.++|||||+++.
T Consensus 68 ~~~~~l~~~--~~~~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 68 LSGLVPGST--TLHSAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp EECCSTTCC--CCCCHHHHHHHHHHEEEEEEEEE
T ss_pred EECChhhhc--ccCHHHHHHHHHHHCCCCEEEEE
Confidence 986543332 14568999999999999999986
No 263
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.04 E-value=1.3e-09 Score=103.68 Aligned_cols=111 Identities=16% Similarity=0.106 Sum_probs=84.8
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCcee
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVD 191 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D 191 (379)
.+..........+|||||||+|.++..+++ .+..+++..|..++++.|++++...+ .++|+++.+|+.+.+. ..+|
T Consensus 170 ~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~--~~~D 246 (353)
T 4a6d_A 170 SVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL--PEAD 246 (353)
T ss_dssp HHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC---CCSEEEEESCTTTSCC--CCCS
T ss_pred HHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcc-cCceeeecCccccCCC--CCce
Confidence 344445566778999999999999999998 46678999998449999998876544 4789999999976544 4589
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|++..+.+.. .......+|+++++.|+|||+++.
T Consensus 247 ~~~~~~vlh~~-~d~~~~~iL~~~~~al~pgg~lli 281 (353)
T 4a6d_A 247 LYILARVLHDW-ADGKCSHLLERIYHTCKPGGGILV 281 (353)
T ss_dssp EEEEESSGGGS-CHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred EEEeeeecccC-CHHHHHHHHHHHHhhCCCCCEEEE
Confidence 99976553332 123456889999999999999884
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.02 E-value=1.1e-09 Score=112.92 Aligned_cols=117 Identities=16% Similarity=0.114 Sum_probs=88.9
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcC-------------------------------------------C
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAG-------------------------------------------A 145 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g-------------------------------------------~ 145 (379)
.+..++.......++..|||.+||+|.+++.+|..+ .
T Consensus 177 ~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~ 256 (703)
T 3v97_A 177 TLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYS 256 (703)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCC
Confidence 445556655666788899999999999999888742 1
Q ss_pred CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC--CCceeEEEEecCccccC--ChhhHHHHHHHHH---h
Q 016992 146 AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP--VTKVDIIISEWMGYFLL--FENMLNTVLYARD---K 217 (379)
Q Consensus 146 ~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~--~~~~D~Iv~~~~~~~l~--~~~~~~~~l~~~~---~ 217 (379)
.+|+|+|+++ +++.|++++..+|+.+.|++.++|+.++..+ .++||+|+++++ |+.. ....+..+...+. +
T Consensus 257 ~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPP-YG~Rlg~~~~l~~ly~~l~~~lk 335 (703)
T 3v97_A 257 SHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP-YGERLDSEPALIALHSLLGRIMK 335 (703)
T ss_dssp CCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCC-CCC---CCHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCC-ccccccchhHHHHHHHHHHHHHH
Confidence 4799999999 9999999999999988899999999987543 238999999975 5432 2334555555444 4
Q ss_pred cccCCEEEE
Q 016992 218 WLVDDGIVL 226 (379)
Q Consensus 218 ~LkpgG~li 226 (379)
.+.|||.++
T Consensus 336 ~~~~g~~~~ 344 (703)
T 3v97_A 336 NQFGGWNLS 344 (703)
T ss_dssp HHCTTCEEE
T ss_pred hhCCCCeEE
Confidence 445798865
No 265
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.01 E-value=6.7e-10 Score=102.27 Aligned_cols=105 Identities=13% Similarity=0.065 Sum_probs=74.1
Q ss_pred HHHHHHHHH-hccCCCCCCEEEEEcC------CCchHHHHHHH-cC-CCEEEEEecHHHHHHHHHHHHHcCCCCcEEE-E
Q 016992 107 TKSYQNVIY-QNKFLFKDKVVLDVGA------GTGILSLFCAK-AG-AAHVYAVECSQMANMAKQIVEANGFSNVITV-L 176 (379)
Q Consensus 107 ~~~~~~~i~-~~~~~~~~~~VLDlGc------G~G~~~~~la~-~g-~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~-~ 176 (379)
+..+...+. ......++.+|||||| |+|. ..+++ .+ ..+|+|+|+++. + .++++ +
T Consensus 47 y~~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~------------v-~~v~~~i 111 (290)
T 2xyq_A 47 YTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF------------V-SDADSTL 111 (290)
T ss_dssp HHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC------------B-CSSSEEE
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC------------C-CCCEEEE
Confidence 333444442 2345678999999999 4476 33444 55 469999999984 1 24788 9
Q ss_pred EcceeeccCCCCceeEEEEecCccc--------cCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 177 KGKIEEIELPVTKVDIIISEWMGYF--------LLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 177 ~~d~~~~~~~~~~~D~Iv~~~~~~~--------l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
++|+.+++++ ++||+|++++.... ......+..+++.+.++|||||.|+.
T Consensus 112 ~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 112 IGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp ESCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ECccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 9999988765 78999999753221 11123456899999999999999984
No 266
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.01 E-value=4.8e-10 Score=106.59 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=75.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
..++.+|||||||+|.++..+++. +..+++++|+ + +++.|++ . .+++++.+|+.+ +++ .||+|++..
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~p--~~D~v~~~~ 254 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFT-SIP--NADAVLLKY 254 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTT-CCC--CCSEEEEES
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------C-CCcEEEeccccC-CCC--CccEEEeeh
Confidence 456789999999999999999984 4569999999 8 9988765 1 349999999976 555 399999876
Q ss_pred CccccCChhhHHHHHHHHHhcccC---CEEEEec
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVD---DGIVLPD 228 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~Lkp---gG~lip~ 228 (379)
+.+.+. ......+++++.+.||| ||+++..
T Consensus 255 ~lh~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i~ 287 (352)
T 1fp2_A 255 ILHNWT-DKDCLRILKKCKEAVTNDGKRGKVTII 287 (352)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred hhccCC-HHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 544331 12234999999999999 9998843
No 267
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.97 E-value=6.2e-09 Score=90.41 Aligned_cols=97 Identities=20% Similarity=0.204 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC--CCcEEEEEcceeec---------------
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF--SNVITVLKGKIEEI--------------- 183 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~--~~~i~~~~~d~~~~--------------- 183 (379)
+.++|||+|| |..++.+|+...++|++||.++ ..+.|+++++++|+ .++|+++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4579999998 5788888885357999999999 99999999999998 78999999997543
Q ss_pred c--------C-CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 184 E--------L-PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 184 ~--------~-~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+ . ..++||+|+.+.- .....+..+.++|+|||+++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~--------k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR--------FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS--------SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHHhhhhhccccCCCCCEEEEeCC--------CchhHHHHHHHhcCCCeEEEEe
Confidence 1 1 1368999997641 1124455566899999999853
No 268
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.95 E-value=8.6e-10 Score=102.25 Aligned_cols=78 Identities=18% Similarity=0.265 Sum_probs=66.5
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CC---CCce
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP---VTKV 190 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~---~~~~ 190 (379)
+...++.+|||+|||+|..+..+++. +..+|+|+|.++ |++.|++++..++ ++++++++|+.+++ ++ ..+|
T Consensus 22 L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~ 99 (301)
T 1m6y_A 22 LKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKV 99 (301)
T ss_dssp HCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCE
T ss_pred cCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCC
Confidence 44568899999999999999999985 456999999999 9999999998877 57999999998874 11 1579
Q ss_pred eEEEEec
Q 016992 191 DIIISEW 197 (379)
Q Consensus 191 D~Iv~~~ 197 (379)
|.|++++
T Consensus 100 D~Vl~D~ 106 (301)
T 1m6y_A 100 DGILMDL 106 (301)
T ss_dssp EEEEEEC
T ss_pred CEEEEcC
Confidence 9999886
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.92 E-value=8.1e-10 Score=106.20 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=65.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc--CCCCcEEEEEcceeec-cC-CCCceeEEEEe
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN--GFSNVITVLKGKIEEI-EL-PVTKVDIIISE 196 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~--~~~~~i~~~~~d~~~~-~~-~~~~~D~Iv~~ 196 (379)
+|.+|||+|||+|..++.+++.+. +|++||+++ +++.|+++++.+ |+ ++++++++|+.+. +. +.++||+|+++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 589999999999999999998764 999999999 999999999998 88 6799999999874 21 22589999998
Q ss_pred cC
Q 016992 197 WM 198 (379)
Q Consensus 197 ~~ 198 (379)
++
T Consensus 171 PP 172 (410)
T 3ll7_A 171 PA 172 (410)
T ss_dssp CE
T ss_pred CC
Confidence 75
No 270
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.88 E-value=4e-09 Score=96.72 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=64.1
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCC---EEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAA---HVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV 187 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~---~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~ 187 (379)
+.|.......++.+|||||||+|.++..+++.+.. +|+|+|+++ |++.++++. ..+++++++|+.++++++
T Consensus 32 ~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 32 DAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGS 106 (279)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGG
T ss_pred HHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhH
Confidence 33444455678899999999999999999996442 299999999 999999883 257999999999987652
Q ss_pred C------ceeEEEEecC
Q 016992 188 T------KVDIIISEWM 198 (379)
Q Consensus 188 ~------~~D~Iv~~~~ 198 (379)
- ..+.||++++
T Consensus 107 ~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 107 IARPGDEPSLRIIGNLP 123 (279)
T ss_dssp GSCSSSSCCEEEEEECC
T ss_pred hcccccCCceEEEEccC
Confidence 1 2357888853
No 271
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=5.1e-10 Score=101.64 Aligned_cols=79 Identities=27% Similarity=0.149 Sum_probs=63.3
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-H-------HHHHHHHHHHcCCCCcEEEEEcceeecc--CCC-
Q 016992 119 FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-M-------ANMAKQIVEANGFSNVITVLKGKIEEIE--LPV- 187 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~-------~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~~- 187 (379)
...++.+|||+|||+|.+++.+|+.|. +|+|+|+++ + ++.|+++++.+++.++|+++++|+.++. +++
T Consensus 80 ~~~~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 80 NHTAHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp TGGGCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHH
T ss_pred CcCCcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhcc
Confidence 345678999999999999999999864 999999998 4 4556666666776567999999998752 333
Q ss_pred -CceeEEEEecC
Q 016992 188 -TKVDIIISEWM 198 (379)
Q Consensus 188 -~~~D~Iv~~~~ 198 (379)
++||+|+++++
T Consensus 159 ~~~fD~V~~dP~ 170 (258)
T 2r6z_A 159 QGKPDIVYLDPM 170 (258)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCccEEEECCC
Confidence 58999999875
No 272
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.86 E-value=3.8e-09 Score=100.59 Aligned_cols=96 Identities=16% Similarity=0.217 Sum_probs=74.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.++.+|||||||+|.++..+++. +..+++++|++.+++.|++ . .+|+++.+|+.+ +++ .||+|++..+.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~------~-~~v~~~~~d~~~-~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTG------N-ENLNFVGGDMFK-SIP--SADAVLLKWVL 261 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCC------C-SSEEEEECCTTT-CCC--CCSEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhccc------C-CCcEEEeCccCC-CCC--CceEEEEcccc
Confidence 45689999999999999999985 4568999999338877664 2 349999999987 555 49999987653
Q ss_pred cccCChhhHHHHHHHHHhcccC---CEEEEe
Q 016992 200 YFLLFENMLNTVLYARDKWLVD---DGIVLP 227 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~Lkp---gG~lip 227 (379)
+.+. ......+++++.+.|+| ||+++.
T Consensus 262 h~~~-d~~~~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 262 HDWN-DEQSLKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp GGSC-HHHHHHHHHHHHHHTGGGGGGCEEEE
T ss_pred cCCC-HHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 3331 12244999999999999 999884
No 273
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.86 E-value=3.3e-09 Score=95.76 Aligned_cols=85 Identities=19% Similarity=0.317 Sum_probs=66.8
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC--
Q 016992 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV-- 187 (379)
Q Consensus 111 ~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~-- 187 (379)
.+.|.......++.+|||||||+|.++..+++.|..+|+|+|+++ +++.++++ + ..+++++++|+.++++++
T Consensus 20 ~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~~~~~ 94 (249)
T 3ftd_A 20 LKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPFCSLG 94 (249)
T ss_dssp HHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCGGGSC
T ss_pred HHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCChhHcc
Confidence 344555556678899999999999999999998767999999999 99999876 1 256999999999887652
Q ss_pred CceeEEEEecCcccc
Q 016992 188 TKVDIIISEWMGYFL 202 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l 202 (379)
..+ .|+++++ |.+
T Consensus 95 ~~~-~vv~NlP-y~i 107 (249)
T 3ftd_A 95 KEL-KVVGNLP-YNV 107 (249)
T ss_dssp SSE-EEEEECC-TTT
T ss_pred CCc-EEEEECc-hhc
Confidence 233 7777754 443
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.81 E-value=4.7e-09 Score=95.02 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=65.7
Q ss_pred HHhccCCCCC--CEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC--------CCCcEEEEEcceee
Q 016992 114 IYQNKFLFKD--KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG--------FSNVITVLKGKIEE 182 (379)
Q Consensus 114 i~~~~~~~~~--~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~--------~~~~i~~~~~d~~~ 182 (379)
+.+.....++ .+|||+|||+|..++.+|..|. +|++||.++ ++..++++++... +.++++++++|+.+
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 3334445566 8999999999999999999876 799999999 9888888765431 32469999999988
Q ss_pred cc--CCCCceeEEEEecC
Q 016992 183 IE--LPVTKVDIIISEWM 198 (379)
Q Consensus 183 ~~--~~~~~~D~Iv~~~~ 198 (379)
+. ++ .+||+|+++++
T Consensus 157 ~L~~~~-~~fDvV~lDP~ 173 (258)
T 2oyr_A 157 ALTDIT-PRPQVVYLDPM 173 (258)
T ss_dssp HSTTCS-SCCSEEEECCC
T ss_pred HHHhCc-ccCCEEEEcCC
Confidence 52 23 47999999986
No 275
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.80 E-value=7.5e-09 Score=103.71 Aligned_cols=113 Identities=13% Similarity=-0.027 Sum_probs=83.8
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc----C---------------CCEEEEEecHH-HHHHHHHHHHHcCCCC-
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA----G---------------AAHVYAVECSQ-MANMAKQIVEANGFSN- 171 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~----g---------------~~~v~~vD~s~-~~~~a~~~~~~~~~~~- 171 (379)
.+.+.....++.+|||.|||+|.+++.+++. + ...++|+|+++ ++..|+.++...|+..
T Consensus 160 ~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~ 239 (541)
T 2ar0_A 160 TIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGN 239 (541)
T ss_dssp HHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCB
T ss_pred HHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCcc
Confidence 3444445567889999999999999888763 1 13799999999 9999999998888753
Q ss_pred ---cEEEEEcceeecc-CCCCceeEEEEecCccccCCh------------hhHHHHHHHHHhcccCCEEEE
Q 016992 172 ---VITVLKGKIEEIE-LPVTKVDIIISEWMGYFLLFE------------NMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 172 ---~i~~~~~d~~~~~-~~~~~~D~Iv~~~~~~~l~~~------------~~~~~~l~~~~~~LkpgG~li 226 (379)
.+.++++|....+ .+..+||+|+++++ +..... ..-..++..+.++|+|||++.
T Consensus 240 ~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPP-f~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 309 (541)
T 2ar0_A 240 LDHGGAIRLGNTLGSDGENLPKAHIVATNPP-FGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAA 309 (541)
T ss_dssp GGGTBSEEESCTTSHHHHTSCCEEEEEECCC-CTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEE
T ss_pred ccccCCeEeCCCcccccccccCCeEEEECCC-cccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEE
Confidence 2778999976543 23468999999975 332211 112367888889999999876
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.78 E-value=3.2e-09 Score=96.04 Aligned_cols=84 Identities=11% Similarity=0.099 Sum_probs=63.8
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCE--EEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCC-
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAH--VYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPV- 187 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~--v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~- 187 (379)
+.|.+.....++.+|||||||+|.++. +++. .+ |+|+|+++ |++.+++++... ++++++++|+.++++++
T Consensus 11 ~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~~--~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~ 84 (252)
T 1qyr_A 11 DSIVSAINPQKGQAMVEIGPGLAALTE-PVGE--RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGEL 84 (252)
T ss_dssp HHHHHHHCCCTTCCEEEECCTTTTTHH-HHHT--TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHH
T ss_pred HHHHHhcCCCCcCEEEEECCCCcHHHH-hhhC--CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHh
Confidence 334444556788899999999999999 7653 36 99999999 999999876532 46999999999876541
Q ss_pred ----CceeEEEEecCcccc
Q 016992 188 ----TKVDIIISEWMGYFL 202 (379)
Q Consensus 188 ----~~~D~Iv~~~~~~~l 202 (379)
+..|+|+++++ |.+
T Consensus 85 ~~~~~~~~~vvsNlP-Y~i 102 (252)
T 1qyr_A 85 AEKMGQPLRVFGNLP-YNI 102 (252)
T ss_dssp HHHHTSCEEEEEECC-TTT
T ss_pred hcccCCceEEEECCC-CCc
Confidence 23478888864 443
No 277
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.71 E-value=2.9e-08 Score=90.94 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=82.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHc--C-C-CCcEEEEEcceeeccC-CCCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEAN--G-F-SNVITVLKGKIEEIEL-PVTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~--~-~-~~~i~~~~~d~~~~~~-~~~~~D~I 193 (379)
...++||-||.|.|..+..+.+. +..+|+.||+++ +++.|++.+... + + ..+++++.+|+..+-. ..++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45679999999999999999995 568999999999 999999987542 1 1 3679999999987642 25789999
Q ss_pred EEecCccccCChh-hHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip 227 (379)
+.+.......... .-..+++.+.+.|+|||+++.
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 9986432211111 124788899999999999984
No 278
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.64 E-value=3.4e-08 Score=88.80 Aligned_cols=105 Identities=18% Similarity=0.235 Sum_probs=69.8
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
..+.++.+|||||||+|.++..+++. +...|+|+|+.. +....... ...++ ++..+..++....++.++||+|+|
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~--~ii~~~~~~dv~~l~~~~~DlVls 146 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGW--NIITFKDKTDIHRLEPVKCDTLLC 146 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTG--GGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCC--CeEEEeccceehhcCCCCccEEEe
Confidence 55678889999999999999998874 677889998874 31000000 00011 344456666555566689999999
Q ss_pred ecCccccCChhhH-----HHHHHHHHhcccCC-EEEEe
Q 016992 196 EWMGYFLLFENML-----NTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 196 ~~~~~~l~~~~~~-----~~~l~~~~~~Lkpg-G~lip 227 (379)
+.... .+.... -.+++.+.++|+|| |.|+.
T Consensus 147 D~apn--sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 147 DIGES--SSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp CCCCC--CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cCccC--cCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 87544 121111 13467888999999 99983
No 279
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.64 E-value=3.3e-08 Score=98.91 Aligned_cols=112 Identities=14% Similarity=0.061 Sum_probs=80.9
Q ss_pred HHHhccCCCCCCEEEEEcCCCchHHHHHHHc--------C--------CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEE
Q 016992 113 VIYQNKFLFKDKVVLDVGAGTGILSLFCAKA--------G--------AAHVYAVECSQ-MANMAKQIVEANGFSNVITV 175 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~--------g--------~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~ 175 (379)
.|.......++ +|||.|||+|.+.+.+++. + ...++|+|+++ ++.+|+.++...|+..++.+
T Consensus 236 lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i 314 (544)
T 3khk_A 236 LIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGK 314 (544)
T ss_dssp HHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCS
T ss_pred HHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccce
Confidence 34433344444 9999999999998877542 0 34899999999 99999999999888765555
Q ss_pred EEcceeecc-CCCCceeEEEEecCccccCC--------------------------hh-hHHHHHHHHHhcccCCEEEE
Q 016992 176 LKGKIEEIE-LPVTKVDIIISEWMGYFLLF--------------------------EN-MLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 176 ~~~d~~~~~-~~~~~~D~Iv~~~~~~~l~~--------------------------~~-~~~~~l~~~~~~LkpgG~li 226 (379)
.++|....+ .+..+||+|+++++ |.... .. .--.++..+.+.|+|||++.
T Consensus 315 ~~gDtL~~~~~~~~~fD~Iv~NPP-f~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a 392 (544)
T 3khk_A 315 KNADSFLDDQHPDLRADFVMTNPP-FNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMA 392 (544)
T ss_dssp SSCCTTTSCSCTTCCEEEEEECCC-SSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEE
T ss_pred eccchhcCcccccccccEEEECCC-cCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEE
Confidence 888876543 33578999999975 43210 00 01257888889999999876
No 280
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.64 E-value=1.2e-07 Score=94.74 Aligned_cols=106 Identities=15% Similarity=0.099 Sum_probs=82.2
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHc----CCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcceeec--c-CCCCce
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKA----GAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEI--E-LPVTKV 190 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~----g~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~--~-~~~~~~ 190 (379)
..++.+|||.|||+|.+.+.+++. +...++|+|+++ ++.+|+.++...|+. +++.+.++|.... + ....+|
T Consensus 219 ~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~f 298 (542)
T 3lkd_A 219 DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNF 298 (542)
T ss_dssp TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCB
T ss_pred CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccc
Confidence 357789999999999998888874 346999999999 999999999988885 4689999998765 2 235789
Q ss_pred eEEEEecCccccCCh--------------h------h-HHHHHHHHHhccc-CCEEEE
Q 016992 191 DIIISEWMGYFLLFE--------------N------M-LNTVLYARDKWLV-DDGIVL 226 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~--------------~------~-~~~~l~~~~~~Lk-pgG~li 226 (379)
|+|+++|+ |..... + . --.++..+.+.|+ |||++.
T Consensus 299 D~IvaNPP-f~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a 355 (542)
T 3lkd_A 299 DGVLMNPP-YSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMA 355 (542)
T ss_dssp SEEEECCC-TTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEE
T ss_pred cEEEecCC-cCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEE
Confidence 99999975 322110 0 0 0147888889999 999875
No 281
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.58 E-value=1e-07 Score=89.64 Aligned_cols=71 Identities=18% Similarity=0.225 Sum_probs=58.5
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
+.+|.+||||||++|+++..+++.|. +|+|||+.+|-..... . .+|+++++|+..+..+..+||+|+|++.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~~~l~~----~---~~V~~~~~d~~~~~~~~~~~D~vvsDm~ 279 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMAQSLMD----T---GQVTWLREDGFKFRPTRSNISWMVCDMV 279 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCCHHHHT----T---TCEEEECSCTTTCCCCSSCEEEEEECCS
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcChhhcc----C---CCeEEEeCccccccCCCCCcCEEEEcCC
Confidence 57899999999999999999999875 9999998773332221 1 4699999999988776678999999864
No 282
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.58 E-value=5.3e-07 Score=82.39 Aligned_cols=119 Identities=9% Similarity=0.075 Sum_probs=86.2
Q ss_pred HHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc------CCCEEEEEecH--------------------------
Q 016992 107 TKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA------GAAHVYAVECS-------------------------- 154 (379)
Q Consensus 107 ~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~------g~~~v~~vD~s-------------------------- 154 (379)
...+...+...........|||+|+..|..++.++.. ...+|+++|..
T Consensus 91 ~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~ 170 (282)
T 2wk1_A 91 LENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVL 170 (282)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHH
T ss_pred HHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccc
Confidence 3333333333222344569999999999998888763 25689999953
Q ss_pred H-HHHHHHHHHHHcCCC-CcEEEEEcceeecc--CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 155 Q-MANMAKQIVEANGFS-NVITVLKGKIEEIE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 155 ~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~--~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
. .++.+++++++.|+. ++|+++.+|+.+.- ++.++||+|+.+. + . + ......+..+...|+|||+++....
T Consensus 171 ~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D--~-y-~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 171 AVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-D--L-Y-ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-C--S-H-HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred hhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-C--c-c-ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 2 467789999999984 88999999997742 3346899999764 1 1 1 2345788899999999999997654
No 283
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.47 E-value=3.9e-08 Score=88.56 Aligned_cols=104 Identities=17% Similarity=0.196 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
..+.++.+|||||||+|.++..+++ .++..|+|+|+.. +...+... ...+ .++..+..++....++..++|+|+|
T Consensus 86 ~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g--~~ii~~~~~~dv~~l~~~~~DvVLS 162 (282)
T 3gcz_A 86 GYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG--WNLIRFKDKTDVFNMEVIPGDTLLC 162 (282)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT--GGGEEEECSCCGGGSCCCCCSEEEE
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC--CceEEeeCCcchhhcCCCCcCEEEe
Confidence 3567888999999999999999886 5778899999975 42222100 0011 1233334333333455689999999
Q ss_pred ecCccccCChhhH-----HHHHHHHHhcccCC--EEEE
Q 016992 196 EWMGYFLLFENML-----NTVLYARDKWLVDD--GIVL 226 (379)
Q Consensus 196 ~~~~~~l~~~~~~-----~~~l~~~~~~Lkpg--G~li 226 (379)
+.... .+.... ..+++-+.++|+|| |.|+
T Consensus 163 DmApn--sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv 198 (282)
T 3gcz_A 163 DIGES--SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFC 198 (282)
T ss_dssp CCCCC--CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred cCccC--CCChHHHHHHHHHHHHHHHHHcCCCCCCcEE
Confidence 96544 221211 13577778999999 9988
No 284
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.43 E-value=2.7e-07 Score=87.21 Aligned_cols=119 Identities=20% Similarity=0.182 Sum_probs=84.5
Q ss_pred HHHHHHHhcc-CCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc---CC----CCcEEEEEcc
Q 016992 109 SYQNVIYQNK-FLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN---GF----SNVITVLKGK 179 (379)
Q Consensus 109 ~~~~~i~~~~-~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~---~~----~~~i~~~~~d 179 (379)
.|.+.+.... ...++++||-||.|.|..+..+.+.+..+|+.||+++ +++.|++.+... .+ .++++++.+|
T Consensus 191 ~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~D 270 (381)
T 3c6k_A 191 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIED 270 (381)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESC
T ss_pred HHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHH
Confidence 3444454322 1235689999999999999999997778999999999 999999875321 11 1458999999
Q ss_pred eeecc----CCCCceeEEEEecCccccCC------h-hhHHHHHHHHHhcccCCEEEEe
Q 016992 180 IEEIE----LPVTKVDIIISEWMGYFLLF------E-NMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 180 ~~~~~----~~~~~~D~Iv~~~~~~~l~~------~-~~~~~~l~~~~~~LkpgG~lip 227 (379)
+..+- ...++||+|+.+........ . -....+++.+.+.|+|||+++.
T Consensus 271 a~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 271 CIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 87653 12368999999854321110 0 1125778889999999999984
No 285
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.37 E-value=5.7e-07 Score=92.11 Aligned_cols=105 Identities=13% Similarity=0.165 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-C---CCEEEEEecHH-HHHHH--HHHHHHcCCC---CcEEEEEcceeecc-CCCCc
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-G---AAHVYAVECSQ-MANMA--KQIVEANGFS---NVITVLKGKIEEIE-LPVTK 189 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-g---~~~v~~vD~s~-~~~~a--~~~~~~~~~~---~~i~~~~~d~~~~~-~~~~~ 189 (379)
.++.+|||.|||+|.+++.+++. + ..+++|+|+++ +++.| +.++..+++. ....+...|+.... ....+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 46789999999999999999884 3 24799999999 99999 5554432221 12355566665532 22478
Q ss_pred eeEEEEecCccccCC-hh--------------------------hHHHHHHHHHhcccCCEEEE
Q 016992 190 VDIIISEWMGYFLLF-EN--------------------------MLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~-~~--------------------------~~~~~l~~~~~~LkpgG~li 226 (379)
||+||++++ |+... .. ....++..+.++|+|||++.
T Consensus 400 FDVVIgNPP-Yg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLA 462 (878)
T 3s1s_A 400 VSVVVMNPP-YVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVIS 462 (878)
T ss_dssp EEEEEECCB-CCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEE
T ss_pred CCEEEECCC-ccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEE
Confidence 999999975 43211 00 12346777889999999976
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.36 E-value=8.2e-07 Score=80.26 Aligned_cols=106 Identities=21% Similarity=0.152 Sum_probs=71.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc-------CC------CEEEEEecHH---------------HHHHHHHHHHHc-----
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA-------GA------AHVYAVECSQ---------------MANMAKQIVEAN----- 167 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~-------g~------~~v~~vD~s~---------------~~~~a~~~~~~~----- 167 (379)
.++.+|||+|+|+|..++.+++. +. .+|+++|..+ +...|++.++..
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~ 138 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 138 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhcccccc
Confidence 35579999999999887776542 22 4899999753 223566665541
Q ss_pred -----CCC---CcEEEEEcceeec-c-CCC---CceeEEEEecCccccCChh-hHHHHHHHHHhcccCCEEEEe
Q 016992 168 -----GFS---NVITVLKGKIEEI-E-LPV---TKVDIIISEWMGYFLLFEN-MLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 168 -----~~~---~~i~~~~~d~~~~-~-~~~---~~~D~Iv~~~~~~~l~~~~-~~~~~l~~~~~~LkpgG~lip 227 (379)
.+. .+++++.+|+.+. + ++. ..||+|+.+.+...- +.. .-..++..+.++|+|||+|+.
T Consensus 139 g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~-~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 139 GCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAK-NPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTT-CGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred chhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCccc-ChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 111 3588999999874 3 221 279999987532111 112 136789999999999999983
No 287
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.31 E-value=4.4e-07 Score=79.11 Aligned_cols=104 Identities=17% Similarity=0.250 Sum_probs=70.0
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ceeeccCCCCceeEEE
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELPVTKVDIII 194 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D~Iv 194 (379)
..+.++.+||||||++|.++..++. .|+.+|+|+|+-. -.+ --..++..|+ +.|+|.++ |+..++. .++|.|+
T Consensus 74 ~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe-~P~~~~s~gw-n~v~fk~gvDv~~~~~--~~~Dtll 149 (267)
T 3p8z_A 74 NMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHE-EPVPMSTYGW-NIVKLMSGKDVFYLPP--EKCDTLL 149 (267)
T ss_dssp TSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSC-CCCCCCCTTT-TSEEEECSCCGGGCCC--CCCSEEE
T ss_pred cCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCcc-CcchhhhcCc-CceEEEeccceeecCC--ccccEEE
Confidence 3667889999999999999998887 5888999999865 111 0001123455 56999999 9866543 6799999
Q ss_pred EecCccccCChhhH---HHHHHHHHhcccCCEEEE
Q 016992 195 SEWMGYFLLFENML---NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 195 ~~~~~~~l~~~~~~---~~~l~~~~~~LkpgG~li 226 (379)
|+.-.+.-.-+-+- -.+|+-+.++|++ |-++
T Consensus 150 cDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc 183 (267)
T 3p8z_A 150 CDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFC 183 (267)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEE
T ss_pred EecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEE
Confidence 98532111101111 2367777899998 4443
No 288
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.30 E-value=3e-07 Score=83.36 Aligned_cols=109 Identities=17% Similarity=0.219 Sum_probs=68.2
Q ss_pred HHHHhccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCc
Q 016992 112 NVIYQNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTK 189 (379)
Q Consensus 112 ~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 189 (379)
+...+ ..+.++.+||||||++|.++..+++ .|+..|+|+|+.. +...... ....+. +.+.+ ..++.-..+..++
T Consensus 72 ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~-~~~~di~~l~~~~ 147 (300)
T 3eld_A 72 WLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKF-KDKSNVFTMPTEP 147 (300)
T ss_dssp HHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTG-GGEEE-ECSCCTTTSCCCC
T ss_pred HHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCC-ceEEe-ecCceeeecCCCC
Confidence 33344 4456889999999999999999998 4777899999864 3111000 000011 22333 3333323344578
Q ss_pred eeEEEEecCccccCChhhH-----HHHHHHHHhcccCC-EEEE
Q 016992 190 VDIIISEWMGYFLLFENML-----NTVLYARDKWLVDD-GIVL 226 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~-----~~~l~~~~~~Lkpg-G~li 226 (379)
+|+|+|+.... .+.... ..++.-+.++|+|| |.|+
T Consensus 148 ~DlVlsD~APn--sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV 188 (300)
T 3eld_A 148 SDTLLCDIGES--SSNPLVERDRTMKVLENFERWKHVNTENFC 188 (300)
T ss_dssp CSEEEECCCCC--CSSHHHHHHHHHHHHHHHHHHCCTTCCEEE
T ss_pred cCEEeecCcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 99999986544 222221 24577778999999 9998
No 289
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.27 E-value=1.6e-06 Score=78.51 Aligned_cols=75 Identities=19% Similarity=0.184 Sum_probs=62.7
Q ss_pred ccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----CCCCce
Q 016992 117 NKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKV 190 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~ 190 (379)
.+.+.++..+||++||.|..+..+++. ..+|+|+|.++ +++.|++ +.. ++++++++++.++. ...+++
T Consensus 17 ~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g~~~v 90 (285)
T 1wg8_A 17 LLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALGVERV 90 (285)
T ss_dssp HHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTTCSCE
T ss_pred hhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcCCCCc
Confidence 345678899999999999999999998 45999999999 9999988 543 47999999998874 123579
Q ss_pred eEEEEec
Q 016992 191 DIIISEW 197 (379)
Q Consensus 191 D~Iv~~~ 197 (379)
|.|++++
T Consensus 91 DgIL~DL 97 (285)
T 1wg8_A 91 DGILADL 97 (285)
T ss_dssp EEEEEEC
T ss_pred CEEEeCC
Confidence 9999874
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.19 E-value=2.5e-06 Score=69.16 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=51.3
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCc-hHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTG-ILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G-~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (379)
.+.+.|.+. ..++.+|||||||+| ..+..+++ .|. .|+++|+++ .++ +++.|+.+..+
T Consensus 24 ~LaeYI~~~--~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~~ 84 (153)
T 2k4m_A 24 DLAVYIIRC--SGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPRM 84 (153)
T ss_dssp HHHHHHHHH--SCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCCH
T ss_pred HHHHHHHhc--CCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCcc
Confidence 344455543 245679999999999 59999998 776 899999998 544 78888877443
Q ss_pred C-CCceeEEEEe
Q 016992 186 P-VTKVDIIISE 196 (379)
Q Consensus 186 ~-~~~~D~Iv~~ 196 (379)
. -+.||+|.+-
T Consensus 85 ~~Y~~~DLIYsi 96 (153)
T 2k4m_A 85 EIYRGAALIYSI 96 (153)
T ss_dssp HHHTTEEEEEEE
T ss_pred cccCCcCEEEEc
Confidence 2 1489999763
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=98.16 E-value=8.6e-06 Score=73.43 Aligned_cols=105 Identities=20% Similarity=0.243 Sum_probs=69.4
Q ss_pred hccCCCCCCEEEEEcCCCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ceeeccCCCCceeE
Q 016992 116 QNKFLFKDKVVLDVGAGTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELPVTKVDI 192 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D~ 192 (379)
+...+.++.+||||||++|.++..++. .|+.+|+|+|+-. -.+. -..++..++ +-|.+..+ |+..++. .++|+
T Consensus 88 ~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~-P~~~~ql~w-~lV~~~~~~Dv~~l~~--~~~D~ 163 (321)
T 3lkz_A 88 ERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEE-PQLVQSYGW-NIVTMKSGVDVFYRPS--ECCDT 163 (321)
T ss_dssp HTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCC-CCCCCBTTG-GGEEEECSCCTTSSCC--CCCSE
T ss_pred HhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccC-cchhhhcCC-cceEEEeccCHhhCCC--CCCCE
Confidence 335667888999999999999998777 5888999999864 1100 000012233 34888887 8776654 67999
Q ss_pred EEEecCccccCChhhH-----HHHHHHHHhcccCC-EEEE
Q 016992 193 IISEWMGYFLLFENML-----NTVLYARDKWLVDD-GIVL 226 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~-----~~~l~~~~~~Lkpg-G~li 226 (379)
|+|+. +..-.. ... -.+|+-+.++|++| |-|+
T Consensus 164 ivcDi-geSs~~-~~ve~~Rtl~vLel~~~wL~~~~~~f~ 201 (321)
T 3lkz_A 164 LLCDI-GESSSS-AEVEEHRTIRVLEMVEDWLHRGPREFC 201 (321)
T ss_dssp EEECC-CCCCSC-HHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEC-ccCCCC-hhhhhhHHHHHHHHHHHHhccCCCcEE
Confidence 99985 322111 111 23677778999988 6655
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.15 E-value=8.1e-06 Score=72.37 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=63.3
Q ss_pred cCCCCCCEEEEEcCCCchHHHHHHHc-CC----CEEEEEe--cHHHHHHHHHHHHHcCCCCcEEEEEc-ceeeccCCCCc
Q 016992 118 KFLFKDKVVLDVGAGTGILSLFCAKA-GA----AHVYAVE--CSQMANMAKQIVEANGFSNVITVLKG-KIEEIELPVTK 189 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G~~~~~la~~-g~----~~v~~vD--~s~~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~ 189 (379)
.-+.+|.+||||||++|.++..+++. +. +.|+|+| +.++... ..|+ +-+++.++ |+.++. ..+
T Consensus 69 ~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~------~~Gv-~~i~~~~G~Df~~~~--~~~ 139 (269)
T 2px2_A 69 RFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ------SYGW-NIVTMKSGVDVFYKP--SEI 139 (269)
T ss_dssp TSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC------STTG-GGEEEECSCCGGGSC--CCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc------CCCc-eEEEeeccCCccCCC--CCC
Confidence 35678999999999999999999885 33 3455555 2221000 0121 23566667 998753 368
Q ss_pred eeEEEEecCccccCChhhHH-----HHHHHHHhcccCCE-EEE
Q 016992 190 VDIIISEWMGYFLLFENMLN-----TVLYARDKWLVDDG-IVL 226 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~-----~~l~~~~~~LkpgG-~li 226 (379)
+|+|+|++... .+....+ .+|+-+.++|+||| .|+
T Consensus 140 ~DvVLSDMAPn--SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~Fv 180 (269)
T 2px2_A 140 SDTLLCDIGES--SPSAEIEEQRTLRILEMVSDWLSRGPKEFC 180 (269)
T ss_dssp CSEEEECCCCC--CSCHHHHHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred CCEEEeCCCCC--CCccHHHHHHHHHHHHHHHHHhhcCCcEEE
Confidence 99999996543 2222221 25666678999999 776
No 293
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.07 E-value=5e-05 Score=72.08 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=64.9
Q ss_pred CCEEEEEcCCCchHHHHHHH---------c-------CCCEEEEEecHH-HHHHHHHHHHHc-----------CCCCcEE
Q 016992 123 DKVVLDVGAGTGILSLFCAK---------A-------GAAHVYAVECSQ-MANMAKQIVEAN-----------GFSNVIT 174 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~---------~-------g~~~v~~vD~s~-~~~~a~~~~~~~-----------~~~~~i~ 174 (379)
..+|+|+|||+|..++.+.. . +.-+|+.-|+.. .....-+.+... +...+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 57899999999988887732 1 124777888766 332222222211 0000111
Q ss_pred EEE---cceeeccCCCCceeEEEEecCccccCChh-----------------------------------hHHHHHHHHH
Q 016992 175 VLK---GKIEEIELPVTKVDIIISEWMGYFLLFEN-----------------------------------MLNTVLYARD 216 (379)
Q Consensus 175 ~~~---~d~~~~~~~~~~~D~Iv~~~~~~~l~~~~-----------------------------------~~~~~l~~~~ 216 (379)
|+. +....-.+|.+++|+|+|....+.+...+ ++..+|+.+.
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233 33333346779999999987656554211 5567899999
Q ss_pred hcccCCEEEEe
Q 016992 217 KWLVDDGIVLP 227 (379)
Q Consensus 217 ~~LkpgG~lip 227 (379)
+.|+|||+++.
T Consensus 213 ~eL~pGG~mvl 223 (374)
T 3b5i_A 213 AEVKRGGAMFL 223 (374)
T ss_dssp HHEEEEEEEEE
T ss_pred HHhCCCCEEEE
Confidence 99999999984
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.03 E-value=1.6e-05 Score=79.28 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=64.8
Q ss_pred HHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc----C----------CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEE
Q 016992 111 QNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA----G----------AAHVYAVECSQ-MANMAKQIVEANGFSNVITV 175 (379)
Q Consensus 111 ~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~----g----------~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~ 175 (379)
.+.+.+.....++.+|+|-+||+|.+...+.+. . ...++|+|+++ +..+|+-++--.|+. .-.+
T Consensus 206 v~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~-~~~I 284 (530)
T 3ufb_A 206 VRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE-YPRI 284 (530)
T ss_dssp HHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS-CCEE
T ss_pred HHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc-cccc
Confidence 344455555677889999999999998877652 1 13699999999 999999888877774 3467
Q ss_pred EEcceeeccC----CCCceeEEEEecC
Q 016992 176 LKGKIEEIEL----PVTKVDIIISEWM 198 (379)
Q Consensus 176 ~~~d~~~~~~----~~~~~D~Iv~~~~ 198 (379)
.++|....+. +..+||+|+++|+
T Consensus 285 ~~~dtL~~~~~~~~~~~~fD~Il~NPP 311 (530)
T 3ufb_A 285 DPENSLRFPLREMGDKDRVDVILTNPP 311 (530)
T ss_dssp ECSCTTCSCGGGCCGGGCBSEEEECCC
T ss_pred cccccccCchhhhcccccceEEEecCC
Confidence 7777655432 1357999999975
No 295
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.89 E-value=3.3e-05 Score=71.31 Aligned_cols=47 Identities=34% Similarity=0.357 Sum_probs=43.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcC
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANG 168 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~ 168 (379)
.+|..|||++||+|.+++.+++.|. +++|+|+++ +++.|++++....
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHhc
Confidence 6889999999999999999999875 999999999 9999999997753
No 296
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.77 E-value=0.00012 Score=65.96 Aligned_cols=106 Identities=13% Similarity=0.091 Sum_probs=68.8
Q ss_pred HHHHHHHHHHh-ccCCCCCCEEEEEcC------CCchHHHHHHHcCC--CEEEEEecHHHHHHHHHHHHHcCCCCcEEEE
Q 016992 106 RTKSYQNVIYQ-NKFLFKDKVVLDVGA------GTGILSLFCAKAGA--AHVYAVECSQMANMAKQIVEANGFSNVITVL 176 (379)
Q Consensus 106 r~~~~~~~i~~-~~~~~~~~~VLDlGc------G~G~~~~~la~~g~--~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~ 176 (379)
.+..+.+.+.. ......|.+|||+|+ .+|. ..+.+.+. ..|+++|+.++.. ..+ .++
T Consensus 92 kytqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s----------da~--~~I 157 (344)
T 3r24_A 92 KYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS----------DAD--STL 157 (344)
T ss_dssp HHHHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC----------SSS--EEE
T ss_pred HHHHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc----------CCC--eEE
Confidence 34444444532 345677999999997 5676 34444433 3999999988211 112 459
Q ss_pred EcceeeccCCCCceeEEEEecCccccC--------ChhhHHHHHHHHHhcccCCEEEE
Q 016992 177 KGKIEEIELPVTKVDIIISEWMGYFLL--------FENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 177 ~~d~~~~~~~~~~~D~Iv~~~~~~~l~--------~~~~~~~~l~~~~~~LkpgG~li 226 (379)
++|...+... .+||+|+|++...--. .....+.+++-+.+.|+|||.|+
T Consensus 158 qGD~~~~~~~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFv 214 (344)
T 3r24_A 158 IGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIA 214 (344)
T ss_dssp ESCGGGEEES-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEE
T ss_pred EccccccccC-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEE
Confidence 9998766554 8899999985322111 11235667777888999999998
No 297
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.75 E-value=6.9e-05 Score=71.23 Aligned_cols=102 Identities=14% Similarity=0.083 Sum_probs=64.4
Q ss_pred CCEEEEEcCCCchHHHHHHHc------------------CCCEEEEEecH-----------H-HHHHHHHHHHHcCCCCc
Q 016992 123 DKVVLDVGAGTGILSLFCAKA------------------GAAHVYAVECS-----------Q-MANMAKQIVEANGFSNV 172 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~------------------g~~~v~~vD~s-----------~-~~~~a~~~~~~~~~~~~ 172 (379)
..+|+|+|||+|..++.+... +.-+|+.-|+. + +.+.+ .+..|-..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~---~~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNL---EKENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHH---HHHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhh---hhhccCCCC
Confidence 478999999999888876543 11367788865 2 22221 122332112
Q ss_pred EEEEEcceee---ccCCCCceeEEEEecCccccCChh------------------------------------hHHHHHH
Q 016992 173 ITVLKGKIEE---IELPVTKVDIIISEWMGYFLLFEN------------------------------------MLNTVLY 213 (379)
Q Consensus 173 i~~~~~d~~~---~~~~~~~~D~Iv~~~~~~~l~~~~------------------------------------~~~~~l~ 213 (379)
-.|+.+.... -.++.+++|+|+|....+.+...+ ++..+|+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3455555444 347789999999986555543321 1234488
Q ss_pred HHHhcccCCEEEEe
Q 016992 214 ARDKWLVDDGIVLP 227 (379)
Q Consensus 214 ~~~~~LkpgG~lip 227 (379)
.+.+.|+|||+++.
T Consensus 210 ~Ra~eL~pGG~mvl 223 (384)
T 2efj_A 210 IHSEELISRGRMLL 223 (384)
T ss_dssp HHHHHEEEEEEEEE
T ss_pred HHHHHhccCCeEEE
Confidence 88999999999984
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.42 E-value=0.00027 Score=65.47 Aligned_cols=79 Identities=16% Similarity=0.246 Sum_probs=62.1
Q ss_pred HHhccCCCCCCEEEEEcCCCchHHHHHHHc-C-CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--CC--
Q 016992 114 IYQNKFLFKDKVVLDVGAGTGILSLFCAKA-G-AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--LP-- 186 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g-~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~~-- 186 (379)
+...+...+|..++|..||.|..+..+++. | .++|+|+|.++ +++.|+ ++ ..+++++++++..++. ++
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~ 123 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAER 123 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhc
Confidence 334456688999999999999999999984 3 47999999999 999884 33 2368999999988864 11
Q ss_pred --CCceeEEEEec
Q 016992 187 --VTKVDIIISEW 197 (379)
Q Consensus 187 --~~~~D~Iv~~~ 197 (379)
.+++|.|+.++
T Consensus 124 g~~~~vDgILfDL 136 (347)
T 3tka_A 124 DLIGKIDGILLDL 136 (347)
T ss_dssp TCTTCEEEEEEEC
T ss_pred CCCCcccEEEECC
Confidence 13699999874
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.39 E-value=0.00026 Score=63.92 Aligned_cols=48 Identities=19% Similarity=0.290 Sum_probs=42.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCC
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGF 169 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~ 169 (379)
.+|..|||..||+|..+..+.+.|. +++|+|+++ .++.|++++..+++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhccC
Confidence 6889999999999999999999875 999999999 99999999986653
No 300
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.39 E-value=0.00012 Score=69.02 Aligned_cols=106 Identities=15% Similarity=0.176 Sum_probs=68.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHc------------C-----CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce---
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA------------G-----AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--- 180 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~------------g-----~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--- 180 (379)
...+|+|+||++|..++.+... + .-+|+..|+.. ....+-+.+....-..+-.|+.+..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3457999999999766644321 1 24788999887 6665555443211001224444443
Q ss_pred eeccCCCCceeEEEEecCccccCC------------------------------hhhHHHHHHHHHhcccCCEEEEe
Q 016992 181 EEIELPVTKVDIIISEWMGYFLLF------------------------------ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 181 ~~~~~~~~~~D~Iv~~~~~~~l~~------------------------------~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..-.++.+++|+|+|....+.+.. ..++..+|+.+.+.|+|||+++.
T Consensus 131 y~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl 207 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVL 207 (359)
T ss_dssp SSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEE
T ss_pred hhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEE
Confidence 334577899999999765444432 12456779999999999999984
No 301
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.32 E-value=0.00042 Score=65.14 Aligned_cols=78 Identities=15% Similarity=0.125 Sum_probs=59.1
Q ss_pred HhhcCHHHHHHHHHHHHhccCCC------CCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCC
Q 016992 99 EMLKDVVRTKSYQNVIYQNKFLF------KDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFS 170 (379)
Q Consensus 99 ~~l~d~~r~~~~~~~i~~~~~~~------~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~ 170 (379)
.+|.|..-.+...+++. +. ++..|||||.|.|.++..+++. .+++|++||++. ++...++.. . .
T Consensus 33 nFL~d~~i~~~Iv~~~~----l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~ 104 (353)
T 1i4w_A 33 KYLWNPTVYNKIFDKLD----LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---G 104 (353)
T ss_dssp CCBCCHHHHHHHHHHHC----GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---T
T ss_pred CccCCHHHHHHHHHhcc----CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---C
Confidence 35556654545444443 22 4689999999999999999985 457999999999 999988876 2 2
Q ss_pred CcEEEEEcceeecc
Q 016992 171 NVITVLKGKIEEIE 184 (379)
Q Consensus 171 ~~i~~~~~d~~~~~ 184 (379)
++++++++|+.++.
T Consensus 105 ~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 105 SPLQILKRDPYDWS 118 (353)
T ss_dssp SSCEEECSCTTCHH
T ss_pred CCEEEEECCccchh
Confidence 57999999997653
No 302
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.27 E-value=0.00011 Score=66.53 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=78.7
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-c--
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-E-- 184 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~-- 184 (379)
.|...|.. ..+..+||+-+|||.+++.+.+ +..+++.||.++ .++..++++.. .+++++++.|.... .
T Consensus 82 ~yf~~l~~----~n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l 153 (283)
T 2oo3_A 82 EYISVIKQ----INLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNAL 153 (283)
T ss_dssp HHHHHHHH----HSSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHH
T ss_pred HHHHHHHH----hcCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHh
Confidence 45555554 2355689999999999999888 457999999999 99999888864 26799999997542 1
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHh--cccCCEEEE
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDK--WLVDDGIVL 226 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~--~LkpgG~li 226 (379)
.+..+||+|+.+++ |.. ..+...++..+.+ .+.|+|+++
T Consensus 154 ~~~~~~fdLVfiDPP-Ye~--k~~~~~vl~~L~~~~~r~~~Gi~v 195 (283)
T 2oo3_A 154 LPPPEKRGLIFIDPS-YER--KEEYKEIPYAIKNAYSKFSTGLYC 195 (283)
T ss_dssp CSCTTSCEEEEECCC-CCS--TTHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cCCCCCccEEEECCC-CCC--CcHHHHHHHHHHHhCccCCCeEEE
Confidence 23357999999974 432 1355666655544 467889887
No 303
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.25 E-value=0.00092 Score=63.59 Aligned_cols=74 Identities=24% Similarity=0.099 Sum_probs=59.9
Q ss_pred CEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC--------CCCceeEEE
Q 016992 124 KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------PVTKVDIII 194 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~~D~Iv 194 (379)
.+|+||.||.|++++.+.++|...|.++|+++ +++..+.++. ...++++|+.++.. ....+|+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ 76 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDGII 76 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeEEE
Confidence 47999999999999999999988889999999 8887776642 35788899987642 236799999
Q ss_pred EecCccccC
Q 016992 195 SEWMGYFLL 203 (379)
Q Consensus 195 ~~~~~~~l~ 203 (379)
..++|..+.
T Consensus 77 ggpPCQ~fS 85 (376)
T 3g7u_A 77 GGPPCQGFS 85 (376)
T ss_dssp ECCCCCTTC
T ss_pred ecCCCCCcc
Confidence 988776554
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.05 E-value=0.00094 Score=62.30 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC-CCceeEEEEecCc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP-VTKVDIIISEWMG 199 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~Iv~~~~~ 199 (379)
.+.+|+|+.||.|.+++.+.++|...|.++|+++ +++..+.++... . ++|+.++... ...+|+|+..++|
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~~~~~D~l~~gpPC 81 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKTIPDHDILCAGFPC 81 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGGSCCCSEEEEECCC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhhCCCCCEEEECCCC
Confidence 4579999999999999999999998899999999 988888876421 1 6788776422 2358999998876
Q ss_pred cccC
Q 016992 200 YFLL 203 (379)
Q Consensus 200 ~~l~ 203 (379)
..+.
T Consensus 82 Q~fS 85 (327)
T 2c7p_A 82 QAFS 85 (327)
T ss_dssp TTTC
T ss_pred CCcc
Confidence 6553
No 305
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.92 E-value=0.00044 Score=65.01 Aligned_cols=73 Identities=21% Similarity=0.149 Sum_probs=55.9
Q ss_pred CEEEEEcCCCchHHHHHHHcC--CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---CCCceeEEEEec
Q 016992 124 KVVLDVGAGTGILSLFCAKAG--AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDIIISEW 197 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~~g--~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~Iv~~~ 197 (379)
.+|+|+.||.|.+++.+.++| ...|+++|+++ +++..+.++.. ..++++|+.++.. +...+|+|+..+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFDRLSFDMILMSP 76 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHHHHCCSEEEECC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcCcCCcCEEEEcC
Confidence 479999999999999999988 56899999999 98888887532 3477889888742 112689999988
Q ss_pred Ccccc
Q 016992 198 MGYFL 202 (379)
Q Consensus 198 ~~~~l 202 (379)
+|..+
T Consensus 77 PCq~f 81 (343)
T 1g55_A 77 PCQPF 81 (343)
T ss_dssp C----
T ss_pred CCcch
Confidence 75544
No 306
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.77 E-value=0.0098 Score=55.50 Aligned_cols=120 Identities=13% Similarity=0.159 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHc-CCCEEEEEecHHHHHHHHHHHHHcC---------------
Q 016992 105 VRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKA-GAAHVYAVECSQMANMAKQIVEANG--------------- 168 (379)
Q Consensus 105 ~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~--------------- 168 (379)
.|+..+.+.+.+.+...+...|+.||||.......+... +...++-||..++++.-++.+...+
T Consensus 80 ~Rt~~iD~~v~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~ 159 (334)
T 1rjd_A 80 LRTVGIDAAILEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAK 159 (334)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCC
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccc
Confidence 355555555544332245679999999999888888763 4457888888447777777776652
Q ss_pred -----CCCcEEEEEcceeecc--------C-CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 169 -----FSNVITVLKGKIEEIE--------L-PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 169 -----~~~~i~~~~~d~~~~~--------~-~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.+++..++.+|+.+.. . ......+++++.+..++. +.....+++.+...+ |+|.++
T Consensus 160 ~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~-~~~~~~ll~~ia~~~-~~~~~v 229 (334)
T 1rjd_A 160 SPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMH-NNESQLLINTIMSKF-SHGLWI 229 (334)
T ss_dssp TTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHC-SSEEEE
T ss_pred cccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCC-HHHHHHHHHHHHhhC-CCcEEE
Confidence 1367999999988742 1 225679999998766654 456678888888776 677664
No 307
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.61 E-value=0.0093 Score=56.38 Aligned_cols=98 Identities=23% Similarity=0.284 Sum_probs=64.7
Q ss_pred HHhccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-----cC
Q 016992 114 IYQNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-----EL 185 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~ 185 (379)
+.......+|.+||.+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++. |.. .++..+-.++ ..
T Consensus 182 l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~---~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 182 CINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT---HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp HHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS---EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC---EEecCCccCHHHHHHHh
Confidence 33445678899999999886 778888888 5877899999998 88887643 432 1222211111 01
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+.+|+|+-. .+ . ...+....+.|+++|+++.
T Consensus 255 ~~gg~D~vid~-~g----~----~~~~~~~~~~l~~~G~iv~ 287 (371)
T 1f8f_A 255 TDGGVNFALES-TG----S----PEILKQGVDALGILGKIAV 287 (371)
T ss_dssp TTSCEEEEEEC-SC----C----HHHHHHHHHTEEEEEEEEE
T ss_pred cCCCCcEEEEC-CC----C----HHHHHHHHHHHhcCCEEEE
Confidence 12379999843 21 1 2456667789999999873
No 308
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.32 E-value=0.0096 Score=57.22 Aligned_cols=63 Identities=17% Similarity=0.140 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcCCCchHHHHHH-Hc-C-CCEEEEEecHH-HHHHHHHHHHH--cCCC-CcEEEEEcceee
Q 016992 120 LFKDKVVLDVGAGTGILSLFCA-KA-G-AAHVYAVECSQ-MANMAKQIVEA--NGFS-NVITVLKGKIEE 182 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la-~~-g-~~~v~~vD~s~-~~~~a~~~~~~--~~~~-~~i~~~~~d~~~ 182 (379)
..++.+|+|+||+.|..+..++ +. + .++|+++|+++ ..+..+++++. |+.. .++++++.-+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 3688999999999999999888 43 4 37999999999 99999999998 4333 578888765543
No 309
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.21 E-value=0.0074 Score=56.16 Aligned_cols=73 Identities=8% Similarity=0.039 Sum_probs=56.7
Q ss_pred CCEEEEEcCCCchHHHHHHHcCC--CEE-EEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---CCCceeEEEE
Q 016992 123 DKVVLDVGAGTGILSLFCAKAGA--AHV-YAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDIIIS 195 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~g~--~~v-~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~Iv~ 195 (379)
..+|+|+.||.|++++.+.++|. ..| .++|+++ +++..+.++.. . ++++|+.++.. +...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~--~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-----E--VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C--CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-----C--cccCChhhcCHHHhccCCCCEEEe
Confidence 45899999999999999999884 677 8999999 88888877632 1 56778877642 2236899999
Q ss_pred ecCcccc
Q 016992 196 EWMGYFL 202 (379)
Q Consensus 196 ~~~~~~l 202 (379)
.++|..+
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 8876665
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.18 E-value=0.009 Score=57.08 Aligned_cols=102 Identities=19% Similarity=0.152 Sum_probs=64.1
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-----c--CC
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-----E--LP 186 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~--~~ 186 (379)
.....+|.+||.+|||. |.++..+|+ .|+.+|+++|.++ .++.+++ .|. .++..+-.++ . ..
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~~~~~~~ 251 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF----ETIDLRNSAPLRDQIDQILG 251 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC----EEEETTSSSCHHHHHHHHHS
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC----cEEcCCCcchHHHHHHHHhC
Confidence 35678999999999986 788888888 6877999999998 8877754 343 2232211111 0 11
Q ss_pred CCceeEEEEecCccccC-C-----hhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLL-F-----ENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~-~-----~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+|+|+-. .+.... + .......+....+.|++||+++.
T Consensus 252 g~g~Dvvid~-~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~ 297 (398)
T 2dph_A 252 KPEVDCGVDA-VGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI 297 (398)
T ss_dssp SSCEEEEEEC-SCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEEC
T ss_pred CCCCCEEEEC-CCCccccccccccccccHHHHHHHHHHHhcCCEEEE
Confidence 2369999853 221100 0 00012356667789999999873
No 311
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.13 E-value=0.012 Score=53.93 Aligned_cols=77 Identities=16% Similarity=0.035 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHcCCCE--EEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC----CCceeEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKAGAAH--VYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP----VTKVDII 193 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~g~~~--v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~D~I 193 (379)
..+.+|+|+-||.|++++.+.++|... |.++|+++ +++..+.+.. ...++.+|+.++... .+.+|++
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcccCCcCEE
Confidence 456699999999999999999998766 79999999 7776665532 245788999887521 1469999
Q ss_pred EEecCccccC
Q 016992 194 ISEWMGYFLL 203 (379)
Q Consensus 194 v~~~~~~~l~ 203 (379)
+..++|..+.
T Consensus 88 ~ggpPCQ~fS 97 (295)
T 2qrv_A 88 IGGSPCNDLS 97 (295)
T ss_dssp EECCCCGGGB
T ss_pred EecCCCcccc
Confidence 9987665543
No 312
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.11 E-value=0.0081 Score=55.79 Aligned_cols=72 Identities=25% Similarity=0.194 Sum_probs=57.4
Q ss_pred CEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC-CCceeEEEEecCccc
Q 016992 124 KVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP-VTKVDIIISEWMGYF 201 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~Iv~~~~~~~ 201 (379)
.+||||-||.|++++.+-++|...|.++|+++ +++.-+.+. + -.++.+|+.++... ...+|+++..++|..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~ 73 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGGPPSQS 73 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECCCCGGG
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEecCCCCC
Confidence 37999999999999999899998889999999 877776653 2 25788999887532 257899998877665
Q ss_pred c
Q 016992 202 L 202 (379)
Q Consensus 202 l 202 (379)
+
T Consensus 74 f 74 (331)
T 3ubt_Y 74 W 74 (331)
T ss_dssp T
T ss_pred c
Confidence 4
No 313
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.06 E-value=0.0075 Score=57.09 Aligned_cols=98 Identities=22% Similarity=0.281 Sum_probs=63.4
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-cc----CCCC
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IE----LPVT 188 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~----~~~~ 188 (379)
.....+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ ..+.+++ .|....+.....|..+ +. ...+
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~~~g 252 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGLVPG 252 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSSSTT
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhccCC
Confidence 35678999999999875 777777887 5877999999999 8887765 3542111111111111 10 1124
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+|+|+-. .+. ...+....+.|++||.++.
T Consensus 253 g~Dvvid~-~G~--------~~~~~~~~~~l~~~G~vv~ 282 (370)
T 4ej6_A 253 GVDVVIEC-AGV--------AETVKQSTRLAKAGGTVVI 282 (370)
T ss_dssp CEEEEEEC-SCC--------HHHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEEC-CCC--------HHHHHHHHHHhccCCEEEE
Confidence 79999853 211 2456667789999999883
No 314
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.06 E-value=0.064 Score=49.36 Aligned_cols=122 Identities=7% Similarity=0.058 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhccCCCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCC--CCcEEEEEcceee
Q 016992 105 VRTKSYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGF--SNVITVLKGKIEE 182 (379)
Q Consensus 105 ~r~~~~~~~i~~~~~~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~--~~~i~~~~~d~~~ 182 (379)
.|+..+.+.+...... ....|++||||-=.....+......+|+=||.-..+...++.+...+. +.+..++.+|+.+
T Consensus 86 ~Rt~~~d~~v~~~~~~-g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 86 VRTNFFDTYFNNAVID-GIRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp HHHHHHHHHHHHHHHT-TCCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHHh-CCCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 3444444555443322 225799999997665443331112589999953388888888876542 3678999999876
Q ss_pred cc---------CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 183 IE---------LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 183 ~~---------~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
. +.....-+++++.+.+++.. .....+++.+...+.||+.++++.
T Consensus 165 -~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~-~~~~~ll~~l~~~~~~gs~l~~d~ 218 (310)
T 2uyo_A 165 -DWPPALRSAGFDPSARTAWLAEGLLMYLPA-TAQDGLFTEIGGLSAVGSRIAVET 218 (310)
T ss_dssp -CHHHHHHHTTCCTTSCEEEEECSCGGGSCH-HHHHHHHHHHHHTCCTTCEEEEEC
T ss_pred -hHHHHHHhccCCCCCCEEEEEechHhhCCH-HHHHHHHHHHHHhCCCCeEEEEEe
Confidence 2 12245577888877666654 467889999999889999988654
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.94 E-value=0.017 Score=54.03 Aligned_cols=96 Identities=19% Similarity=0.208 Sum_probs=63.3
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc------CC
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LP 186 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~ 186 (379)
......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+-.++. ..
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~ 232 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGAT---DIINYKNGDIVEQILKATD 232 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCC---EEECGGGSCHHHHHHHHTT
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCc---eEEcCCCcCHHHHHHHHcC
Confidence 345678899999999875 777888888 5777899999998 8887765 3432 22221111110 12
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+|+|+-. .+. ...+....+.|++||+++.
T Consensus 233 g~g~D~v~d~-~g~--------~~~~~~~~~~l~~~G~~v~ 264 (352)
T 3fpc_A 233 GKGVDKVVIA-GGD--------VHTFAQAVKMIKPGSDIGN 264 (352)
T ss_dssp TCCEEEEEEC-SSC--------TTHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEEEEC-CCC--------hHHHHHHHHHHhcCCEEEE
Confidence 2469999842 211 1345566688999999883
No 316
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.85 E-value=0.023 Score=50.81 Aligned_cols=104 Identities=16% Similarity=0.219 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHc--------CCCEEEEEecHH-HH------------------------HHHHHHH---
Q 016992 121 FKDKVVLDVGAGTGILSLFCAKA--------GAAHVYAVECSQ-MA------------------------NMAKQIV--- 164 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~~--------g~~~v~~vD~s~-~~------------------------~~a~~~~--- 164 (379)
.+| .|+|+|+-.|..++.++.. ...+|+++|.-+ +- +..++.+
T Consensus 69 vpG-~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 69 VPG-VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp SCS-EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCC-eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 455 8999999999888876652 237999999322 11 1122222
Q ss_pred ---HHcCC-CCcEEEEEcceeecc------CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 165 ---EANGF-SNVITVLKGKIEEIE------LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 165 ---~~~~~-~~~i~~~~~d~~~~~------~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
...+. .++|+++.+++.+.- .+..++|+|..+. +. + ......+..+...|+|||++++...
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~-D~---Y-~~t~~~le~~~p~l~~GGvIv~DD~ 218 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDL-DL---Y-EPTKAVLEAIRPYLTKGSIVAFDEL 218 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECC-CC---H-HHHHHHHHHHGGGEEEEEEEEESST
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcC-cc---c-chHHHHHHHHHHHhCCCcEEEEcCC
Confidence 12344 478999999997642 2345799999774 21 1 3345678888999999999996653
No 317
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.84 E-value=0.0066 Score=56.65 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=56.1
Q ss_pred CEEEEEcCCCchHHHHHHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---CCCceeEEEEec
Q 016992 124 KVVLDVGAGTGILSLFCAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---PVTKVDIIISEW 197 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~~g~--~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~Iv~~~ 197 (379)
.+++|+.||.|++++.+.++|. ..|.++|+++ +++.-+.++.. ..++++|+.++.. +...+|+++..+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhccCCCCEEEecC
Confidence 3799999999999999988886 6789999999 87777766532 3467788887752 223689999887
Q ss_pred Ccccc
Q 016992 198 MGYFL 202 (379)
Q Consensus 198 ~~~~l 202 (379)
+|..+
T Consensus 78 PCQ~f 82 (333)
T 4h0n_A 78 PCQPF 82 (333)
T ss_dssp CCCCS
T ss_pred CCcch
Confidence 76654
No 318
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.74 E-value=0.014 Score=54.35 Aligned_cols=94 Identities=15% Similarity=0.122 Sum_probs=62.6
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc--C--CCCc
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE--L--PVTK 189 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~--~~~~ 189 (379)
.....+|.+||-.|+|. |.++..+++ .|+ +|+++|.++ .++.+++ .|.. .++..+-.++. + ..+.
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~g~ 232 (340)
T 3s2e_A 161 VTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKEIGG 232 (340)
T ss_dssp TTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHSS
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHhCCC
Confidence 34678999999999986 888888888 577 999999998 8887754 4542 12221111110 0 0136
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+|+-.. + -...+....+.|+++|.++.
T Consensus 233 ~d~vid~~-g--------~~~~~~~~~~~l~~~G~iv~ 261 (340)
T 3s2e_A 233 AHGVLVTA-V--------SPKAFSQAIGMVRRGGTIAL 261 (340)
T ss_dssp EEEEEESS-C--------CHHHHHHHHHHEEEEEEEEE
T ss_pred CCEEEEeC-C--------CHHHHHHHHHHhccCCEEEE
Confidence 89888432 1 13456667789999999884
No 319
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.74 E-value=0.014 Score=54.71 Aligned_cols=95 Identities=28% Similarity=0.260 Sum_probs=62.2
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc---eeec----c-C
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK---IEEI----E-L 185 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d---~~~~----~-~ 185 (379)
.....+|.+||.+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+ ..++ . .
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~ 238 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQ 238 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHH
Confidence 34678899999999875 777788888 5777999999998 8777754 4542 222211 1111 0 0
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
....+|+|+-. .+ . ...+....+.|++||+++.
T Consensus 239 ~~~g~D~vid~-~g----~----~~~~~~~~~~l~~~G~iv~ 271 (356)
T 1pl8_A 239 LGCKPEVTIEC-TG----A----EASIQAGIYATRSGGTLVL 271 (356)
T ss_dssp HTSCCSEEEEC-SC----C----HHHHHHHHHHSCTTCEEEE
T ss_pred hCCCCCEEEEC-CC----C----hHHHHHHHHHhcCCCEEEE
Confidence 01469999853 21 1 2345566788999999883
No 320
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=95.72 E-value=0.02 Score=53.85 Aligned_cols=97 Identities=22% Similarity=0.135 Sum_probs=62.6
Q ss_pred HHHhccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 113 VIYQNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
++.......+|.+||-+|+|. |.++..+++ .|+ +|+++|.++ .++.+++ .|.. .++..+..++.
T Consensus 180 al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~ 251 (363)
T 3uog_A 180 ALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFA----LGAD---HGINRLEEDWVERVYA 251 (363)
T ss_dssp HHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHH----cCCC---EEEcCCcccHHHHHHH
Confidence 333446678999999999875 777777777 577 999999998 8877755 3442 22222211111
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+-.. + . ..+....+.|+++|.++.
T Consensus 252 ~~~g~g~D~vid~~-g----~-----~~~~~~~~~l~~~G~iv~ 285 (363)
T 3uog_A 252 LTGDRGADHILEIA-G----G-----AGLGQSLKAVAPDGRISV 285 (363)
T ss_dssp HHTTCCEEEEEEET-T----S-----SCHHHHHHHEEEEEEEEE
T ss_pred HhCCCCceEEEECC-C----h-----HHHHHHHHHhhcCCEEEE
Confidence 1224799998542 2 1 124455678999999873
No 321
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.71 E-value=0.021 Score=53.71 Aligned_cols=97 Identities=24% Similarity=0.272 Sum_probs=63.8
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--eeecc------C
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEEIE------L 185 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~~~------~ 185 (379)
.....+|.+||-+|+|. |.++..+|+ .|+..|+++|.++ .++.+++. .. ..+.+...+ ..++. .
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~----~~~~~~~~~~~~~~~~~~v~~~t 248 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CP----EVVTHKVERLSAEESAKKIVESF 248 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CT----TCEEEECCSCCHHHHHHHHHHHT
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-ch----hcccccccccchHHHHHHHHHHh
Confidence 35678899999999875 777888888 5886799999999 98888875 21 223322111 11110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
....+|+|+-. .+ . ...+....+.|++||+++.
T Consensus 249 ~g~g~Dvvid~-~g----~----~~~~~~~~~~l~~~G~iv~ 281 (363)
T 3m6i_A 249 GGIEPAVALEC-TG----V----ESSIAAAIWAVKFGGKVFV 281 (363)
T ss_dssp SSCCCSEEEEC-SC----C----HHHHHHHHHHSCTTCEEEE
T ss_pred CCCCCCEEEEC-CC----C----hHHHHHHHHHhcCCCEEEE
Confidence 23579999853 21 1 2345666789999999884
No 322
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.66 E-value=0.039 Score=52.70 Aligned_cols=97 Identities=20% Similarity=0.141 Sum_probs=61.2
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc------CCCCc
Q 016992 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPVTK 189 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 189 (379)
...+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+-.++. .....
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE----LGAD---HVIDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---EEEcCCCCCHHHHHHHHhCCCC
Confidence 578899999999875 677777777 5877999999999 8888765 3432 22221111110 12246
Q ss_pred eeEEEEecCccccCCh-hhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFE-NMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~-~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+|+-. .+ .. .....++..+.+.++++|+++.
T Consensus 283 ~D~vid~-~g----~~~~~~~~~~~~l~~~~~~~G~iv~ 316 (404)
T 3ip1_A 283 AKLFLEA-TG----VPQLVWPQIEEVIWRARGINATVAI 316 (404)
T ss_dssp CSEEEEC-SS----CHHHHHHHHHHHHHHCSCCCCEEEE
T ss_pred CCEEEEC-CC----CcHHHHHHHHHHHHhccCCCcEEEE
Confidence 9999842 21 11 1233444444456699999884
No 323
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.64 E-value=0.035 Score=51.82 Aligned_cols=89 Identities=21% Similarity=0.141 Sum_probs=61.3
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEE
Q 016992 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIII 194 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv 194 (379)
....+|.+||-+|+|. |.++..+|+ .|+ +|+++|.++ ..+.+++ .|.. .++ .+...+ . ..+|+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~v~-~~~~~~--~-~~~D~vi 239 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVK---HFY-TDPKQC--K-EELDFII 239 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCS---EEE-SSGGGC--C-SCEEEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCC---eec-CCHHHH--h-cCCCEEE
Confidence 3678999999999875 777778888 577 999999999 8887754 4542 122 343322 2 3799998
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
-. .+. . ..+....+.|+++|+++.
T Consensus 240 d~-~g~----~----~~~~~~~~~l~~~G~iv~ 263 (348)
T 3two_A 240 ST-IPT----H----YDLKDYLKLLTYNGDLAL 263 (348)
T ss_dssp EC-CCS----C----CCHHHHHTTEEEEEEEEE
T ss_pred EC-CCc----H----HHHHHHHHHHhcCCEEEE
Confidence 53 221 1 134455689999999884
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.61 E-value=0.018 Score=54.85 Aligned_cols=101 Identities=23% Similarity=0.202 Sum_probs=64.5
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-----cc--CCC
Q 016992 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-----IE--LPV 187 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-----~~--~~~ 187 (379)
....+|.+||-+|+|. |.++..+|+ .|+..|+++|.++ .++.+++ .|. .++...-.+ +. ...
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa----~~i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF----EIADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC----EEEETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC----cEEccCCcchHHHHHHHHhCC
Confidence 4678899999999876 788888888 5877899999999 8888764 454 222211111 10 112
Q ss_pred CceeEEEEecCcccc-------CChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFL-------LFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l-------~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+|+|+-. .+.-. .+.......+....+.|++||+++.
T Consensus 253 ~g~Dvvid~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~ 298 (398)
T 1kol_A 253 PEVDCAVDA-VGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGI 298 (398)
T ss_dssp SCEEEEEEC-CCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEEC-CCCcccccccccccccchHHHHHHHHHHHhcCCEEEE
Confidence 469999853 22110 0111223456677789999999873
No 325
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.45 E-value=0.02 Score=48.70 Aligned_cols=94 Identities=19% Similarity=0.222 Sum_probs=57.7
Q ss_pred HHhccCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|++||..|++ .|.....+++ .|+ +|+++|.++ ..+.+++ .|.. . ++ |..+..
T Consensus 30 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~-~~--d~~~~~~~~~~ 99 (198)
T 1pqw_A 30 LCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE--Y-VG--DSRSVDFADEI 99 (198)
T ss_dssp HHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS--E-EE--ETTCSTHHHHH
T ss_pred HHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC--E-Ee--eCCcHHHHHHH
Confidence 3333467789999999953 3444455554 576 899999998 7766643 3431 1 12 221110
Q ss_pred ---CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 ---LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ---~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... + ...+....+.|+|||+++.
T Consensus 100 ~~~~~~~~~D~vi~~~-g---------~~~~~~~~~~l~~~G~~v~ 135 (198)
T 1pqw_A 100 LELTDGYGVDVVLNSL-A---------GEAIQRGVQILAPGGRFIE 135 (198)
T ss_dssp HHHTTTCCEEEEEECC-C---------THHHHHHHHTEEEEEEEEE
T ss_pred HHHhCCCCCeEEEECC-c---------hHHHHHHHHHhccCCEEEE
Confidence 1124699999542 2 1345667789999999884
No 326
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.44 E-value=0.068 Score=48.91 Aligned_cols=105 Identities=16% Similarity=0.128 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCCchHHHHHH----HcC-CC--EEEEEecHH----------HHHHHHHHHHHcCC--CC--cEEEEEcce
Q 016992 122 KDKVVLDVGAGTGILSLFCA----KAG-AA--HVYAVECSQ----------MANMAKQIVEANGF--SN--VITVLKGKI 180 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la----~~g-~~--~v~~vD~s~----------~~~~a~~~~~~~~~--~~--~i~~~~~d~ 180 (379)
+.-+|||+|=|||...+... +.+ .. +++++|..+ ..+..+........ .. .+.+..+|+
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa 175 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDA 175 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCH
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechH
Confidence 34589999999997554332 222 22 567777521 12223333332210 12 256778888
Q ss_pred eecc--CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 181 EEIE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 181 ~~~~--~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.+.- ++..+||+|+.+.+...-.-+-.-..+++.++++++|||.+.
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~la 223 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWV 223 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEE
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEE
Confidence 6642 334579999988653322211122689999999999999998
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.40 E-value=0.026 Score=51.93 Aligned_cols=89 Identities=21% Similarity=0.168 Sum_probs=59.6
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
......+|.+||-+|+|. |.++..+|+ .|+ +|++++ ++ ..+.+++ .|. -.++. |...+ ...+|+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~----lGa---~~v~~-d~~~v---~~g~Dv 202 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAK----RGV---RHLYR-EPSQV---TQKYFA 202 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHH----HTE---EEEES-SGGGC---CSCEEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHH----cCC---CEEEc-CHHHh---CCCccE
Confidence 456678999999999964 777888888 587 999999 88 8888765 343 12232 43333 478999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+-. .+. . .+....+.|+++|+++.
T Consensus 203 v~d~-~g~-----~----~~~~~~~~l~~~G~~v~ 227 (315)
T 3goh_A 203 IFDA-VNS-----Q----NAAALVPSLKANGHIIC 227 (315)
T ss_dssp EECC-----------------TTGGGEEEEEEEEE
T ss_pred EEEC-CCc-----h----hHHHHHHHhcCCCEEEE
Confidence 9832 211 1 12445689999999874
No 328
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.40 E-value=0.0034 Score=73.27 Aligned_cols=101 Identities=16% Similarity=0.055 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHH-cC-----CCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAK-AG-----AAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDI 192 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~-~g-----~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~ 192 (379)
.+..+||+||.|+|..+..+.+ .+ ..+++..|+|+ ..+.|+++++... +..-..|..+. .+....||+
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANPAPGSLGKADL 1314 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCCCC-----CCE
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccccccccCCCCceeE
Confidence 3567999999999977655544 22 24789999999 8888888776531 33322233221 112367999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
||+..+ ++....+...+.+++++|||||.++..
T Consensus 1315 via~~v---l~~t~~~~~~l~~~~~lL~p~G~l~~~ 1347 (2512)
T 2vz8_A 1315 LVCNCA---LATLGDPAVAVGNMAATLKEGGFLLLH 1347 (2512)
T ss_dssp EEEECC-----------------------CCEEEEE
T ss_pred EEEccc---ccccccHHHHHHHHHHhcCCCcEEEEE
Confidence 997643 444467788899999999999998754
No 329
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.34 E-value=0.0029 Score=58.89 Aligned_cols=62 Identities=15% Similarity=0.120 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
..+|..|||.-||+|..+..+.+.|. +.+|+|+++ .++.+++++...+.. ...++.|+.++.
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i~ 312 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRIL 312 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHHH
Confidence 36889999999999999999888875 999999999 999999988766542 444555555543
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.33 E-value=0.038 Score=52.23 Aligned_cols=98 Identities=22% Similarity=0.236 Sum_probs=64.3
Q ss_pred HHhccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--eeec-----
Q 016992 114 IYQNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEEI----- 183 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~~----- 183 (379)
+.......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++... -.++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~ 257 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIV 257 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHH
Confidence 33445678899999999974 777778887 5887999999999 8887764 4542 122211 1111
Q ss_pred cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCC-EEEEe
Q 016992 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 184 ~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (379)
....+.+|+|+-. .+ . ...+....+.|++| |+++.
T Consensus 258 ~~~~gg~D~vid~-~g-------~-~~~~~~~~~~l~~g~G~iv~ 293 (378)
T 3uko_A 258 DLTDGGVDYSFEC-IG-------N-VSVMRAALECCHKGWGTSVI 293 (378)
T ss_dssp HHTTSCBSEEEEC-SC-------C-HHHHHHHHHTBCTTTCEEEE
T ss_pred HhcCCCCCEEEEC-CC-------C-HHHHHHHHHHhhccCCEEEE
Confidence 0112479999843 21 1 24566677899996 98873
No 331
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.28 E-value=0.022 Score=55.67 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=57.5
Q ss_pred CCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC---------------
Q 016992 123 DKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP--------------- 186 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~--------------- 186 (379)
..+++|+-||.|++++.+.++|...|.++|+++ +++.-+.++... ....++++|+.++...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~---p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD---PATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC---TTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC---CCcceeccchhhhhhccccccchhhHHhhhh
Confidence 358999999999999999888887899999999 777666654211 1235677888776421
Q ss_pred --CCceeEEEEecCccccC
Q 016992 187 --VTKVDIIISEWMGYFLL 203 (379)
Q Consensus 187 --~~~~D~Iv~~~~~~~l~ 203 (379)
...+|+|+..++|..+.
T Consensus 165 ~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHSCCCSEEEEECCCCCC-
T ss_pred hcCCCCCEEEecCCCcchh
Confidence 14689999988776554
No 332
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.19 E-value=0.024 Score=53.48 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=62.7
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce--eecc-----C
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--EEIE-----L 185 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~-----~ 185 (379)
......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+- .++. .
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~ 257 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT---ECLNPKDYDKPIYEVICEK 257 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc---EEEecccccchHHHHHHHH
Confidence 345678899999999875 677777777 5877999999998 8877754 4542 1222110 1110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCC-EEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (379)
..+.+|+|+-. .+. ...+....+.|+++ |+++.
T Consensus 258 t~gg~Dvvid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 258 TNGGVDYAVEC-AGR--------IETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp TTSCBSEEEEC-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCCCEEEEC-CCC--------HHHHHHHHHHHhcCCCEEEE
Confidence 12479999843 211 23456677899999 99873
No 333
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.15 E-value=0.027 Score=53.14 Aligned_cols=96 Identities=19% Similarity=0.213 Sum_probs=62.3
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce--eecc-----C
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--EEIE-----L 185 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~-----~ 185 (379)
......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++...- .++. .
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~ 258 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT---DFVNPNDHSEPISQVLSKM 258 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc---eEEeccccchhHHHHHHHH
Confidence 345678899999999875 677777777 5777999999998 8887754 4542 1221110 1110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCC-EEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (379)
..+.+|+|+-. .+. ...+....+.|+++ |+++.
T Consensus 259 ~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 259 TNGGVDFSLEC-VGN--------VGVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp HTSCBSEEEEC-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCCCEEEEC-CCC--------HHHHHHHHHHhhcCCcEEEE
Confidence 12479999853 211 23466677899999 99874
No 334
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.01 E-value=0.092 Score=49.42 Aligned_cols=96 Identities=21% Similarity=0.235 Sum_probs=62.3
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce--eecc-----C
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--EEIE-----L 185 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~-----~ 185 (379)
......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++...- .++. .
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~v~~~ 256 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE----FGAT---ECINPQDFSKPIQEVLIEM 256 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----HTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---eEeccccccccHHHHHHHH
Confidence 345678899999999875 677777777 5877999999998 8887764 3442 1221110 1110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCC-EEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (379)
..+.+|+|+-. .+. ...+....+.|+++ |+++.
T Consensus 257 ~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 257 TDGGVDYSFEC-IGN--------VKVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp TTSCBSEEEEC-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCCCEEEEC-CCc--------HHHHHHHHHhhccCCcEEEE
Confidence 12479999843 211 23456677899999 99873
No 335
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.00 E-value=0.031 Score=52.86 Aligned_cols=96 Identities=21% Similarity=0.222 Sum_probs=62.2
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce--eecc-----C
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--EEIE-----L 185 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~-----~ 185 (379)
......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+- .++. .
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~v~~~ 261 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT---DCLNPRELDKPVQDVITEL 261 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---EEEccccccchHHHHHHHH
Confidence 345678899999999874 677777777 5777999999998 8777754 4542 1221110 1110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCC-EEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (379)
..+.+|+|+-. .+. ...+....+.|+++ |+++.
T Consensus 262 ~~~g~Dvvid~-~G~--------~~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 262 TAGGVDYSLDC-AGT--------AQTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp HTSCBSEEEES-SCC--------HHHHHHHHHTBCTTTCEEEE
T ss_pred hCCCccEEEEC-CCC--------HHHHHHHHHHhhcCCCEEEE
Confidence 12479999842 211 24566677899999 99874
No 336
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.00 E-value=0.036 Score=52.35 Aligned_cols=92 Identities=25% Similarity=0.224 Sum_probs=59.6
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-c-cCCCCceeE
Q 016992 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-I-ELPVTKVDI 192 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-~~~~~~~D~ 192 (379)
....+|.+||.+|+|. |.++..+|+ .|+ +|+++|.++ .++.+++ .|.. .++...-.+ . ... ..+|+
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~-~g~Dv 260 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAHL-KSFDF 260 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTTT-TCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHhh-cCCCE
Confidence 3577899999999975 777777887 576 799999998 8887765 3432 222211111 1 112 57999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+-. .+. . ..+....+.|+++|.++.
T Consensus 261 vid~-~g~----~----~~~~~~~~~l~~~G~iv~ 286 (369)
T 1uuf_A 261 ILNT-VAA----P----HNLDDFTTLLKRDGTMTL 286 (369)
T ss_dssp EEEC-CSS----C----CCHHHHHTTEEEEEEEEE
T ss_pred EEEC-CCC----H----HHHHHHHHHhccCCEEEE
Confidence 9853 221 1 123455688999999873
No 337
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.98 E-value=0.04 Score=51.36 Aligned_cols=93 Identities=17% Similarity=0.239 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--eee-cc--CCCCce
Q 016992 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEE-IE--LPVTKV 190 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~-~~--~~~~~~ 190 (379)
...+|.+||-+|+|. |.++..+|+ .|..+|+++|.++ .++.+++ .|... ++..+ ..+ +. .....+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~---~i~~~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADA---AVKSGAGAADAIRELTGGQGA 240 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSE---EEECSTTHHHHHHHHHGGGCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCE---EEcCCCcHHHHHHHHhCCCCC
Confidence 568899999999975 777888887 5667999999999 8887764 45421 22211 100 00 112379
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|+-. .+ . ...+....+.|+++|+++.
T Consensus 241 d~v~d~-~G----~----~~~~~~~~~~l~~~G~iv~ 268 (345)
T 3jv7_A 241 TAVFDF-VG----A----QSTIDTAQQVVAVDGHISV 268 (345)
T ss_dssp EEEEES-SC----C----HHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEC-CC----C----HHHHHHHHHHHhcCCEEEE
Confidence 999843 21 1 2356667789999999884
No 338
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.85 E-value=0.095 Score=48.65 Aligned_cols=96 Identities=17% Similarity=0.076 Sum_probs=60.7
Q ss_pred HHhccCCCCCCEEEEEcCCC--chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGAGT--GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG~--G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|.+||-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++ .|.. .++...-.++.
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lga~---~~~~~~~~~~~~~~~~ 207 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR----LGAA---YVIDTSTAPLYETVME 207 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH----HTCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----CCCc---EEEeCCcccHHHHHHH
Confidence 33446678999999999974 677777777 577 999999998 8888765 3432 12221111110
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. . .. ....+.|+++|.++.
T Consensus 208 ~~~~~g~Dvvid~~-g~-----~---~~-~~~~~~l~~~G~iv~ 241 (340)
T 3gms_A 208 LTNGIGADAAIDSI-GG-----P---DG-NELAFSLRPNGHFLT 241 (340)
T ss_dssp HTTTSCEEEEEESS-CH-----H---HH-HHHHHTEEEEEEEEE
T ss_pred HhCCCCCcEEEECC-CC-----h---hH-HHHHHHhcCCCEEEE
Confidence 1224799998532 11 1 12 223378999999884
No 339
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.84 E-value=0.041 Score=51.77 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=59.5
Q ss_pred CCCEEEEEc-CCC-chHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc--cee-ec-cCCCCceeEE
Q 016992 122 KDKVVLDVG-AGT-GILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG--KIE-EI-ELPVTKVDII 193 (379)
Q Consensus 122 ~~~~VLDlG-cG~-G~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~--d~~-~~-~~~~~~~D~I 193 (379)
+|.+||-+| +|. |.++..+|+. +..+|+++|.++ .++.+++ .|.. .++.. +.. .+ ....+.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHHHHHHhcCCCceEE
Confidence 788999998 554 7888888885 666999999998 8887764 4542 12211 110 01 1123579988
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+-. .+ -...+....+.|+++|+++.
T Consensus 244 id~-~g--------~~~~~~~~~~~l~~~G~iv~ 268 (363)
T 4dvj_A 244 FST-TH--------TDKHAAEIADLIAPQGRFCL 268 (363)
T ss_dssp EEC-SC--------HHHHHHHHHHHSCTTCEEEE
T ss_pred EEC-CC--------chhhHHHHHHHhcCCCEEEE
Confidence 842 11 12456677789999999884
No 340
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.81 E-value=0.048 Score=50.96 Aligned_cols=94 Identities=23% Similarity=0.215 Sum_probs=60.2
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc----ee-ecc--CC
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK----IE-EIE--LP 186 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d----~~-~~~--~~ 186 (379)
.....+|.+||-+|+|. |.++..+++ .|+ +|+++|.++ .++.+++ .|.. .++..+ .. .+. ..
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~ 234 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIR 234 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhc
Confidence 34578899999999875 677777777 576 599999998 8777753 4542 122211 10 110 00
Q ss_pred ---CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 ---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ---~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+|+|+-.. + . ...+....+.|+++|+++.
T Consensus 235 ~~~g~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 269 (352)
T 1e3j_A 235 SAIGDLPNVTIDCS-G----N----EKCITIGINITRTGGTLML 269 (352)
T ss_dssp HHSSSCCSEEEECS-C----C----HHHHHHHHHHSCTTCEEEE
T ss_pred cccCCCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 24699998532 1 1 2345666788999999883
No 341
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.77 E-value=0.097 Score=49.31 Aligned_cols=96 Identities=18% Similarity=0.228 Sum_probs=61.9
Q ss_pred hccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce--eecc-----C
Q 016992 116 QNKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI--EEIE-----L 185 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~--~~~~-----~ 185 (379)
......+|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++ .|.. .++..+- .++. .
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~ 257 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT---ECVNPQDYKKPIQEVLTEM 257 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS---EEECGGGCSSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc---eEecccccchhHHHHHHHH
Confidence 345678899999999875 677777777 5777899999998 8877753 4542 1221110 1110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCC-EEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDD-GIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~lip 227 (379)
..+.+|+|+-. .+. ...+....+.|+++ |+++.
T Consensus 258 ~~~g~D~vid~-~g~--------~~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 258 SNGGVDFSFEV-IGR--------LDTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp TTSCBSEEEEC-SCC--------HHHHHHHHHHBCTTTCEEEE
T ss_pred hCCCCcEEEEC-CCC--------HHHHHHHHHHhhcCCcEEEE
Confidence 12479999843 211 23456667889999 99873
No 342
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.62 E-value=0.038 Score=51.16 Aligned_cols=97 Identities=20% Similarity=0.115 Sum_probs=59.1
Q ss_pred HHhccCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|++||..|++ .|..+..+++ .|+ +|+++|.++ .++.+++ .|.. ..+-..+..++.
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~ 209 (333)
T 1v3u_A 137 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKK 209 (333)
T ss_dssp HHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHH
T ss_pred HHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHH
Confidence 3344567889999999983 4555555555 576 999999988 7776633 3431 112111101110
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+.+|+++... + . ..+....+.|++||+++.
T Consensus 210 ~~~~~~d~vi~~~-g-------~--~~~~~~~~~l~~~G~~v~ 242 (333)
T 1v3u_A 210 ASPDGYDCYFDNV-G-------G--EFLNTVLSQMKDFGKIAI 242 (333)
T ss_dssp HCTTCEEEEEESS-C-------H--HHHHHHHTTEEEEEEEEE
T ss_pred HhCCCCeEEEECC-C-------h--HHHHHHHHHHhcCCEEEE
Confidence 1124799998642 1 1 235667789999999874
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=94.58 E-value=0.081 Score=49.00 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=61.8
Q ss_pred HHHhccCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----
Q 016992 113 VIYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---- 184 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 184 (379)
++.......+|++||-.|++ .|..+..+++ .|+ +|++++.++ .++.+.+ ..|.. .++...-.++.
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~---~~g~~---~~~~~~~~~~~~~~~ 212 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVE---ELGFD---GAIDYKNEDLAAGLK 212 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TTCCS---EEEETTTSCHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCCC---EEEECCCHHHHHHHH
Confidence 34344667899999999983 4667777776 577 999999988 7776622 23432 12211111110
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+.+|+|+... + . ..+....+.|+++|+++.
T Consensus 213 ~~~~~~~d~vi~~~-g-------~--~~~~~~~~~l~~~G~iv~ 246 (336)
T 4b7c_A 213 RECPKGIDVFFDNV-G-------G--EILDTVLTRIAFKARIVL 246 (336)
T ss_dssp HHCTTCEEEEEESS-C-------H--HHHHHHHTTEEEEEEEEE
T ss_pred HhcCCCceEEEECC-C-------c--chHHHHHHHHhhCCEEEE
Confidence 1125799998532 1 1 356677789999999883
No 344
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.58 E-value=0.029 Score=51.31 Aligned_cols=60 Identities=22% Similarity=0.301 Sum_probs=42.4
Q ss_pred CcEEEEEcceeec-c-CCCCceeEEEEecCccccCC---------------h---hhHHHHHHHHHhcccCCEEEEecCC
Q 016992 171 NVITVLKGKIEEI-E-LPVTKVDIIISEWMGYFLLF---------------E---NMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 171 ~~i~~~~~d~~~~-~-~~~~~~D~Iv~~~~~~~l~~---------------~---~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
.+++++++|+.+. . +++++||+|+++++ |.... + ..+..++.++.++|||||.++....
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPP-Y~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPP-YWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCC-CCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCC-CCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 4578999999884 2 45689999999975 43211 0 1234677889999999999876544
Q ss_pred c
Q 016992 231 S 231 (379)
Q Consensus 231 ~ 231 (379)
.
T Consensus 99 d 99 (297)
T 2zig_A 99 D 99 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 345
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.56 E-value=0.059 Score=50.09 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=61.4
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc---CCCCce
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKV 190 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~ 190 (379)
.....+|.+||-.|+|. |.++..+++ .|+..++++|.++ .++.+++ .|....+.....|..+.. .....+
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~~~g~ 230 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRELRFN 230 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGGGCSS
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcccCCc
Confidence 35568899999999975 566777777 6888899999999 8887764 454221111111111110 112457
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|+.. .+ ....+....++|++||.++.
T Consensus 231 d~v~d~-~G--------~~~~~~~~~~~l~~~G~~v~ 258 (346)
T 4a2c_A 231 QLILET-AG--------VPQTVELAVEIAGPHAQLAL 258 (346)
T ss_dssp EEEEEC-SC--------SHHHHHHHHHHCCTTCEEEE
T ss_pred cccccc-cc--------ccchhhhhhheecCCeEEEE
Confidence 887742 21 13455666788999999873
No 346
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.51 E-value=0.1 Score=48.07 Aligned_cols=96 Identities=21% Similarity=0.194 Sum_probs=60.9
Q ss_pred HHhccCCCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|++||-.|+ | .|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+-.++.
T Consensus 132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKA----LGAW---ETIDYSHEDVAKRVLE 203 (325)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC---EEEeCCCccHHHHHHH
Confidence 334456788999999993 3 4677777777 577 999999998 8887764 3432 12221111110
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. ..+....+.|+++|+++.
T Consensus 204 ~~~~~g~Dvvid~~-g~---------~~~~~~~~~l~~~G~iv~ 237 (325)
T 3jyn_A 204 LTDGKKCPVVYDGV-GQ---------DTWLTSLDSVAPRGLVVS 237 (325)
T ss_dssp HTTTCCEEEEEESS-CG---------GGHHHHHTTEEEEEEEEE
T ss_pred HhCCCCceEEEECC-Ch---------HHHHHHHHHhcCCCEEEE
Confidence 1224799998532 21 234556689999999884
No 347
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.1 Score=49.28 Aligned_cols=94 Identities=24% Similarity=0.311 Sum_probs=60.5
Q ss_pred cC-CCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc---eeec----c--
Q 016992 118 KF-LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK---IEEI----E-- 184 (379)
Q Consensus 118 ~~-~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d---~~~~----~-- 184 (379)
.. ..+|.+||-+|+|. |.++..+|+ .|+.+|++++.++ .++.+++ .|.. .++..+ -.++ .
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~ 262 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDI 262 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHH
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHH
Confidence 45 77899999999764 677777777 5756999999998 8777763 4542 223221 1111 0
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+-. .+. ...+....+.|+++|+++.
T Consensus 263 ~~g~g~Dvvid~-~g~--------~~~~~~~~~~l~~~G~iv~ 296 (380)
T 1vj0_A 263 THGRGADFILEA-TGD--------SRALLEGSELLRRGGFYSV 296 (380)
T ss_dssp TTTSCEEEEEEC-SSC--------TTHHHHHHHHEEEEEEEEE
T ss_pred hCCCCCcEEEEC-CCC--------HHHHHHHHHHHhcCCEEEE
Confidence 122369999853 211 1234556688999999873
No 348
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.45 E-value=0.12 Score=48.02 Aligned_cols=94 Identities=28% Similarity=0.260 Sum_probs=60.0
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc------CCC
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPV 187 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~ 187 (379)
.... +|.+||-+|+|. |.++..+++ .|+.+|+++|.++ .++.+++ .|. + .++..+-.++. ...
T Consensus 163 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~Ga-~--~~~~~~~~~~~~~v~~~~~g 234 (348)
T 2d8a_A 163 AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----VGA-D--YVINPFEEDVVKEVMDITDG 234 (348)
T ss_dssp TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----HTC-S--EEECTTTSCHHHHHHHHTTT
T ss_pred hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCC-C--EEECCCCcCHHHHHHHHcCC
Confidence 3456 899999999964 666777777 5766899999998 8777764 343 1 12221111110 112
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+|+|+... + . ...+....+.|+++|+++.
T Consensus 235 ~g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 265 (348)
T 2d8a_A 235 NGVDVFLEFS-G----A----PKALEQGLQAVTPAGRVSL 265 (348)
T ss_dssp SCEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 4699998532 1 1 2345666788999999873
No 349
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.40 E-value=0.1 Score=48.33 Aligned_cols=95 Identities=22% Similarity=0.216 Sum_probs=60.0
Q ss_pred HhccCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc------
Q 016992 115 YQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------ 184 (379)
Q Consensus 115 ~~~~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------ 184 (379)
.......+|++||-+|++ .|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+-.++.
T Consensus 141 ~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~ 212 (334)
T 3qwb_A 141 NEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE----YGAE---YLINASKEDILRQVLKF 212 (334)
T ss_dssp HTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHH
T ss_pred HHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCc---EEEeCCCchHHHHHHHH
Confidence 333467899999999942 3666777777 576 999999988 8777654 3432 12221111110
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. ..+....+.|++||.++.
T Consensus 213 ~~~~g~D~vid~~-g~---------~~~~~~~~~l~~~G~iv~ 245 (334)
T 3qwb_A 213 TNGKGVDASFDSV-GK---------DTFEISLAALKRKGVFVS 245 (334)
T ss_dssp TTTSCEEEEEECC-GG---------GGHHHHHHHEEEEEEEEE
T ss_pred hCCCCceEEEECC-Ch---------HHHHHHHHHhccCCEEEE
Confidence 1135799998532 21 234556678999999884
No 350
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.35 E-value=0.032 Score=52.01 Aligned_cols=90 Identities=19% Similarity=0.248 Sum_probs=59.2
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHH-c--CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc----c-eeeccCCCC
Q 016992 119 FLFKDKVVLDVGAGT-GILSLFCAK-A--GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG----K-IEEIELPVT 188 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~~~~~la~-~--g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~----d-~~~~~~~~~ 188 (379)
.. +|.+||-+|+|. |.++..+|+ . |+ +|+++|.++ .++.+++ .|. + .++.. + ...+. ...
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~----lGa-~--~vi~~~~~~~~~~~~~-~g~ 237 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE----LGA-D--YVSEMKDAESLINKLT-DGL 237 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH----HTC-S--EEECHHHHHHHHHHHH-TTC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH----hCC-C--EEeccccchHHHHHhh-cCC
Confidence 56 899999999975 677777887 5 76 899999998 8887765 343 2 12211 1 11111 123
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+|+|+-.. + . ...+....+.|+++|.++.
T Consensus 238 g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 267 (344)
T 2h6e_A 238 GASIAIDLV-G----T----EETTYNLGKLLAQEGAIIL 267 (344)
T ss_dssp CEEEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CccEEEECC-C----C----hHHHHHHHHHhhcCCEEEE
Confidence 799998532 1 1 2345666788999999873
No 351
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.33 E-value=0.15 Score=47.34 Aligned_cols=98 Identities=21% Similarity=0.050 Sum_probs=60.1
Q ss_pred cCCCCCCEEEEEcCCCc-hHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-cc--CCCCcee
Q 016992 118 KFLFKDKVVLDVGAGTG-ILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IE--LPVTKVD 191 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~G-~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~--~~~~~~D 191 (379)
....+|.+||-+|+|.+ .++..+++ .+..+|+++|.++ .++.+++ .|....+.....|..+ +. .....+|
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t~g~g~d 234 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKITGGLGVQ 234 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHTTSSCEE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhcCCCCce
Confidence 45688999999999874 55555555 5677999999998 7776654 4442212222222111 00 1224577
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
+++.... -...+....+.|+++|.++..
T Consensus 235 ~~~~~~~---------~~~~~~~~~~~l~~~G~~v~~ 262 (348)
T 4eez_A 235 SAIVCAV---------ARIAFEQAVASLKPMGKMVAV 262 (348)
T ss_dssp EEEECCS---------CHHHHHHHHHTEEEEEEEEEC
T ss_pred EEEEecc---------CcchhheeheeecCCceEEEE
Confidence 7774321 134556667899999998743
No 352
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.25 E-value=0.028 Score=51.33 Aligned_cols=89 Identities=15% Similarity=0.057 Sum_probs=57.4
Q ss_pred CCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce-eeccCCCCceeEEE
Q 016992 120 LFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI-EEIELPVTKVDIII 194 (379)
Q Consensus 120 ~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~Iv 194 (379)
..+|.+||-+|+ |.|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+- .++...-..+|+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHhcCceEEE
Confidence 788999999998 34677777777 576 999999988 7777654 4432 1222111 11110015699998
Q ss_pred EecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 195 SEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 195 ~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
. . +. ..+....+.|+++|+++.
T Consensus 195 d-~-g~---------~~~~~~~~~l~~~G~~v~ 216 (302)
T 1iz0_A 195 E-V-RG---------KEVEESLGLLAHGGRLVY 216 (302)
T ss_dssp E-C-SC---------TTHHHHHTTEEEEEEEEE
T ss_pred E-C-CH---------HHHHHHHHhhccCCEEEE
Confidence 5 3 21 134566689999999873
No 353
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=94.15 E-value=0.11 Score=48.37 Aligned_cols=96 Identities=26% Similarity=0.266 Sum_probs=62.0
Q ss_pred HHHhccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----
Q 016992 113 VIYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---- 184 (379)
Q Consensus 113 ~i~~~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---- 184 (379)
++.......+|.+||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+ .++.
T Consensus 150 ~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~v~~~~-~~~~~~v~ 220 (342)
T 4eye_A 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKS----VGAD---IVLPLE-EGWAKAVR 220 (342)
T ss_dssp HHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----HTCS---EEEESS-TTHHHHHH
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCc---EEecCc-hhHHHHHH
Confidence 3434456788999999997 34677777777 577 999999988 8777765 3432 222222 2111
Q ss_pred --CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 --LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 --~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. ..+....+.|+++|.++.
T Consensus 221 ~~~~~~g~Dvvid~~-g~---------~~~~~~~~~l~~~G~iv~ 255 (342)
T 4eye_A 221 EATGGAGVDMVVDPI-GG---------PAFDDAVRTLASEGRLLV 255 (342)
T ss_dssp HHTTTSCEEEEEESC-C-----------CHHHHHHTEEEEEEEEE
T ss_pred HHhCCCCceEEEECC-ch---------hHHHHHHHhhcCCCEEEE
Confidence 1224799998532 21 135566689999999884
No 354
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.14 E-value=0.073 Score=54.59 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHc----------C---CCEEEEEecHH-HHHHHHH--------------HHHHc-----C
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA----------G---AAHVYAVECSQ-MANMAKQ--------------IVEAN-----G 168 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~----------g---~~~v~~vD~s~-~~~~a~~--------------~~~~~-----~ 168 (379)
+.-+|+|+|-|+|...+.+.+. . .-+++++|..+ ..+.+++ .+... |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 4469999999999776665442 1 14799999855 4443333 22221 1
Q ss_pred -----CC---CcEEEEEcceeecc--CC---CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 169 -----FS---NVITVLKGKIEEIE--LP---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 169 -----~~---~~i~~~~~d~~~~~--~~---~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
+. -.++++.+|+.+.- +. ...+|.++.+.+......+-....++..+.++++|||.+....
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 11 14677888886542 21 3689999987643222111123678899999999999987543
No 355
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=94.13 E-value=0.12 Score=47.96 Aligned_cols=92 Identities=20% Similarity=0.103 Sum_probs=58.9
Q ss_pred cCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec----c--CCC
Q 016992 118 KFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E--LPV 187 (379)
Q Consensus 118 ~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~--~~~ 187 (379)
....++.+||..|+ |.|..+..+++ .|+ +|++++.++ .++.+++ .|. + .++...-.++ . ...
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~----~ga-~--~~~d~~~~~~~~~~~~~~~~ 233 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKA----LGA-D--ETVNYTHPDWPKEVRRLTGG 233 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTC-S--EEEETTSTTHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCC-C--EEEcCCcccHHHHHHHHhCC
Confidence 45678999999998 45777777777 576 999999988 8877754 343 2 1222111111 0 112
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+|+|+... + . ..+....+.|+++|+++.
T Consensus 234 ~~~d~vi~~~-g----~-----~~~~~~~~~l~~~G~~v~ 263 (343)
T 2eih_A 234 KGADKVVDHT-G----A-----LYFEGVIKATANGGRIAI 263 (343)
T ss_dssp TCEEEEEESS-C----S-----SSHHHHHHHEEEEEEEEE
T ss_pred CCceEEEECC-C----H-----HHHHHHHHhhccCCEEEE
Confidence 4799998542 2 1 134555678999999873
No 356
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.05 E-value=0.066 Score=50.28 Aligned_cols=93 Identities=24% Similarity=0.217 Sum_probs=60.2
Q ss_pred ccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----CCC
Q 016992 117 NKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPV 187 (379)
Q Consensus 117 ~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~ 187 (379)
.....+|.+||-.|+ |.|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+-.++. ...
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~ 229 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEYP 229 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHCT
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhcC
Confidence 345678999999993 45777888887 577 899999998 7777764 4442 12221111110 112
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+|+|+... + . ..+....+.|+++|.++.
T Consensus 230 ~g~D~vid~~-g------~---~~~~~~~~~l~~~G~iv~ 259 (362)
T 2c0c_A 230 EGVDVVYESV-G------G---AMFDLAVDALATKGRLIV 259 (362)
T ss_dssp TCEEEEEECS-C------T---HHHHHHHHHEEEEEEEEE
T ss_pred CCCCEEEECC-C------H---HHHHHHHHHHhcCCEEEE
Confidence 4699998532 2 1 345666788999999873
No 357
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.94 E-value=0.072 Score=49.65 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=56.8
Q ss_pred CCCEEEEEc-CCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcc--eee-c-cCCCCceeEE
Q 016992 122 KDKVVLDVG-AGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGK--IEE-I-ELPVTKVDII 193 (379)
Q Consensus 122 ~~~~VLDlG-cG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d--~~~-~-~~~~~~~D~I 193 (379)
+|.+||-+| +|. |.++..+++ .|+ +|++++.++ .++.+++ .|.. .++..+ ..+ + ......+|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKK----MGAD---IVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHH----HTCS---EEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCc---EEEECCccHHHHHHHhCCCCccEE
Confidence 899999994 443 677777777 577 999999988 8888775 3432 122111 100 0 0123579999
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.. .+ -...+....+.|+++|.++.
T Consensus 222 ~d~-~g--------~~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 222 FCT-FN--------TDMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EES-SC--------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEC-CC--------chHHHHHHHHHhccCCEEEE
Confidence 852 11 13455667788999999873
No 358
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.83 E-value=0.13 Score=47.72 Aligned_cols=98 Identities=18% Similarity=0.078 Sum_probs=60.5
Q ss_pred HHhccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|++||..|+ |.|..+..+++ .|+ +|++++.++ .++.+++ ..|.. ..+-..+..++.
T Consensus 147 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~---~~g~~--~~~d~~~~~~~~~~~~~ 220 (345)
T 2j3h_A 147 FYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKT---KFGFD--DAFNYKEESDLTAALKR 220 (345)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH---TSCCS--EEEETTSCSCSHHHHHH
T ss_pred HHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---HcCCc--eEEecCCHHHHHHHHHH
Confidence 334456788999999997 34666666666 576 999999988 7777653 23432 111111111110
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. ..+....+.|++||+++.
T Consensus 221 ~~~~~~d~vi~~~--------g~--~~~~~~~~~l~~~G~~v~ 253 (345)
T 2j3h_A 221 CFPNGIDIYFENV--------GG--KMLDAVLVNMNMHGRIAV 253 (345)
T ss_dssp HCTTCEEEEEESS--------CH--HHHHHHHTTEEEEEEEEE
T ss_pred HhCCCCcEEEECC--------CH--HHHHHHHHHHhcCCEEEE
Confidence 1124699998542 11 256677789999999873
No 359
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.59 E-value=0.18 Score=46.38 Aligned_cols=93 Identities=20% Similarity=0.208 Sum_probs=57.7
Q ss_pred ccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec----c--CC
Q 016992 117 NKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E--LP 186 (379)
Q Consensus 117 ~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~--~~ 186 (379)
.....++++||-.|+ |.|..+..+++ .|+ +|+++|.++ .++.+++ .|.. . ++..+-.+. . ..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~-~~~~~~~~~~~~~~~~~~ 206 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALK----AGAW--Q-VINYREEDLVERLKEITG 206 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH----HTCS--E-EEETTTSCHHHHHHHHTT
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC--E-EEECCCccHHHHHHHHhC
Confidence 456778999999994 34555555555 576 999999998 8777765 2431 1 221111111 0 11
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+|+|+... + ...+....+.|+++|+++.
T Consensus 207 ~~~~D~vi~~~-g---------~~~~~~~~~~l~~~G~iv~ 237 (327)
T 1qor_A 207 GKKVRVVYDSV-G---------RDTWERSLDCLQRRGLMVS 237 (327)
T ss_dssp TCCEEEEEECS-C---------GGGHHHHHHTEEEEEEEEE
T ss_pred CCCceEEEECC-c---------hHHHHHHHHHhcCCCEEEE
Confidence 24699998642 2 1235566688999999873
No 360
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.53 E-value=0.013 Score=54.81 Aligned_cols=93 Identities=16% Similarity=0.232 Sum_probs=58.7
Q ss_pred ccCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----CCCC
Q 016992 117 NKFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVT 188 (379)
Q Consensus 117 ~~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~ 188 (379)
.... +|.+||-+|+|. |.++..+|+ .|+.+|+++|.++ .++.+++. . + .++..+-.++. ....
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~~~ 230 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVTGS 230 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHHSS
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhcCC
Confidence 4456 899999999864 667777777 5766899999998 77776542 1 2 11211111110 0024
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+|+|+... + . ...+....+.|+++|+++.
T Consensus 231 g~D~vid~~-g----~----~~~~~~~~~~l~~~G~iv~ 260 (343)
T 2dq4_A 231 GVEVLLEFS-G----N----EAAIHQGLMALIPGGEARI 260 (343)
T ss_dssp CEEEEEECS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEECC-C----C----HHHHHHHHHHHhcCCEEEE
Confidence 699998532 1 1 2345666788999999873
No 361
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=93.53 E-value=0.12 Score=48.53 Aligned_cols=94 Identities=19% Similarity=0.144 Sum_probs=59.1
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEccee-ec--cCCCCcee
Q 016992 118 KFLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIE-EI--ELPVTKVD 191 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~-~~--~~~~~~~D 191 (379)
....+|.+||-+|+|. |.++..+|+ .|+ +|+++|.++ .++.+++ .|. + .++..+-. ++ .+. +.+|
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~----lGa-~--~v~~~~~~~~~~~~~~-~~~D 245 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMK----MGA-D--HYIATLEEGDWGEKYF-DTFD 245 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH----HTC-S--EEEEGGGTSCHHHHSC-SCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH----cCC-C--EEEcCcCchHHHHHhh-cCCC
Confidence 4677899999999864 677777777 577 799999998 8887765 343 2 22221111 11 112 5799
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+... +.. . ...+....+.|++||+++.
T Consensus 246 ~vid~~-g~~--~----~~~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 246 LIVVCA-SSL--T----DIDFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp EEEECC-SCS--T----TCCTTTGGGGEEEEEEEEE
T ss_pred EEEECC-CCC--c----HHHHHHHHHHhcCCCEEEE
Confidence 998532 210 0 0123344578999999873
No 362
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.51 E-value=0.26 Score=47.81 Aligned_cols=95 Identities=21% Similarity=0.167 Sum_probs=59.6
Q ss_pred cCCCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce-------------
Q 016992 118 KFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI------------- 180 (379)
Q Consensus 118 ~~~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~------------- 180 (379)
....+|.+||-+|+ | .|.++..+|+ .|+ +|++++.++ .++.+++ .|....+.....|.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHH
Confidence 45688999999997 4 4777888888 566 888998888 8887754 34421111111111
Q ss_pred -----eecc--CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 181 -----EEIE--LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 181 -----~~~~--~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+. .....+|+|+-. .+ . ..+....++|++||.++.
T Consensus 299 ~~~~~~~i~~~t~g~g~Dvvid~-~G-------~--~~~~~~~~~l~~~G~iv~ 342 (456)
T 3krt_A 299 WKRFGKRIRELTGGEDIDIVFEH-PG-------R--ETFGASVFVTRKGGTITT 342 (456)
T ss_dssp HHHHHHHHHHHHTSCCEEEEEEC-SC-------H--HHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCCCcEEEEc-CC-------c--hhHHHHHHHhhCCcEEEE
Confidence 0000 112579998843 21 1 345666789999999884
No 363
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.46 E-value=0.083 Score=48.90 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=43.8
Q ss_pred CcEEEEEcceeec-c-CCCCceeEEEEecCccccCC------------hhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 171 NVITVLKGKIEEI-E-LPVTKVDIIISEWMGYFLLF------------ENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 171 ~~i~~~~~d~~~~-~-~~~~~~D~Iv~~~~~~~l~~------------~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
....++++|+.+. . +++++||+|+++++ |.... ...+...+.++.++|+|||.++....
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPP-Y~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPP-FALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCC-CSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCC-CCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 4578999998763 3 55689999999975 54331 12567888899999999999885433
No 364
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.36 E-value=0.094 Score=48.71 Aligned_cols=91 Identities=19% Similarity=0.115 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----CCCCce
Q 016992 119 FLFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKV 190 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~ 190 (379)
...+|.+||-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++ .|.. .++...-.++. .. ..+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~~-~~~ 231 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEKV-GGV 231 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHHH-SSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHHh-CCC
Confidence 567899999999964 677777777 576 999999998 8777753 4542 12211101110 01 469
Q ss_pred eEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+|+... + . ...+....+.|+++|+++.
T Consensus 232 d~vid~~-g----~----~~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 232 HAAVVTA-V----S----KPAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp EEEEESS-C----C----HHHHHHHHHHEEEEEEEEE
T ss_pred CEEEECC-C----C----HHHHHHHHHHhhcCCEEEE
Confidence 9998532 1 1 2345666788999999873
No 365
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=93.28 E-value=0.38 Score=44.08 Aligned_cols=94 Identities=23% Similarity=0.240 Sum_probs=58.2
Q ss_pred hccCCCCCCEEEEEc-CCC-chHHHHHHH-cCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceee-ccCCCCcee
Q 016992 116 QNKFLFKDKVVLDVG-AGT-GILSLFCAK-AGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEE-IELPVTKVD 191 (379)
Q Consensus 116 ~~~~~~~~~~VLDlG-cG~-G~~~~~la~-~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D 191 (379)
......+|.+||-+| +|. |.++..+++ .|+ +|++++.++..+.++ +.|... ++..+-.+ +......+|
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~~~~~~~~~~----~lGa~~---~i~~~~~~~~~~~~~g~D 217 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTASKRNHAFLK----ALGAEQ---CINYHEEDFLLAISTPVD 217 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEECHHHHHHHH----HHTCSE---EEETTTSCHHHHCCSCEE
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeccchHHHHH----HcCCCE---EEeCCCcchhhhhccCCC
Confidence 446678999999997 553 788888888 577 899987443545544 355531 22222111 111125699
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+-. .+ . .. +....+.|+++|+++.
T Consensus 218 ~v~d~-~g-------~-~~-~~~~~~~l~~~G~iv~ 243 (321)
T 3tqh_A 218 AVIDL-VG-------G-DV-GIQSIDCLKETGCIVS 243 (321)
T ss_dssp EEEES-SC-------H-HH-HHHHGGGEEEEEEEEE
T ss_pred EEEEC-CC-------c-HH-HHHHHHhccCCCEEEE
Confidence 98842 21 1 12 2667799999999883
No 366
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=93.26 E-value=0.11 Score=48.24 Aligned_cols=93 Identities=17% Similarity=0.190 Sum_probs=58.8
Q ss_pred cCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEE-cceeecc-----CCC
Q 016992 118 KFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLK-GKIEEIE-----LPV 187 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~-~d~~~~~-----~~~ 187 (379)
....+|++||.+|++ .|..+..+++ .|+ +|+++|.++ .++.+++ .|.. . ++. .+..++. ...
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~~~~~~~~ 236 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGGE--V-FIDFTKEKDIVGAVLKATD 236 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTCC--E-EEETTTCSCHHHHHHHHHT
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCCc--e-EEecCccHhHHHHHHHHhC
Confidence 356789999999983 4666666666 576 999999988 7776654 3432 1 221 1111110 001
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.+|+|+... + ....+....+.|+++|+++.
T Consensus 237 ~~~D~vi~~~-g--------~~~~~~~~~~~l~~~G~iv~ 267 (347)
T 2hcy_A 237 GGAHGVINVS-V--------SEAAIEASTRYVRANGTTVL 267 (347)
T ss_dssp SCEEEEEECS-S--------CHHHHHHHTTSEEEEEEEEE
T ss_pred CCCCEEEECC-C--------cHHHHHHHHHHHhcCCEEEE
Confidence 2699998642 1 12456777899999999873
No 367
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.22 E-value=0.27 Score=45.87 Aligned_cols=96 Identities=20% Similarity=0.207 Sum_probs=59.0
Q ss_pred HHhccCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|++||-.|++ .|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+-.++.
T Consensus 162 l~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~~d~~~~~~~~~~~~ 233 (351)
T 1yb5_A 162 LIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGAH---EVFNHREVNYIDKIKK 233 (351)
T ss_dssp HHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTSTTHHHHHHH
T ss_pred HHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCCC---EEEeCCCchHHHHHHH
Confidence 3334567889999999973 3566666666 576 899999988 7776543 3432 12211111110
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... + . ..+....+.|+++|+++.
T Consensus 234 ~~~~~~~D~vi~~~-G-------~--~~~~~~~~~l~~~G~iv~ 267 (351)
T 1yb5_A 234 YVGEKGIDIIIEML-A-------N--VNLSKDLSLLSHGGRVIV 267 (351)
T ss_dssp HHCTTCEEEEEESC-H-------H--HHHHHHHHHEEEEEEEEE
T ss_pred HcCCCCcEEEEECC-C-------h--HHHHHHHHhccCCCEEEE
Confidence 1124799998532 1 1 234566789999999874
No 368
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=92.96 E-value=0.098 Score=48.39 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=59.8
Q ss_pred HHhccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......++++||-.|+ |.|..+..+++ .|+ +|+++|.++ .++.+++ .|. + . ++..+-.+..
T Consensus 137 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~----~g~-~-~-~~d~~~~~~~~~i~~ 208 (333)
T 1wly_A 137 LHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARK----LGC-H-H-TINYSTQDFAEVVRE 208 (333)
T ss_dssp HHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTC-S-E-EEETTTSCHHHHHHH
T ss_pred HHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC-C-E-EEECCCHHHHHHHHH
Confidence 333456778999999995 45666666666 576 999999998 8877754 243 2 1 1211111110
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. ..+....+.|+++|.++.
T Consensus 209 ~~~~~~~d~vi~~~-g~---------~~~~~~~~~l~~~G~iv~ 242 (333)
T 1wly_A 209 ITGGKGVDVVYDSI-GK---------DTLQKSLDCLRPRGMCAA 242 (333)
T ss_dssp HHTTCCEEEEEECS-CT---------TTHHHHHHTEEEEEEEEE
T ss_pred HhCCCCCeEEEECC-cH---------HHHHHHHHhhccCCEEEE
Confidence 1124699998542 21 234566688999999873
No 369
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=92.83 E-value=0.084 Score=49.39 Aligned_cols=96 Identities=13% Similarity=0.163 Sum_probs=58.8
Q ss_pred hccCCCCC--CEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 116 QNKFLFKD--KVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 116 ~~~~~~~~--~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
......+| ++||-.|++ .|..+..+++ .|+.+|++++.++ .++.+++. .|.. . ++..+-.++.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~-~~d~~~~~~~~~~~~ 225 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFD--A-AINYKKDNVAEQLRE 225 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCS--E-EEETTTSCHHHHHHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCc--e-EEecCchHHHHHHHH
Confidence 33566788 999999983 3555555666 5766999999988 76666532 3432 1 1211111110
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
...+.+|+++... + ...+....+.|+++|+++.
T Consensus 226 ~~~~~~d~vi~~~-G---------~~~~~~~~~~l~~~G~iv~ 258 (357)
T 2zb4_A 226 SCPAGVDVYFDNV-G---------GNISDTVISQMNENSHIIL 258 (357)
T ss_dssp HCTTCEEEEEESC-C---------HHHHHHHHHTEEEEEEEEE
T ss_pred hcCCCCCEEEECC-C---------HHHHHHHHHHhccCcEEEE
Confidence 1113699998542 1 1456667789999999873
No 370
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.73 E-value=0.12 Score=47.54 Aligned_cols=87 Identities=22% Similarity=0.171 Sum_probs=56.3
Q ss_pred CCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeEEEEec
Q 016992 123 DKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDIIISEW 197 (379)
Q Consensus 123 ~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Iv~~~ 197 (379)
+. ||-.|+ | .|.++..+|+ .|+ +|++++.++ ..+.+++ .|... .+-..+.... .+....+|+|+-.
T Consensus 148 g~-VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~~~~~~~~d~v~d~- 218 (324)
T 3nx4_A 148 GE-VVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKS----LGANR--ILSRDEFAESRPLEKQLWAGAIDT- 218 (324)
T ss_dssp CC-EEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHH----HTCSE--EEEGGGSSCCCSSCCCCEEEEEES-
T ss_pred Ce-EEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCCE--EEecCCHHHHHhhcCCCccEEEEC-
Confidence 45 999997 3 4788888888 577 999999998 8888865 34321 1111111111 1223579988742
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+ . ..+....+.|+++|+++.
T Consensus 219 ~g-------~--~~~~~~~~~l~~~G~iv~ 239 (324)
T 3nx4_A 219 VG-------D--KVLAKVLAQMNYGGCVAA 239 (324)
T ss_dssp SC-------H--HHHHHHHHTEEEEEEEEE
T ss_pred CC-------c--HHHHHHHHHHhcCCEEEE
Confidence 21 1 256777789999999884
No 371
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=92.68 E-value=0.29 Score=51.96 Aligned_cols=75 Identities=23% Similarity=0.138 Sum_probs=54.7
Q ss_pred CCEEEEEcCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---------------cC
Q 016992 123 DKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---------------EL 185 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---------------~~ 185 (379)
..+++||-||.|++++.+.++|. ..|.|+|+++ +++.-+.|.. ...++.+|+.++ .+
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 34899999999999999999987 6788999999 7776665532 245666665432 01
Q ss_pred C-CCceeEEEEecCccccC
Q 016992 186 P-VTKVDIIISEWMGYFLL 203 (379)
Q Consensus 186 ~-~~~~D~Iv~~~~~~~l~ 203 (379)
+ .+.+|+|+..+++..+.
T Consensus 614 p~~~~vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFS 632 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCC
T ss_pred ccCCCeeEEEEcCCCcchh
Confidence 1 25799999988766554
No 372
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.62 E-value=0.38 Score=44.62 Aligned_cols=93 Identities=25% Similarity=0.293 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEEcCCC--chHHHHHHH-c-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-----cCCC
Q 016992 118 KFLFKDKVVLDVGAGT--GILSLFCAK-A-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-----ELPV 187 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~--G~~~~~la~-~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-----~~~~ 187 (379)
....++++||..|+|. |..+..+++ . |+ +|+++|.++ .++.+++ .|. + ..+-..+ .+. ....
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~----~g~-~-~~~~~~~-~~~~~~~~~~~~ 237 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKR----AGA-D-YVINASM-QDPLAEIRRITE 237 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHH----HTC-S-EEEETTT-SCHHHHHHHHTT
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCC-C-EEecCCC-ccHHHHHHHHhc
Confidence 5677899999999984 455566666 5 76 899999998 8877754 243 2 1121111 111 0111
Q ss_pred -CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 188 -TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 188 -~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+.+|+|+... +. ...+....+.|+++|.++.
T Consensus 238 ~~~~d~vi~~~-g~--------~~~~~~~~~~l~~~G~iv~ 269 (347)
T 1jvb_A 238 SKGVDAVIDLN-NS--------EKTLSVYPKALAKQGKYVM 269 (347)
T ss_dssp TSCEEEEEESC-CC--------HHHHTTGGGGEEEEEEEEE
T ss_pred CCCceEEEECC-CC--------HHHHHHHHHHHhcCCEEEE
Confidence 4799998542 11 2355666789999999873
No 373
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.60 E-value=0.11 Score=48.92 Aligned_cols=91 Identities=24% Similarity=0.231 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc---CCCCceeE
Q 016992 120 LFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---LPVTKVDI 192 (379)
Q Consensus 120 ~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~ 192 (379)
..+|.+||-.|+ | .|..+..+++ .|+ +|++++ ++ ..+.++ ..|.. .++..+-.++. .....+|+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~----~lGa~---~v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVR----KLGAD---DVIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH----HTTCS---EEEETTSSCHHHHHHTSCCBSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHH----HcCCC---EEEECCchHHHHHHhhcCCCCE
Confidence 678999999993 4 4677777777 576 899998 55 655554 34542 12221111110 11146999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+-. .+. ....+....+.|++||.++.
T Consensus 252 vid~-~g~-------~~~~~~~~~~~l~~~G~iv~ 278 (375)
T 2vn8_A 252 ILDN-VGG-------STETWAPDFLKKWSGATYVT 278 (375)
T ss_dssp EEES-SCT-------THHHHGGGGBCSSSCCEEEE
T ss_pred EEEC-CCC-------hhhhhHHHHHhhcCCcEEEE
Confidence 9853 221 11234555688999999873
No 374
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.14 E-value=0.1 Score=48.81 Aligned_cols=96 Identities=24% Similarity=0.239 Sum_probs=60.0
Q ss_pred HHhccCCCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|.+||-.|+ | .|..+..+++ .|+ +|+++|.++ .++.+++ .|.. .++..+-.++.
T Consensus 159 l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 159 LFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACER----LGAK---RGINYRSEDFAAVIKA 230 (353)
T ss_dssp HTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----HTCS---EEEETTTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCC---EEEeCCchHHHHHHHH
Confidence 334456788999999953 3 3667777777 576 899999998 8887765 3432 12221111110
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+... +. . .+....+.|+++|.++.
T Consensus 231 ~~~~g~Dvvid~~-g~-----~----~~~~~~~~l~~~G~iv~ 263 (353)
T 4dup_A 231 ETGQGVDIILDMI-GA-----A----YFERNIASLAKDGCLSI 263 (353)
T ss_dssp HHSSCEEEEEESC-CG-----G----GHHHHHHTEEEEEEEEE
T ss_pred HhCCCceEEEECC-CH-----H----HHHHHHHHhccCCEEEE
Confidence 0025799998532 21 1 34556688999999874
No 375
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=92.12 E-value=0.85 Score=42.95 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=67.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCC-cEEEEEcceeeccCCCCceeEEEEecCc
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSN-VITVLKGKIEEIELPVTKVDIIISEWMG 199 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~Iv~~~~~ 199 (379)
.+.+||.++.+-|.++..++.. .++.+.-|- .....+.|+..|++.. .+++... ... + ...+|+|+..+.
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~--~-~~~~~~v~~~lp- 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFLDS-TAD--Y-PQQPGVVLIKVP- 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET-TSC--C-CSSCSEEEEECC-
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc-ccc--c-ccCCCEEEEEcC-
Confidence 4567999999999999888754 345553344 5567788999999864 3666532 121 2 378999997653
Q ss_pred cccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 200 YFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 200 ~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.....+...|..+...|+||+.++
T Consensus 110 ---k~~~~l~~~L~~l~~~l~~~~~i~ 133 (375)
T 4dcm_A 110 ---KTLALLEQQLRALRKVVTSDTRII 133 (375)
T ss_dssp ---SCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred ---CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 333667788888999999999886
No 376
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=91.98 E-value=0.4 Score=44.68 Aligned_cols=94 Identities=21% Similarity=0.121 Sum_probs=57.2
Q ss_pred hccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec----c--C
Q 016992 116 QNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI----E--L 185 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~----~--~ 185 (379)
......+|++||-.|+ |.|..+..+++ .|+ +|+++|.++ .++.+++ .|. + . ++..+-.++ . .
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~g~-~-~-~~~~~~~~~~~~~~~~~ 227 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEK----LGA-A-A-GFNYKKEDFSEATLKFT 227 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----HTC-S-E-EEETTTSCHHHHHHHHT
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCC-c-E-EEecCChHHHHHHHHHh
Confidence 3456778999999985 34556666666 576 899999988 8777743 243 2 1 121111111 0 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
....+|+|+... +. . .+....+.|++||.++.
T Consensus 228 ~~~~~d~vi~~~-G~-----~----~~~~~~~~l~~~G~iv~ 259 (354)
T 2j8z_A 228 KGAGVNLILDCI-GG-----S----YWEKNVNCLALDGRWVL 259 (354)
T ss_dssp TTSCEEEEEESS-CG-----G----GHHHHHHHEEEEEEEEE
T ss_pred cCCCceEEEECC-Cc-----h----HHHHHHHhccCCCEEEE
Confidence 124699998542 21 1 24455688999999873
No 377
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=91.97 E-value=0.46 Score=48.44 Aligned_cols=108 Identities=19% Similarity=0.131 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHc-----------C--CCEEEEEec---HH-HHHH-----------HHHHHHHcCC--C-
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA-----------G--AAHVYAVEC---SQ-MANM-----------AKQIVEANGF--S- 170 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~-----------g--~~~v~~vD~---s~-~~~~-----------a~~~~~~~~~--~- 170 (379)
+.-+|||+|-|+|...+.+.+. . .-+++++|. +. .+.. +++....... +
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 3458999999999766655431 1 136899998 43 3331 2232322211 0
Q ss_pred ----------CcEEEEEcceeecc--CC---CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 171 ----------NVITVLKGKIEEIE--LP---VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 171 ----------~~i~~~~~d~~~~~--~~---~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
-.+++..+|+.+.- +. ...||+++.+.+......+-.-..++..+.++++|||.+....
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 12456667765532 11 3679999987653322222123678899999999999987543
No 378
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.82 E-value=0.38 Score=50.01 Aligned_cols=42 Identities=19% Similarity=0.142 Sum_probs=34.5
Q ss_pred CCEEEEEcCCCchHHHHHHHcC------CCEEEEEecHH-HHHHHHHHH
Q 016992 123 DKVVLDVGAGTGILSLFCAKAG------AAHVYAVECSQ-MANMAKQIV 164 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~g------~~~v~~vD~s~-~~~~a~~~~ 164 (379)
..+||||-||.|+++.-+.++| ...+.++|+++ +++.-+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3589999999999999887765 45788999999 877766664
No 379
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.58 E-value=0.26 Score=45.48 Aligned_cols=48 Identities=17% Similarity=0.288 Sum_probs=37.9
Q ss_pred CCCCCEEEEEcCCCchHHHHHHHcCCCEEEEEecHH----HHHHHHHHHHHcC
Q 016992 120 LFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSQ----MANMAKQIVEANG 168 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la~~g~~~v~~vD~s~----~~~~a~~~~~~~~ 168 (379)
..+|..|||.-||+|..+..+.+.|. +.+|+|+++ .++.+++++.+.+
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 36889999999999999999988875 999999995 5677777776544
No 380
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.54 E-value=0.65 Score=43.00 Aligned_cols=93 Identities=22% Similarity=0.247 Sum_probs=59.3
Q ss_pred HHhccCCCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----
Q 016992 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----- 184 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----- 184 (379)
+.......+|.+||-+|+ | .|.++..+++ .|+ +|+++ .++ .++.+++ .|.. . +. +..++.
T Consensus 142 l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~----lGa~--~--i~-~~~~~~~~~~~ 210 (343)
T 3gaz_A 142 LVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRD----LGAT--P--ID-ASREPEDYAAE 210 (343)
T ss_dssp HTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHH----HTSE--E--EE-TTSCHHHHHHH
T ss_pred HHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHH----cCCC--E--ec-cCCCHHHHHHH
Confidence 334456788999999994 3 3777777777 576 89999 777 7776654 3432 1 22 211111
Q ss_pred -CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 185 -LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 185 -~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.....+|+|+-. .+ . ..+....+.|+++|.++.
T Consensus 211 ~~~~~g~D~vid~-~g------~---~~~~~~~~~l~~~G~iv~ 244 (343)
T 3gaz_A 211 HTAGQGFDLVYDT-LG------G---PVLDASFSAVKRFGHVVS 244 (343)
T ss_dssp HHTTSCEEEEEES-SC------T---HHHHHHHHHEEEEEEEEE
T ss_pred HhcCCCceEEEEC-CC------c---HHHHHHHHHHhcCCeEEE
Confidence 122579998853 21 1 245666688999999884
No 381
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.38 E-value=0.17 Score=46.69 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=41.6
Q ss_pred CcEEEE-Ecceeec--cCCCCceeEEEEecCccccC---------ChhhHHHHHHHHHhcccCCEEEEec
Q 016992 171 NVITVL-KGKIEEI--ELPVTKVDIIISEWMGYFLL---------FENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 171 ~~i~~~-~~d~~~~--~~~~~~~D~Iv~~~~~~~l~---------~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
....++ ++|+.+. .+++++||+|+++++ |... ....+...+.++.++|+|||.++..
T Consensus 37 ~~~~l~i~gD~l~~L~~l~~~svDlI~tDPP-Y~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 37 TTRHVYDVCDCLDTLAKLPDDSVQLIICDPP-YNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp CEEEEEEECCHHHHHHTSCTTCEEEEEECCC-SBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccceEEECCcHHHHHHhCccCCcCEEEECCC-CCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 346788 9998764 245679999999975 5443 1124567788889999999998854
No 382
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.30 E-value=1.7 Score=38.58 Aligned_cols=96 Identities=11% Similarity=-0.017 Sum_probs=60.0
Q ss_pred CEEEEEcCCCchHHHHHHHc----CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 124 KVVLDVGAGTGILSLFCAKA----GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~~----g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
++||-.| + |.++..+++. |. +|++++.++ ....... .+++++.+|+.++. ...+|+||....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh--------CCCeEEEecccccc--cCCCCEEEECCC
Confidence 5899999 4 8888888762 54 999999887 5443322 34899999999876 478999997532
Q ss_pred ccccCChhhHHHHHHHHHhcc-cCCEEEEecCCceE
Q 016992 199 GYFLLFENMLNTVLYARDKWL-VDDGIVLPDKASLY 233 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~L-kpgG~lip~~~~~~ 233 (379)
...........+++.+.+.- +..-.++.++..+|
T Consensus 73 -~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vy 107 (286)
T 3ius_A 73 -PDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVY 107 (286)
T ss_dssp -CBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGG
T ss_pred -ccccccHHHHHHHHHHHhhcCCceEEEEeecceec
Confidence 22122233455566555431 22334444444444
No 383
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=91.29 E-value=1.4 Score=39.15 Aligned_cols=102 Identities=20% Similarity=0.233 Sum_probs=63.7
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH------------H-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS------------Q-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s------------~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
..+++||-.|++.| .++..+++.|+ +|+.+|.+ . .++.+...+...+ .++.++.+|+.+..
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 46789999998765 23444555576 89999976 5 5555555555554 46899999987643
Q ss_pred C-----C-----CCceeEEEEecCcccc----CChhhH-----------HHHHHHHHhcccCCEEEE
Q 016992 185 L-----P-----VTKVDIIISEWMGYFL----LFENML-----------NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 185 ~-----~-----~~~~D~Iv~~~~~~~l----~~~~~~-----------~~~l~~~~~~LkpgG~li 226 (379)
. . .+.+|++|.+. +... .....+ -.+++.+.+.++.+|.++
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nA-g~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv 150 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANA-GICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASII 150 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC-CCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECC-CcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEE
Confidence 1 0 14789999864 1111 111222 234556667777788876
No 384
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=91.14 E-value=0.17 Score=47.38 Aligned_cols=94 Identities=22% Similarity=0.188 Sum_probs=56.9
Q ss_pred cCCC-CCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-CCCCceeE
Q 016992 118 KFLF-KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-LPVTKVDI 192 (379)
Q Consensus 118 ~~~~-~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~ 192 (379)
.... +|.+||-+|+|. |.++..+++ .|+ +|++++.++ .++.+++ ..|... + +-..+...+. .. +.+|+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~---~lGa~~-v-i~~~~~~~~~~~~-~g~D~ 247 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQ---DLGADD-Y-VIGSDQAKMSELA-DSLDY 247 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHT---TSCCSC-E-EETTCHHHHHHST-TTEEE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH---HcCCce-e-eccccHHHHHHhc-CCCCE
Confidence 3456 899999999864 666677777 577 899999998 7776652 244322 1 1111111111 12 46999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+-. .+. .. .+....+.|+++|+++.
T Consensus 248 vid~-~g~----~~----~~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 248 VIDT-VPV----HH----ALEPYLSLLKLDGKLIL 273 (357)
T ss_dssp EEEC-CCS----CC----CSHHHHTTEEEEEEEEE
T ss_pred EEEC-CCC----hH----HHHHHHHHhccCCEEEE
Confidence 9853 221 11 13344578999999873
No 385
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=91.12 E-value=0.29 Score=45.77 Aligned_cols=100 Identities=12% Similarity=0.134 Sum_probs=55.8
Q ss_pred HHhccCCCCC-CEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc------ceee
Q 016992 114 IYQNKFLFKD-KVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG------KIEE 182 (379)
Q Consensus 114 i~~~~~~~~~-~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~------d~~~ 182 (379)
+.......+| .+||-.|+ | .|.++..+|+ .|+ +|+++..+. .+...++.++..|... ++.. ++.+
T Consensus 158 l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~~~ 233 (364)
T 1gu7_A 158 LTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGATQ---VITEDQNNSREFGP 233 (364)
T ss_dssp HHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTCSE---EEEHHHHHCGGGHH
T ss_pred HHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHHHHhcCCeE---EEecCccchHHHHH
Confidence 3333456789 99999997 3 4777888888 577 777776443 3222222334456521 2221 1111
Q ss_pred -cc-C---CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 183 -IE-L---PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 183 -~~-~---~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+. . ....+|+|+-. .+ . .... ...+.|+++|+++.
T Consensus 234 ~i~~~t~~~~~g~Dvvid~-~G-------~-~~~~-~~~~~l~~~G~~v~ 273 (364)
T 1gu7_A 234 TIKEWIKQSGGEAKLALNC-VG-------G-KSST-GIARKLNNNGLMLT 273 (364)
T ss_dssp HHHHHHHHHTCCEEEEEES-SC-------H-HHHH-HHHHTSCTTCEEEE
T ss_pred HHHHHhhccCCCceEEEEC-CC-------c-hhHH-HHHHHhccCCEEEE
Confidence 10 0 12469999842 21 1 1223 45689999999874
No 386
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=91.03 E-value=3.4 Score=38.18 Aligned_cols=120 Identities=9% Similarity=0.109 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhccCCC-CCCEEEEEcCCCchHHHHHHHc--CCCEEEEEecHHHHHHHHHHHHHcC-------------
Q 016992 105 VRTKSYQNVIYQNKFLF-KDKVVLDVGAGTGILSLFCAKA--GAAHVYAVECSQMANMAKQIVEANG------------- 168 (379)
Q Consensus 105 ~r~~~~~~~i~~~~~~~-~~~~VLDlGcG~G~~~~~la~~--g~~~v~~vD~s~~~~~a~~~~~~~~------------- 168 (379)
.|+..+...+.+.+... +...|+-||||.=.....+... ...+++=||..+.++.=++.+...+
T Consensus 72 ~Rt~~iD~~v~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~ 151 (334)
T 3iei_A 72 ARVHGVSQLIKAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSED 151 (334)
T ss_dssp HHHHHHHHHHHHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSS
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhccccccc
Confidence 45555555554443322 4579999999988777776653 2357888888774444334444311
Q ss_pred ---------CCCcEEEEEcceeecc----------CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 169 ---------FSNVITVLKGKIEEIE----------LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 169 ---------~~~~i~~~~~d~~~~~----------~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
-+.+..++..|+.+.. ++....-+++++.+..++. +.....+++.+..... +|.++
T Consensus 152 ~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~-~~~~~~ll~~ia~~f~-~~~~i 226 (334)
T 3iei_A 152 TLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMT-PEQSANLLKWAANSFE-RAMFI 226 (334)
T ss_dssp SCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSC-HHHHHHHHHHHHHHCS-SEEEE
T ss_pred ccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCC-HHHHHHHHHHHHHhCC-CceEE
Confidence 1367889999987631 2335567899998766554 4566788888887664 45444
No 387
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=90.89 E-value=0.4 Score=44.70 Aligned_cols=95 Identities=14% Similarity=0.290 Sum_probs=56.4
Q ss_pred cCCCCC------CEEEEEcCCC-chHH-HHHH-H-cCCCEEEEEecHH----HHHHHHHHHHHcCCCCcEEEEEcceeec
Q 016992 118 KFLFKD------KVVLDVGAGT-GILS-LFCA-K-AGAAHVYAVECSQ----MANMAKQIVEANGFSNVITVLKGKIEEI 183 (379)
Q Consensus 118 ~~~~~~------~~VLDlGcG~-G~~~-~~la-~-~g~~~v~~vD~s~----~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (379)
....+| .+||-+|+|. |.++ ..+| + .|+.+|+++|.++ .++.++ +.|. +.+.....|+.++
T Consensus 162 ~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa-~~v~~~~~~~~~i 236 (357)
T 2b5w_A 162 AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE----ELDA-TYVDSRQTPVEDV 236 (357)
T ss_dssp HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH----HTTC-EEEETTTSCGGGH
T ss_pred cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH----HcCC-cccCCCccCHHHH
Confidence 345678 9999999864 6777 7778 6 5776699999865 344443 4554 1120000011111
Q ss_pred -cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 184 -ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 184 -~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
... +.+|+|+-. .+ . ...+....+.|+++|+++.
T Consensus 237 ~~~~-gg~Dvvid~-~g----~----~~~~~~~~~~l~~~G~iv~ 271 (357)
T 2b5w_A 237 PDVY-EQMDFIYEA-TG----F----PKHAIQSVQALAPNGVGAL 271 (357)
T ss_dssp HHHS-CCEEEEEEC-SC----C----HHHHHHHHHHEEEEEEEEE
T ss_pred HHhC-CCCCEEEEC-CC----C----hHHHHHHHHHHhcCCEEEE
Confidence 012 379999842 21 1 2345666788999999873
No 388
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=90.82 E-value=0.47 Score=44.23 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=55.3
Q ss_pred HHhccCCCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc------ceeec
Q 016992 114 IYQNKFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG------KIEEI 183 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~------d~~~~ 183 (379)
+.......+|.+||-+|+ | .|.++..+|+ .|+..|..++.++ .-+. .+.++..|.. .++.. ++.++
T Consensus 159 l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~~~~lGa~---~vi~~~~~~~~~~~~~ 234 (357)
T 1zsy_A 159 LMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKL-SDRLKSLGAE---HVITEEELRRPEMKNF 234 (357)
T ss_dssp HHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHH-HHHHHHTTCS---EEEEHHHHHSGGGGGT
T ss_pred HHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHH-HHHHHhcCCc---EEEecCcchHHHHHHH
Confidence 334456789999999997 3 4788888888 5875555665543 2111 1223445642 12221 11111
Q ss_pred cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 184 ~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.-....+|+|+-. .+ . ... ....+.|+++|+++.
T Consensus 235 ~~~~~~~Dvvid~-~g-------~-~~~-~~~~~~l~~~G~iv~ 268 (357)
T 1zsy_A 235 FKDMPQPRLALNC-VG-------G-KSS-TELLRQLARGGTMVT 268 (357)
T ss_dssp TSSSCCCSEEEES-SC-------H-HHH-HHHHTTSCTTCEEEE
T ss_pred HhCCCCceEEEEC-CC-------c-HHH-HHHHHhhCCCCEEEE
Confidence 1111248998842 21 1 112 235689999999874
No 389
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.69 E-value=0.85 Score=36.12 Aligned_cols=88 Identities=16% Similarity=0.136 Sum_probs=52.6
Q ss_pred CEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----CCCCceeEEEEe
Q 016992 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDIIISE 196 (379)
Q Consensus 124 ~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~Iv~~ 196 (379)
.+|+-+|+|. | .++..+.+.|. .|+++|.++ .++.+++ .| +.++.+|..+.. .....+|+|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~g----~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----RG----VRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----cC----CCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 4788888864 3 22333334565 999999999 7776653 22 578888876542 123578998864
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.. . ......+-...+.+.|+..++
T Consensus 79 ~~-----~-~~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 79 IP-----N-GYEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp CS-----C-HHHHHHHHHHHHHHCSSSEEE
T ss_pred CC-----C-hHHHHHHHHHHHHHCCCCeEE
Confidence 21 1 111222233445667777665
No 390
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.54 E-value=1 Score=39.64 Aligned_cols=99 Identities=14% Similarity=0.199 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++...+.+ + .++.++.+|+.+... .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---G--PRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---G--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---C--CcceEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999998765 23444455576 899999988 665554443 2 468999999876531 0
Q ss_pred CCceeEEEEecCccccC------ChhhH-----------HHHHHHHHhcccCCEEEE
Q 016992 187 VTKVDIIISEWMGYFLL------FENML-----------NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~------~~~~~-----------~~~l~~~~~~LkpgG~li 226 (379)
.+.+|++|.+. +.... ....+ -.+.+.+...++++|.++
T Consensus 80 ~g~id~lv~nA-g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv 135 (255)
T 4eso_A 80 LGAIDLLHINA-GVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIV 135 (255)
T ss_dssp HSSEEEEEECC-CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEE
T ss_pred hCCCCEEEECC-CCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEE
Confidence 24789999763 11110 11111 134555667777788876
No 391
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.46 E-value=0.66 Score=41.70 Aligned_cols=99 Identities=14% Similarity=0.155 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
.+|+++|--|++.| ..+..+++.|+ +|+.+|.++ .++.+.+.+ + .++..+.+|+.+... .
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 100 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVKAE 100 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence 57899999998887 34555566677 999999998 666554333 3 457788889876431 1
Q ss_pred CCceeEEEEecCccccC------ChhhH-----------HHHHHHHHhcccCCEEEE
Q 016992 187 VTKVDIIISEWMGYFLL------FENML-----------NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~------~~~~~-----------~~~l~~~~~~LkpgG~li 226 (379)
.++.|++|.+. +.... .+.++ -.+.+++.+.++.+|.+|
T Consensus 101 ~G~iDiLVNNA-G~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~II 156 (273)
T 4fgs_A 101 AGRIDVLFVNA-GGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVV 156 (273)
T ss_dssp HSCEEEEEECC-CCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEE
T ss_pred cCCCCEEEECC-CCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEE
Confidence 36799999864 11110 11122 134455667788888776
No 392
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.44 E-value=1.7 Score=38.23 Aligned_cols=104 Identities=12% Similarity=0.091 Sum_probs=65.3
Q ss_pred CCCCEEEEEcCC--Cc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C---
Q 016992 121 FKDKVVLDVGAG--TG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG--~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (379)
..+++||-.|++ .| .++..+++.|+ +|+.++.++ ..+.+.+.....+- .++.++.+|+.+... .
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~ 82 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIK 82 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHH
Confidence 467899999987 44 24455556676 899999887 66666666555442 258899999876531 0
Q ss_pred --CCceeEEEEecCccc--------c-CChhhH-----------HHHHHHHHhcccCCEEEE
Q 016992 187 --VTKVDIIISEWMGYF--------L-LFENML-----------NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 187 --~~~~D~Iv~~~~~~~--------l-~~~~~~-----------~~~l~~~~~~LkpgG~li 226 (379)
.+.+|++|...-... . .....+ ..+++.+...++++|.+|
T Consensus 83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 144 (266)
T 3oig_A 83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIV 144 (266)
T ss_dssp HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEE
T ss_pred HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEE
Confidence 146899997641110 0 011111 135566777888888877
No 393
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=90.20 E-value=0.28 Score=46.74 Aligned_cols=42 Identities=17% Similarity=-0.079 Sum_probs=35.2
Q ss_pred CEEEEEcCCCchHHHHHHHcC--CCE----EEEEecHH-HHHHHHHHHH
Q 016992 124 KVVLDVGAGTGILSLFCAKAG--AAH----VYAVECSQ-MANMAKQIVE 165 (379)
Q Consensus 124 ~~VLDlGcG~G~~~~~la~~g--~~~----v~~vD~s~-~~~~a~~~~~ 165 (379)
.+|||+.||.|+++..+-++| ..- |.++|+++ ++..-+.+..
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~ 59 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHS 59 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHC
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcC
Confidence 489999999999999998876 345 89999999 8877777664
No 394
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.13 E-value=0.73 Score=42.39 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=67.0
Q ss_pred CCEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-------C-CC---------CcEEEEEcceee
Q 016992 123 DKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-------G-FS---------NVITVLKGKIEE 182 (379)
Q Consensus 123 ~~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~-------~-~~---------~~i~~~~~d~~~ 182 (379)
..+|.-||+|+ | .++..+|..|. .|+.+|+++ .++.+.+++... + +. .+|++. .|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~-~~l~~ 83 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccc-cchHh
Confidence 45899999997 3 56677777876 999999999 888777666432 1 11 123322 12222
Q ss_pred ccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceE
Q 016992 183 IELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLY 233 (379)
Q Consensus 183 ~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~ 233 (379)
. -...|+|+=. + .........++.++.++++|+.+|--++-++-
T Consensus 84 a---~~~ad~ViEa-v---~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~ 127 (319)
T 3ado_A 84 A---VEGVVHIQEC-V---PENLDLKRKIFAQLDSIVDDRVVLSSSSSCLL 127 (319)
T ss_dssp H---TTTEEEEEEC-C---CSCHHHHHHHHHHHHTTCCSSSEEEECCSSCC
T ss_pred H---hccCcEEeec-c---ccHHHHHHHHHHHHHHHhhhcceeehhhhhcc
Confidence 1 1567888732 2 34446678999999999999988875555443
No 395
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=90.12 E-value=0.2 Score=46.08 Aligned_cols=94 Identities=21% Similarity=0.147 Sum_probs=55.8
Q ss_pred CCCCCC-EEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cCCCCceeE
Q 016992 119 FLFKDK-VVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-ELPVTKVDI 192 (379)
Q Consensus 119 ~~~~~~-~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~ 192 (379)
...++. +||-+|+ |.|.++..+++ .|+ +|++++.++ .++.+++ .|...-+.....+...+ ......+|+
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~d~ 219 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLDKQRWAA 219 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCSEEEECC---------CCSCCEEE
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCcEEEecCCcHHHHHHHhcCCcccE
Confidence 456665 8999997 34777778887 576 799999988 7777754 45421111111110001 112246999
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
|+-. .+ . . .+....+.|+++|+++.
T Consensus 220 vid~-~g----~-~----~~~~~~~~l~~~G~~v~ 244 (328)
T 1xa0_A 220 AVDP-VG----G-R----TLATVLSRMRYGGAVAV 244 (328)
T ss_dssp EEEC-ST----T-T----THHHHHHTEEEEEEEEE
T ss_pred EEEC-Cc----H-H----HHHHHHHhhccCCEEEE
Confidence 8853 22 1 1 24556688999999874
No 396
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=89.95 E-value=0.91 Score=49.64 Aligned_cols=77 Identities=22% Similarity=0.120 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHcCC-CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec---------------c
Q 016992 122 KDKVVLDVGAGTGILSLFCAKAGA-AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI---------------E 184 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~g~-~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~---------------~ 184 (379)
...+++||-||.|++++.+.++|. ..|.++|+++ +++.-+.+.. ...++.+|+.++ .
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP------GTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT------TSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC------CCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 345899999999999999999986 5788999999 7776665532 234566665422 1
Q ss_pred CC-CCceeEEEEecCccccCC
Q 016992 185 LP-VTKVDIIISEWMGYFLLF 204 (379)
Q Consensus 185 ~~-~~~~D~Iv~~~~~~~l~~ 204 (379)
++ .+.+|+|+..++|..+..
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~ 944 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSG 944 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCS
T ss_pred ccccCccceEEecCCCccccc
Confidence 11 246899999887766543
No 397
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.81 E-value=0.46 Score=45.79 Aligned_cols=95 Identities=21% Similarity=0.158 Sum_probs=58.6
Q ss_pred cCCCCCCEEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcce-------------
Q 016992 118 KFLFKDKVVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKI------------- 180 (379)
Q Consensus 118 ~~~~~~~~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~------------- 180 (379)
....+|++||-.|+ | .|..+..+++ .|+ +|++++.++ .++.+++ .|....+.....|.
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccch
Confidence 56788999999997 3 3677777777 466 889999888 7777753 45432111111111
Q ss_pred ------eecc-CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 181 ------EEIE-LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 181 ------~~~~-~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+. .....+|+|+... + . ..+....+.|++||.++.
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~-G-------~--~~~~~~~~~l~~~G~iv~ 334 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHT-G-------R--VTFGLSVIVARRGGTVVT 334 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECS-C-------H--HHHHHHHHHSCTTCEEEE
T ss_pred hhhHHHHHHHHHhCCCceEEEECC-C-------c--hHHHHHHHHHhcCCEEEE
Confidence 0000 0025699998532 1 1 245666688999999884
No 398
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.76 E-value=0.24 Score=44.13 Aligned_cols=55 Identities=11% Similarity=-0.025 Sum_probs=39.2
Q ss_pred EEEEEcceeec--cCCCCceeEEEEecCccccCCh------------hhHHHHHHHHHhcccCCEEEEec
Q 016992 173 ITVLKGKIEEI--ELPVTKVDIIISEWMGYFLLFE------------NMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 173 i~~~~~d~~~~--~~~~~~~D~Iv~~~~~~~l~~~------------~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
.+++++|+.+. .+++++||+|+++++ |..... ..+...+.++.++|+|||.++..
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPP-Y~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPP-YNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCC-CSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCC-CCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 45788887653 244579999999975 543310 24567788889999999998743
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.62 E-value=1.6 Score=39.17 Aligned_cols=103 Identities=25% Similarity=0.318 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH--HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ--MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~--~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.+. ..+.+.+.+...+ .++.++.+|+.+...
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 121 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVR 121 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999998765 23344455576 899998765 4444455454444 468999999876431
Q ss_pred CCCceeEEEEecCccc----cC--ChhhH-----------HHHHHHHHhcccCCEEEE
Q 016992 186 PVTKVDIIISEWMGYF----LL--FENML-----------NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~----l~--~~~~~-----------~~~l~~~~~~LkpgG~li 226 (379)
..+.+|++|.+.-... +. ....+ -.+++.+.+.++++|.+|
T Consensus 122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv 179 (291)
T 3ijr_A 122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVII 179 (291)
T ss_dssp HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEE
Confidence 0247899998631111 00 11111 245566677778888776
No 400
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=89.56 E-value=3.3 Score=37.15 Aligned_cols=73 Identities=14% Similarity=0.161 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCCc-----hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---------
Q 016992 121 FKDKVVLDVGAGTG-----ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G-----~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.++ ..+.+++.....+ ++.++.+|+.+...
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 104 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLE 104 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHH
Confidence 56889999998743 34445555676 899999887 6666666555543 48889999876431
Q ss_pred -CCCceeEEEEec
Q 016992 186 -PVTKVDIIISEW 197 (379)
Q Consensus 186 -~~~~~D~Iv~~~ 197 (379)
..+++|++|.+.
T Consensus 105 ~~~g~iD~lVnnA 117 (293)
T 3grk_A 105 KKWGKLDFLVHAI 117 (293)
T ss_dssp HHTSCCSEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 125789999864
No 401
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.50 E-value=0.37 Score=45.17 Aligned_cols=93 Identities=23% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCC-CCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ceeeccCCCCceeEE
Q 016992 119 FLF-KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KIEEIELPVTKVDII 193 (379)
Q Consensus 119 ~~~-~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D~I 193 (379)
... +|.+||-+|+|. |.++..+++ .|+ +|++++.++ .++.+++ ..|.. .++.. +...+....+.+|+|
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHTTTCEEEE
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHhhCCCCEE
Confidence 456 899999999764 566666666 576 899999988 7666542 23432 12211 111111011479999
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+... +.. . .+....+.|+++|.++.
T Consensus 256 id~~-g~~----~----~~~~~~~~l~~~G~iv~ 280 (366)
T 1yqd_A 256 IDTV-SAV----H----PLLPLFGLLKSHGKLIL 280 (366)
T ss_dssp EECC-SSC----C----CSHHHHHHEEEEEEEEE
T ss_pred EECC-CcH----H----HHHHHHHHHhcCCEEEE
Confidence 8532 211 1 12334577899999873
No 402
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=89.37 E-value=1.7 Score=38.59 Aligned_cols=102 Identities=17% Similarity=0.220 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH-H-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS-Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.. . ..+...+.+...+ .++.++.+|+.+...
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 57889999998775 23444555676 78887543 3 5555555555554 458899999876431
Q ss_pred CCCceeEEEEecCccccC------ChhhH-----------HHHHHHHHhcccCCEEEE
Q 016992 186 PVTKVDIIISEWMGYFLL------FENML-----------NTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~------~~~~~-----------~~~l~~~~~~LkpgG~li 226 (379)
..+++|++|.+. +.... ....+ -.+++.+.+.++++|.+|
T Consensus 106 ~~g~iD~lvnnA-g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv 162 (271)
T 3v2g_A 106 ALGGLDILVNSA-GIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRII 162 (271)
T ss_dssp HHSCCCEEEECC-CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEE
T ss_pred HcCCCcEEEECC-CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEE
Confidence 014789999864 11110 11111 234556667777788776
No 403
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.24 E-value=0.25 Score=45.44 Aligned_cols=91 Identities=24% Similarity=0.219 Sum_probs=57.1
Q ss_pred CCCCCC-EEEEEcC-C-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEc-ce-ee-c-cCCCCc
Q 016992 119 FLFKDK-VVLDVGA-G-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKG-KI-EE-I-ELPVTK 189 (379)
Q Consensus 119 ~~~~~~-~VLDlGc-G-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~-d~-~~-~-~~~~~~ 189 (379)
...++. +||-.|+ | .|..+..+++ .|+ +|++++.++ .++.+++ .|... ++.. +. .+ + ......
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~---v~~~~~~~~~~~~~~~~~~ 217 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ----LGASE---VISREDVYDGTLKALSKQQ 217 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH----HTCSE---EEEHHHHCSSCCCSSCCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCcE---EEECCCchHHHHHHhhcCC
Confidence 456675 8999997 3 4677777777 576 799999988 8777764 34321 2211 11 01 1 112246
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+|+-. .+ . ..+....+.|++||+++.
T Consensus 218 ~d~vid~-~g-------~--~~~~~~~~~l~~~G~iv~ 245 (330)
T 1tt7_A 218 WQGAVDP-VG-------G--KQLASLLSKIQYGGSVAV 245 (330)
T ss_dssp EEEEEES-CC-------T--HHHHHHHTTEEEEEEEEE
T ss_pred ccEEEEC-Cc-------H--HHHHHHHHhhcCCCEEEE
Confidence 9998843 21 1 245666789999999874
No 404
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=89.23 E-value=1.2 Score=39.55 Aligned_cols=74 Identities=26% Similarity=0.330 Sum_probs=55.7
Q ss_pred CCCCEEEEEcCCCch---HHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTGI---LSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~---~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
.+|+++|--|++.|+ ++..+++.|+ +|+.+|.++ .++.+.+.+...| .++.++.+|+.+... .
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999999988873 4555566676 899999999 8887777777766 458899999876431 1
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.++.|++|.+.
T Consensus 82 ~G~iDiLVNNA 92 (254)
T 4fn4_A 82 YSRIDVLCNNA 92 (254)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 26789999864
No 405
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=88.95 E-value=0.7 Score=41.07 Aligned_cols=74 Identities=19% Similarity=0.157 Sum_probs=55.0
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----------CC
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----------LP 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~ 186 (379)
.+|+++|--|++.| .++..+++.|+ +|+.+|.++ .++.+.+.+...+ .++.++.+|+.+.. -.
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 57899999998876 34555566677 999999998 7777767777766 35888888987642 12
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.++.|++|.+.
T Consensus 84 ~G~iDiLVNNA 94 (255)
T 4g81_D 84 GIHVDILINNA 94 (255)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCcEEEECC
Confidence 36899999864
No 406
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=88.75 E-value=1.3 Score=39.17 Aligned_cols=103 Identities=22% Similarity=0.291 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCCch---HHHHHHHcCCCEEEEEecH-H-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTGI---LSLFCAKAGAAHVYAVECS-Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~---~~~~la~~g~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..++++|-.|++.|+ ++..+++.|+ +|+.++.. . ..+...+.+...+ .++.++.+|+.+...
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 467899999987652 3444555676 88887653 4 5555555565554 458899999876431
Q ss_pred CCCceeEEEEecCccccC------ChhhH-----------HHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLL------FENML-----------NTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~------~~~~~-----------~~~l~~~~~~LkpgG~lip 227 (379)
..+..|++|.+. +.... ....+ -.+.+.+.+.++++|.+|.
T Consensus 93 ~~g~id~lvnnA-g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~ 150 (270)
T 3is3_A 93 HFGHLDIAVSNS-GVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVL 150 (270)
T ss_dssp HHSCCCEEECCC-CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEE
T ss_pred HcCCCCEEEECC-CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEE
Confidence 014689999753 11110 11111 2345566677777887763
No 407
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=88.75 E-value=0.16 Score=47.65 Aligned_cols=97 Identities=18% Similarity=0.154 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 122 KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 122 ~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
++++|+-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++.... .+..+..+..++......+|+||....
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence 458999999863 333333344 587 999999998 77777654422 222222221121100135899986431
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.... ..+.-+.....+.++|||.++-
T Consensus 240 ~~~~---~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 240 VPGR---RAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp CTTS---SCCCCBCHHHHTTSCTTCEEEE
T ss_pred cCCC---CCCeecCHHHHhhCCCCCEEEE
Confidence 1100 0000012334567899998873
No 408
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=88.54 E-value=2.2 Score=37.46 Aligned_cols=75 Identities=12% Similarity=0.130 Sum_probs=50.7
Q ss_pred CCCCCCEEEEEcCC-CchHHHH----HHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-------
Q 016992 119 FLFKDKVVLDVGAG-TGILSLF----CAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL------- 185 (379)
Q Consensus 119 ~~~~~~~VLDlGcG-~G~~~~~----la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------- 185 (379)
...++++||-.|++ +|.++.. +++.|+ +|+.++.+. ..+.+++.....+ .+.++.+|+.+...
T Consensus 10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~ 85 (271)
T 3ek2_A 10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFAS 85 (271)
T ss_dssp CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHH
Confidence 34678899999985 2444444 444576 899998887 6666666555543 37788889876431
Q ss_pred ---CCCceeEEEEec
Q 016992 186 ---PVTKVDIIISEW 197 (379)
Q Consensus 186 ---~~~~~D~Iv~~~ 197 (379)
..+++|++|.+.
T Consensus 86 ~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 86 LKTHWDSLDGLVHSI 100 (271)
T ss_dssp HHHHCSCEEEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 125789999864
No 409
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.22 E-value=1.3 Score=38.90 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCCchHHHHH----HH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C----
Q 016992 122 KDKVVLDVGAGTGILSLFC----AK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P---- 186 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~l----a~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 186 (379)
++++||-.|++ |.++..+ ++ .|. +|++++.+. .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 3 ~~k~vlITGas-ggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 3 GIHVALVTGGN-KGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCEEEESSCS-SHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHH
Confidence 56788888855 5555544 44 565 899999887 6666655565544 458889999876421 0
Q ss_pred -CCceeEEEEec
Q 016992 187 -VTKVDIIISEW 197 (379)
Q Consensus 187 -~~~~D~Iv~~~ 197 (379)
.+.+|+||...
T Consensus 79 ~~g~id~li~~A 90 (276)
T 1wma_A 79 EYGGLDVLVNNA 90 (276)
T ss_dssp HHSSEEEEEECC
T ss_pred hcCCCCEEEECC
Confidence 13789999753
No 410
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=87.98 E-value=2.2 Score=38.32 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH--H-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS--Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s--~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.+ . ..+.+.+.+...+ .++.++.+|+.+...
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~ 123 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKAR 123 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHH
Confidence 36789999997765 23344445576 89988876 3 4555555555555 458899999876421
Q ss_pred -CCCceeEEEEecCccc-cC-----ChhhH-----------HHHHHHHHhcccCCEEEEe
Q 016992 186 -PVTKVDIIISEWMGYF-LL-----FENML-----------NTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 -~~~~~D~Iv~~~~~~~-l~-----~~~~~-----------~~~l~~~~~~LkpgG~lip 227 (379)
..+.+|++|.+.-... .. ....+ -.+++.+...++++|.+|.
T Consensus 124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~ 183 (294)
T 3r3s_A 124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIIT 183 (294)
T ss_dssp HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEE
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEE
Confidence 0147899998642111 00 11111 2445666677888888773
No 411
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=87.85 E-value=1.2 Score=39.21 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=48.7
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEE-ecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAV-ECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P---- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~v-D~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 186 (379)
..+++||-.|++.| .++..+++.|+ +|+.+ +.+. ..+.+.+.+...+ .++.++.+|+.+... .
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999998776 23444555676 77777 6555 5555555555444 458889999876431 0
Q ss_pred -CCceeEEEEec
Q 016992 187 -VTKVDIIISEW 197 (379)
Q Consensus 187 -~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 83 ~~g~id~lv~nA 94 (259)
T 3edm_A 83 KFGEIHGLVHVA 94 (259)
T ss_dssp HHCSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 14789999864
No 412
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=87.84 E-value=4.3 Score=36.29 Aligned_cols=60 Identities=18% Similarity=0.103 Sum_probs=40.4
Q ss_pred CCCCEEEEEcCCCchHHHH----HHHcCCCEEEEEe-cHH-HHHHHHHHHH-HcCCCCcEEEEEcceeecc
Q 016992 121 FKDKVVLDVGAGTGILSLF----CAKAGAAHVYAVE-CSQ-MANMAKQIVE-ANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~----la~~g~~~v~~vD-~s~-~~~~a~~~~~-~~~~~~~i~~~~~d~~~~~ 184 (379)
..++++|-.|++.| ++.. +++.|+ +|+.++ .++ .++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 7 l~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 7 PTVPVALVTGAAKR-LGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 73 (291)
T ss_dssp -CCCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC--CeeEEEEeecCCcc
Confidence 35778998887665 4444 444576 899999 887 6665555554 333 45889999987654
No 413
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.72 E-value=3 Score=37.45 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCC--c---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C---
Q 016992 121 FKDKVVLDVGAGT--G---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~--G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (379)
..+++||-.|++. | .++..+++.|+ +|+.++.++ ..+.+.+.....+ .+.++.+|+.+... .
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~ 103 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLA 103 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHH
Confidence 4578999999864 4 24455555676 899999887 6666666555544 36788889876431 0
Q ss_pred --CCceeEEEEec
Q 016992 187 --VTKVDIIISEW 197 (379)
Q Consensus 187 --~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 104 ~~~g~iD~lVnnA 116 (296)
T 3k31_A 104 EEWGSLDFVVHAV 116 (296)
T ss_dssp HHHSCCSEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 14789999864
No 414
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.48 E-value=3 Score=40.37 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=60.4
Q ss_pred CEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-------C-C------CCcEEEEEcceeeccCC
Q 016992 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-------G-F------SNVITVLKGKIEEIELP 186 (379)
Q Consensus 124 ~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~-------~-~------~~~i~~~~~d~~~~~~~ 186 (379)
++|.-||+|. | .++..+++.|. .|+.+|.++ .++.+++.+..+ | + .....+ ..|...+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~--- 112 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 112 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG---
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH---
Confidence 5799999997 2 45556666676 899999999 888776543211 1 0 011222 3343222
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCC
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKA 230 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~ 230 (379)
...|+||.... ........++..+...++|+.+++-++.
T Consensus 113 -~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~snTs 151 (463)
T 1zcj_A 113 -STVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCTNTS 151 (463)
T ss_dssp -TTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -CCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEeCCC
Confidence 46899986432 1223346778888888999887775443
No 415
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=87.38 E-value=4.4 Score=37.11 Aligned_cols=96 Identities=18% Similarity=0.120 Sum_probs=61.4
Q ss_pred CEEEEEcCCC--chHHHHHHHcCCCEEEEEecHH-HHHHHHHHHH-------HcCCC----------CcEEEEEcceeec
Q 016992 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVE-------ANGFS----------NVITVLKGKIEEI 183 (379)
Q Consensus 124 ~~VLDlGcG~--G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~-------~~~~~----------~~i~~~~~d~~~~ 183 (379)
.+|--||+|. +.++..+++.|. +|+++|.++ .++.+.+.+. ..|+- .++++. .|..+.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 5788999986 355666777776 899999999 8888765532 22321 124433 233222
Q ss_pred cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 184 ~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
-...|+|+...+ ........++..+...++|+.+++-.
T Consensus 85 ---v~~aDlVieavp----e~~~~k~~v~~~l~~~~~~~~Ii~s~ 122 (319)
T 2dpo_A 85 ---VEGVVHIQECVP----ENLDLKRKIFAQLDSIVDDRVVLSSS 122 (319)
T ss_dssp ---TTTEEEEEECCC----SCHHHHHHHHHHHHTTCCSSSEEEEC
T ss_pred ---HhcCCEEEEecc----CCHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 156899986432 12234567888888999998877633
No 416
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.21 E-value=1.1 Score=42.68 Aligned_cols=87 Identities=14% Similarity=0.180 Sum_probs=55.7
Q ss_pred CCEEEEEcCCCchHHHHHHH----cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----CCCCceeEE
Q 016992 123 DKVVLDVGAGTGILSLFCAK----AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDII 193 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~----~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~I 193 (379)
+.+|+-+|+|. ++..+++ .|. .|++||.++ .++.+++ .| +.++.+|+.+.. .....+|+|
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGV-KMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTC-CEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHTTTTTCSEE
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCC-CEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhcCCCccCEE
Confidence 45688888764 4444443 454 899999999 8887763 23 568899988753 223678998
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
|+..- . ......+-...+.+.|+..++
T Consensus 73 iv~~~-----~-~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 73 INAID-----D-PQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp EECCS-----S-HHHHHHHHHHHHHHCTTCEEE
T ss_pred EECCC-----C-hHHHHHHHHHHHHhCCCCeEE
Confidence 86421 1 223334444556677886666
No 417
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=87.11 E-value=0.18 Score=47.62 Aligned_cols=98 Identities=17% Similarity=0.113 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEec
Q 016992 121 FKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEW 197 (379)
Q Consensus 121 ~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~ 197 (379)
.++++|+-+|+|. |.....+++ .|+ +|+++|.++ .++.+++.. |.. +.....+..++......+|+|+...
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~---g~~--~~~~~~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEF---CGR--IHTRYSSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TTS--SEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhc---CCe--eEeccCCHHHHHHHHcCCCEEEECC
Confidence 4678999999854 333333333 577 999999998 776665432 321 2222111111110014689998632
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
. .-.. ....-+.....+.+||||+++-
T Consensus 240 ~-~p~~--~t~~li~~~~l~~mk~g~~iV~ 266 (377)
T 2vhw_A 240 L-VPGA--KAPKLVSNSLVAHMKPGAVLVD 266 (377)
T ss_dssp C-CTTS--CCCCCBCHHHHTTSCTTCEEEE
T ss_pred C-cCCC--CCcceecHHHHhcCCCCcEEEE
Confidence 1 1010 0000112344577899999873
No 418
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=87.10 E-value=2 Score=38.05 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=47.3
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEe-cHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVE-CSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD-~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..++++|-.|++.| .++..+++.|+ +|+.++ .+. ..+...+.+...+ .++.++.+|+.+...
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999998776 24445555677 777664 444 5555555555554 458899999876431
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..+++|++|.+.
T Consensus 102 ~~g~iD~lvnnA 113 (267)
T 3u5t_A 102 AFGGVDVLVNNA 113 (267)
T ss_dssp HHSCEEEEEECC
T ss_pred HcCCCCEEEECC
Confidence 014799999864
No 419
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.94 E-value=2.1 Score=39.19 Aligned_cols=88 Identities=17% Similarity=0.143 Sum_probs=56.0
Q ss_pred CCEEEEEcCCC--chHHHHHHHcCCC-EEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-ccCCCCceeEEEEec
Q 016992 123 DKVVLDVGAGT--GILSLFCAKAGAA-HVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-IELPVTKVDIIISEW 197 (379)
Q Consensus 123 ~~~VLDlGcG~--G~~~~~la~~g~~-~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~Iv~~~ 197 (379)
..+|.-||+|. |.++..+++.|.. +|+++|.++ .++.+.+ .|..+ -...+..+ . ....|+|+...
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~---~~~~~~~~~~---~~~aDvVilav 102 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID---EGTTSIAKVE---DFSPDFVMLSS 102 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS---EEESCTTGGG---GGCCSEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc---hhcCCHHHHh---hccCCEEEEeC
Confidence 36899999875 3455555666643 899999998 7766543 34321 12233333 1 14679998643
Q ss_pred CccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 198 MGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 198 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.. .....++..+...|++|..++
T Consensus 103 p~------~~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 103 PV------RTFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp CG------GGHHHHHHHHHHHSCTTCEEE
T ss_pred CH------HHHHHHHHHHhhccCCCcEEE
Confidence 21 345677888888899987765
No 420
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.83 E-value=1.4 Score=40.99 Aligned_cols=83 Identities=20% Similarity=0.205 Sum_probs=50.7
Q ss_pred CCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecH----HHHHHHHHHHHHcCCCCcEEEEEcceeeccCC------CCce
Q 016992 123 DKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECS----QMANMAKQIVEANGFSNVITVLKGKIEEIELP------VTKV 190 (379)
Q Consensus 123 ~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s----~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~~ 190 (379)
|++||-+|+|. |..+..+++ .|+ +|+++|.+ +.++.++ ..|. ..+ | .+ .+. ...+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~----~~ga----~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIE----ETKT----NYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHH----HHTC----EEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHH----HhCC----cee--c-hH-HHHHHHHHhCCCC
Confidence 99999999843 455555665 577 99999986 3334443 3343 122 2 22 111 1469
Q ss_pred eEEEEecCccccCChhhHHHHH-HHHHhcccCCEEEEe
Q 016992 191 DIIISEWMGYFLLFENMLNTVL-YARDKWLVDDGIVLP 227 (379)
Q Consensus 191 D~Iv~~~~~~~l~~~~~~~~~l-~~~~~~LkpgG~lip 227 (379)
|+|+... +. ...+ ....+.|+++|.++.
T Consensus 248 d~vid~~-g~--------~~~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 248 DVIIDAT-GA--------DVNILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp EEEEECC-CC--------CTHHHHHHGGGEEEEEEEEE
T ss_pred CEEEECC-CC--------hHHHHHHHHHHHhcCCEEEE
Confidence 9998542 11 1134 667789999999874
No 421
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=86.54 E-value=0.75 Score=41.52 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=47.2
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCc--hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTG--ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL 185 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G--~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~ 185 (379)
-|...+........+++||-+|+|.- ..+..+++.|+.+|+.++.+. ..+...+.+...+..-.+... +..++..
T Consensus 113 G~~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~--~~~~l~~ 190 (283)
T 3jyo_A 113 GFGRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGV--DARGIED 190 (283)
T ss_dssp HHHHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE--CSTTHHH
T ss_pred HHHHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEc--CHHHHHH
Confidence 34444544333467889999999621 223344456888999999987 655444444432211123322 2222211
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
....+|+||...
T Consensus 191 ~l~~~DiVInaT 202 (283)
T 3jyo_A 191 VIAAADGVVNAT 202 (283)
T ss_dssp HHHHSSEEEECS
T ss_pred HHhcCCEEEECC
Confidence 114689999753
No 422
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.45 E-value=1.7 Score=42.51 Aligned_cols=85 Identities=28% Similarity=0.260 Sum_probs=51.3
Q ss_pred CCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 120 LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 120 ~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
..+|++|+-+|+|. |.....+++ .|+ +|+++|.++ .+..|++ .|. .+ .+..++ + ..+|+|+..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e~-l--~~aDvVi~a 336 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMM----EGF----DV--VTVEEA-I--GDADIVVTA 336 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC----EE--CCHHHH-G--GGCSEEEEC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC----EE--ecHHHH-H--hCCCEEEEC
Confidence 56899999999864 433333344 576 999999998 6665543 343 22 233332 1 468999964
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.-...+ +. ....+.+|+||+++
T Consensus 337 tgt~~~-----i~---~~~l~~mk~ggilv 358 (494)
T 3ce6_A 337 TGNKDI-----IM---LEHIKAMKDHAILG 358 (494)
T ss_dssp SSSSCS-----BC---HHHHHHSCTTCEEE
T ss_pred CCCHHH-----HH---HHHHHhcCCCcEEE
Confidence 211111 11 13446689999987
No 423
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=85.74 E-value=2.7 Score=36.97 Aligned_cols=73 Identities=25% Similarity=0.294 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHH----cCCCEEEEEecH---H-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-------
Q 016992 121 FKDKVVLDVGAGTGILSLFCAK----AGAAHVYAVECS---Q-MANMAKQIVEANGFSNVITVLKGKIEEIEL------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~----~g~~~v~~vD~s---~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------- 185 (379)
..+++||-.|++.| ++..+++ .|+ +|+.++.+ . .++.+.+.+...+ .++.++.+|+.+...
T Consensus 9 l~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~ 84 (262)
T 3ksu_A 9 LKNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG--AKVALYQSDLSNEEEVAKLFDF 84 (262)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT--CEEEEEECCCCSHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHH
Confidence 46789999998765 4444444 465 88887643 3 4444444444433 468999999876431
Q ss_pred ---CCCceeEEEEec
Q 016992 186 ---PVTKVDIIISEW 197 (379)
Q Consensus 186 ---~~~~~D~Iv~~~ 197 (379)
..++.|++|.+.
T Consensus 85 ~~~~~g~iD~lvnnA 99 (262)
T 3ksu_A 85 AEKEFGKVDIAINTV 99 (262)
T ss_dssp HHHHHCSEEEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 014789999864
No 424
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.52 E-value=0.85 Score=42.72 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----CCCCcee
Q 016992 121 FKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKVD 191 (379)
Q Consensus 121 ~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D 191 (379)
.+|.+||-+|++ .|.++..+|+ .|+ +|+++. ++ .++.+++ .|.. .++...-.++. ...+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKS----RGAE---EVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS---EEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHH----cCCc---EEEECCCchHHHHHHHHccCCcc
Confidence 788999999984 5788888888 576 888885 67 7766654 4542 22322111110 1124599
Q ss_pred EEEEecCccccCChhhHHHHHHHHHhcc-cCCEEEEe
Q 016992 192 IIISEWMGYFLLFENMLNTVLYARDKWL-VDDGIVLP 227 (379)
Q Consensus 192 ~Iv~~~~~~~l~~~~~~~~~l~~~~~~L-kpgG~lip 227 (379)
+|+-. ++ . ...+....+.| ++||+++.
T Consensus 234 ~v~d~-~g----~----~~~~~~~~~~l~~~~G~iv~ 261 (371)
T 3gqv_A 234 YALDC-IT----N----VESTTFCFAAIGRAGGHYVS 261 (371)
T ss_dssp EEEES-SC----S----HHHHHHHHHHSCTTCEEEEE
T ss_pred EEEEC-CC----c----hHHHHHHHHHhhcCCCEEEE
Confidence 99842 21 1 23445556677 69999874
No 425
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=85.52 E-value=1.9 Score=37.83 Aligned_cols=74 Identities=18% Similarity=0.108 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C----C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----V 187 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----~ 187 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.+. .++.+.+.+...+ .++.++.+|+.+... . .
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAH 81 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhh
Confidence 46789999998876 23444555676 899999988 7777666666654 468999999876431 0 1
Q ss_pred CceeEEEEec
Q 016992 188 TKVDIIISEW 197 (379)
Q Consensus 188 ~~~D~Iv~~~ 197 (379)
+.+|++|.+.
T Consensus 82 g~id~lv~nA 91 (252)
T 3h7a_A 82 APLEVTIFNV 91 (252)
T ss_dssp SCEEEEEECC
T ss_pred CCceEEEECC
Confidence 4789999864
No 426
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.36 E-value=2.3 Score=35.13 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCC-c-hHHHHHHHc-CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----C-CCCceeE
Q 016992 122 KDKVVLDVGAGT-G-ILSLFCAKA-GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----L-PVTKVDI 192 (379)
Q Consensus 122 ~~~~VLDlGcG~-G-~~~~~la~~-g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~-~~~~~D~ 192 (379)
.+.+|+-+|+|. | .++..+.+. |. .|+++|.++ .++.+++ .| +.++.+|..+.. . ....+|+
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----EG----RNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----TT----CCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----CC----CCEEEcCCCCHHHHHhccCCCCCCE
Confidence 356899998864 3 223333445 65 899999998 7665543 33 456677765421 1 2356899
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
|+.... .......++. ..+.+.|++.++
T Consensus 109 vi~~~~-----~~~~~~~~~~-~~~~~~~~~~ii 136 (183)
T 3c85_A 109 VLLAMP-----HHQGNQTALE-QLQRRNYKGQIA 136 (183)
T ss_dssp EEECCS-----SHHHHHHHHH-HHHHTTCCSEEE
T ss_pred EEEeCC-----ChHHHHHHHH-HHHHHCCCCEEE
Confidence 986321 1122222222 344556666666
No 427
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=84.94 E-value=5 Score=36.00 Aligned_cols=80 Identities=19% Similarity=0.233 Sum_probs=45.6
Q ss_pred HHHHHHhccCCCCCCEEEEEcCCCc--hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCC
Q 016992 110 YQNVIYQNKFLFKDKVVLDVGAGTG--ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELP 186 (379)
Q Consensus 110 ~~~~i~~~~~~~~~~~VLDlGcG~G--~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~ 186 (379)
|...+........+++||-+|+|.- ..+..+++.|+.+|+.++.+. ..+...+.+...+ .+... +..++.
T Consensus 113 ~~~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~---~~~~~--~~~~l~-- 185 (281)
T 3o8q_A 113 LVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG---EVKAQ--AFEQLK-- 185 (281)
T ss_dssp HHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS---CEEEE--EGGGCC--
T ss_pred HHHHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC---CeeEe--eHHHhc--
Confidence 3444443333457889999998721 122233445777999999887 5444433333222 24444 333332
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
..+|+||+..
T Consensus 186 -~~aDiIInaT 195 (281)
T 3o8q_A 186 -QSYDVIINST 195 (281)
T ss_dssp -SCEEEEEECS
T ss_pred -CCCCEEEEcC
Confidence 6799999753
No 428
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.84 E-value=3.2 Score=36.48 Aligned_cols=74 Identities=23% Similarity=0.302 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.+. .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999998876 34445555676 899999988 7777766666655 468999999876431 1
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+++|++|.+.
T Consensus 86 ~g~id~lv~nA 96 (264)
T 3ucx_A 86 YGRVDVVINNA 96 (264)
T ss_dssp TSCCSEEEECC
T ss_pred cCCCcEEEECC
Confidence 25789999864
No 429
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=84.70 E-value=5.7 Score=40.82 Aligned_cols=101 Identities=20% Similarity=0.263 Sum_probs=68.2
Q ss_pred CEEEEEcCCCc--hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc-----------C---CCCcEEEEEcceeeccCC
Q 016992 124 KVVLDVGAGTG--ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN-----------G---FSNVITVLKGKIEEIELP 186 (379)
Q Consensus 124 ~~VLDlGcG~G--~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~-----------~---~~~~i~~~~~d~~~~~~~ 186 (379)
++|--||+|+- .++..++..|. .|+.+|+++ .++.+++.+... . ...++.+ ..|..++
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEE-ESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcc-cCcHHHH---
Confidence 58999999983 56666677776 999999999 888887766432 0 1122322 2233322
Q ss_pred CCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCceEE
Q 016992 187 VTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASLYL 234 (379)
Q Consensus 187 ~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~~ 234 (379)
...|+||=. + .........++.++..+++|+.+|--++-++-+
T Consensus 392 -~~aDlVIEA-V---~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i 434 (742)
T 3zwc_A 392 -STVDLVVEA-V---FEDMNLKKKVFAELSALCKPGAFLCTNTSALNV 434 (742)
T ss_dssp -GSCSEEEEC-C---CSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCH
T ss_pred -hhCCEEEEe-c---cccHHHHHHHHHHHhhcCCCCceEEecCCcCCh
Confidence 457988843 2 344466789999999999999988766555433
No 430
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=84.69 E-value=2.9 Score=36.37 Aligned_cols=74 Identities=20% Similarity=0.312 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..+++||-.|++.| .++..+++.|+ +|+.+|.+. .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999997665 23444445576 899999998 7777666666554 468899999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 84 ~g~id~li~~A 94 (253)
T 3qiv_A 84 FGGIDYLVNNA 94 (253)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 431
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=84.56 E-value=3 Score=37.36 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCCchHHHH----HHHcCC--CEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---------
Q 016992 122 KDKVVLDVGAGTGILSLF----CAKAGA--AHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~----la~~g~--~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (379)
.+++||-.|++.| ++.. +++.|+ .+|+.++.+. .++.+.+.+....-..++.++.+|+.+...
T Consensus 32 ~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 5789999998765 3333 344454 3899999988 776666656553222468899999876531
Q ss_pred -CCCceeEEEEec
Q 016992 186 -PVTKVDIIISEW 197 (379)
Q Consensus 186 -~~~~~D~Iv~~~ 197 (379)
..+.+|++|.+.
T Consensus 111 ~~~g~iD~lVnnA 123 (287)
T 3rku_A 111 QEFKDIDILVNNA 123 (287)
T ss_dssp GGGCSCCEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 124789999864
No 432
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=84.49 E-value=0.48 Score=44.01 Aligned_cols=95 Identities=14% Similarity=0.109 Sum_probs=54.7
Q ss_pred HHhccCCCCCCEEEEEcCC--CchHHHHHHH-cCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeecc-----C
Q 016992 114 IYQNKFLFKDKVVLDVGAG--TGILSLFCAK-AGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE-----L 185 (379)
Q Consensus 114 i~~~~~~~~~~~VLDlGcG--~G~~~~~la~-~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~ 185 (379)
+.+.....+|.+||-.|++ .|.++..+|+ .|..+|++++.....+.++ .|.. .++..+ .++. .
T Consensus 134 l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~~~~~~~~-----~ga~---~~~~~~-~~~~~~~~~~ 204 (349)
T 4a27_A 134 LFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK-----DSVT---HLFDRN-ADYVQEVKRI 204 (349)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECGGGHHHHG-----GGSS---EEEETT-SCHHHHHHHH
T ss_pred HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHH-----cCCc---EEEcCC-ccHHHHHHHh
Confidence 3344567899999999983 3677777777 4667999998443444443 3432 222211 1110 1
Q ss_pred CCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 186 PVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 186 ~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
..+.+|+|+-.. +. . .+....+.|+++|+++.
T Consensus 205 ~~~g~Dvv~d~~-g~-----~----~~~~~~~~l~~~G~~v~ 236 (349)
T 4a27_A 205 SAEGVDIVLDCL-CG-----D----NTGKGLSLLKPLGTYIL 236 (349)
T ss_dssp CTTCEEEEEEEC-C----------------CTTEEEEEEEEE
T ss_pred cCCCceEEEECC-Cc-----h----hHHHHHHHhhcCCEEEE
Confidence 135799998532 11 1 12556689999999873
No 433
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=84.41 E-value=2.1 Score=33.60 Aligned_cols=63 Identities=16% Similarity=0.237 Sum_probs=42.1
Q ss_pred CCEEEEEcCCCchHHHHHHH----cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----CCCCceeEE
Q 016992 123 DKVVLDVGAGTGILSLFCAK----AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDII 193 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~----~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~I 193 (379)
.++|+-+|+|. ++..+++ .|. +|+++|.++ .++.+++ .+ +.++.+|..+.. .....+|+|
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~~~~~~d~v 74 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGK-KVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSLDLEGVSAV 74 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHSCCTTCSEE
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCC-eEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhCCcccCCEE
Confidence 45789999854 4444443 465 899999998 7766653 22 577888876642 123578998
Q ss_pred EEe
Q 016992 194 ISE 196 (379)
Q Consensus 194 v~~ 196 (379)
+..
T Consensus 75 i~~ 77 (141)
T 3llv_A 75 LIT 77 (141)
T ss_dssp EEC
T ss_pred EEe
Confidence 864
No 434
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=84.30 E-value=4.4 Score=36.50 Aligned_cols=96 Identities=19% Similarity=0.294 Sum_probs=58.7
Q ss_pred CEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH-------cCC-C-------------CcEEEEEcc
Q 016992 124 KVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA-------NGF-S-------------NVITVLKGK 179 (379)
Q Consensus 124 ~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~-------~~~-~-------------~~i~~~~~d 179 (379)
++|.-||+|. | .++..+++.|. +|+.+|.++ .++.+++.+.. .|. . .++++. .|
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~~-~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS-TD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE-SC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEEe-cC
Confidence 5799999986 3 35666677776 999999998 87776543321 221 0 124432 23
Q ss_pred eeeccCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 180 IEEIELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 180 ~~~~~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
..+. + ...|+||.... ........++..+...++|+..++-.
T Consensus 94 ~~~~-~--~~aD~Vi~avp----~~~~~~~~v~~~l~~~~~~~~iv~s~ 135 (302)
T 1f0y_A 94 AASV-V--HSTDLVVEAIV----ENLKVKNELFKRLDKFAAEHTIFASN 135 (302)
T ss_dssp HHHH-T--TSCSEEEECCC----SCHHHHHHHHHHHTTTSCTTCEEEEC
T ss_pred HHHh-h--cCCCEEEEcCc----CcHHHHHHHHHHHHhhCCCCeEEEEC
Confidence 3211 1 46799986432 11123467778888888888766533
No 435
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.27 E-value=3.3 Score=36.63 Aligned_cols=74 Identities=18% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCchHHHHHH----HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 122 KDKVVLDVGAGTGILSLFCA----KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la----~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
.+++||-.|++. .++..++ +.|+ +|++++.++ .++...+.+...+...++.++.+|+.+... .
T Consensus 31 ~~k~vlVTGasg-gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASG-GIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 577899998655 4444444 4565 899999988 766666666666655568889999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|+||...
T Consensus 109 ~g~iD~vi~~A 119 (279)
T 1xg5_A 109 HSGVDICINNA 119 (279)
T ss_dssp HCCCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 13689999753
No 436
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.17 E-value=4.4 Score=36.18 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=59.8
Q ss_pred CEEEEEcCCC--chHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHc---------CCC--------CcEEEEEcceeec
Q 016992 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEAN---------GFS--------NVITVLKGKIEEI 183 (379)
Q Consensus 124 ~~VLDlGcG~--G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~---------~~~--------~~i~~~~~d~~~~ 183 (379)
++|.-||+|. +.++..+++.|. +|+.+|.++ .++.+.+.+... ++. .++.+ ..|..+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4788899886 244555666676 999999999 888776653221 110 11232 2233222
Q ss_pred cCCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecC
Q 016992 184 ELPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDK 229 (379)
Q Consensus 184 ~~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~ 229 (379)
-...|+|+.... ........++..+...++|+..++-.+
T Consensus 83 ---~~~aDlVi~av~----~~~~~~~~v~~~l~~~~~~~~il~s~t 121 (283)
T 4e12_A 83 ---VKDADLVIEAVP----ESLDLKRDIYTKLGELAPAKTIFATNS 121 (283)
T ss_dssp ---TTTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred ---hccCCEEEEecc----CcHHHHHHHHHHHHhhCCCCcEEEECC
Confidence 146899986432 222356678888888899988776333
No 437
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.02 E-value=3 Score=38.05 Aligned_cols=76 Identities=18% Similarity=0.208 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCCch---HHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTGI---LSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~---~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..+++||-.|++.|+ ++..+++.|+ +|++++.+. .++.+.+.+...+...++.++.+|+.+... .
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 467899999987652 3344445576 899999998 777776666665543469999999876430 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 85 ~g~id~lv~nA 95 (319)
T 3ioy_A 85 FGPVSILCNNA 95 (319)
T ss_dssp TCCEEEEEECC
T ss_pred CCCCCEEEECC
Confidence 25789999864
No 438
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.75 E-value=4.1 Score=36.20 Aligned_cols=73 Identities=25% Similarity=0.330 Sum_probs=46.2
Q ss_pred CCCCEEEEEcCCCchHHHHH----HHcCCCEEEEEecHH--HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C---
Q 016992 121 FKDKVVLDVGAGTGILSLFC----AKAGAAHVYAVECSQ--MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~l----a~~g~~~v~~vD~s~--~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (379)
..+++||-.|++.| ++..+ ++.|+ +|++++.+. ..+.+.+.+...+ .++.++.+|+.+... .
T Consensus 27 ~~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 27 LEGKVALVTGAGRG-IGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHH
Confidence 35678998887654 44444 44566 899988764 3444444455444 358889988865420 0
Q ss_pred --CCceeEEEEec
Q 016992 187 --VTKVDIIISEW 197 (379)
Q Consensus 187 --~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 103 ~~~g~iD~lv~~A 115 (283)
T 1g0o_A 103 KIFGKLDIVCSNS 115 (283)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 14689999864
No 439
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.56 E-value=4.7 Score=38.96 Aligned_cols=98 Identities=12% Similarity=0.176 Sum_probs=61.1
Q ss_pred CEEEEEcCCC--chHHHHHHHcCCCEEEEEecHH-H-HHHHHHHHH---HcC-CC--------CcEEEEEcceeeccCCC
Q 016992 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-M-ANMAKQIVE---ANG-FS--------NVITVLKGKIEEIELPV 187 (379)
Q Consensus 124 ~~VLDlGcG~--G~~~~~la~~g~~~v~~vD~s~-~-~~~a~~~~~---~~~-~~--------~~i~~~~~d~~~~~~~~ 187 (379)
++|.-||+|+ +.++..+++.|. .|+.+|.++ . ....++++. ..| ++ .++++. .|... +
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t-~dl~a--l-- 128 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKIT-SDFHK--L-- 128 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEE-SCGGG--C--
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEe-CCHHH--H--
Confidence 5899999997 366677777776 999999987 3 333322222 222 11 235443 23332 2
Q ss_pred CceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 188 TKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 188 ~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
...|+||...+ ........++..+...++|+.+++-.+.+
T Consensus 129 ~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~aIlasnTSs 168 (460)
T 3k6j_A 129 SNCDLIVESVI----EDMKLKKELFANLENICKSTCIFGTNTSS 168 (460)
T ss_dssp TTCSEEEECCC----SCHHHHHHHHHHHHTTSCTTCEEEECCSS
T ss_pred ccCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCCEEEecCCC
Confidence 56899996432 22234567888899999999888754444
No 440
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=83.43 E-value=3.1 Score=36.48 Aligned_cols=74 Identities=20% Similarity=0.289 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.+|.+. .++...+.+...+ .++.++.+|+.+... .
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQ 86 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789999998765 23444555676 899999988 7777666666655 458999999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+++|++|.+.
T Consensus 87 ~g~id~lv~nA 97 (256)
T 3gaf_A 87 FGKITVLVNNA 97 (256)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 441
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.28 E-value=0.71 Score=43.34 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHH----cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLFCAK----AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la~----~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
.++++|+-+|+| .++..+++ .|+ +|+++|.++ .++.+++. .+. .+.....+..++...-..+|+|+.
T Consensus 164 l~~~~V~ViGaG--~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~---~g~--~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 164 VAPASVVILGGG--TVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDV---FGG--RVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp BCCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH---TTT--SEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCC--HHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh---cCc--eEEEecCCHHHHHHHHhCCCEEEE
Confidence 356899999985 44444333 576 999999998 76665432 232 233222222222100146899986
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
... .........+.+...+.+++||.++-
T Consensus 236 ~~g---~~~~~~~~li~~~~l~~mk~gg~iV~ 264 (369)
T 2eez_A 236 AVL---VPGAKAPKLVTRDMLSLMKEGAVIVD 264 (369)
T ss_dssp CCC----------CCSCHHHHTTSCTTCEEEE
T ss_pred CCC---CCccccchhHHHHHHHhhcCCCEEEE
Confidence 431 11000001123455677899998873
No 442
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.17 E-value=3.4 Score=36.25 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCCchHHHHH----HHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C---
Q 016992 120 LFKDKVVLDVGAGTGILSLFC----AKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P--- 186 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~l----a~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~--- 186 (379)
...+++||-.|++.| ++..+ ++.|+ +|+.++.+. .++...+.+...+ .++.++.+|+.+... .
T Consensus 26 ~l~~k~vlITGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~ 101 (262)
T 3rkr_A 26 SLSGQVAVVTGASRG-IGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVL 101 (262)
T ss_dssp TTTTCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHH
Confidence 356789999987654 44444 44576 899999998 7777766666655 468999999876431 0
Q ss_pred --CCceeEEEEec
Q 016992 187 --VTKVDIIISEW 197 (379)
Q Consensus 187 --~~~~D~Iv~~~ 197 (379)
.+++|++|...
T Consensus 102 ~~~g~id~lv~~A 114 (262)
T 3rkr_A 102 AAHGRCDVLVNNA 114 (262)
T ss_dssp HHHSCCSEEEECC
T ss_pred HhcCCCCEEEECC
Confidence 14689999864
No 443
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.10 E-value=3.6 Score=37.08 Aligned_cols=74 Identities=16% Similarity=0.227 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
..+++||-.|++.| .++..+++.|+ +|++++.+. .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 56889999998865 23444455576 899999998 7777766666655 358999999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 106 ~g~id~lvnnA 116 (301)
T 3tjr_A 106 LGGVDVVFSNA 116 (301)
T ss_dssp HSSCSEEEECC
T ss_pred CCCCCEEEECC
Confidence 14789999864
No 444
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=82.56 E-value=4.3 Score=38.24 Aligned_cols=68 Identities=15% Similarity=0.266 Sum_probs=43.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHc--------CCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeE
Q 016992 122 KDKVVLDVGAGTGILSLFCAKA--------GAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDI 192 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~la~~--------g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~ 192 (379)
..-.|+|+|+|+|.++..+.+. ...+++.||+|+ ..+.-++.+... ++|.+.. ++.+++ ...-+
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~---~~v~W~~-~l~~lp---~~~~~ 152 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI---RNIHWHD-SFEDVP---EGPAV 152 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC---SSEEEES-SGGGSC---CSSEE
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC---CCeEEeC-ChhhcC---CCCeE
Confidence 3447999999999998877652 124899999999 666444444322 2576653 344443 12456
Q ss_pred EEEe
Q 016992 193 IISE 196 (379)
Q Consensus 193 Iv~~ 196 (379)
|+++
T Consensus 153 viAN 156 (387)
T 1zkd_A 153 ILAN 156 (387)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6664
No 445
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=82.37 E-value=3.5 Score=36.49 Aligned_cols=73 Identities=18% Similarity=0.184 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------CC
Q 016992 122 KDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------PV 187 (379)
Q Consensus 122 ~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~~ 187 (379)
.++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4678999888765 23344455576 899999998 7777766666655 468888899876431 01
Q ss_pred CceeEEEEec
Q 016992 188 TKVDIIISEW 197 (379)
Q Consensus 188 ~~~D~Iv~~~ 197 (379)
+.+|++|.+.
T Consensus 80 g~iD~lVnnA 89 (264)
T 3tfo_A 80 GRIDVLVNNA 89 (264)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4789999864
No 446
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=82.35 E-value=0.37 Score=45.41 Aligned_cols=40 Identities=28% Similarity=0.403 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHH
Q 016992 122 KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQ 162 (379)
Q Consensus 122 ~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~ 162 (379)
++.+|+-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 678999999985 444444444 587 899999998 7777654
No 447
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=82.21 E-value=3.1 Score=37.19 Aligned_cols=74 Identities=20% Similarity=0.248 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
.++++||-.|++.| .++..+++.|+ +|+.++.+. .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLK 102 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46789999998765 23344455576 999999988 7666655554433 468899999876420 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 103 ~g~iD~lVnnA 113 (283)
T 3v8b_A 103 FGHLDIVVANA 113 (283)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 24789999864
No 448
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=82.04 E-value=2.3 Score=39.52 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=34.7
Q ss_pred cCCCCCCEEEEEcCCC-chHHHHHHH-c-CCCEEEEEecHH-HHHHHHH
Q 016992 118 KFLFKDKVVLDVGAGT-GILSLFCAK-A-GAAHVYAVECSQ-MANMAKQ 162 (379)
Q Consensus 118 ~~~~~~~~VLDlGcG~-G~~~~~la~-~-g~~~v~~vD~s~-~~~~a~~ 162 (379)
....+|.+||-+|+|. |.++..+|+ . |+ +|+++|.++ .++.+++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER 229 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH
Confidence 4567899999999863 566667777 5 76 899999998 8877754
No 449
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=81.87 E-value=0.46 Score=45.18 Aligned_cols=40 Identities=23% Similarity=0.344 Sum_probs=30.0
Q ss_pred CCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHH
Q 016992 122 KDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQ 162 (379)
Q Consensus 122 ~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~ 162 (379)
++.+|+-+|+|. |..+..+++ .|+ +|+++|.++ .++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 578999999985 444444444 577 899999999 7777654
No 450
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=81.53 E-value=3.9 Score=35.86 Aligned_cols=75 Identities=20% Similarity=0.288 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-CCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGA-GTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGc-G~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..+++||-.|+ |.| .++..+++.|+ +|+.++.+. .++.+.+.+...+- .++.++.+|+.+...
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGL-GRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCS-SCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC-CceEEEEeCCCCHHHHHHHHHHHHH
Confidence 45789999998 565 34555566676 899999988 77666666654432 469999999876431
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..+++|++|.+.
T Consensus 98 ~~g~id~li~~A 109 (266)
T 3o38_A 98 KAGRLDVLVNNA 109 (266)
T ss_dssp HHSCCCEEEECC
T ss_pred HhCCCcEEEECC
Confidence 014789999864
No 451
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=81.29 E-value=4.2 Score=35.15 Aligned_cols=73 Identities=27% Similarity=0.287 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----------CCC
Q 016992 122 KDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----------LPV 187 (379)
Q Consensus 122 ~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 187 (379)
.+++||-.|++.| .++..+++.|+ +|++++.++ .++...+.+...+ .++.++.+|+.+.. ...
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5678999887655 23444445576 899999998 7777776676665 35899999987643 012
Q ss_pred CceeEEEEec
Q 016992 188 TKVDIIISEW 197 (379)
Q Consensus 188 ~~~D~Iv~~~ 197 (379)
+++|++|...
T Consensus 81 ~~id~li~~A 90 (247)
T 3lyl_A 81 LAIDILVNNA 90 (247)
T ss_dssp CCCSEEEECC
T ss_pred CCCCEEEECC
Confidence 5689999864
No 452
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=80.93 E-value=6 Score=34.85 Aligned_cols=74 Identities=15% Similarity=0.147 Sum_probs=50.4
Q ss_pred CCCCCEEEEEcCCCchHHHHHH----HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---------
Q 016992 120 LFKDKVVLDVGAGTGILSLFCA----KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL--------- 185 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G~~~~~la----~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~--------- 185 (379)
...+++||-.|++. .++..++ +.|. +|++++.++ .++...+.+...+ .++.++.+|+.+...
T Consensus 28 ~l~~k~vlITGasg-gIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~ 103 (272)
T 1yb1_A 28 SVTGEIVLITGAGH-GIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVK 103 (272)
T ss_dssp CCTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCc-hHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHH
Confidence 35678999998765 4555444 4465 899999988 6666655565544 458999999876420
Q ss_pred -CCCceeEEEEec
Q 016992 186 -PVTKVDIIISEW 197 (379)
Q Consensus 186 -~~~~~D~Iv~~~ 197 (379)
..+.+|+||...
T Consensus 104 ~~~g~iD~li~~A 116 (272)
T 1yb1_A 104 AEIGDVSILVNNA 116 (272)
T ss_dssp HHTCCCSEEEECC
T ss_pred HHCCCCcEEEECC
Confidence 024689999864
No 453
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.88 E-value=8.8 Score=37.29 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=62.8
Q ss_pred CEEEEEcCCC--chHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH-------cCC-C--------CcEEEEEcceeecc
Q 016992 124 KVVLDVGAGT--GILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA-------NGF-S--------NVITVLKGKIEEIE 184 (379)
Q Consensus 124 ~~VLDlGcG~--G~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~-------~~~-~--------~~i~~~~~d~~~~~ 184 (379)
++|--||+|. +.++..+++.|. .|+.+|.++ .++.+.+.+.. .|. . .++++. .|...+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~- 82 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPV-TDIHAL- 82 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEE-CCGGGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEe-CCHHHh-
Confidence 3677889986 355666777776 899999999 88887665432 111 0 134433 233222
Q ss_pred CCCCceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEecCCce
Q 016992 185 LPVTKVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLPDKASL 232 (379)
Q Consensus 185 ~~~~~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~ 232 (379)
...|+||.... ........++.++...++|+.+++-.+.++
T Consensus 83 ---~~aDlVIeAVp----e~~~vk~~v~~~l~~~~~~~~IlasntSti 123 (483)
T 3mog_A 83 ---AAADLVIEAAS----ERLEVKKALFAQLAEVCPPQTLLTTNTSSI 123 (483)
T ss_dssp ---GGCSEEEECCC----CCHHHHHHHHHHHHHHSCTTCEEEECCSSS
T ss_pred ---cCCCEEEEcCC----CcHHHHHHHHHHHHHhhccCcEEEecCCCC
Confidence 56799986432 222344678888889999998876544444
No 454
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.87 E-value=3.8 Score=36.38 Aligned_cols=73 Identities=14% Similarity=0.192 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------CC
Q 016992 122 KDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------PV 187 (379)
Q Consensus 122 ~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~~ 187 (379)
.++++|-.|++.| .++..+++.|+ +|++++.+. .++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5789999997765 23444455576 899999988 7776666665544 458999999876431 01
Q ss_pred CceeEEEEec
Q 016992 188 TKVDIIISEW 197 (379)
Q Consensus 188 ~~~D~Iv~~~ 197 (379)
+++|++|.+.
T Consensus 100 g~id~lv~nA 109 (279)
T 3sju_A 100 GPIGILVNSA 109 (279)
T ss_dssp CSCCEEEECC
T ss_pred CCCcEEEECC
Confidence 4789999864
No 455
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=80.75 E-value=3.2 Score=40.36 Aligned_cols=82 Identities=26% Similarity=0.356 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCCCchHHHH----HHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEE
Q 016992 121 FKDKVVLDVGAGTGILSLF----CAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIIS 195 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~----la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~ 195 (379)
..|++|+-+|+| | ++.. ++..|+ +|+.+|.++ ....+.. .+. .+ .+..+. ...+|+|+.
T Consensus 263 L~GKtVvVtGaG-g-IG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~----~g~----dv--~~lee~---~~~aDvVi~ 326 (488)
T 3ond_A 263 IAGKVAVVAGYG-D-VGKGCAAALKQAGA-RVIVTEIDPICALQATM----EGL----QV--LTLEDV---VSEADIFVT 326 (488)
T ss_dssp CTTCEEEEECCS-H-HHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC----EE--CCGGGT---TTTCSEEEE
T ss_pred ccCCEEEEECCC-H-HHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH----hCC----cc--CCHHHH---HHhcCEEEe
Confidence 579999999988 3 3333 334577 999999988 5544432 221 11 233222 256898885
Q ss_pred ecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 196 EWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 196 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.. + .. .. +-....+.+++|+.++
T Consensus 327 at-G--~~--~v---l~~e~l~~mk~gaiVv 349 (488)
T 3ond_A 327 TT-G--NK--DI---IMLDHMKKMKNNAIVC 349 (488)
T ss_dssp CS-S--CS--CS---BCHHHHTTSCTTEEEE
T ss_pred CC-C--Ch--hh---hhHHHHHhcCCCeEEE
Confidence 32 1 10 11 1122346789999877
No 456
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=80.73 E-value=12 Score=28.60 Aligned_cols=87 Identities=14% Similarity=0.154 Sum_probs=47.8
Q ss_pred CCEEEEEcCCCchHHHHHH----HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----CCCCceeEE
Q 016992 123 DKVVLDVGAGTGILSLFCA----KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDII 193 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la----~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~I 193 (379)
+++|+-+|+| .++..++ +.|. +|+++|.++ .++.+++ ..+ +.++.+|..+.. .....+|+|
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~---~~~----~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGH-DIVLIDIDKDICKKASA---EID----ALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH---HCS----SEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHH---hcC----cEEEEcCCCCHHHHHHcCcccCCEE
Confidence 4688998875 4444443 3454 899999988 6654432 222 456667654321 112568999
Q ss_pred EEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 194 ISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 194 v~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
+..... ......+....+.+.++ .++
T Consensus 74 i~~~~~------~~~~~~~~~~~~~~~~~-~ii 99 (140)
T 1lss_A 74 IAVTGK------EEVNLMSSLLAKSYGIN-KTI 99 (140)
T ss_dssp EECCSC------HHHHHHHHHHHHHTTCC-CEE
T ss_pred EEeeCC------chHHHHHHHHHHHcCCC-EEE
Confidence 864311 12223333444556665 444
No 457
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.61 E-value=6.1 Score=34.72 Aligned_cols=73 Identities=21% Similarity=0.256 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHHHHHHHHHHHHHcCCCCcEEEEEcceeecc-----CCCCceeE
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQMANMAKQIVEANGFSNVITVLKGKIEEIE-----LPVTKVDI 192 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~ 192 (379)
.+|+++|--|++.| .++..+++.|+ +|+.+|.+.. +.+.+.+...+ .++.++.+|+.+.. +..+++|+
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~-~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDi 82 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP-DETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDI 82 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC-HHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH-HHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCE
Confidence 57899999998887 34555666677 8999998641 12223344555 45888999987643 22467999
Q ss_pred EEEec
Q 016992 193 IISEW 197 (379)
Q Consensus 193 Iv~~~ 197 (379)
+|.+.
T Consensus 83 LVNNA 87 (247)
T 4hp8_A 83 LVNNA 87 (247)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99864
No 458
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=80.52 E-value=6.4 Score=35.91 Aligned_cols=59 Identities=19% Similarity=0.126 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCCchHHHH----HHHcCCCEEEEEe-cHH-HHHHHHHHHH-HcCCCCcEEEEEcceeecc
Q 016992 122 KDKVVLDVGAGTGILSLF----CAKAGAAHVYAVE-CSQ-MANMAKQIVE-ANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 122 ~~~~VLDlGcG~G~~~~~----la~~g~~~v~~vD-~s~-~~~~a~~~~~-~~~~~~~i~~~~~d~~~~~ 184 (379)
.+++||-.|++.| ++.. +++.|+ +|+.++ .++ .++.+.+.+. ..+ .++.++.+|+.+..
T Consensus 45 ~~k~~lVTGas~G-IG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAAKR-LGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP--NSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST--TCEEEEECCCSSSC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcC--CeEEEEEeeCCCch
Confidence 5678998887654 4444 444576 899999 877 6665555554 333 45889999987654
No 459
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.12 E-value=4 Score=35.30 Aligned_cols=73 Identities=16% Similarity=0.221 Sum_probs=48.5
Q ss_pred CCCCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc------CCCC
Q 016992 119 FLFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPVT 188 (379)
Q Consensus 119 ~~~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~ 188 (379)
...++++||-.|++.| .++..+++.|+ +|+.++.+. .++...+.+. .++.++.+|+.+.. ...+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 83 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTS 83 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCS
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcC
Confidence 3467889999988765 23344445575 899999988 6665544332 45888888886542 1124
Q ss_pred ceeEEEEec
Q 016992 189 KVDIIISEW 197 (379)
Q Consensus 189 ~~D~Iv~~~ 197 (379)
.+|++|...
T Consensus 84 ~id~li~~A 92 (249)
T 3f9i_A 84 NLDILVCNA 92 (249)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 789999764
No 460
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=80.08 E-value=5.5 Score=34.95 Aligned_cols=75 Identities=12% Similarity=0.061 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH-cCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA-NGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~-~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+.. .+- .++.++.+|+.+...
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPG-ARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCC-ceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 46789999998776 33444555676 899999988 77666655554 332 348899999876431
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..++.|++|.+.
T Consensus 84 ~~g~id~lvnnA 95 (265)
T 3lf2_A 84 TLGCASILVNNA 95 (265)
T ss_dssp HHCSCSEEEECC
T ss_pred HcCCCCEEEECC
Confidence 014789999864
No 461
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=80.03 E-value=4.8 Score=35.06 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~---------- 185 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+....-. .++.++.+|+.+...
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 45789999998765 33444555677 899999988 776666655544211 457889999876431
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..+++|++|.+.
T Consensus 84 ~~g~iD~lvnnA 95 (250)
T 3nyw_A 84 KYGAVDILVNAA 95 (250)
T ss_dssp HHCCEEEEEECC
T ss_pred hcCCCCEEEECC
Confidence 014789999864
No 462
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=79.75 E-value=5.6 Score=35.70 Aligned_cols=74 Identities=22% Similarity=0.334 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH------------H-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS------------Q-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s------------~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
..++++|-.|++.| .++..+++.|+ +|+++|.+ . .++.+.+.+...+ .++.++.+|+.+..
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFD 102 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHH
Confidence 56889999998876 23444555676 89999876 5 5555555555554 46899999987643
Q ss_pred C----------CCCceeEEEEec
Q 016992 185 L----------PVTKVDIIISEW 197 (379)
Q Consensus 185 ~----------~~~~~D~Iv~~~ 197 (379)
. ..+..|++|.+.
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nA 125 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANA 125 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHhCCCCEEEECC
Confidence 1 024789999764
No 463
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=79.65 E-value=11 Score=33.53 Aligned_cols=89 Identities=19% Similarity=0.178 Sum_probs=53.3
Q ss_pred CEEEEEcCCCc--hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEE--------cceeec-cCCC--Cc
Q 016992 124 KVVLDVGAGTG--ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLK--------GKIEEI-ELPV--TK 189 (379)
Q Consensus 124 ~~VLDlGcG~G--~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~--------~d~~~~-~~~~--~~ 189 (379)
.+|.-||+|.- .++..+++.|. +|+.+|.++ .++.+++. | +.+.. .++... .... ..
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----G----LIADFNGEEVVANLPIFSPEEIDHQNEQ 74 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----C----EEEEETTEEEEECCCEECGGGCCTTSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----C----EEEEeCCCeeEecceeecchhhcccCCC
Confidence 47899999752 34445555665 899999988 66655432 3 22221 111111 1111 26
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+|+.... ......++..+...++++..++.
T Consensus 75 ~d~vi~~v~------~~~~~~v~~~l~~~l~~~~~iv~ 106 (316)
T 2ew2_A 75 VDLIIALTK------AQQLDAMFKAIQPMITEKTYVLC 106 (316)
T ss_dssp CSEEEECSC------HHHHHHHHHHHGGGCCTTCEEEE
T ss_pred CCEEEEEec------cccHHHHHHHHHHhcCCCCEEEE
Confidence 899986432 13457788888888988877764
No 464
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=79.59 E-value=6 Score=34.31 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCCchHHHHHH----HcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C----
Q 016992 121 FKDKVVLDVGAGTGILSLFCA----KAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P---- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~la----~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~---- 186 (379)
..+++||-.|++. .++..++ +.|+ +|++++.++ .++...+.+...+ .++.++.+|+.+... .
T Consensus 11 l~~k~vlItGasg-giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 11 LDNRVAIVTGGAQ-NIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CTTCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHH
Confidence 3578899998765 4444444 4565 899999987 6665555555544 458999999876431 0
Q ss_pred -CCceeEEEEec
Q 016992 187 -VTKVDIIISEW 197 (379)
Q Consensus 187 -~~~~D~Iv~~~ 197 (379)
.+.+|+||...
T Consensus 87 ~~~~id~vi~~A 98 (260)
T 3awd_A 87 QEGRVDILVACA 98 (260)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 13689999753
No 465
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=79.57 E-value=9.4 Score=36.65 Aligned_cols=85 Identities=24% Similarity=0.244 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 120 LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 120 ~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
...|++|+-+|+|. |......++ .|+ +|+++|.++ ....+. ..| +++. ++.++ + ...|+|+..
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~----~~G----~~vv--~LeEl-L--~~ADIVv~a 309 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAA----MDG----FEVV--TLDDA-A--STADIVVTT 309 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHH----HTT----CEEC--CHHHH-G--GGCSEEEEC
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHH----hcC----ceec--cHHHH-H--hhCCEEEEC
Confidence 46899999999885 433333333 576 999999988 443332 223 2332 33333 1 468998863
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.-...+.. .+....+|+|++++
T Consensus 310 tgt~~lI~--------~e~l~~MK~GAILI 331 (464)
T 3n58_A 310 TGNKDVIT--------IDHMRKMKDMCIVG 331 (464)
T ss_dssp CSSSSSBC--------HHHHHHSCTTEEEE
T ss_pred CCCccccC--------HHHHhcCCCCeEEE
Confidence 21111111 23346789999887
No 466
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=79.34 E-value=4.7 Score=35.46 Aligned_cols=76 Identities=20% Similarity=0.217 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC------CCCce
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL------PVTKV 190 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~ 190 (379)
..++++|-.|++.| .++..+++.|+ +|+.+|.++ .++.+.+.+...+....+.++.+|+.+... ..+++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 46789999887765 23344445576 899999988 666655555554433467888888865320 12578
Q ss_pred eEEEEec
Q 016992 191 DIIISEW 197 (379)
Q Consensus 191 D~Iv~~~ 197 (379)
|++|.+.
T Consensus 87 d~lv~nA 93 (267)
T 3t4x_A 87 DILINNL 93 (267)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 9999864
No 467
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=79.32 E-value=6.4 Score=34.13 Aligned_cols=74 Identities=22% Similarity=0.235 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEA 81 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 35788999997655 23334444576 899999987 6666555555544 358889999876421 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 82 ~g~id~lv~nA 92 (247)
T 2jah_A 82 LGGLDILVNNA 92 (247)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999863
No 468
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=79.32 E-value=7.3 Score=34.73 Aligned_cols=70 Identities=19% Similarity=0.237 Sum_probs=41.2
Q ss_pred CCCCCEEEEEcCCCc--hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 120 LFKDKVVLDVGAGTG--ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G--~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
...++++|-+|+|.- ..+..+++.|+.+|+.++.+. ..+...+.+.. ..+..+ ...++.. ..+|+||+.
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~l~~--~~~DivIna 188 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEALEG--QSFDIVVNA 188 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGGGTT--CCCSEEEEC
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHHhcc--cCCCEEEEC
Confidence 357889999998721 223344456877999999887 44433332221 124443 2333321 578999975
Q ss_pred c
Q 016992 197 W 197 (379)
Q Consensus 197 ~ 197 (379)
.
T Consensus 189 T 189 (272)
T 3pwz_A 189 T 189 (272)
T ss_dssp S
T ss_pred C
Confidence 3
No 469
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.27 E-value=3.6 Score=36.52 Aligned_cols=74 Identities=20% Similarity=0.264 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.++ .++...+.+...+ .++.++.+|+.+... .
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~ 106 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGE 106 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999998765 23444455576 899999988 7766666666655 358889999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+++|++|.+.
T Consensus 107 ~g~iD~lvnnA 117 (276)
T 3r1i_A 107 LGGIDIAVCNA 117 (276)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 470
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=79.23 E-value=2.9 Score=36.68 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP--GQILTVQMDVRNTDDIQKMIEQIDEK 80 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST--TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35788999887665 23444455576 899999988 7776666554433 468999999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 81 ~g~id~lv~nA 91 (257)
T 3imf_A 81 FGRIDILINNA 91 (257)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 471
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=79.20 E-value=5.6 Score=35.11 Aligned_cols=74 Identities=23% Similarity=0.341 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH------------H-HHHHHHHHHHHcCCCCcEEEEEcceeecc
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS------------Q-MANMAKQIVEANGFSNVITVLKGKIEEIE 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s------------~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~ 184 (379)
..+++||-.|++.| .++..+++.|+ +|+++|.+ . .++...+.+...+ .++.++.+|+.+..
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRE 87 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHH
Confidence 46789999997765 23444555576 89999875 5 5555544455544 46899999987643
Q ss_pred C-----C-----CCceeEEEEec
Q 016992 185 L-----P-----VTKVDIIISEW 197 (379)
Q Consensus 185 ~-----~-----~~~~D~Iv~~~ 197 (379)
. . .+.+|++|.+.
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHHHcCCCCEEEECC
Confidence 1 0 14789999864
No 472
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=79.03 E-value=4 Score=36.42 Aligned_cols=71 Identities=20% Similarity=0.305 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC------CCCce
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL------PVTKV 190 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~ 190 (379)
..+++||-.|++.| .++..+++.|+ +|++++.+. ..+.+.+.+ ..++.++.+|+.+... ..+.+
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~i 87 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGA 87 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCC
Confidence 46789999997755 23334444576 899999987 655443322 3579999999876530 11478
Q ss_pred eEEEEec
Q 016992 191 DIIISEW 197 (379)
Q Consensus 191 D~Iv~~~ 197 (379)
|++|.+.
T Consensus 88 D~lv~nA 94 (291)
T 3rd5_A 88 DVLINNA 94 (291)
T ss_dssp EEEEECC
T ss_pred CEEEECC
Confidence 9999864
No 473
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=78.97 E-value=5.2 Score=31.80 Aligned_cols=90 Identities=13% Similarity=0.127 Sum_probs=51.8
Q ss_pred CCEEEEEcCCCchHHHHHHH----cCCCEEEEEecH-H-HHHHHHHHHHHcCCCCcEEEEEcceeecc----CCCCceeE
Q 016992 123 DKVVLDVGAGTGILSLFCAK----AGAAHVYAVECS-Q-MANMAKQIVEANGFSNVITVLKGKIEEIE----LPVTKVDI 192 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~----~g~~~v~~vD~s-~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~ 192 (379)
..+|+-+|+ |.++..+++ .|. .|+.+|.+ + .++...+... ..+.++.+|..+.. ..-..+|+
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRA 74 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCE
Confidence 346888876 555555444 454 89999986 4 4444433221 23788999876532 11357899
Q ss_pred EEEecCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 193 IISEWMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 193 Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
|++..- .......+....+.+.|...++
T Consensus 75 vi~~~~------~d~~n~~~~~~a~~~~~~~~ii 102 (153)
T 1id1_A 75 ILALSD------NDADNAFVVLSAKDMSSDVKTV 102 (153)
T ss_dssp EEECSS------CHHHHHHHHHHHHHHTSSSCEE
T ss_pred EEEecC------ChHHHHHHHHHHHHHCCCCEEE
Confidence 986421 1233344444556666666665
No 474
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=78.80 E-value=4.9 Score=36.75 Aligned_cols=86 Identities=14% Similarity=0.159 Sum_probs=45.9
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH---H-HHH-HHHHHHHHcCCCCcEEEEEcc-
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS---Q-MAN-MAKQIVEANGFSNVITVLKGK- 179 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s---~-~~~-~a~~~~~~~~~~~~i~~~~~d- 179 (379)
-|.+.+........+++||-+|+| | ..+..+++.|+++|+.++.+ . .++ .+++.....+. .+.++..+
T Consensus 140 Gf~~~L~~~~~~l~gk~~lVlGaG-G~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~--~~~~~~~~~ 216 (315)
T 3tnl_A 140 GYMRALKEAGHDIIGKKMTICGAG-GAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDC--KAQLFDIED 216 (315)
T ss_dssp HHHHHHHHTTCCCTTSEEEEECCS-HHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSC--EEEEEETTC
T ss_pred HHHHHHHHcCCCccCCEEEEECCC-hHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCC--ceEEeccch
Confidence 344455443334578999999987 3 23334455688899999987 5 333 33332222221 24443221
Q ss_pred eeeccCCCCceeEEEEec
Q 016992 180 IEEIELPVTKVDIIISEW 197 (379)
Q Consensus 180 ~~~~~~~~~~~D~Iv~~~ 197 (379)
..++......+|+||+..
T Consensus 217 ~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 217 HEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp HHHHHHHHHTCSEEEECS
T ss_pred HHHHHhhhcCCCEEEECc
Confidence 111110013689999753
No 475
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=78.78 E-value=5.7 Score=35.18 Aligned_cols=76 Identities=24% Similarity=0.195 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCC-CcEEEEEcceeeccC-----C----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFS-NVITVLKGKIEEIEL-----P---- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~-~~i~~~~~d~~~~~~-----~---- 186 (379)
..+++||-.|++.| .++..+++.|+ +|+.+|.++ .++.+.+.+...+.. .++.++.+|+.+... .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 46789999997765 23444455576 899999988 776666666554421 268999999876431 0
Q ss_pred -CCceeEEEEec
Q 016992 187 -VTKVDIIISEW 197 (379)
Q Consensus 187 -~~~~D~Iv~~~ 197 (379)
.+++|++|.+.
T Consensus 88 ~~g~id~lv~nA 99 (281)
T 3svt_A 88 WHGRLHGVVHCA 99 (281)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 14689999864
No 476
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=78.67 E-value=14 Score=32.20 Aligned_cols=73 Identities=16% Similarity=0.130 Sum_probs=45.0
Q ss_pred CCCCEEEEEcCCC-chHHHHHHH----cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc----------
Q 016992 121 FKDKVVLDVGAGT-GILSLFCAK----AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE---------- 184 (379)
Q Consensus 121 ~~~~~VLDlGcG~-G~~~~~la~----~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~---------- 184 (379)
..+++||-.|++. |.++..+++ .|+ +|+.++.++ ..+.+++.....+ .+.++.+|+.+..
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHH
Confidence 3578899999862 555555444 465 899998775 4344443333322 2367888887642
Q ss_pred CCCCceeEEEEec
Q 016992 185 LPVTKVDIIISEW 197 (379)
Q Consensus 185 ~~~~~~D~Iv~~~ 197 (379)
-..+.+|++|...
T Consensus 83 ~~~g~iD~lv~~A 95 (265)
T 1qsg_A 83 KVWPKFDGFVHSI 95 (265)
T ss_dssp TTCSSEEEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 1124789999864
No 477
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=78.63 E-value=1.4 Score=51.70 Aligned_cols=101 Identities=17% Similarity=0.158 Sum_probs=61.4
Q ss_pred hccCCCCCCEEEEEcC--CCchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceee-c-c-CCCC
Q 016992 116 QNKFLFKDKVVLDVGA--GTGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEE-I-E-LPVT 188 (379)
Q Consensus 116 ~~~~~~~~~~VLDlGc--G~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~-~-~-~~~~ 188 (379)
......+|.+||-.|+ |.|..++.+|+ .|+ +|++++.++ ..+.+++.+...|...-+.....++.+ + . ....
T Consensus 1661 ~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~ 1739 (2512)
T 2vz8_A 1661 VRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGK 1739 (2512)
T ss_dssp TTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSC
T ss_pred HHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCC
Confidence 3345789999999974 34777888888 576 899999888 777776543223332111111111111 1 1 1124
Q ss_pred ceeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 189 KVDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 189 ~~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
.+|+|+-. + + ...+....+.|+++|+++.
T Consensus 1740 GvDvVld~-----~---g--~~~l~~~l~~L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1740 GVDLVLNS-----L---A--EEKLQASVRCLAQHGRFLE 1768 (2512)
T ss_dssp CEEEEEEC-----C---C--HHHHHHHHTTEEEEEEEEE
T ss_pred CceEEEEC-----C---C--chHHHHHHHhcCCCcEEEE
Confidence 69999852 1 1 2346777799999999873
No 478
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=78.50 E-value=4.4 Score=36.14 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeec-cC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEI-EL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~---------- 185 (379)
..+++||-.|++.| .++..+++.|+ +|++++.+. ..+.+.+.+...+- .++.++.+|+.+. ..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~ 87 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKT 87 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHH
Confidence 35788999887765 23334444576 999999988 76666555554432 4699999998775 20
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..+.+|++|.+.
T Consensus 88 ~~g~iD~lv~nA 99 (311)
T 3o26_A 88 HFGKLDILVNNA 99 (311)
T ss_dssp HHSSCCEEEECC
T ss_pred hCCCCCEEEECC
Confidence 014789999864
No 479
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=78.50 E-value=4.4 Score=36.61 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=40.0
Q ss_pred CCCEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-------------------HHHHHHHHHHHcCCCCcEEEEEcce
Q 016992 122 KDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-------------------MANMAKQIVEANGFSNVITVLKGKI 180 (379)
Q Consensus 122 ~~~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-------------------~~~~a~~~~~~~~~~~~i~~~~~d~ 180 (379)
.+.+||-+|||. | ..+..+++.|.++++.+|.+. .++.|++++.+.+-.-+|+.+..++
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l 114 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNI 114 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCT
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccC
Confidence 567999999984 4 456677888999999999542 4555666666544323455555444
Q ss_pred e
Q 016992 181 E 181 (379)
Q Consensus 181 ~ 181 (379)
.
T Consensus 115 ~ 115 (292)
T 3h8v_A 115 T 115 (292)
T ss_dssp T
T ss_pred C
Confidence 3
No 480
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=78.40 E-value=3.5 Score=36.64 Aligned_cols=74 Identities=24% Similarity=0.333 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC---------CC
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------PV 187 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------~~ 187 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... ..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~ 107 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG--GTAQELAGDLSEAGAGTDLIERAEAI 107 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT--CCEEEEECCTTSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 46789999987765 23444455576 899999988 6666666665554 458999999876531 01
Q ss_pred CceeEEEEec
Q 016992 188 TKVDIIISEW 197 (379)
Q Consensus 188 ~~~D~Iv~~~ 197 (379)
+.+|++|.+.
T Consensus 108 g~iD~lvnnA 117 (275)
T 4imr_A 108 APVDILVINA 117 (275)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 4789999864
No 481
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=78.36 E-value=6.7 Score=34.38 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+.......++.++.+|+.+... .
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35789999997655 23334444576 899999987 666555545443112458889999876421 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 90 ~g~id~lv~nA 100 (267)
T 1iy8_A 90 FGRIDGFFNNA 100 (267)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14689999864
No 482
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=77.97 E-value=2 Score=39.24 Aligned_cols=46 Identities=17% Similarity=0.225 Sum_probs=30.1
Q ss_pred HHHHHHHhccCCCCCCEEEEEcCCCc--hHHHHHHHcCCCEEEEEecH
Q 016992 109 SYQNVIYQNKFLFKDKVVLDVGAGTG--ILSLFCAKAGAAHVYAVECS 154 (379)
Q Consensus 109 ~~~~~i~~~~~~~~~~~VLDlGcG~G--~~~~~la~~g~~~v~~vD~s 154 (379)
-|.+.+........+++||-+|+|.- ..+..+++.|+++|+.+..+
T Consensus 134 Gf~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 134 GHIRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp HHHHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 34455554333457889999998631 22334455688899999988
No 483
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=77.96 E-value=7.1 Score=34.04 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=49.1
Q ss_pred CCCCEEEEEcCCCchHHHH----HHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc-----CC----
Q 016992 121 FKDKVVLDVGAGTGILSLF----CAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE-----LP---- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~----la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~-----~~---- 186 (379)
..+++||-.|++.| ++.. +++.|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+.. +.
T Consensus 7 l~~k~vlVTGas~g-iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 7 LEGCTALVTGGSRG-IGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999987654 4444 444576 899999887 6665555555444 45888999987642 00
Q ss_pred -C-CceeEEEEec
Q 016992 187 -V-TKVDIIISEW 197 (379)
Q Consensus 187 -~-~~~D~Iv~~~ 197 (379)
. +.+|++|.+.
T Consensus 83 ~~~g~id~lv~~A 95 (260)
T 2ae2_A 83 HFHGKLNILVNNA 95 (260)
T ss_dssp HTTTCCCEEEECC
T ss_pred HcCCCCCEEEECC
Confidence 1 5789999864
No 484
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=77.85 E-value=5 Score=38.98 Aligned_cols=102 Identities=12% Similarity=0.120 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH---cCC---------CCcEEEEEcceeeccCC
Q 016992 122 KDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA---NGF---------SNVITVLKGKIEEIELP 186 (379)
Q Consensus 122 ~~~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~---~~~---------~~~i~~~~~d~~~~~~~ 186 (379)
...+|.-||+|. | .++..+++.|. +|+++|.++ .++..++.... .++ ..++.+. .|..+.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a--- 81 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAA--- 81 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHH---
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHH---
Confidence 346899999996 3 45566677776 899999998 77766542100 000 0123332 122111
Q ss_pred CCceeEEEEecCc----cccCChhhHHHHHHHHHhcccCCEEEEec
Q 016992 187 VTKVDIIISEWMG----YFLLFENMLNTVLYARDKWLVDDGIVLPD 228 (379)
Q Consensus 187 ~~~~D~Iv~~~~~----~~l~~~~~~~~~l~~~~~~LkpgG~lip~ 228 (379)
....|+|+..... ..-.....+..+++.+...|++|..++..
T Consensus 82 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~ 127 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDK 127 (478)
T ss_dssp HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 1357888864321 00111145677788888899998877643
No 485
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=77.82 E-value=7.1 Score=34.53 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCCchHHHH----HHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTGILSLF----CAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G~~~~~----la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..+++||-.|++.| ++.. +++.|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+...
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 35678999997654 4444 444576 899999988 6665555555544 358889999876420
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..+.+|++|...
T Consensus 96 ~~g~iD~lv~~A 107 (277)
T 2rhc_B 96 RYGPVDVLVNNA 107 (277)
T ss_dssp HTCSCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 024689999864
No 486
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=77.75 E-value=3.8 Score=36.52 Aligned_cols=75 Identities=13% Similarity=0.216 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+- ..+.++.+|+.+... .
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 108 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVCDVGDPDQVAALFAAVRAE 108 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHS-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999887765 23334445576 899999988 66665555544332 336889999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+++|++|.+.
T Consensus 109 ~g~iD~lvnnA 119 (281)
T 4dry_A 109 FARLDLLVNNA 119 (281)
T ss_dssp HSCCSEEEECC
T ss_pred cCCCCEEEECC
Confidence 14789999864
No 487
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=77.66 E-value=7.3 Score=34.30 Aligned_cols=74 Identities=18% Similarity=0.183 Sum_probs=49.6
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC-----C-----
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL-----P----- 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~-----~----- 186 (379)
..+++||-.|++.| .++..+++.|+ +|++++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 95 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV 95 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHH
Confidence 45789999997654 23334444576 899999988 6666555555544 358889999876420 0
Q ss_pred C-CceeEEEEec
Q 016992 187 V-TKVDIIISEW 197 (379)
Q Consensus 187 ~-~~~D~Iv~~~ 197 (379)
. +.+|++|.+.
T Consensus 96 ~~g~id~lv~nA 107 (273)
T 1ae1_A 96 FDGKLNILVNNA 107 (273)
T ss_dssp TTSCCCEEEECC
T ss_pred cCCCCcEEEECC
Confidence 1 6789999864
No 488
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=77.53 E-value=6.1 Score=35.06 Aligned_cols=74 Identities=20% Similarity=0.319 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecH----------------H-HHHHHHHHHHHcCCCCcEEEEEcce
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECS----------------Q-MANMAKQIVEANGFSNVITVLKGKI 180 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s----------------~-~~~~a~~~~~~~~~~~~i~~~~~d~ 180 (379)
..++++|-.|++.| .++..+++.|+ +|+++|.+ . .++...+.+...+ .++.++.+|+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 85 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN--RRIVTAEVDV 85 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT--CCEEEEECCT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC--CceEEEEcCC
Confidence 46889999998876 33444555676 89999876 4 4444444444433 4689999998
Q ss_pred eeccC----------CCCceeEEEEec
Q 016992 181 EEIEL----------PVTKVDIIISEW 197 (379)
Q Consensus 181 ~~~~~----------~~~~~D~Iv~~~ 197 (379)
.+... ..+.+|++|.+.
T Consensus 86 ~~~~~v~~~~~~~~~~~g~id~lv~nA 112 (286)
T 3uve_A 86 RDYDALKAAVDSGVEQLGRLDIIVANA 112 (286)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECC
Confidence 76431 014789999864
No 489
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=77.53 E-value=6.1 Score=34.94 Aligned_cols=75 Identities=17% Similarity=0.252 Sum_probs=50.6
Q ss_pred CCCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEec-------------HH-HHHHHHHHHHHcCCCCcEEEEEcceee
Q 016992 120 LFKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVEC-------------SQ-MANMAKQIVEANGFSNVITVLKGKIEE 182 (379)
Q Consensus 120 ~~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~-------------s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~ 182 (379)
...+++||-.|++.| .++..+++.|+ +|+++|. +. .++.+.+.+...+ .++.++.+|+.+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~ 88 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRD 88 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCC
Confidence 357889999998776 23444555676 8999987 55 5655555555544 458899999876
Q ss_pred ccC----------CCCceeEEEEec
Q 016992 183 IEL----------PVTKVDIIISEW 197 (379)
Q Consensus 183 ~~~----------~~~~~D~Iv~~~ 197 (379)
... ..+++|++|.+.
T Consensus 89 ~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 89 DAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECC
Confidence 430 014789999864
No 490
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=77.40 E-value=7 Score=36.25 Aligned_cols=74 Identities=19% Similarity=0.304 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecH-------------------H-HHHHHHHHHHHcCCCCcEEEEEcc
Q 016992 122 KDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECS-------------------Q-MANMAKQIVEANGFSNVITVLKGK 179 (379)
Q Consensus 122 ~~~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s-------------------~-~~~~a~~~~~~~~~~~~i~~~~~d 179 (379)
.+.+||-+|||. | ..+..+++.|.++++.+|.+ . .++.+++.+....-.-+|+.+..+
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 196 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALN 196 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeecc
Confidence 356999999974 3 44556677799999999864 2 455666666654332346666655
Q ss_pred eeecc-CC-CCceeEEEE
Q 016992 180 IEEIE-LP-VTKVDIIIS 195 (379)
Q Consensus 180 ~~~~~-~~-~~~~D~Iv~ 195 (379)
+.... +. -..+|+|+.
T Consensus 197 i~~~~~~~~~~~~DlVvd 214 (353)
T 3h5n_A 197 INDYTDLHKVPEADIWVV 214 (353)
T ss_dssp CCSGGGGGGSCCCSEEEE
T ss_pred cCchhhhhHhccCCEEEE
Confidence 43321 10 357999985
No 491
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=77.37 E-value=6.8 Score=35.34 Aligned_cols=96 Identities=18% Similarity=0.217 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecC
Q 016992 122 KDKVVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWM 198 (379)
Q Consensus 122 ~~~~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~ 198 (379)
..++|--||+|+ | .++..++ .|. .|+++|.++ .++.+.+.+...-+ .++++. .|..+ -...|+||...+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~-~~i~~~-~~~~~----~~~aDlVieavp 82 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELL-SKIEFT-TTLEK----VKDCDIVMEAVF 82 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGG-GGEEEE-SSCTT----GGGCSEEEECCC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHh-CCeEEe-CCHHH----HcCCCEEEEcCc
Confidence 457899999996 3 5677777 776 999999999 88877665211000 135533 23332 256899996432
Q ss_pred ccccCChhhHHHHHHHHHhcccCCEEEEecCCc
Q 016992 199 GYFLLFENMLNTVLYARDKWLVDDGIVLPDKAS 231 (379)
Q Consensus 199 ~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~ 231 (379)
........++..+... ||.++.-++.+
T Consensus 83 ----e~~~vk~~l~~~l~~~--~~~IlasntSt 109 (293)
T 1zej_A 83 ----EDLNTKVEVLREVERL--TNAPLCSNTSV 109 (293)
T ss_dssp ----SCHHHHHHHHHHHHTT--CCSCEEECCSS
T ss_pred ----CCHHHHHHHHHHHhcC--CCCEEEEECCC
Confidence 2223345566666555 77666544333
No 492
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=77.30 E-value=7.9 Score=36.95 Aligned_cols=55 Identities=25% Similarity=0.353 Sum_probs=39.3
Q ss_pred CCEEEEEcCCCchHHHHHHHc----C--CCEEEEEecHH-HHHHHHHHHHHc--CCCCcEEEEE
Q 016992 123 DKVVLDVGAGTGILSLFCAKA----G--AAHVYAVECSQ-MANMAKQIVEAN--GFSNVITVLK 177 (379)
Q Consensus 123 ~~~VLDlGcG~G~~~~~la~~----g--~~~v~~vD~s~-~~~~a~~~~~~~--~~~~~i~~~~ 177 (379)
...|+|+|+|+|.++..+.+. + ..+++.||+|+ +.+.-++.+... .+..+|.+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~ 201 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD 201 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc
Confidence 469999999999988777652 2 24899999999 777767766542 1224577753
No 493
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=77.04 E-value=5.8 Score=34.87 Aligned_cols=74 Identities=18% Similarity=0.207 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHH-cCCCCcEEEEEcceeeccC----------
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEA-NGFSNVITVLKGKIEEIEL---------- 185 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~-~~~~~~i~~~~~d~~~~~~---------- 185 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.+. .++.+.+.+.. .+ .++.++.+|+.+...
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 94 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFG--TDVHTVAIDLAEPDAPAELARRAAE 94 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHC--CCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999888765 23444455576 899999988 66665555544 33 458999999877531
Q ss_pred CCCceeEEEEec
Q 016992 186 PVTKVDIIISEW 197 (379)
Q Consensus 186 ~~~~~D~Iv~~~ 197 (379)
..+.+|++|.+.
T Consensus 95 ~~g~id~lv~nA 106 (266)
T 4egf_A 95 AFGGLDVLVNNA 106 (266)
T ss_dssp HHTSCSEEEEEC
T ss_pred HcCCCCEEEECC
Confidence 014789999864
No 494
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=77.04 E-value=5.2 Score=35.07 Aligned_cols=75 Identities=15% Similarity=0.201 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..+++||-.|++.| .++..+++.|+ +|+.++.+. .++.+.+.+...+- .++.++.+|+.+... .
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGS-GKVIGVQTDVSDRAQCDALAGRAVEE 85 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSS-SCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999887665 23344445576 999999988 77766666655442 368999999876431 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 86 ~g~id~lvnnA 96 (262)
T 3pk0_A 86 FGGIDVVCANA 96 (262)
T ss_dssp HSCCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 14789999864
No 495
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=77.03 E-value=2.6 Score=38.85 Aligned_cols=89 Identities=17% Similarity=0.098 Sum_probs=50.8
Q ss_pred CCC-CEEEEE-cCC-CchHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeecc------CCCCc
Q 016992 121 FKD-KVVLDV-GAG-TGILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIE------LPVTK 189 (379)
Q Consensus 121 ~~~-~~VLDl-GcG-~G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~ 189 (379)
.++ .+||-. |+| .|..+..+++ .|+ +|++++.++ .++.+++ .|.. .++..+-.++. .....
T Consensus 162 ~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~~~~g 233 (349)
T 3pi7_A 162 QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKD----IGAA---HVLNEKAPDFEATLREVMKAEQ 233 (349)
T ss_dssp HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHH----HTCS---EEEETTSTTHHHHHHHHHHHHC
T ss_pred hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCCC---EEEECCcHHHHHHHHHHhcCCC
Confidence 445 566654 333 2555566666 577 999999988 8887764 3432 22222111110 00136
Q ss_pred eeEEEEecCccccCChhhHHHHHHHHHhcccCCEEEEe
Q 016992 190 VDIIISEWMGYFLLFENMLNTVLYARDKWLVDDGIVLP 227 (379)
Q Consensus 190 ~D~Iv~~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 227 (379)
+|+|+-. .+ . ..+....+.|+++|.++.
T Consensus 234 ~D~vid~-~g-------~--~~~~~~~~~l~~~G~iv~ 261 (349)
T 3pi7_A 234 PRIFLDA-VT-------G--PLASAIFNAMPKRARWII 261 (349)
T ss_dssp CCEEEES-SC-------H--HHHHHHHHHSCTTCEEEE
T ss_pred CcEEEEC-CC-------C--hhHHHHHhhhcCCCEEEE
Confidence 9999853 21 1 123556688999999884
No 496
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=77.01 E-value=4.4 Score=38.72 Aligned_cols=85 Identities=31% Similarity=0.382 Sum_probs=49.3
Q ss_pred CCCCCEEEEEcCCC-chHHHHHHH-cCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEe
Q 016992 120 LFKDKVVLDVGAGT-GILSLFCAK-AGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISE 196 (379)
Q Consensus 120 ~~~~~~VLDlGcG~-G~~~~~la~-~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~ 196 (379)
...|++|+-+|+|. |......++ .|+ +|+++|.++ ....|. ..|+ ++ .++.++ + ...|+|+.-
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~----~~G~----~v--~~Leea-l--~~ADIVi~a 282 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQAC----MDGF----RL--VKLNEV-I--RQVDIVITC 282 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTC----EE--CCHHHH-T--TTCSEEEEC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHH----HcCC----Ee--ccHHHH-H--hcCCEEEEC
Confidence 45899999999986 433333344 576 899999988 544332 2232 22 233333 1 467999862
Q ss_pred cCccccCChhhHHHHHHHHHhcccCCEEEE
Q 016992 197 WMGYFLLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 197 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.+ -. .. +-.+....+|+|++++
T Consensus 283 -tg--t~--~l---I~~e~l~~MK~gailI 304 (435)
T 3gvp_A 283 -TG--NK--NV---VTREHLDRMKNSCIVC 304 (435)
T ss_dssp -SS--CS--CS---BCHHHHHHSCTTEEEE
T ss_pred -CC--Cc--cc---CCHHHHHhcCCCcEEE
Confidence 11 11 11 1113346789999887
No 497
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=76.93 E-value=7.8 Score=34.17 Aligned_cols=74 Identities=23% Similarity=0.315 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEec-------------HH-HHHHHHHHHHHcCCCCcEEEEEcceeec
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVEC-------------SQ-MANMAKQIVEANGFSNVITVLKGKIEEI 183 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~-------------s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~ 183 (379)
..++++|-.|++.| .++..+++.|+ +|+.+|. +. .++...+.+...+ .++.++.+|+.+.
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDF 85 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCH
Confidence 46789999998776 23444555676 8999987 45 5555555555544 4588999998764
Q ss_pred cC-----C-----CCceeEEEEec
Q 016992 184 EL-----P-----VTKVDIIISEW 197 (379)
Q Consensus 184 ~~-----~-----~~~~D~Iv~~~ 197 (379)
.. . .+++|++|.+.
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECC
Confidence 31 0 14689999864
No 498
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=76.88 E-value=6.7 Score=34.28 Aligned_cols=74 Identities=22% Similarity=0.276 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..++++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRD 81 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35789999998765 23334444576 899999987 6665555554433 458889999876420 0
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+.+|++|.+.
T Consensus 82 ~g~id~lv~nA 92 (262)
T 1zem_A 82 FGKIDFLFNNA 92 (262)
T ss_dssp HSCCCEEEECC
T ss_pred hCCCCEEEECC
Confidence 14689999864
No 499
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=76.76 E-value=9 Score=33.76 Aligned_cols=84 Identities=18% Similarity=0.087 Sum_probs=52.1
Q ss_pred EEEEEcCCC-c-hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccCCCCceeEEEEecCccc
Q 016992 125 VVLDVGAGT-G-ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIELPVTKVDIIISEWMGYF 201 (379)
Q Consensus 125 ~VLDlGcG~-G-~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Iv~~~~~~~ 201 (379)
+|.-||||. | .++..+++.|. +|+++|.++ .++.+. ..|... . ...+..+. ...|+|+.....
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~----~~g~~~--~-~~~~~~~~----~~~D~vi~av~~-- 67 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAV----ERQLVD--E-AGQDLSLL----QTAKIIFLCTPI-- 67 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH----HTTSCS--E-EESCGGGG----TTCSEEEECSCH--
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH----hCCCCc--c-ccCCHHHh----CCCCEEEEECCH--
Confidence 577889875 2 33444555665 899999988 666543 334422 1 12333333 458999864321
Q ss_pred cCChhhHHHHHHHHHhcccCCEEEE
Q 016992 202 LLFENMLNTVLYARDKWLVDDGIVL 226 (379)
Q Consensus 202 l~~~~~~~~~l~~~~~~LkpgG~li 226 (379)
.....++..+...++++..++
T Consensus 68 ----~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 68 ----QLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ----HHHHHHHHHHGGGSCTTCEEE
T ss_pred ----HHHHHHHHHHHhhCCCCCEEE
Confidence 345677788888888887665
No 500
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=76.73 E-value=3.4 Score=36.58 Aligned_cols=74 Identities=16% Similarity=0.138 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCCCc---hHHHHHHHcCCCEEEEEecHH-HHHHHHHHHHHcCCCCcEEEEEcceeeccC----------C
Q 016992 121 FKDKVVLDVGAGTG---ILSLFCAKAGAAHVYAVECSQ-MANMAKQIVEANGFSNVITVLKGKIEEIEL----------P 186 (379)
Q Consensus 121 ~~~~~VLDlGcG~G---~~~~~la~~g~~~v~~vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~----------~ 186 (379)
..|+++|-.|++.| .++..+++.|+ +|+.++.++ .++.+.+.+...+ .++.++.+|+.+... .
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQ 100 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46789999987665 23444455576 899999988 7776666666655 458899999876431 1
Q ss_pred CCceeEEEEec
Q 016992 187 VTKVDIIISEW 197 (379)
Q Consensus 187 ~~~~D~Iv~~~ 197 (379)
.+++|++|.+.
T Consensus 101 ~g~iD~lv~nA 111 (271)
T 4ibo_A 101 GIDVDILVNNA 111 (271)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCCEEEECC
Confidence 24789999864
Done!