Query 016998
Match_columns 379
No_of_seqs 344 out of 2872
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 07:16:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016998.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016998hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 4.9E-65 1.7E-69 502.4 28.5 308 63-374 5-326 (341)
2 3hl4_A Choline-phosphate cytid 100.0 8.9E-31 3.1E-35 244.7 16.7 141 60-204 71-213 (236)
3 3elb_A Ethanolamine-phosphate 99.9 2.6E-26 9E-31 226.3 15.2 146 54-203 187-337 (341)
4 3hl4_A Choline-phosphate cytid 99.9 3.7E-25 1.3E-29 206.7 8.8 122 251-374 71-201 (236)
5 2b7l_A Glycerol-3-phosphate cy 99.9 8E-24 2.7E-28 180.9 11.1 129 65-203 1-129 (132)
6 1coz_A Protein (glycerol-3-pho 99.9 1.3E-23 4.5E-28 178.7 10.9 127 65-201 1-127 (129)
7 3glv_A Lipopolysaccharide core 99.9 7.4E-23 2.5E-27 178.1 11.3 133 65-204 2-139 (143)
8 3op1_A Macrolide-efflux protei 99.9 2.1E-21 7.3E-26 188.8 12.7 135 66-203 21-177 (308)
9 1mrz_A Riboflavin kinase/FMN a 99.8 3E-20 1E-24 179.8 12.2 130 68-203 2-147 (293)
10 2x0k_A Riboflavin biosynthesis 99.8 9.1E-20 3.1E-24 179.7 10.5 136 66-203 16-174 (338)
11 3nv7_A Phosphopantetheine aden 99.8 5.3E-20 1.8E-24 162.9 4.9 108 257-371 3-122 (157)
12 1coz_A Protein (glycerol-3-pho 99.8 2.6E-18 9E-23 145.9 10.7 113 257-371 2-115 (129)
13 3k9w_A Phosphopantetheine aden 99.7 1.7E-18 5.7E-23 157.5 8.8 136 58-203 15-159 (187)
14 2b7l_A Glycerol-3-phosphate cy 99.7 5.6E-18 1.9E-22 144.5 11.2 113 257-371 2-115 (132)
15 4f3r_A Phosphopantetheine aden 99.7 2.2E-18 7.5E-23 153.3 7.2 109 256-371 5-124 (162)
16 1qjc_A Phosphopantetheine aden 99.7 1.5E-17 5.1E-22 145.5 9.5 128 66-203 2-138 (158)
17 2qtr_A Nicotinate (nicotinamid 99.7 5.5E-18 1.9E-22 152.7 5.6 133 66-203 3-166 (189)
18 1o6b_A Phosphopantetheine aden 99.7 3E-17 1E-21 145.7 10.2 129 66-203 3-139 (169)
19 3nbk_A Phosphopantetheine aden 99.7 1.7E-17 5.8E-22 149.4 8.4 109 254-370 19-139 (177)
20 1kam_A Deamido-NAD(+), nicotin 99.7 1.9E-16 6.4E-21 143.8 15.3 133 66-203 8-171 (194)
21 3glv_A Lipopolysaccharide core 99.7 5.7E-17 1.9E-21 140.8 10.4 95 256-353 2-96 (143)
22 3k9w_A Phosphopantetheine aden 99.7 3.5E-17 1.2E-21 148.7 8.2 109 256-371 22-142 (187)
23 3nv7_A Phosphopantetheine aden 99.7 7E-18 2.4E-22 149.3 3.2 126 65-203 2-139 (157)
24 4f3r_A Phosphopantetheine aden 99.7 2.7E-17 9.2E-22 146.2 7.0 130 65-203 5-141 (162)
25 1od6_A PPAT, phosphopantethein 99.6 8.8E-16 3E-20 134.6 12.1 122 68-203 3-139 (160)
26 3nd5_A Phosphopantetheine aden 99.6 2E-16 6.7E-21 141.9 7.0 108 256-370 2-122 (171)
27 3f3m_A Phosphopantetheine aden 99.6 8.3E-16 2.8E-20 137.4 9.2 130 65-203 3-140 (168)
28 1k4m_A NAMN adenylyltransferas 99.6 7.4E-16 2.5E-20 141.9 8.8 92 68-163 6-110 (213)
29 3f3m_A Phosphopantetheine aden 99.6 1.5E-15 5E-20 135.8 8.7 108 256-370 3-122 (168)
30 3nbk_A Phosphopantetheine aden 99.6 3.3E-15 1.1E-19 134.5 10.2 133 61-203 17-157 (177)
31 3nd5_A Phosphopantetheine aden 99.6 1.4E-15 4.8E-20 136.3 6.9 124 65-203 2-140 (171)
32 1yum_A 'probable nicotinate-nu 99.5 2E-14 6.8E-19 135.4 10.2 94 65-162 23-129 (242)
33 1vlh_A Phosphopantetheine aden 99.5 1.7E-14 5.8E-19 129.1 8.8 124 66-203 13-149 (173)
34 2h29_A Probable nicotinate-nuc 99.5 2.7E-14 9.2E-19 129.0 9.9 134 66-203 3-166 (189)
35 1vlh_A Phosphopantetheine aden 99.5 2.5E-14 8.6E-19 128.0 9.2 108 256-370 12-131 (173)
36 2qjo_A Bifunctional NMN adenyl 99.5 1.7E-13 5.8E-18 133.0 10.7 131 64-203 6-151 (341)
37 3h05_A Uncharacterized protein 99.4 1.3E-13 4.3E-18 124.1 8.3 133 66-203 3-149 (177)
38 1ej2_A Nicotinamide mononucleo 99.4 6E-13 2.1E-17 119.5 11.7 126 66-203 4-142 (181)
39 1qjc_A Phosphopantetheine aden 99.4 8E-13 2.7E-17 115.3 10.8 92 256-354 1-93 (158)
40 3gmi_A UPF0348 protein MJ0951; 99.4 2.1E-12 7.2E-17 127.8 13.5 92 64-161 51-151 (357)
41 3do8_A Phosphopantetheine aden 99.4 1.2E-13 4.2E-18 120.8 3.0 124 67-202 2-142 (148)
42 1o6b_A Phosphopantetheine aden 99.3 4.6E-12 1.6E-16 112.1 10.2 107 256-369 2-120 (169)
43 1f9a_A Hypothetical protein MJ 99.3 1.7E-11 5.7E-16 108.7 13.2 125 67-203 2-136 (168)
44 1kqn_A Nmnat, nicotinamide mon 99.3 7.5E-12 2.6E-16 120.2 9.9 86 65-152 8-106 (279)
45 1od6_A PPAT, phosphopantethein 99.3 1.4E-11 4.8E-16 107.7 10.2 89 259-352 3-92 (160)
46 2ejc_A Pantoate--beta-alanine 99.3 2.7E-13 9.4E-18 130.0 -1.0 114 67-181 23-162 (280)
47 1nup_A FKSG76; NAD biosynthesi 99.2 1.9E-11 6.7E-16 115.4 9.6 88 65-152 6-104 (252)
48 1yum_A 'probable nicotinate-nu 99.2 9.4E-11 3.2E-15 110.2 10.9 111 255-370 22-155 (242)
49 1kam_A Deamido-NAD(+), nicotin 99.2 5.3E-11 1.8E-15 107.7 8.5 96 256-355 7-117 (194)
50 2qtr_A Nicotinate (nicotinamid 99.1 4.4E-11 1.5E-15 107.3 5.7 92 256-351 2-108 (189)
51 3do8_A Phosphopantetheine aden 99.1 9.8E-11 3.4E-15 102.3 6.5 106 258-370 2-123 (148)
52 1k4m_A NAMN adenylyltransferas 99.1 8.4E-11 2.9E-15 108.0 6.3 90 257-351 3-109 (213)
53 1lw7_A Transcriptional regulat 99.1 1.1E-09 3.8E-14 107.9 14.2 129 65-200 2-154 (365)
54 1lw7_A Transcriptional regulat 99.0 1.4E-10 4.8E-15 114.4 4.4 110 256-369 2-138 (365)
55 2qjt_B Nicotinamide-nucleotide 99.0 2E-09 6.8E-14 104.9 12.2 130 65-202 7-152 (352)
56 1v8f_A Pantoate-beta-alanine l 98.9 6.7E-11 2.3E-15 113.1 -2.1 128 65-197 19-186 (276)
57 1mrz_A Riboflavin kinase/FMN a 98.9 2.7E-09 9.3E-14 103.1 8.5 109 259-370 2-128 (293)
58 2h29_A Probable nicotinate-nuc 98.8 3.8E-09 1.3E-13 95.1 6.6 92 257-352 3-109 (189)
59 3ag6_A Pantothenate synthetase 98.8 4.5E-10 1.5E-14 107.7 -0.8 109 68-181 28-163 (283)
60 2x0k_A Riboflavin biosynthesis 98.7 2.8E-08 9.5E-13 97.8 9.6 113 256-371 15-156 (338)
61 2qjt_B Nicotinamide-nucleotide 98.6 3.6E-08 1.2E-12 96.0 6.2 60 256-319 7-66 (352)
62 2qjo_A Bifunctional NMN adenyl 98.6 7.1E-08 2.4E-12 93.3 7.9 109 256-368 7-134 (341)
63 1f9a_A Hypothetical protein MJ 98.6 8.8E-08 3E-12 84.6 7.8 109 258-370 2-119 (168)
64 3cov_A Pantothenate synthetase 98.6 5.8E-09 2E-13 100.7 -0.1 112 67-181 34-174 (301)
65 3op1_A Macrolide-efflux protei 98.6 6.3E-08 2.2E-12 94.0 7.0 97 256-353 20-133 (308)
66 1ej2_A Nicotinamide mononucleo 98.5 1.2E-07 4E-12 84.8 6.8 109 257-369 4-124 (181)
67 2ejc_A Pantoate--beta-alanine 98.5 1.6E-07 5.6E-12 89.9 7.8 71 255-328 21-93 (280)
68 3h05_A Uncharacterized protein 98.5 1.2E-07 4E-12 85.1 5.2 108 256-370 2-134 (177)
69 1kqn_A Nmnat, nicotinamide mon 98.3 5.5E-07 1.9E-11 86.2 6.7 84 255-341 7-102 (279)
70 1nup_A FKSG76; NAD biosynthesi 98.3 1.2E-06 4.1E-11 82.5 7.2 84 256-341 6-100 (252)
71 1v47_A ATP sulfurylase; produc 98.2 6.8E-06 2.3E-10 81.1 12.4 133 66-203 156-329 (349)
72 1jhd_A Sulfate adenylyltransfe 98.2 1.1E-05 3.8E-10 80.8 13.5 132 67-203 194-371 (396)
73 3gmi_A UPF0348 protein MJ0951; 98.2 6.5E-06 2.2E-10 81.4 11.1 114 255-375 51-181 (357)
74 3uk2_A Pantothenate synthetase 97.6 0.0001 3.4E-09 70.4 7.2 67 67-134 23-92 (283)
75 3inn_A Pantothenate synthetase 96.9 0.0021 7.1E-08 62.1 8.1 65 66-134 44-113 (314)
76 1v8f_A Pantoate-beta-alanine l 96.8 0.0039 1.3E-07 59.4 8.9 67 258-328 21-88 (276)
77 3q12_A Pantoate--beta-alanine 96.1 0.0046 1.6E-07 59.1 5.0 65 66-134 26-95 (287)
78 3ag6_A Pantothenate synthetase 96.0 0.023 7.8E-07 54.3 9.3 69 256-328 23-94 (283)
79 3q12_A Pantoate--beta-alanine 95.7 0.012 4.1E-07 56.2 5.6 37 255-294 24-62 (287)
80 3cov_A Pantothenate synthetase 95.2 0.045 1.5E-06 52.7 7.9 65 263-328 39-105 (301)
81 3mxt_A Pantothenate synthetase 94.7 0.057 1.9E-06 51.5 7.1 61 69-134 31-94 (285)
82 1r6x_A ATP:sulfate adenylyltra 94.3 0.56 1.9E-05 46.7 13.5 93 67-164 189-292 (395)
83 3inn_A Pantothenate synthetase 94.2 0.15 5E-06 49.2 8.7 68 255-327 42-113 (314)
84 1g8f_A Sulfate adenylyltransfe 94.1 0.76 2.6E-05 47.2 14.4 93 67-164 190-293 (511)
85 3n8h_A Pantothenate synthetase 94.0 0.086 2.9E-06 49.6 6.5 67 67-134 25-94 (264)
86 1v47_A ATP sulfurylase; produc 94.0 0.32 1.1E-05 47.6 11.0 88 259-353 158-260 (349)
87 1jhd_A Sulfate adenylyltransfe 94.0 0.27 9.2E-06 49.0 10.5 89 258-353 194-299 (396)
88 2gks_A Bifunctional SAT/APS ki 93.0 0.4 1.4E-05 49.6 10.1 92 67-163 165-268 (546)
89 3n8h_A Pantothenate synthetase 92.1 0.1 3.5E-06 49.1 3.9 38 255-293 23-60 (264)
90 3mxt_A Pantothenate synthetase 92.0 0.28 9.6E-06 46.7 6.8 66 255-327 24-94 (285)
91 3uk2_A Pantothenate synthetase 90.9 0.47 1.6E-05 45.1 7.1 71 255-327 21-92 (283)
92 1m8p_A Sulfate adenylyltransfe 90.3 0.89 3E-05 47.3 9.4 92 67-163 192-294 (573)
93 3cr8_A Sulfate adenylyltranfer 87.2 4.3 0.00015 41.9 11.9 93 67-164 165-268 (552)
94 1x6v_B Bifunctional 3'-phospho 68.3 19 0.00064 37.8 9.5 94 66-164 413-525 (630)
95 1m8p_A Sulfate adenylyltransfe 48.5 30 0.001 35.7 6.9 86 259-351 193-293 (573)
96 1r6x_A ATP:sulfate adenylyltra 35.6 3.2E+02 0.011 26.8 11.6 87 259-352 190-291 (395)
97 2gks_A Bifunctional SAT/APS ki 34.4 50 0.0017 33.7 5.9 86 259-351 166-267 (546)
98 1g8f_A Sulfate adenylyltransfe 26.4 1E+02 0.0036 31.2 6.6 87 259-352 191-292 (511)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-65 Score=502.35 Aligned_cols=308 Identities=43% Similarity=0.764 Sum_probs=261.1
Q ss_pred CCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccEEEeCCCccccH
Q 016998 63 KKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITE 142 (379)
Q Consensus 63 ~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~t~ 142 (379)
++|++|++.||||++|.||+++|++|+++||+|+||+++|+.+...|++|+++.+||++++++|+|||+|++..|+....
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~~~~ 84 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMGDYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYVTTL 84 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSSCCH
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhCCcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCCCHH
Confidence 56889999999999999999999999999999999999999876677789999999999999999999999877776677
Q ss_pred HHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCCeEEEeccCCCCCHHHHHHHHHhccccccccccccC--CCCCC
Q 016998 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNN--ASLPR 220 (379)
Q Consensus 143 efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~~~VSST~Ir~rI~~~~~~~~~~~~~~~--~~~~~ 220 (379)
+|++ ++++|++|+|+||++|.++.+.|+.+++.|+++.++|++++|||+|++||+.++++++....... .+...
T Consensus 85 efi~----~~~~d~vV~G~D~~~g~~~~~~~~~~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~~~ 160 (341)
T 3elb_A 85 ETLD----KYNCDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYAD 160 (341)
T ss_dssp HHHH----HTTCSEEEECSCCCBCTTSCBTTHHHHHTTCEEECCCCTTCCHHHHHHHHHC--------------------
T ss_pred HHHH----HhCCCEEEECCCCCCCCCCcchHHHHHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHHHH
Confidence 8875 68999999999999999999999999999999999999999999999999999998875332211 11123
Q ss_pred Cchhh--hccccccccccccccceeeccccCCCCCCCCeEEEEcCccccCChHHHHHHHHHHhcCC--EEEEEEecCcch
Q 016998 221 DPLRA--IQSKDAHLSQFLPTSRRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGD--FLLVGIYTDQIV 296 (379)
Q Consensus 221 ~~~~~--~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd--~liVgv~~D~~v 296 (379)
.|+.. ..++++.+++|++++++|.||++|+.|.+++++||++|+|||||.||+++|++|+++|| +|||||++|+++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v 240 (341)
T 3elb_A 161 SFGKCPGGRNPWTGVSQFLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEV 240 (341)
T ss_dssp -----------CCCCCCCCCCHHHHHHHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHH
T ss_pred hhccCccccCCCcceecccCCcceeeeeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhh
Confidence 34322 34567788999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred hccCCCCCCCCCHHHHHHHHHHccCcCceEeCCCCCchHHHHHHcCCcEEEEcCCCCCCCC--------CCCCceEEEEe
Q 016998 297 SEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTP--------LTVSLQFLYLP 368 (379)
Q Consensus 297 ~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~~~~~~~~~~i~~~~~d~vv~G~d~~~~~~--------l~~~~evv~lp 368 (379)
++.||+++|+||++||++++++|+|||+|++++|++++.+++++++||++|||+|+..+.. ...+.++..+|
T Consensus 241 ~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~v~~~~~l~~~~~~~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~ 320 (341)
T 3elb_A 241 NHYKGKNYPIMNLHERTLSVLACRYVSEVVIGAPYAVTAELLSHFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGIFRQID 320 (341)
T ss_dssp HHHHCTTCCSSCHHHHHHHHHTBTTCCEEEEEECSSCCHHHHHHTTCSEEEECSSCCCCCTTSCCTTHHHHHHTCEEECC
T ss_pred HhhcCCCCCCCCHHHHHHHHHHcCCCCCEEECCCCcchHHHHHhcCCcEEEECCCCccccCCccchHHHHHhCCEEEEcC
Confidence 9999987899999999999999999999999999999999999999999999998776421 22367899999
Q ss_pred eeccee
Q 016998 369 LINYCI 374 (379)
Q Consensus 369 ~~~~~~ 374 (379)
+..++|
T Consensus 321 ~~~~~S 326 (341)
T 3elb_A 321 SGSNLT 326 (341)
T ss_dssp CSCCCC
T ss_pred CCCCCC
Confidence 887765
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.97 E-value=8.9e-31 Score=244.69 Aligned_cols=141 Identities=43% Similarity=0.683 Sum_probs=130.8
Q ss_pred cCCCCCeEEEEecccCcCCHHHHHHHHHHHHc--CCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccEEEeCCC
Q 016998 60 CGKKKRVRVYMDGCFDLMHYGHANALRQAKAL--GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAP 137 (379)
Q Consensus 60 ~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~--~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~Vv~~~p 137 (379)
....++++||+.|+||++|.||+++|++|+++ +|+|+|||++|+.+..+|++|+++.+||++++++|+|||+|+++.|
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~p 150 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAP 150 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSCC
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECCc
Confidence 34467899999999999999999999999999 4899999999998877788899999999999999999999999999
Q ss_pred ccccHHHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCCeEEEeccCCCCCHHHHHHHHHhcc
Q 016998 138 YAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSSM 204 (379)
Q Consensus 138 ~~~t~efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~~~VSST~Ir~rI~~~~ 204 (379)
|.++.+|++ ++++|+||+|+|+.++.++.+.|+.+++.|+++.++|++++|||+|++||+...
T Consensus 151 ~~l~~d~i~----~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~ 213 (236)
T 3hl4_A 151 WTLTPEFLA----EHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDY 213 (236)
T ss_dssp SSCCHHHHH----HTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCCHHHHHHHHHHHH
T ss_pred CcCcHHHHH----HcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCCHHHHHHHHHHhH
Confidence 998888886 679999999999999888889999999999999999999999999999999764
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.6e-26 Score=226.31 Aligned_cols=146 Identities=31% Similarity=0.583 Sum_probs=130.4
Q ss_pred HhhhcccCCCCCeEEEEecccCcCCHHHHHHHHHHHHcCC--eEEEEEccchhhhccCC--CCCCCHHHHHHHHhcCccc
Q 016998 54 CFHKKKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGD--ELVVGVVSDEEIIANKG--PPVLSMEERLALVSGLKWV 129 (379)
Q Consensus 54 ~~~~~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d--~LiVgV~sd~~i~~~K~--~pi~t~eER~~~l~~~~~V 129 (379)
+|+.......+.++|++.|+||++|.||+.+|++|++++| +|+|||++|+.+++.|+ +|+++++||++++++|++|
T Consensus 187 ~f~~g~~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~v 266 (341)
T 3elb_A 187 QFASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYV 266 (341)
T ss_dssp HHCCCCCCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTSSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTC
T ss_pred eeccCCCCCCCCEEEEEecccCCCCHHHHHHHHHHHHhCCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCC
Confidence 5665544445678899999999999999999999999999 99999999998887776 6999999999999999999
Q ss_pred cEEEeCCCccccHHHHHHHhhccCccEEEEcCCCCCC-CCCchHHHHHHhCCeEEEeccCCCCCHHHHHHHHHhc
Q 016998 130 DEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLL-PDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (379)
Q Consensus 130 D~Vv~~~p~~~t~efl~~ll~~~~~d~VV~GdD~~~g-~~g~~~y~~lk~~g~~~~v~r~~~VSST~Ir~rI~~~ 203 (379)
|.|+.+.|+.++.+|++ +++++++|+|+||... ..|.+.|+..+..|+++.+++++++|||+|++||++.
T Consensus 267 d~V~v~~~~~l~~~~~~----~~~~~~iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~n 337 (341)
T 3elb_A 267 SEVVIGAPYAVTAELLS----HFKVDLVCHGKTEIIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITN 337 (341)
T ss_dssp CEEEEEECSSCCHHHHH----HTTCSEEEECSSCCCCCTTSCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC-
T ss_pred CCEEECCCCcchHHHHH----hcCCcEEEECCCCccccCCccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHHH
Confidence 99999999988888886 5799999999998753 4567889999999999999999999999999999854
No 4
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.91 E-value=3.7e-25 Score=206.75 Aligned_cols=122 Identities=32% Similarity=0.585 Sum_probs=107.0
Q ss_pred CCCCCCeEEEEcCccccCChHHHHHHHHHHhc--CCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHccCcCceEeC
Q 016998 251 GPGPNARVVYIDGAFDLFHAGHVEILKKARQL--GDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (379)
Q Consensus 251 ~~~~~~~~v~~~G~FDl~H~GHi~~L~~A~~~--gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~ 328 (379)
.+.+..++||++|+||+||.||+++|++|+++ +|+|||||++|+.+.+.|| +|+|+++||++++++|+|||+|+++
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg--~pi~s~eER~e~v~~~k~VD~Vvv~ 148 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG--FTVMNENERYDAVQHCRYVDEVVRN 148 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTC--CCSSCHHHHHHHHHTBTTCSEEESS
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCC--CCCCCHHHHHHHHHHhCCCCeEEEC
Confidence 34456788999999999999999999999999 5899999999998887787 5999999999999999999999999
Q ss_pred CCCCchHHHHHHcCCcEEEEcCCCCCC-------CCCCCCceEEEEeeeccee
Q 016998 329 APWEVTKDMITTFNICLVVHGTVSETN-------TPLTVSLQFLYLPLINYCI 374 (379)
Q Consensus 329 ~~~~~~~~~i~~~~~d~vv~G~d~~~~-------~~l~~~~evv~lp~~~~~~ 374 (379)
+||.++.+++++++||+++||+++... +.+...+.++++|++.++|
T Consensus 149 ~p~~l~~d~i~~~~~d~Vv~GDd~~~~~~~~d~y~~lk~~G~~~~v~rt~giS 201 (236)
T 3hl4_A 149 APWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGIS 201 (236)
T ss_dssp CCSSCCHHHHHHTTCCEEEEESSCCCCSSCSCTTHHHHHTTCEEEECCCTTCC
T ss_pred CcCcCcHHHHHHcCCCEEEECCccccCCCchhHHHHHHhCCeEEEeccCCCCC
Confidence 999999999999999999999886432 1234457789999998765
No 5
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.90 E-value=8e-24 Score=180.90 Aligned_cols=129 Identities=29% Similarity=0.466 Sum_probs=95.2
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccEEEeCCCccccHHH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~t~ef 144 (379)
|++++++|+||++|.||+.+|++|++.+++++|++.+|+.....+.+|+++.+||.+++++++++|.++...+++ +|
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWG---QK 77 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGG---GH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChH---HH
Confidence 457999999999999999999999999999999999987532212268999999999999998899998755553 56
Q ss_pred HHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCCeEEEeccCCCCCHHHHHHHHHhc
Q 016998 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (379)
Q Consensus 145 l~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~~~VSST~Ir~rI~~~ 203 (379)
++. +++++++++|+|+||. +.++.++..+++..+++...||||.||++|.++
T Consensus 78 ~~~-~~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~i~~~~~iSST~IR~~i~~g 129 (132)
T 2b7l_A 78 EDD-VEKFDVDVFVMGHDWE------GEFDFLKDKCEVIYLKRTEGISTTKIKQELYGK 129 (132)
T ss_dssp HHH-HHHTTCCEEEECGGGT------TTTGGGTTTSEEEECSSCC--------------
T ss_pred HHH-HHHcCCCEEEECCCCc------CcHHHHHhCCEEEEECCCCCcCHHHHHHHHHhc
Confidence 665 5678999999999993 234567888999999998899999999999865
No 6
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.90 E-value=1.3e-23 Score=178.70 Aligned_cols=127 Identities=34% Similarity=0.498 Sum_probs=105.3
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccEEEeCCCccccHHH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~t~ef 144 (379)
|++++++|+|||+|.||+.++++|++.+++++|++.+++.....+.+++++.+||.+++++++++|.++...+++ +|
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~---~~ 77 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWE---QK 77 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCST---TH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHH---HH
Confidence 457999999999999999999999999999999999987322112268999999999999998899988765554 56
Q ss_pred HHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCCeEEEeccCCCCCHHHHHHHHH
Q 016998 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRIL 201 (379)
Q Consensus 145 l~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~~~VSST~Ir~rI~ 201 (379)
++. +++++++++++|+||. +.++.+++.+++..+++...||||.||++|.
T Consensus 78 ~~~-l~~~~~~~iv~G~D~~------~~~~~L~~~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 78 KQD-IIDHNIDVFVMGDDWE------GKFDFLKDQCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp HHH-HHHTTCSEEEEEGGGT------TTTGGGTTTSEEEEECCCTTCCHHHHHHTC-
T ss_pred HHH-HHHhCCcEEEECCCCC------CcHHHHHhCCeEEEcCCCCCcCHHHHHHHHH
Confidence 654 4578999999999993 2345678889999999999999999999875
No 7
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.88 E-value=7.4e-23 Score=178.06 Aligned_cols=133 Identities=34% Similarity=0.451 Sum_probs=88.7
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccEEEeCCCccccHHH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~t~ef 144 (379)
|++++++|+|||+|.||+.+|++|+++++.++|++++|+.....+.+++++.+||.++++++++||.++...|. +|
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~----~f 77 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEG----DM 77 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTT----CH
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCch----hH
Confidence 67899999999999999999999999999999999988876542237899999999999999889999986543 36
Q ss_pred HHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCC-eEE--Eecc--CCCCCHHHHHHHHHhcc
Q 016998 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYK--QIKR--TEGVSSTDIVGRILSSM 204 (379)
Q Consensus 145 l~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g-~~~--~v~r--~~~VSST~Ir~rI~~~~ 204 (379)
++ ++++++++++|+|+||+|+.. ...+..++.| .+. .... .+.||||.||++|.+..
T Consensus 78 ~~-~~~~l~~~~iv~G~d~~f~~~--~l~~~~~~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~ 139 (143)
T 3glv_A 78 MK-TVIEVKPDIITLGYDQKFDEA--ELQSKINKLGITVKIVRISKYDGQLNSSSSVRKKIMELI 139 (143)
T ss_dssp HH-HHHHHCCSEEEECTTCHHHHH--HHHHHHHHHTCCCEEEECCCCC-----------------
T ss_pred HH-HHHhcCCCEEEECCCCCCCHH--HHHHHHHHcCCeEEEEEeeccCCCcCCHHHHHHHHHHHh
Confidence 54 566889999999999988421 1122223233 222 2222 35799999999998654
No 8
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=99.85 E-value=2.1e-21 Score=188.83 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=110.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEccchhhhcc----CC-CCCCCHHHHHHHHhcCccccEEEeC
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDE-----LVVGVVSDEEIIAN----KG-PPVLSMEERLALVSGLKWVDEVIAN 135 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~-----LiVgV~sd~~i~~~----K~-~pi~t~eER~~~l~~~~~VD~Vv~~ 135 (379)
..|+++|+|||+|+||+++|++|++.|+. +++++.++|..... +. +++++.+||.++++++ +||.++.
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l-GVD~v~~- 98 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE-GVEELYL- 98 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH-TCCEEEE-
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc-CCCEEEE-
Confidence 47999999999999999999999999854 45666665543221 12 5799999999999998 6999986
Q ss_pred CCcc-----cc-HHHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCCe--EEEecc----CCCCCHHHHHHHHHhc
Q 016998 136 APYA-----IT-EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVGR--YKQIKR----TEGVSSTDIVGRILSS 203 (379)
Q Consensus 136 ~p~~-----~t-~efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g~--~~~v~r----~~~VSST~Ir~rI~~~ 203 (379)
.||+ .+ ++|+++++++++++.+|+|+||+||. +.++.+.|++.|+ +..++. .+.||||.||+.|.++
T Consensus 99 ~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~DfrFG~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~G 177 (308)
T 3op1_A 99 LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYTFGS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILDG 177 (308)
T ss_dssp ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCCBTT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHHT
T ss_pred ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCCCCC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHcC
Confidence 4443 22 48998888889999999999999999 9999999998875 666665 3579999999999876
No 9
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.82 E-value=3e-20 Score=179.81 Aligned_cols=130 Identities=22% Similarity=0.301 Sum_probs=103.6
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEccchhhhccC-CCCCCCHHHHHHHHhcCccccEEEeCCCc---
Q 016998 68 VYMDGCFDLMHYGHANALRQAKALGDE-----LVVGVVSDEEIIANK-GPPVLSMEERLALVSGLKWVDEVIANAPY--- 138 (379)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~-----LiVgV~sd~~i~~~K-~~pi~t~eER~~~l~~~~~VD~Vv~~~p~--- 138 (379)
|+++|+|||+|.||+++|++|++.|+. +++++.+++.+...+ .+++++.+||.+++++++ ++.++. |
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~~---F~~~ 77 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVLD---FFRI 77 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEEC---HHHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEEE---hHHh
Confidence 689999999999999999999999864 466666656332222 267999999999999997 555544 3
Q ss_pred --cccHHHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCC-eEEEecc----CCCCCHHHHHHHHHhc
Q 016998 139 --AITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKR----TEGVSSTDIVGRILSS 203 (379)
Q Consensus 139 --~~t~efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g-~~~~v~r----~~~VSST~Ir~rI~~~ 203 (379)
...++|+++++ ++++++|+|+||+||.++.++.+.+++.| ++..++. +..||||.||++|.++
T Consensus 78 a~ls~~~Fi~~il--l~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 78 KDLTPEGFVERYL--SGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp TTCCHHHHHHHHC--TTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred hcCCHHHHHHHHh--cCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 12258888766 89999999999999999999999998754 6777765 3579999999999876
No 10
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.80 E-value=9.1e-20 Score=179.75 Aligned_cols=136 Identities=15% Similarity=0.222 Sum_probs=105.8
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCe-----EEEEEccchhhh--ccC-CCCCCCHHHHHHHHhcCccccEEEeCCC
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDE-----LVVGVVSDEEII--ANK-GPPVLSMEERLALVSGLKWVDEVIANAP 137 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~-----LiVgV~sd~~i~--~~K-~~pi~t~eER~~~l~~~~~VD~Vv~~~p 137 (379)
..|+++|+|||+|.||+++|++|++.|+. +++.+.+++... ..+ .+++++.+||.++++++ +||.++. .|
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~-gVD~v~v-~~ 93 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF-GIDGVLV-ID 93 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT-TCSEEEE-EC
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc-CCCEEEE-cc
Confidence 47999999999999999999999998854 344444443321 122 15699999999999998 6999876 33
Q ss_pred cc-----cc-HHHHHH-HhhccCccEEEEcCCCCCCCCCchHHHHHHhCC----eEEEecc----CCCCCHHHHHHHHHh
Q 016998 138 YA-----IT-EQFMNR-LFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG----RYKQIKR----TEGVSSTDIVGRILS 202 (379)
Q Consensus 138 ~~-----~t-~efl~~-ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g----~~~~v~r----~~~VSST~Ir~rI~~ 202 (379)
|+ .+ ++|+++ +.++++++++|+|+||+||.++.++.+.|++.+ ++..++. +..||||.||+.|.+
T Consensus 94 F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred ccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 32 22 489988 446799999999999999999999998888755 5666665 346999999999986
Q ss_pred c
Q 016998 203 S 203 (379)
Q Consensus 203 ~ 203 (379)
+
T Consensus 174 G 174 (338)
T 2x0k_A 174 G 174 (338)
T ss_dssp T
T ss_pred C
Confidence 6
No 11
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.78 E-value=5.3e-20 Score=162.93 Aligned_cols=108 Identities=21% Similarity=0.305 Sum_probs=96.3
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHH-ccCcCceEeCCCCCchH
Q 016998 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVTK 335 (379)
Q Consensus 257 ~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vii~~~~~~~~ 335 (379)
++++++|+|||+|.||++++++|++++|+|+|++.+|. .| +|+++.+||+.+++. ++.+|+|.+...++++.
T Consensus 3 ~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K---~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~~ 75 (157)
T 3nv7_A 3 KVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK---NPMFSLDERLKMIQLATKSFKNVECVAFEGLLA 75 (157)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCHH
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC---CCCCCHHHHHHHHHHHhcCCCcEEEEecCchHH
Confidence 68999999999999999999999999999999999884 34 589999999999977 79999998877778899
Q ss_pred HHHHHcCCcEEEEc----CCCCCC-------CCCCCCceEEEEeeec
Q 016998 336 DMITTFNICLVVHG----TVSETN-------TPLTVSLQFLYLPLIN 371 (379)
Q Consensus 336 ~~i~~~~~d~vv~G----~d~~~~-------~~l~~~~evv~lp~~~ 371 (379)
+++++++||++||| +||+++ ..+..++|++|||...
T Consensus 76 ~~~~~~~~~~ivrG~r~~~D~~ye~~~a~~n~~l~~~ietv~l~~~~ 122 (157)
T 3nv7_A 76 YLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTL 122 (157)
T ss_dssp HHHHHTTCCCBCCCCSCCCCHHHHHHHHHHHHHSSCCCCCCCCCCCH
T ss_pred HHHHHcCCCEEEECCcccchhhhhHHHHHHHHHhCCCceEEEEcCCc
Confidence 99999999999999 888877 2567889999998764
No 12
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.76 E-value=2.6e-18 Score=145.85 Aligned_cols=113 Identities=36% Similarity=0.549 Sum_probs=97.4
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHccCcCceEeCCCCCchHH
Q 016998 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKD 336 (379)
Q Consensus 257 ~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~~~~~~~~~ 336 (379)
+++++.|+||++|.||+.++++|++.+|.++|+++.|+... .|++ .|+++.+||+.++++|+++|.|++..++..+.+
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~d~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~~ 79 (129)
T 1coz_A 2 KKVITYGTFDLLHWGHIKLLERAKQLGDYLVVAISTDEFNL-QKQK-KAYHSYEHRKLILETIRYVDEVIPEKNWEQKKQ 79 (129)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHTTSSEEEEEEECHHHHH-HHTC-CCSSCHHHHHHHHTTBTTCCEEEEECCSTTHHH
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHHhCCCeEEEEECCHHHh-cCCC-CCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHHH
Confidence 57899999999999999999999999999999999986321 2443 589999999999999999999998777777778
Q ss_pred HHHHcCCcEEEEcCCCCCC-CCCCCCceEEEEeeec
Q 016998 337 MITTFNICLVVHGTVSETN-TPLTVSLQFLYLPLIN 371 (379)
Q Consensus 337 ~i~~~~~d~vv~G~d~~~~-~~l~~~~evv~lp~~~ 371 (379)
.++++++++++.|.||.++ +.+...++++.+|+..
T Consensus 80 ~l~~~~~~~iv~G~D~~~~~~~L~~~~~v~~~~~~~ 115 (129)
T 1coz_A 80 DIIDHNIDVFVMGDDWEGKFDFLKDQCEVVYLPRTE 115 (129)
T ss_dssp HHHHTTCSEEEEEGGGTTTTGGGTTTSEEEEECCCT
T ss_pred HHHHhCCcEEEECCCCCCcHHHHHhCCeEEEcCCCC
Confidence 8999999999999999755 4667778999999744
No 13
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.75 E-value=1.7e-18 Score=157.47 Aligned_cols=136 Identities=22% Similarity=0.259 Sum_probs=94.1
Q ss_pred cccCCCCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeCC
Q 016998 58 KKCGKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANA 136 (379)
Q Consensus 58 ~~~~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~~ 136 (379)
+.+....|+++++.|+||++|.||+.+|++|++++|+++++|.+++ .| +|+++.+||+++++. ++++|.+.. .
T Consensus 15 ~~~~~~~mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K-~~l~s~eeR~~ml~~~~~~v~~v~v-~ 88 (187)
T 3k9w_A 15 QTQGPGSMVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK-KPFFSLEERLKIANEVLGHYPNVKV-M 88 (187)
T ss_dssp -----CCCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTCTTEEE-E
T ss_pred hhcccCCcEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHHhccCCcEEE-E
Confidence 3344445789999999999999999999999999999999998864 23 589999999999998 578888766 2
Q ss_pred Cc-cccHHHHHHHhhccCccEEEEc----CCCCCCCCCchHHHHHHhCCeEEEeccC---CCCCHHHHHHHHHhc
Q 016998 137 PY-AITEQFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (379)
Q Consensus 137 p~-~~t~efl~~ll~~~~~d~VV~G----dD~~~g~~g~~~y~~lk~~g~~~~v~r~---~~VSST~Ir~rI~~~ 203 (379)
+| .++.+|+ ++++++++|+| .||.+...-......+...-+.+.+... ..||||.||+++..+
T Consensus 89 ~f~~~~~d~l----~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 159 (187)
T 3k9w_A 89 GFTGLLKDFV----RANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSDQYQFISGTIVREIAQLG 159 (187)
T ss_dssp EESSCHHHHH----HHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred echhhHHHHH----HHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEecccccccccHHHHHHHHHcC
Confidence 33 2334444 56899999999 6664221000000111112233444433 479999999999865
No 14
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.75 E-value=5.6e-18 Score=144.48 Aligned_cols=113 Identities=29% Similarity=0.523 Sum_probs=97.2
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHccCcCceEeCCCCCchHH
Q 016998 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKD 336 (379)
Q Consensus 257 ~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~~~~~~~~~ 336 (379)
+++++.|+||++|.||+.++++|++.+|.++|+++.|+... .|++ .|+++.+||+.++++++++|.|++..++..+.+
T Consensus 2 ~~~~~~G~FDp~H~GH~~li~~a~~~~~~~~v~v~~~~~~~-~~~~-~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~~ 79 (132)
T 2b7l_A 2 KRVITYGTYDLLHYGHIELLRRAREMGDYLIVALSTDEFNQ-IKHK-KSYYDYEQRKMMLESIRYVDLVIPEKGWGQKED 79 (132)
T ss_dssp CEEEEEECCCSCCHHHHHHHHHHHHTSSEEEEEEECHHHHH-HTTC-CCSSCHHHHHHHHHTBTTCCEEEEECCGGGHHH
T ss_pred eEEEEeeecCcCCHHHHHHHHHHHHhCCcEEEEEECCHHHh-ccCC-CCCCCHHHHHHHHHhcCCCCEEEECCChHHHHH
Confidence 57999999999999999999999999999999999987432 2443 589999999999999999999998666667778
Q ss_pred HHHHcCCcEEEEcCCCCCC-CCCCCCceEEEEeeec
Q 016998 337 MITTFNICLVVHGTVSETN-TPLTVSLQFLYLPLIN 371 (379)
Q Consensus 337 ~i~~~~~d~vv~G~d~~~~-~~l~~~~evv~lp~~~ 371 (379)
.++++++++++.|.|+..+ +.+...++++++|...
T Consensus 80 ~~~~~~~~~iv~G~D~~~~~~~L~~~~~v~~i~~~~ 115 (132)
T 2b7l_A 80 DVEKFDVDVFVMGHDWEGEFDFLKDKCEVIYLKRTE 115 (132)
T ss_dssp HHHHTTCCEEEECGGGTTTTGGGTTTSEEEECSSCC
T ss_pred HHHHcCCCEEEECCCCcCcHHHHHhCCEEEEECCCC
Confidence 8999999999999998765 4566678999998743
No 15
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.73 E-value=2.2e-18 Score=153.28 Aligned_cols=109 Identities=19% Similarity=0.302 Sum_probs=91.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHccCcCceEeCCCCCchH
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~~~~~~~~ 335 (379)
.++++++|+|||+|.||++++++|++++|+|+|++++|. .| +|+++.+||+.+++.+...|+|.+...++++.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K---~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK---DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-------------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 478999999999999999999999999999999999774 34 58999999999997764449888877778999
Q ss_pred HHHHHcCCcEEEEc----CCCCCCC-------CCCCCceEEEEeeec
Q 016998 336 DMITTFNICLVVHG----TVSETNT-------PLTVSLQFLYLPLIN 371 (379)
Q Consensus 336 ~~i~~~~~d~vv~G----~d~~~~~-------~l~~~~evv~lp~~~ 371 (379)
+++++++++++++| +||+++. .+..++|+++||...
T Consensus 78 ~~~~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~ 124 (162)
T 4f3r_A 78 DFAKTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPARE 124 (162)
T ss_dssp HHHHHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCG
T ss_pred HHHHHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCc
Confidence 99999999999999 6777662 466799999998764
No 16
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.71 E-value=1.5e-17 Score=145.52 Aligned_cols=128 Identities=16% Similarity=0.224 Sum_probs=92.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeCCCcc-ccHH
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA-ITEQ 143 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~-~t~e 143 (379)
+++++.|+|||+|.||+.++++|++.+|++++.+..++ .| +++++.+||++|++. +.++|.+... +++ ++.+
T Consensus 2 ~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~-~~~~~~~~ 75 (158)
T 1qjc_A 2 KRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEVV-GFSDLMAN 75 (158)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSCHHH
T ss_pred CEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEEc-ccchHHHH
Confidence 57999999999999999999999999999988888764 24 478999999999995 6788876652 232 3333
Q ss_pred HHHHHhhccCccEEEEcCCCCCCCCCchHHHHH-HhCC----eEEEeccC--CCCCHHHHHHHHHhc
Q 016998 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALA-KKVG----RYKQIKRT--EGVSSTDIVGRILSS 203 (379)
Q Consensus 144 fl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~l-k~~g----~~~~v~r~--~~VSST~Ir~rI~~~ 203 (379)
++++++++++++|.|+.++.........+ +..+ .+..++.. ..||||.||++|.++
T Consensus 76 ----~l~~l~~~~~v~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~iSST~IR~~i~~g 138 (158)
T 1qjc_A 76 ----FARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQ 138 (158)
T ss_dssp ----HHHHTTCCEEEEECCTTCCHHHHHHHHHHHHHHCTTSEEEEECCCGGGTTCCHHHHHHHHHTT
T ss_pred ----HHHHcCCCEEEEeccchhhhHHHHHHHHhCccCCCCCCEEEEECCCCCCccCHHHHHHHHHcC
Confidence 44567899999999987754333222211 2211 23333332 469999999999866
No 17
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.71 E-value=5.5e-18 Score=152.66 Aligned_cols=133 Identities=19% Similarity=0.083 Sum_probs=102.7
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEccchhhhccCC-CCCCCHHHHHHHHhc-CccccEEEeCCCcc--
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYA-- 139 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~-- 139 (379)
++++++|+|||+|.||+.++++|++.+ +.+++++++++. .|. +++++.+||++|++. +++++.+.. .+++
T Consensus 3 ~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v-~~~e~~ 78 (189)
T 2qtr_A 3 KIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSI-CLEELS 78 (189)
T ss_dssp EEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEE-CCTGGG
T ss_pred eEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEE-ehHHhc
Confidence 578999999999999999999999998 889999887663 343 579999999999995 667787765 3443
Q ss_pred -----ccHHHHHHHhhccCcc---EEEEcCCCCCCCCCchHHHHHHhCCeEEEeccC-----------------CCCCHH
Q 016998 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (379)
Q Consensus 140 -----~t~efl~~ll~~~~~d---~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~-----------------~~VSST 194 (379)
++.++++.+-.++ |+ ++|+|.|+.++..+++.++.+.+.+.+..++|. ..||||
T Consensus 79 ~~~~~~~~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~w~~~~~l~~~~~~~v~~r~~~~~~~~~~v~~~~~~~~~iSST 157 (189)
T 2qtr_A 79 RKGPSYTYDTMLQLTKKY-PDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPYPITTVEIPEFAVSSS 157 (189)
T ss_dssp SCSCCCHHHHHHHHHHHC-TTCEEEEEEEHHHHHHGGGSTTHHHHTTTCEEEEECCTTCCCCCSSCCEEECCCCCCCCHH
T ss_pred CCCCCCHHHHHHHHHHHC-CCCCEEEEEehhhhhhhhccCCHHHHHHhCCEEEEECCCCCccCCceEEEEcCCCCccCHH
Confidence 4445554433333 33 399999999988888889888888876666541 269999
Q ss_pred HHHHHHHhc
Q 016998 195 DIVGRILSS 203 (379)
Q Consensus 195 ~Ir~rI~~~ 203 (379)
.||+++.++
T Consensus 158 ~IR~~l~~g 166 (189)
T 2qtr_A 158 LLRERYKEK 166 (189)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999865
No 18
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.70 E-value=3e-17 Score=145.68 Aligned_cols=129 Identities=16% Similarity=0.152 Sum_probs=92.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeCCCccccHHH
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQF 144 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~~t~ef 144 (379)
++++++|+|||+|.||+.++++|++.+|+++|.+..++ .| +++++.+||++|++. +..+|.+.. .+++ +|
T Consensus 3 ~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~ 73 (169)
T 1o6b_A 3 SIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITV-ETSQ---GL 73 (169)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEE-EECS---SC
T ss_pred cEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEE-cccc---hH
Confidence 57999999999999999999999999999888776543 24 578999999999985 457776654 2232 23
Q ss_pred HHHHhhccCccEEEEcCCCCCCCCCchHHHHHHh----CCeEEEeccC---CCCCHHHHHHHHHhc
Q 016998 145 MNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKK----VGRYKQIKRT---EGVSSTDIVGRILSS 203 (379)
Q Consensus 145 l~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~----~g~~~~v~r~---~~VSST~Ir~rI~~~ 203 (379)
..+.+++++++++++|.|+.++..+......+.+ ..+...+... ..||||.||+++.++
T Consensus 74 ~~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (169)
T 1o6b_A 74 LIDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMANNQYSFLSSSIVKEVARYD 139 (169)
T ss_dssp HHHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEECCSTTTTCCHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEECCCCCCcCcHHHHHHHHHcC
Confidence 3334456789999999999877544333332222 1233332222 369999999999866
No 19
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.70 E-value=1.7e-17 Score=149.41 Aligned_cols=109 Identities=18% Similarity=0.288 Sum_probs=95.2
Q ss_pred CCCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCCC
Q 016998 254 PNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWE 332 (379)
Q Consensus 254 ~~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~~ 332 (379)
...++++++|+|||+|.||++++++|++++|+|+|++..|. .| +|.++.+||+.+++ +++..++|.+...++
T Consensus 19 ~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K---~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~ 91 (177)
T 3nbk_A 19 SHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK---TGMFDLDERIAMVKESTTHLPNLRVQVGHG 91 (177)
T ss_dssp -CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS---CCSSCHHHHHHHHHHHCTTCTTEEEEECCS
T ss_pred CCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC---CCCCCHHHHHHHHHHHhCCCCCEEEEecCc
Confidence 34689999999999999999999999999999999999763 34 48999999999997 579999999988888
Q ss_pred chHHHHHHcCCcEEEEc----CCCCCCC-------CCCCCceEEEEeee
Q 016998 333 VTKDMITTFNICLVVHG----TVSETNT-------PLTVSLQFLYLPLI 370 (379)
Q Consensus 333 ~~~~~i~~~~~d~vv~G----~d~~~~~-------~l~~~~evv~lp~~ 370 (379)
++.|++++++++++++| +||+++. .+ .++|++||+-.
T Consensus 92 l~vd~~~~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~ 139 (177)
T 3nbk_A 92 LVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATA 139 (177)
T ss_dssp CHHHHHHHTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECC
T ss_pred hHHHHHHHcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCC
Confidence 99999999999999999 7777762 35 78999999743
No 20
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.70 E-value=1.9e-16 Score=143.78 Aligned_cols=133 Identities=18% Similarity=0.049 Sum_probs=98.3
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEccchhhhccCC-CCCCCHHHHHHHHhc-CccccEEEeCCCcc--
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYA-- 139 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~-- 139 (379)
++++++|+|||+|.||+.++++|++.+ +.+++.+++++. .|. +++++.+||++|++. +++++.+.. .+++
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKL-ELVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEE-CCGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEE-eHHHhc
Confidence 578999999999999999999999998 888888887652 343 578999999999984 677887665 3333
Q ss_pred -----ccHHHHHHHhhccCcc---EEEEcCCCCCCCCCchHHHHHHhCCeEEEeccC-----------------CCCCHH
Q 016998 140 -----ITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSST 194 (379)
Q Consensus 140 -----~t~efl~~ll~~~~~d---~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~-----------------~~VSST 194 (379)
++.++++.+..++ |+ ++|+|.|+.++...+..++.+.+...+..++|. ..||||
T Consensus 84 ~~~~~~t~~~l~~l~~~~-p~~~~~~v~G~D~~~~~~~W~~~e~i~~~~~~~v~~R~g~~~~l~~~i~~~~~~~~~ISST 162 (194)
T 1kam_A 84 REGPSYTFDTVSLLKQRY-PNDQLFFIIGADMIEYLPKWYKLDELLNLIQFIGVKRPGFHVETPYPLLFADVPEFEVSST 162 (194)
T ss_dssp TTCCCSHHHHHHHHHHHS-TTSEEEEEEETTTTTTCCCCHHHHHHHHHSEEEEEECSSCCCCCSSCCEEEECCCBCCCHH
T ss_pred CCCCCChHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHHhCcEEEEECCCcchhcCCCEEEeCCCCCCcCHH
Confidence 5556666554444 44 999999999888888777766655555544442 269999
Q ss_pred HHHHHHHhc
Q 016998 195 DIVGRILSS 203 (379)
Q Consensus 195 ~Ir~rI~~~ 203 (379)
.||+++..+
T Consensus 163 ~IR~~i~~g 171 (194)
T 1kam_A 163 MIRERFKSK 171 (194)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHcC
Confidence 999999866
No 21
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.70 E-value=5.7e-17 Score=140.81 Aligned_cols=95 Identities=25% Similarity=0.419 Sum_probs=85.6
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHccCcCceEeCCCCCchH
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTK 335 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~~~~~~~~ 335 (379)
+++|++.|+||++|.||+.+|++|++++|.++|+++.|+...+ |++ .|+++.+||..++++|++||.|++.++.+. .
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~~~~~v~v~~~~~~~~-~~~-~~l~~~~eR~~~l~~~~~vd~v~~~~~~~f-~ 78 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLGDELVVVVARDSTARN-NGK-IPIFDENSRLALISELKVVDRAILGHEGDM-M 78 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTSSEEEEEECCHHHHHH-TTC-CCSSCHHHHHHHHTTBTTCSEEEECCTTCH-H
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhCCCcEEEEECCcchhh-cCC-CCCCCHHHHHHHHHhcCCCCEEEEcCchhH-H
Confidence 4789999999999999999999999999999999999987664 443 699999999999999999999999888774 5
Q ss_pred HHHHHcCCcEEEEcCCCC
Q 016998 336 DMITTFNICLVVHGTVSE 353 (379)
Q Consensus 336 ~~i~~~~~d~vv~G~d~~ 353 (379)
+++++++++++|+|.|+.
T Consensus 79 ~~~~~l~~~~iv~G~d~~ 96 (143)
T 3glv_A 79 KTVIEVKPDIITLGYDQK 96 (143)
T ss_dssp HHHHHHCCSEEEECTTCH
T ss_pred HHHHhcCCCEEEECCCCC
Confidence 789999999999999974
No 22
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.69 E-value=3.5e-17 Score=148.71 Aligned_cols=109 Identities=20% Similarity=0.296 Sum_probs=94.8
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHH-ccCcCceEeCCCCCch
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vii~~~~~~~ 334 (379)
.+++++.|+||++|.||+.++++|++++|+|+|+|.+|. .| +|+++.+||+.+++. ++.+|.|.+.+..+++
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~d~viv~v~~~p----~K---~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~~ 94 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIFDTLVVGVADSR----AK---KPFFSLEERLKIANEVLGHYPNVKVMGFTGLL 94 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECCG----GG---CCSSCHHHHHHHHHHHHTTCTTEEEEEESSCH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHCCcEEEEEecCC----cc---CCCCCHHHHHHHHHHHhccCCcEEEEechhhH
Confidence 579999999999999999999999999999999999873 34 589999999999988 6999999887767889
Q ss_pred HHHHHHcCCcEEEEc----CCCCCC-------CCCCCCceEEEEeeec
Q 016998 335 KDMITTFNICLVVHG----TVSETN-------TPLTVSLQFLYLPLIN 371 (379)
Q Consensus 335 ~~~i~~~~~d~vv~G----~d~~~~-------~~l~~~~evv~lp~~~ 371 (379)
.+++++++++++|+| .||+++ ..+..++|+++++...
T Consensus 95 ~d~l~~l~~~~iv~G~r~~~Df~~E~~la~~nr~l~~~ietv~l~~~~ 142 (187)
T 3k9w_A 95 KDFVRANDARVIVRGLRAVSDFEYEFQMAGMNRYLLPDVETMFMTPSD 142 (187)
T ss_dssp HHHHHHTTCSEEEEECCTTSCHHHHHHHHHHHHHHCTTCEEEEECCCG
T ss_pred HHHHHHcCCCEEEECCCcccccchHHHHHHHHHHhCCCCcEEEEeccc
Confidence 999999999999999 666554 2456789999998653
No 23
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.68 E-value=7e-18 Score=149.30 Aligned_cols=126 Identities=20% Similarity=0.223 Sum_probs=89.8
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeCCCc-cccH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPY-AITE 142 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~~p~-~~t~ 142 (379)
|+++++.|+||++|.||+.++++|++++|+|+|++.+++ .| +|+++.+||++|++. ++.++.+... +| ....
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v~-~~~~l~~ 75 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVECV-AFEGLLA 75 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEEE-EECSCHH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhCCceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEEE-ecCchHH
Confidence 468999999999999999999999999999999998875 24 589999999999987 5677776541 22 2234
Q ss_pred HHHHHHhhccCccEEEEc----CCCCCCCCCchHHHHHHhCC---eEEEeccCC---CCCHHHHHHHHHhc
Q 016998 143 QFMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVG---RYKQIKRTE---GVSSTDIVGRILSS 203 (379)
Q Consensus 143 efl~~ll~~~~~d~VV~G----dD~~~g~~g~~~y~~lk~~g---~~~~v~r~~---~VSST~Ir~rI~~~ 203 (379)
+|+ ++++++++|.| .||.+..+- ...-+... +.+.+..++ .+|||.||+.+..+
T Consensus 76 ~~~----~~~~~~~ivrG~r~~~D~~ye~~~---a~~n~~l~~~ietv~l~~~~~~~~iSSt~vRe~~~~g 139 (157)
T 3nv7_A 76 YLA----KEYHCKVLVRGLRVVSDFEYELQM---GYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHK 139 (157)
T ss_dssp HHH----HHTTCCCBCCCCSCCCCHHHHHHH---HHHHHHSSCCCCCCCCCCCHHHHTCCHHHHHHHHHTT
T ss_pred HHH----HHcCCCEEEECCcccchhhhhHHH---HHHHHHhCCCceEEEEcCCcccceeeHHHHHHHHHcC
Confidence 554 46899999999 676321100 00111222 223333333 79999999998855
No 24
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.68 E-value=2.7e-17 Score=146.22 Aligned_cols=130 Identities=18% Similarity=0.204 Sum_probs=85.9
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccEEEeCCCccccHHH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDEVIANAPYAITEQF 144 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~t~ef 144 (379)
|+++++.|+||++|.||+.++++|++++|+++|++..++ .| +|+++.+||++|++.+...+.+........+.++
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~~~ 79 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEVLPLTGLLVDF 79 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHHHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHHHH
Confidence 568999999999999999999999999999999999775 34 6899999999999875444655442212234455
Q ss_pred HHHHhhccCccEEEEc----CCCCCCCCCchHHHHHHhCCeEEEeccC---CCCCHHHHHHHHHhc
Q 016998 145 MNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (379)
Q Consensus 145 l~~ll~~~~~d~VV~G----dD~~~g~~g~~~y~~lk~~g~~~~v~r~---~~VSST~Ir~rI~~~ 203 (379)
+ ++++++++|.| .||....+-......+...-+.+.+... ..||||.||+++..+
T Consensus 80 ~----~~~~~~~~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g 141 (162)
T 4f3r_A 80 A----KTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLG 141 (162)
T ss_dssp H----HHTTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred H----HHcCCCEEEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCcccccccHHHHHHHHHcC
Confidence 5 46799999999 5552100000000011112234444443 379999999999865
No 25
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.65 E-value=8.8e-16 Score=134.59 Aligned_cols=122 Identities=22% Similarity=0.276 Sum_probs=85.4
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCC-CCCCCHHHHHHHHhc-CccccEEEeCCCccccHHHH
Q 016998 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANAPYAITEQFM 145 (379)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~~t~efl 145 (379)
+++.|+|||+|.||+.++++|++.+|++++.+..++ .|. +++++.++|++|++. +.++|.+.. .+++ +|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e---~~~ 74 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEA-ATFS---GLL 74 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEE-EEEC---SCH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEE-EecC---chH
Confidence 899999999999999999999999999888887554 233 468999999999985 567776654 2332 144
Q ss_pred HHHhhccCccEEEEcCCCCCCCCCchHHHHHH-------hC---Ce-EEEecc--CCCCCHHHHHHHHHhc
Q 016998 146 NRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-------KV---GR-YKQIKR--TEGVSSTDIVGRILSS 203 (379)
Q Consensus 146 ~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk-------~~---g~-~~~v~r--~~~VSST~Ir~rI~~~ 203 (379)
.+++++++++++++|.|. +++++.++ .. .. +..+.. ...||||.||+++.++
T Consensus 75 ~~~l~~l~~~~~v~G~d~------~~~~~~~~~~~~~~r~~~~~~~~i~~~~~~~~~~ISST~IR~~l~~G 139 (160)
T 1od6_A 75 VDFVRRVGAQAIVKGLRA------VSDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYG 139 (160)
T ss_dssp HHHHHHTTCSEEEEEECT------TSCHHHHHHHHHHHHHHTTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHHHHcCCCEEEEeCCc------ccchHHHHHHHHhCcCCCCCCCEEEEeCCCCCCcccHHHHHHHHHcC
Confidence 344567899999999873 22222222 11 12 222322 2469999999999866
No 26
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.64 E-value=2e-16 Score=141.85 Aligned_cols=108 Identities=15% Similarity=0.347 Sum_probs=88.4
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEe-CCCCCc
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVII-GAPWEV 333 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii-~~~~~~ 333 (379)
.++++++|+|||+|.||+.++++|++.+|+|+|++..+. .| +|+++.+||+.+++ +++.+++|.+ ...++.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK---QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-------------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC---CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 368999999999999999999999999999999997663 34 48999999999997 5799999988 666789
Q ss_pred hHHHHHHcCCcEEEEc----CCCCCC-------CCCCCCceEEEEeee
Q 016998 334 TKDMITTFNICLVVHG----TVSETN-------TPLTVSLQFLYLPLI 370 (379)
Q Consensus 334 ~~~~i~~~~~d~vv~G----~d~~~~-------~~l~~~~evv~lp~~ 370 (379)
+.+++++++++++++| .||+++ ..+..++++++++-.
T Consensus 75 tvd~~~~l~~~~~i~G~~~~~d~~~e~~la~~nr~l~~~~etv~l~~~ 122 (171)
T 3nd5_A 75 TVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAE 122 (171)
T ss_dssp HHHHHHHHTCCEEEEEECSHHHHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHHCCCCEEEECCCchhhhHHHHHHHHHhhhhcCCccEEEEeCC
Confidence 9999999999999999 555544 134567899999643
No 27
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.62 E-value=8.3e-16 Score=137.39 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=85.0
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeCCCccccHH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYAITEQ 143 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~~t~e 143 (379)
++++++.|+||++|.||+.++++|++.+|+++|++..++ .| +++++.+||++|++. ++..+.+....--.++.+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~tvd 77 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLLVD 77 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCHHH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCHHH
Confidence 468999999999999999999999999999999998754 34 589999999999985 455565443211134556
Q ss_pred HHHHHhhccCccEEEEcCCCCCCCCCchHHH----HHHhCCeEEEeccC---CCCCHHHHHHHHHhc
Q 016998 144 FMNRLFNEHKIDYIIHGDDPCLLPDGTDAYA----LAKKVGRYKQIKRT---EGVSSTDIVGRILSS 203 (379)
Q Consensus 144 fl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~----~lk~~g~~~~v~r~---~~VSST~Ir~rI~~~ 203 (379)
+++ ++++++++.|-|-......+-... .+....+.+.+..+ ..||||.||+++..+
T Consensus 78 ~~~----~l~~~~~I~G~d~~~d~~~e~~~a~~~r~l~~~~e~v~l~~~p~~~~ISST~IRe~~~~g 140 (168)
T 3f3m_A 78 YCE----QVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTNYSFISSSIVKEVAAYR 140 (168)
T ss_dssp HHH----HHTCCEEEEEECTTCCHHHHHHHHHHHHHHCTTSEEEEEECCTTTTTCCHHHHHHHHHTT
T ss_pred HHH----HcCCCEEEEcCCchhhhhHHHHHhHHhHhhCCCCcEEEEeCCcccccccHHHHHHHHHcC
Confidence 654 568999999955322211110000 11111122222222 249999999999865
No 28
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.62 E-value=7.4e-16 Score=141.89 Aligned_cols=92 Identities=18% Similarity=0.229 Sum_probs=74.8
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEccchhhhccCCCCCCCHHHHHHHHh-cCccccEEEeCCCc------
Q 016998 68 VYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY------ 138 (379)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD~Vv~~~p~------ 138 (379)
+++.|+|||+|.||+.++++|++.+ |++++.+++++. .|..++++.+||++|++ +++.++.+.. .++
T Consensus 6 ~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v-~~~e~~~~~ 81 (213)
T 1k4m_A 6 ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTL-DERELKRNA 81 (213)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEE-CCHHHHCSS
T ss_pred EEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEE-eHHHhcCCC
Confidence 8999999999999999999999998 888888887653 24346899999999998 5667777765 233
Q ss_pred -cccHHHHHHHhhccCcc---EEEEcCCC
Q 016998 139 -AITEQFMNRLFNEHKID---YIIHGDDP 163 (379)
Q Consensus 139 -~~t~efl~~ll~~~~~d---~VV~GdD~ 163 (379)
.++.+|++.+.++++++ ++++|.|.
T Consensus 82 ~s~t~~~l~~l~~~~~~~~~~~~i~G~D~ 110 (213)
T 1k4m_A 82 PSYTAQTLKEWRQEQGPDVPLAFIIGQDS 110 (213)
T ss_dssp CCCHHHHHHHHHHHHCTTSCEEEEEEHHH
T ss_pred CCcHHHHHHHHHHHhCCCCcEEEEEehhh
Confidence 35678888776667899 99999974
No 29
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.60 E-value=1.5e-15 Score=135.81 Aligned_cols=108 Identities=18% Similarity=0.244 Sum_probs=89.6
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHH-ccCcCceEeCCCCCch
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVDEVIIGAPWEVT 334 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd~Vii~~~~~~~ 334 (379)
++++++.|+|||+|.||+.++++|++.+|.|+|+++.+. .| +|+++.+||+.+++. ++..+.|.+...++.+
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~d~viv~v~~~p----~K---~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNS----KK---EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGSSEEEEEECC------------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhCCEEEEEEcCCC----CC---CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 578999999999999999999999999999999999763 34 489999999999975 6889998887777899
Q ss_pred HHHHHHcCCcEEEEc----CCCCCC-------CCCCCCceEEEEeee
Q 016998 335 KDMITTFNICLVVHG----TVSETN-------TPLTVSLQFLYLPLI 370 (379)
Q Consensus 335 ~~~i~~~~~d~vv~G----~d~~~~-------~~l~~~~evv~lp~~ 370 (379)
.|++++++++++++| .||+++ ..+..++++++++-.
T Consensus 76 vd~~~~l~~~~~I~G~d~~~d~~~e~~~a~~~r~l~~~~e~v~l~~~ 122 (168)
T 3f3m_A 76 VDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSS 122 (168)
T ss_dssp HHHHHHHTCCEEEEEECTTCCHHHHHHHHHHHHHHCTTSEEEEEECC
T ss_pred HHHHHHcCCCEEEEcCCchhhhhHHHHHhHHhHhhCCCCcEEEEeCC
Confidence 999999999999999 555544 134457899998754
No 30
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.59 E-value=3.3e-15 Score=134.51 Aligned_cols=133 Identities=17% Similarity=0.152 Sum_probs=90.7
Q ss_pred CCCCCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeCCCcc
Q 016998 61 GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIANAPYA 139 (379)
Q Consensus 61 ~~~~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~~p~~ 139 (379)
...+|+++++.|+||++|.||+.++++|++++|+|+|++..++ .| +++++.+||++|++. ++..+.+.+..-..
T Consensus 17 ~~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~ 91 (177)
T 3nbk_A 17 RGSHMTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQVGHG 91 (177)
T ss_dssp ---CCCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEECCS
T ss_pred CCCCCEEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEecCc
Confidence 3455779999999999999999999999999999999998765 34 489999999999985 55566554422223
Q ss_pred ccHHHHHHHhhccCccEEEEcCCCCCCCCCchH----HHHHHhCCeEEEec---cCCCCCHHHHHHHHHhc
Q 016998 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDA----YALAKKVGRYKQIK---RTEGVSSTDIVGRILSS 203 (379)
Q Consensus 140 ~t~efl~~ll~~~~~d~VV~GdD~~~g~~g~~~----y~~lk~~g~~~~v~---r~~~VSST~Ir~rI~~~ 203 (379)
++.+|++ ++++++++.|-+...+.+.+-. ...+ ..-+.+.+. ....||||.||+++..+
T Consensus 92 l~vd~~~----~~~a~~ivrGlr~~~Dfeye~~~a~~nr~l-~~ietvfl~~~~~~~~ISST~IRe~~~~g 157 (177)
T 3nbk_A 92 LVVDFVR----SCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLG 157 (177)
T ss_dssp CHHHHHH----HTTCCEEEEEECTTCCHHHHHHHHHHHHHH-HCCEEEEEECCGGGSSCCHHHHHHHHHTT
T ss_pred hHHHHHH----HcCCCEEEECCCchhHHHHHHHHHHHHHhc-CCCceEEEeCCCcccccchHHHHHHHHcC
Confidence 4556664 5799999999332111111100 1112 333433332 23479999999998755
No 31
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.58 E-value=1.4e-15 Score=136.26 Aligned_cols=124 Identities=22% Similarity=0.255 Sum_probs=85.0
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEe-CCCccccH
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA-NAPYAITE 142 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~-~~p~~~t~ 142 (379)
|+++++.|+||++|.||+.++++|++++|+++|++..++ .| +|+++.+||++|++. ++.++.+.. ..--..+.
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~tv 76 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTV 76 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSCHH
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHCCCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCcHH
Confidence 468999999999999999999999999999999997654 34 489999999999984 566776644 22113455
Q ss_pred HHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHH-------h---CCe-EEEec--cCCCCCHHHHHHHHHhc
Q 016998 143 QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAK-------K---VGR-YKQIK--RTEGVSSTDIVGRILSS 203 (379)
Q Consensus 143 efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk-------~---~g~-~~~v~--r~~~VSST~Ir~rI~~~ 203 (379)
++++ ++++++++.|-|. ..+++... . ..+ +.... ....||||.||+++..+
T Consensus 77 d~~~----~l~~~~~i~G~~~------~~d~~~e~~la~~nr~l~~~~etv~l~~~~~~~~ISST~IRe~~~~g 140 (171)
T 3nd5_A 77 ESAK----SLGANFLIRGIRN------VKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFG 140 (171)
T ss_dssp HHHH----HHTCCEEEEEECS------HHHHHHHHHHHHHHHHHCTTSEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHHH----HCCCCEEEECCCc------hhhhHHHHHHHHHhhhhcCCccEEEEeCCccccccchHHHHHHHHcC
Confidence 6665 5689999999442 12222111 1 122 22222 23479999999999865
No 32
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.53 E-value=2e-14 Score=135.38 Aligned_cols=94 Identities=23% Similarity=0.328 Sum_probs=75.4
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEccchhhhccCCCCCCCHHHHHHHHh-cCccccEEEeCCCc---
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPY--- 138 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD~Vv~~~p~--- 138 (379)
++++++.|+||++|.||+.++++|++.+ |++++++..++. .|..++++.++|++|++ ++.+++.+.+. ++
T Consensus 23 ~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 98 (242)
T 1yum_A 23 KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTVD-PRELQ 98 (242)
T ss_dssp CEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEEC-CGGGG
T ss_pred ceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEEe-eeeec
Confidence 4678999999999999999999999998 899998888752 24457899999999998 46677777652 33
Q ss_pred ----cccHHHHHHHhhccCcc---EEEEcCC
Q 016998 139 ----AITEQFMNRLFNEHKID---YIIHGDD 162 (379)
Q Consensus 139 ----~~t~efl~~ll~~~~~d---~VV~GdD 162 (379)
.++.++++.+-.+++|+ ++++|.|
T Consensus 99 ~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D 129 (242)
T 1yum_A 99 RDKPSYTIDTLESVRAELAADDQLFMLIGWD 129 (242)
T ss_dssp SSSSCCHHHHHHHHHHHSCTTCEEEEEEEHH
T ss_pred CCCCCCHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 36678887665666677 8999986
No 33
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.53 E-value=1.7e-14 Score=129.14 Aligned_cols=124 Identities=25% Similarity=0.295 Sum_probs=86.5
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHh-cCccccEEEeCCCcc-ccHH
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVS-GLKWVDEVIANAPYA-ITEQ 143 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~-~~~~VD~Vv~~~p~~-~t~e 143 (379)
-++++.|+||++|.||+.++++|++.+|+|+|++.+++ .| +++++.+||++|++ +++.++.+... +++ ++.+
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~tvd 86 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKVD-VHHGLLVD 86 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEEE-EECSCHHH
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEEe-cCcchHHH
Confidence 36999999999999999999999999999999999864 23 48899999999998 68777766542 232 4555
Q ss_pred HHHHHhhccCccEEEEc----CCCCCCCCCchHHHHHHh----CCeEEEecc---CCCCCHHHHHHHHHhc
Q 016998 144 FMNRLFNEHKIDYIIHG----DDPCLLPDGTDAYALAKK----VGRYKQIKR---TEGVSSTDIVGRILSS 203 (379)
Q Consensus 144 fl~~ll~~~~~d~VV~G----dD~~~g~~g~~~y~~lk~----~g~~~~v~r---~~~VSST~Ir~rI~~~ 203 (379)
+++ ++++++++.| .||.. .-......+ ..+...+.. .+.+|||.||+++..+
T Consensus 87 ~l~----~l~~~~~i~gl~~w~d~~~----~~~~~~~~r~~~~~~~~i~l~~~~~~~~iSST~IR~~i~~g 149 (173)
T 1vlh_A 87 YLK----KHGIKVLVRGLRAVTDYEY----ELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYG 149 (173)
T ss_dssp HHH----HHTCCEEEEEECTTSCHHH----HHHHHHHHHHHSTTCEEEEEECCGGGTTCCHHHHHHHHHTT
T ss_pred HHH----HhCCCeEEeCCCcccchhh----ccchhhcCCCCCCCCcEEEEeCCCCCCceeHHHHHHHHHcC
Confidence 554 5688999988 33310 000111111 122222222 3469999999999865
No 34
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.52 E-value=2.7e-14 Score=128.99 Aligned_cols=134 Identities=17% Similarity=0.123 Sum_probs=95.1
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEccchhhhccCC-CCCCCHHHHHHHHhc-CccccEEEeCC-----
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKG-PPVLSMEERLALVSG-LKWVDEVIANA----- 136 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~-~pi~t~eER~~~l~~-~~~VD~Vv~~~----- 136 (379)
+++++.|+|||+|.||+.++++|++.+ |.+++.+++++. .|+ +++++.+||++|++. ++..+.+....
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~~ 79 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKR 79 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhcC
Confidence 578999999999999999999999987 888877776653 243 578999999999984 55555444321
Q ss_pred -CccccHHHHHHHhhccCcc---EEEEcCCCCCCCCCchHHHHHHhCCeEEEeccC-----------------CCCCHHH
Q 016998 137 -PYAITEQFMNRLFNEHKID---YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRT-----------------EGVSSTD 195 (379)
Q Consensus 137 -p~~~t~efl~~ll~~~~~d---~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~-----------------~~VSST~ 195 (379)
...++.++++.+...+ ++ +++.|.|.-.....+..++.+-....+..+.|. ..||||.
T Consensus 80 ~~~syt~dtl~~l~~~~-p~~~~~~i~G~D~~~~~~~W~~~~~i~~~~~~~v~~R~~~~~~~~~~i~~~~~~~~~ISST~ 158 (189)
T 2h29_A 80 GGQSYTYDTIKAFKEQH-KDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTM 158 (189)
T ss_dssp CSBCCHHHHHHHHHHHS-TTEEEEEEEEHHHHTTGGGSTTHHHHHHHCEEEEECCSSSCCCCCTTSEEECCCCBCCCHHH
T ss_pred CCCCCHHHHHHHHHHHC-CCCcEEEEEecchhhhhccccCHHHHHhhCcEEEEECCCCccccCCcEEEEcCCCCccCHHH
Confidence 2335667777655444 66 899999864433334444555445555555552 2599999
Q ss_pred HHHHHHhc
Q 016998 196 IVGRILSS 203 (379)
Q Consensus 196 Ir~rI~~~ 203 (379)
||+++..+
T Consensus 159 IR~~i~~g 166 (189)
T 2h29_A 159 IRQRVSEG 166 (189)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999865
No 35
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.52 E-value=2.5e-14 Score=128.02 Aligned_cols=108 Identities=24% Similarity=0.297 Sum_probs=88.6
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCCCch
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVT 334 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~~~~ 334 (379)
..++++.|+|||+|.||+.++++|++++|+|+|+++++. .| +|+++.+||+.+++ +++.++.|.+.+.++.+
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~D~viv~v~~~~----~k---k~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 84 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENP----RK---KCMFTLEERKKLIEEVLSDLDGVKVDVHHGLL 84 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTCSEEEEEEECCT----TC---CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHCCEEEEEEeCCC----CC---CCCCCHHHHHHHHHHHhcCCCCEEEecCcchH
Confidence 358999999999999999999999999999999999873 23 48999999999997 79999999887666689
Q ss_pred HHHHHHcCCcEEEEc----CCCCCCC-------CCCCCceEEEEeee
Q 016998 335 KDMITTFNICLVVHG----TVSETNT-------PLTVSLQFLYLPLI 370 (379)
Q Consensus 335 ~~~i~~~~~d~vv~G----~d~~~~~-------~l~~~~evv~lp~~ 370 (379)
.+++++++++++++| .||+... ....++++++++..
T Consensus 85 vd~l~~l~~~~~i~gl~~w~d~~~~~~~~~~~r~~~~~~~~i~l~~~ 131 (173)
T 1vlh_A 85 VDYLKKHGIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVFLIAS 131 (173)
T ss_dssp HHHHHHHTCCEEEEEECTTSCHHHHHHHHHHHHHHSTTCEEEEEECC
T ss_pred HHHHHHhCCCeEEeCCCcccchhhccchhhcCCCCCCCCcEEEEeCC
Confidence 999999999999999 4443321 12235778887654
No 36
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.46 E-value=1.7e-13 Score=133.04 Aligned_cols=131 Identities=16% Similarity=0.138 Sum_probs=88.2
Q ss_pred CCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCccccE----E--EeCCC
Q 016998 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKWVDE----V--IANAP 137 (379)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~VD~----V--v~~~p 137 (379)
.|++++++|+||++|.||+.++++|++.+|+++|++.+++.. .+....++.++|++|++.. ..|. + +....
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p--~~~~~~~~~~~R~~m~~~~-~~~~~~~~~~~i~~~d 82 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVA--ADTRNPWRSPERMAMIEAC-LSPQILKRVHFLTVRD 82 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCC--CCSSSCSCHHHHHHHHHTT-SCHHHHTTEEEEEEEC
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccC--CCCCCCCCHHHHHHHHHHH-hhhccCCeEEEEECCC
Confidence 357899999999999999999999999999888878776532 2333458999999999974 2332 2 22111
Q ss_pred --cccc--HHHHHHHhhccC---ccEEEEcCCCCCCCCCchHHHHHHhC--CeEEEeccCCCCCHHHHHHHHHhc
Q 016998 138 --YAIT--EQFMNRLFNEHK---IDYIIHGDDPCLLPDGTDAYALAKKV--GRYKQIKRTEGVSSTDIVGRILSS 203 (379)
Q Consensus 138 --~~~t--~efl~~ll~~~~---~d~VV~GdD~~~g~~g~~~y~~lk~~--g~~~~v~r~~~VSST~Ir~rI~~~ 203 (379)
+... .+|.+++++.+. ++++++|.++... . ...+.. -+...++....||||.||+++.++
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~----~--~~~~~~~~~~~~~~~~~~~iSST~IR~~l~~g 151 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDAS----S--YYLNLFPQWDYLETGHYPDFSSTAIRGAYFEG 151 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGG----G--GGGGSCTTSEEEECCCCTTCCHHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCC----h--HHHHhccccceeecccCCCCCcHHHHHHHHcC
Confidence 1111 366555544433 7899999887311 1 112222 245555545789999999999866
No 37
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.45 E-value=1.3e-13 Score=124.14 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=95.0
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-Ccccc--EEEeC-------
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVD--EVIAN------- 135 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD--~Vv~~------- 135 (379)
+++++.|+||++|.||+.+++ |.+..|++++++..+. +.| +++.+.++|++|++. ++... .+...
T Consensus 3 ~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~~---~~k-~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~~l~ 77 (177)
T 3h05_A 3 KIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIAH---AWG-KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQALY 77 (177)
T ss_dssp EEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHHHHC
T ss_pred EEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCCC---CCC-CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhhhcc
Confidence 578999999999999999998 7777799999888752 223 568999999999985 22211 12210
Q ss_pred -CC-ccccHHHHHHHhhccC-cc-EEEEcCCCCCCCCCchHHHHHHhCCeEEEeccCCCCCHHHHHHHHHhc
Q 016998 136 -AP-YAITEQFMNRLFNEHK-ID-YIIHGDDPCLLPDGTDAYALAKKVGRYKQIKRTEGVSSTDIVGRILSS 203 (379)
Q Consensus 136 -~p-~~~t~efl~~ll~~~~-~d-~VV~GdD~~~g~~g~~~y~~lk~~g~~~~v~r~~~VSST~Ir~rI~~~ 203 (379)
.. ..+|.+.++.+.+.+. .+ ++++|.|.-.+-..+..++.+-+...+..++|...||||+||++|.++
T Consensus 78 ~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 78 QPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp ----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCSSCCCHHHHHHHHHHT
T ss_pred cCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEcCCCCCcHHHHHHHHHcC
Confidence 11 3456677776655552 33 689999965554556667777777889999998899999999999876
No 38
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.43 E-value=6e-13 Score=119.48 Aligned_cols=126 Identities=16% Similarity=0.162 Sum_probs=83.5
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcC-ccc----cEEE-eCCC-c
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGL-KWV----DEVI-ANAP-Y 138 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~-~~V----D~Vv-~~~p-~ 138 (379)
++++++|+|||+|.||+.++++|++.+|+++|++.++.. ..|++++++.+||+++++.. ... +.+. .... +
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d~~ 81 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSIRDPFTAGERVMMLTKALSENGIPASRYYIIPVQDI 81 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECCCC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCCCCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecCcc
Confidence 379999999999999999999999999999888844432 23345678999999999863 222 2332 2221 1
Q ss_pred ccc---HHHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCC-eEEEeccCC--CCCHHHHHHHHHhc
Q 016998 139 AIT---EQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTE--GVSSTDIVGRILSS 203 (379)
Q Consensus 139 ~~t---~efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g-~~~~v~r~~--~VSST~Ir~rI~~~ 203 (379)
... .+|++++. ..++.+++|.|+ ..+.++..+ ++..++..+ .||||.||+++..+
T Consensus 82 ~~~~~w~~~~~~l~--~~~~~~v~gr~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~l~~G 142 (181)
T 1ej2_A 82 ECNALWVGHIKMLT--PPFDRVYSGNPL--------VQRLFSEDGYEVTAPPLFYRDRYSGTEVRRRMLDD 142 (181)
T ss_dssp SCHHHHHHHHHHHS--CCCSEEECCCHH--------HHHHHHHTTCCEECCCCSSTTTSSHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHC--CCCCEEEECCHH--------HHHHHHhCCeEEEecCCCccCcCcHHHHHHHHHcC
Confidence 111 14444432 367889999764 112233333 445555433 59999999999866
No 39
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.41 E-value=8e-13 Score=115.29 Aligned_cols=92 Identities=18% Similarity=0.331 Sum_probs=79.3
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCCCch
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVT 334 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~~~~ 334 (379)
++++++.|+||++|.||+.++++|++.+|.+++.++.|. .| .++++.+||+.+++ +++.+|.+.+.+....+
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~d~v~v~~~~~p----~k---~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~ 73 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASP----SK---KPMFTLEERVALAQQATAHLGNVEVVGFSDLM 73 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTSSEEEEEEESCC----SS---CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhCCEEEEEECCCC----CC---CCCCCHHHHHHHHHHHHhcCCCeEEcccchHH
Confidence 368999999999999999999999999999999998873 34 37899999999997 58999998886655678
Q ss_pred HHHHHHcCCcEEEEcCCCCC
Q 016998 335 KDMITTFNICLVVHGTVSET 354 (379)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~ 354 (379)
.++++++++++++.|.|.-.
T Consensus 74 ~~~l~~l~~~~~v~G~d~~~ 93 (158)
T 1qjc_A 74 ANFARNQHATVLIRGLRAVA 93 (158)
T ss_dssp HHHHHHTTCCEEEEECCTTC
T ss_pred HHHHHHcCCCEEEEeccchh
Confidence 89999999999999976433
No 40
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.39 E-value=2.1e-12 Score=127.81 Aligned_cols=92 Identities=23% Similarity=0.240 Sum_probs=74.7
Q ss_pred CCeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchh--hhccCC-CCCCCHHHHHHHHhcCccccEEEeCCCccc
Q 016998 64 KRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEE--IIANKG-PPVLSMEERLALVSGLKWVDEVIANAPYAI 140 (379)
Q Consensus 64 ~~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~--i~~~K~-~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~ 140 (379)
.++.|+++|.|||+|.||+.+|++|++ .+ +++.|.+.+. +. ++ +.+++.++|.++++.+ +||.|++ .|+.+
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~~~-GvD~vie-lpF~~ 124 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAIRA-GADIVVE-GPPMG 124 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHHHH-TCSEEEE-CCCGG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHHHC-CCCEEEE-cCchh
Confidence 356899999999999999999999999 55 5666666443 32 33 6799999999999997 9999997 55533
Q ss_pred c---HHHHHH---HhhccCccEEEEcC
Q 016998 141 T---EQFMNR---LFNEHKIDYIIHGD 161 (379)
Q Consensus 141 t---~efl~~---ll~~~~~d~VV~Gd 161 (379)
. ++|++. ++.++++++||+|.
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~ 151 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGY 151 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 2 589876 77889999999998
No 41
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.37 E-value=1.2e-13 Score=120.83 Aligned_cols=124 Identities=23% Similarity=0.333 Sum_probs=83.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC-CeEEEEEccchhhhccCCCCCCCHHHHHHHHhcC--cc----ccEEEeCCCcc
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKALG-DELVVGVVSDEEIIANKGPPVLSMEERLALVSGL--KW----VDEVIANAPYA 139 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~-d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~--~~----VD~Vv~~~p~~ 139 (379)
++++.|+||++|.||..++++|++++ |+++|++.+++...+ +..++++.+||++|++.. +. +..+-...+|.
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~~g 80 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-RIRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNPYG 80 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-HSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECSTTT
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-cCCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCCCC
Confidence 58999999999999999999999997 899999999986522 236899999999998863 21 22222334443
Q ss_pred ccHHHHHHHhhccCccEEEEcCCCCCCCCCchHH-HHHHhCC----eEEEecc-----CCCCCHHHHHHHHHh
Q 016998 140 ITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAY-ALAKKVG----RYKQIKR-----TEGVSSTDIVGRILS 202 (379)
Q Consensus 140 ~t~efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y-~~lk~~g----~~~~v~r-----~~~VSST~Ir~rI~~ 202 (379)
.+. .-++|++|++.+-..+ .... +..++.| ++..++. ...||||.||+++..
T Consensus 81 ~~~--------~~~~d~ivvs~Et~~~---~~~l~~~~~~~G~~~l~V~~v~~~~~~~~~~iSST~IR~~~id 142 (148)
T 3do8_A 81 KTL--------DVDFEYLVVSPETYEM---ALKINQKREELGKRKITIVKVDWMMAEDGKPISSTRIKRGEID 142 (148)
T ss_dssp TTT--------TSCCSEEEECTTTHHH---HHHHHHHHHHHTCCCCEEEEEECCC-------CCCCCCCSCCC
T ss_pred CCC--------CCCCCEEEEChhhccc---HHHHHHHHHHcCCCeeEEEEeccEEcCCCCEEEHHHHHHHHHh
Confidence 332 2478999999875321 1112 2223333 3444443 245999999998764
No 42
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.33 E-value=4.6e-12 Score=112.10 Aligned_cols=107 Identities=16% Similarity=0.314 Sum_probs=86.2
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCCCch
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVT 334 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~~~~ 334 (379)
++++++.|+||++|.||+.++++|++.+|.++|.+..+. .| .++++.+||+.+++ +++.+|.+.+.+....+
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~d~v~v~~~~~p----~k---~~l~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 74 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNS----SK---KPLFSVEERCELLREVTKDIPNITVETSQGLL 74 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHSSEEEEEECCCC----SS---CCSSCHHHHHHHHHHHHTTCTTEEEEECSSCH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhCCEEEEEECCCC----cc---CCCCCHHHHHHHHHHHHhcCCCEEEcccchHH
Confidence 368999999999999999999999999999999888542 24 47899999999997 46889998886655788
Q ss_pred HHHHHHcCCcEEEEcCCCCCC-----------CCCCCCceEEEEee
Q 016998 335 KDMITTFNICLVVHGTVSETN-----------TPLTVSLQFLYLPL 369 (379)
Q Consensus 335 ~~~i~~~~~d~vv~G~d~~~~-----------~~l~~~~evv~lp~ 369 (379)
.++++.+++++++.|.|.-.+ .....++++++++.
T Consensus 75 ~~~l~~l~~~~~i~G~d~~~~~~~~~~~~~~~r~~~~~~~~i~~~~ 120 (169)
T 1o6b_A 75 IDYARRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMA 120 (169)
T ss_dssp HHHHHHTTCSEEEEEECSGGGHHHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred HHHHHHcCCCEEEEcCccccchHHHHHHHHHhccccCCCCEEEEEC
Confidence 899999999999999875432 11223677777754
No 43
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.32 E-value=1.7e-11 Score=108.74 Aligned_cols=125 Identities=21% Similarity=0.333 Sum_probs=78.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhc-Ccccc-EEE--eCCCccccH
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVD-EVI--ANAPYAITE 142 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD-~Vv--~~~p~~~t~ 142 (379)
++++.|+||++|.||+.++++|++.+|+++|++.+... ..|+.+.++.+||++|++. ++..+ .+. .-..+....
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~~~ 79 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK--SHTLENPFTAGERILMITQSLKDYDLTYYPIPIKDIEFNS 79 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSSSCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSCGG
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC--CCCCCCCCCHHHHHHHHHHHHhcCCCceEEEeeCCcccHH
Confidence 58999999999999999999999999999998833321 2233346799999999985 43333 232 111121122
Q ss_pred ---HHHHHHhhccCccEEEEcCCCCCCCCCchHHHHHHhCC-eEEEeccCC--CCCHHHHHHHHHhc
Q 016998 143 ---QFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIKRTE--GVSSTDIVGRILSS 203 (379)
Q Consensus 143 ---efl~~ll~~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g-~~~~v~r~~--~VSST~Ir~rI~~~ 203 (379)
++++++ ...++.++.|.++ ....+...+ .+...+..+ .||||.||+++..+
T Consensus 80 ~w~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~~~~~~~ISST~IR~~~~~g 136 (168)
T 1f9a_A 80 IWVSYVESL--TPPFDIVYSGNPL--------VRVLFEERGYEVKRPEMFNRKEYSGTEIRRRMLNG 136 (168)
T ss_dssp GHHHHHHHH--SCCCSEEECCCHH--------HHHHHHHTTCEEECCCCCSTTTSSHHHHHHHHHHT
T ss_pred HHHHHHHHh--ccCCCEEEECcHH--------HHHhhhhcCcEEEeCCccccCcccHHHHHHHHHcC
Confidence 233322 2356777766432 112233322 334444333 59999999999865
No 44
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=99.29 E-value=7.5e-12 Score=120.18 Aligned_cols=86 Identities=15% Similarity=0.103 Sum_probs=57.6
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCe-----EEEE-EccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEeC--
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDE-----LVVG-VVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIAN-- 135 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~-----LiVg-V~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~~-- 135 (379)
+++++++|+||++|.||+.++++|++.++. ++++ +.+.+ ....| +++++.++|++|++. +...+.+...
T Consensus 8 ~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~-~~~~K-~~l~s~~~R~~ml~~ai~~~~~~~v~~~ 85 (279)
T 1kqn_A 8 EVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVG-DAYKK-KGLIPAYHRVIMAELATKNSKWVEVDTW 85 (279)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECC-GGGCC-TTCCCHHHHHHHHHHHTTTCSSEEECCT
T ss_pred ceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCC-CCccc-cCCCCHHHHHHHHHHHhcCCCcEEEecc
Confidence 567899999999999999999999998632 5443 22222 12233 568999999999985 4556655542
Q ss_pred ----CCccccHHHHHHHhhcc
Q 016998 136 ----APYAITEQFMNRLFNEH 152 (379)
Q Consensus 136 ----~p~~~t~efl~~ll~~~ 152 (379)
..+.+|.+.++.+-+++
T Consensus 86 E~~~~~~syTidtL~~l~~~~ 106 (279)
T 1kqn_A 86 ESLQKEWKETLKVLRHHQEKL 106 (279)
T ss_dssp GGGCSSCCCHHHHHHHHHHHH
T ss_pred ccccCCCCcHHHHHHHHHHHH
Confidence 12344556665554445
No 45
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.27 E-value=1.4e-11 Score=107.68 Aligned_cols=89 Identities=18% Similarity=0.284 Sum_probs=74.8
Q ss_pred EEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCCCchHHH
Q 016998 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPWEVTKDM 337 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~~~~~~~ 337 (379)
+++.|+||++|.||+.++++|++.+|.++|.++.+. .|.. .++++.++|+.+++ +++.+|.+.+.+..+.+.++
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~d~v~v~~~~~p----~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~~~ 77 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENP----SKRG-QYLFSAEERLAIIREATAHLANVEAATFSGLLVDF 77 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHSSEEEEEEECC----------CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCHHHH
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHCCEEEEEEcCCC----CCCC-CCCCCHHHHHHHHHHHhcCCCCEEEEecCchHHHH
Confidence 789999999999999999999999999999998663 2321 36899999999997 56889988886655688999
Q ss_pred HHHcCCcEEEEcCCC
Q 016998 338 ITTFNICLVVHGTVS 352 (379)
Q Consensus 338 i~~~~~d~vv~G~d~ 352 (379)
++++++++++.|.|.
T Consensus 78 l~~l~~~~~v~G~d~ 92 (160)
T 1od6_A 78 VRRVGAQAIVKGLRA 92 (160)
T ss_dssp HHHTTCSEEEEEECT
T ss_pred HHHcCCCEEEEeCCc
Confidence 999999999999763
No 46
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=99.27 E-value=2.7e-13 Score=129.99 Aligned_cols=114 Identities=15% Similarity=0.184 Sum_probs=79.8
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCC---CCCCCHHHHHHHHhcCccccEEEeCCCcccc-H
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPYAIT-E 142 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~Vv~~~p~~~t-~ 142 (379)
++.+.|+||++|.||+.+|++|++.+|.++|++.++|.-...+. +.+.+.++|.++++++ +||.++.....++. +
T Consensus 23 ~V~~vgtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~-GVD~vf~p~~~~m~p~ 101 (280)
T 2ejc_A 23 TIGFVPTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE-NVDCIFHPSVEEMYPP 101 (280)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT-TCSEEECCCHHHHSCT
T ss_pred EEEEEcCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC-CCCEEEeCCHHHCCCc
Confidence 46666999999999999999999999999999976665322111 3467899999999998 59999973211111 1
Q ss_pred HHH--------HH-HhhccCccE------------EEEc-CCCCCCCCCchHHHHHHhCCe
Q 016998 143 QFM--------NR-LFNEHKIDY------------IIHG-DDPCLLPDGTDAYALAKKVGR 181 (379)
Q Consensus 143 efl--------~~-ll~~~~~d~------------VV~G-dD~~~g~~g~~~y~~lk~~g~ 181 (379)
+|. .. +..+++|.+ .++| +|++||.++.+....+++.++
T Consensus 102 ~f~~~v~~~~~~~~l~G~~rp~hF~Gv~tvv~kLf~iv~p~~~~FG~kd~qq~~~l~~~~~ 162 (280)
T 2ejc_A 102 DFSTYVEETKLSKHLCGRSRPGHFRGVCTVVTKLFNIVKPHRAYFGQKDAQQFRVLRRMVR 162 (280)
T ss_dssp TCCCCCCCCSGGGTTTGGGSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHH
T ss_pred CceEEEEcCCcceEEecCCCCCeecceEEEEeeeceeccCceEEeCCCCCcCHHHHHHHHH
Confidence 232 11 112334443 4444 499999999998888887653
No 47
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=99.23 E-value=1.9e-11 Score=115.44 Aligned_cols=88 Identities=14% Similarity=0.088 Sum_probs=56.9
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCe----EEEEEccchhhhccCCCCCCCHHHHHHHHhc-CccccEEEe-----
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDE----LVVGVVSDEEIIANKGPPVLSMEERLALVSG-LKWVDEVIA----- 134 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~----LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~-~~~VD~Vv~----- 134 (379)
+++++++|+||++|.||+.++++|++.++. .+|++...+.....+++++++.++|++|++. +...+.+..
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E~ 85 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWES 85 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHHH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHHh
Confidence 567899999999999999999999998743 4543232222112222468999999999984 333333332
Q ss_pred -CCCccccHHHHHHHhhcc
Q 016998 135 -NAPYAITEQFMNRLFNEH 152 (379)
Q Consensus 135 -~~p~~~t~efl~~ll~~~ 152 (379)
...+.+|.+.++.+-+++
T Consensus 86 ~~~~~syTidtL~~l~~~~ 104 (252)
T 1nup_A 86 EQAQWMETVKVLRHHHSKL 104 (252)
T ss_dssp HSSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHH
Confidence 123445556665554444
No 48
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.17 E-value=9.4e-11 Score=110.23 Aligned_cols=111 Identities=19% Similarity=0.143 Sum_probs=87.8
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCC
Q 016998 255 NARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW 331 (379)
Q Consensus 255 ~~~~v~~~G~FDl~H~GHi~~L~~A~~~g--d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~ 331 (379)
.++++++.|+||++|.||+.++++|++.+ |.++|+++.|.. .|+ .++++.++|+.+++ +++.++.|.+.+.+
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~--~~~~~~~~R~~ml~~a~~~~~~v~v~~~e 96 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRE--TPQVSAAQRLAMVERAVAGVERLTVDPRE 96 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGS--CTTCCHHHHHHHHHHHHTTCTTEEECCGG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCC--CCCCCHHHHHHHHHHHhcCCCeEEEeeee
Confidence 35789999999999999999999999988 999999998852 242 47899999999997 68899999886533
Q ss_pred ------CchHHHHHHc----CCc---EEEEcCC-------CCCCCCCCCCceEEEEeee
Q 016998 332 ------EVTKDMITTF----NIC---LVVHGTV-------SETNTPLTVSLQFLYLPLI 370 (379)
Q Consensus 332 ------~~~~~~i~~~----~~d---~vv~G~d-------~~~~~~l~~~~evv~lp~~ 370 (379)
..+.+.++.+ +|+ +++.|.| |..-+.+-..+.++.+++.
T Consensus 97 ~~~~~~sytvdtl~~l~~~~~p~~~~~fI~G~D~l~~l~~W~~~~~i~~~~~~vv~~R~ 155 (242)
T 1yum_A 97 LQRDKPSYTIDTLESVRAELAADDQLFMLIGWDAFCGLPTWHRWEALLDHCHIVVLQRP 155 (242)
T ss_dssp GGSSSSCCHHHHHHHHHHHSCTTCEEEEEEEHHHHTTGGGSTTGGGSTTTCEEEEEECS
T ss_pred ecCCCCCCHHHHHHHHHHHhCCCCcEEEEEehhHhhhhhhhcCHHHHHhhCcEEEEECC
Confidence 5888988776 688 7999964 4433344456777777765
No 49
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.17 E-value=5.3e-11 Score=107.71 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=72.8
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCC-
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW- 331 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~g--d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~- 331 (379)
++++++.|+||++|.||+.++++|++.+ |.+++.++.+.. .|+. .++++.+||+.+++ +++.+|.+.+.+.+
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 82 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQN-EDYTDSFHRVEMLKLAIQSNPSFKLELVEM 82 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC-------------CHHHHHHHHHHHHTTCTTEEECCGGG
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCC-cCCCCHHHHHHHHHHHHcCCCCeEEeHHHh
Confidence 4789999999999999999999999988 999999987752 3432 46899999999997 68999998885432
Q ss_pred -----CchHHHHHHcCCc------EEEEcCCCCCC
Q 016998 332 -----EVTKDMITTFNIC------LVVHGTVSETN 355 (379)
Q Consensus 332 -----~~~~~~i~~~~~d------~vv~G~d~~~~ 355 (379)
..+.+.++.++.. ++|.|.|+-.+
T Consensus 83 ~~~~~~~t~~~l~~l~~~~p~~~~~~v~G~D~~~~ 117 (194)
T 1kam_A 83 EREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEY 117 (194)
T ss_dssp STTCCCSHHHHHHHHHHHSTTSEEEEEEETTTTTT
T ss_pred cCCCCCChHHHHHHHHHHCCCCcEEEEEecchhhh
Confidence 4677777777655 99999886543
No 50
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.12 E-value=4.4e-11 Score=107.27 Aligned_cols=92 Identities=17% Similarity=0.114 Sum_probs=75.0
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCC-
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW- 331 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~g--d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~- 331 (379)
++++++.|+||++|.||+.++++|++.+ |.+++.++++.. .|+. .++++.+||+.+++ +++.+|.+.+.+.+
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~ml~~~~~~~~~v~v~~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQG-RNITSVESRLQMLELATEAEEHFSICLEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTT-SCCCCHHHHHHHHHHHHTTCTTEEECCTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccC-CCCCCHHHHHHHHHHHhCCCCCEEEehHHh
Confidence 3689999999999999999999999988 999999997753 2432 46899999999997 57899999886543
Q ss_pred -----CchHHHHHHcCCcE------EEEcCC
Q 016998 332 -----EVTKDMITTFNICL------VVHGTV 351 (379)
Q Consensus 332 -----~~~~~~i~~~~~d~------vv~G~d 351 (379)
..+.+.++.++..+ ++.|.|
T Consensus 78 ~~~~~~~~~~~l~~l~~~~p~~~~~~v~G~D 108 (189)
T 2qtr_A 78 SRKGPSYTYDTMLQLTKKYPDVQFHFIIGGD 108 (189)
T ss_dssp GSCSCCCHHHHHHHHHHHCTTCEEEEEEEHH
T ss_pred cCCCCCCHHHHHHHHHHHCCCCCEEEEEehh
Confidence 57788888887665 999965
No 51
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.09 E-value=9.8e-11 Score=102.32 Aligned_cols=106 Identities=19% Similarity=0.303 Sum_probs=76.3
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcC-CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHH-c-cC----cCceEeCCC
Q 016998 258 VVYIDGAFDLFHAGHVEILKKARQLG-DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-C-RY----VDEVIIGAP 330 (379)
Q Consensus 258 ~v~~~G~FDl~H~GHi~~L~~A~~~g-d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~-~-~~----Vd~Vii~~~ 330 (379)
.|++.|+||++|.||+.++++|++++ |.|+|++++|....+ | ..|+++.+||+.+++. + +. +.-+-+.++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~~~~~k-~--~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i~D~ 78 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSDRMARA-R--IRSVLPFAIRAENVKRYVMRKYGFEPEIVKITNP 78 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECHHHHHH-H--SCCCSCHHHHHHHHHHHHHHHHSSCCEEEEECST
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCCccccc-c--CCCCCCHHHHHHHHHHHHhcccCCcEEEEeecCC
Confidence 47899999999999999999999987 999999999986532 2 1589999999988855 4 32 222334556
Q ss_pred CCchHHHHHHcCCcEEEEcCCCCCC-CC-----CCCCc---eEEEEeee
Q 016998 331 WEVTKDMITTFNICLVVHGTVSETN-TP-----LTVSL---QFLYLPLI 370 (379)
Q Consensus 331 ~~~~~~~i~~~~~d~vv~G~d~~~~-~~-----l~~~~---evv~lp~~ 370 (379)
++.+. .-++|++|.+.+.... .. .+.|. +++..|..
T Consensus 79 ~g~~~----~~~~d~ivvs~Et~~~~~~l~~~~~~~G~~~l~V~~v~~~ 123 (148)
T 3do8_A 79 YGKTL----DVDFEYLVVSPETYEMALKINQKREELGKRKITIVKVDWM 123 (148)
T ss_dssp TTTTT----TSCCSEEEECTTTHHHHHHHHHHHHHHTCCCCEEEEEECC
T ss_pred CCCCC----CCCCCEEEEChhhcccHHHHHHHHHHcCCCeeEEEEeccE
Confidence 66553 4688999988765432 11 12345 77776654
No 52
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.09 E-value=8.4e-11 Score=107.99 Aligned_cols=90 Identities=16% Similarity=0.129 Sum_probs=73.6
Q ss_pred eE-EEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCCC-
Q 016998 257 RV-VYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAPW- 331 (379)
Q Consensus 257 ~~-v~~~G~FDl~H~GHi~~L~~A~~~g--d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~~- 331 (379)
++ +++.|+||++|.||+.++++|++.+ |.+++.++.+.. .|. .++++.+||+.+++ +++.+|.|.+.+.+
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~--~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~ 77 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRP--QPEANSVQRKHMLELAIADKPLFTLDEREL 77 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSC--CCSSCHHHHHHHHHHHHTTCTTEEECCHHH
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCC--CCCCCHHHHHHHHHHHhccCCCEEEeHHHh
Confidence 46 8999999999999999999999887 899998887743 242 36899999999997 78999999885422
Q ss_pred -----CchHHHHHHc----CCc---EEEEcCC
Q 016998 332 -----EVTKDMITTF----NIC---LVVHGTV 351 (379)
Q Consensus 332 -----~~~~~~i~~~----~~d---~vv~G~d 351 (379)
..+.++++.+ +++ +++.|.|
T Consensus 78 ~~~~~s~t~~~l~~l~~~~~~~~~~~~i~G~D 109 (213)
T 1k4m_A 78 KRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQD 109 (213)
T ss_dssp HCSSCCCHHHHHHHHHHHHCTTSCEEEEEEHH
T ss_pred cCCCCCcHHHHHHHHHHHhCCCCcEEEEEehh
Confidence 4567777766 899 9999964
No 53
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.08 E-value=1.1e-09 Score=107.89 Aligned_cols=129 Identities=21% Similarity=0.214 Sum_probs=82.1
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhh-----hccCCCCCCCHHHHHHHHhc-CccccE-EE----
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-----IANKGPPVLSMEERLALVSG-LKWVDE-VI---- 133 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i-----~~~K~~pi~t~eER~~~l~~-~~~VD~-Vv---- 133 (379)
++++++.|+||++|.||+.++++|++.+|+|+|++.+++.. ...+.+..++.+||++|++. ++..+. +.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v~~~ 81 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHL 81 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEEEEe
Confidence 35799999999999999999999999999999999998752 11111234999999999974 343222 11
Q ss_pred eCCCccc----c---HHHHHHHhh--ccCccEEEEcCCCCCCCCCchHHHHHHhCC-eEEEec--c-CCCCCHHHHHHHH
Q 016998 134 ANAPYAI----T---EQFMNRLFN--EHKIDYIIHGDDPCLLPDGTDAYALAKKVG-RYKQIK--R-TEGVSSTDIVGRI 200 (379)
Q Consensus 134 ~~~p~~~----t---~efl~~ll~--~~~~d~VV~GdD~~~g~~g~~~y~~lk~~g-~~~~v~--r-~~~VSST~Ir~rI 200 (379)
.+.+... . .+.+..++. .++++.++.++++. .....+..+ +.+.++ + ...||||.||+..
T Consensus 82 ~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~-------~~~~~~~~~~e~v~l~~~~~~~~iSsT~IRe~~ 154 (365)
T 1lw7_A 82 VEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQD-------KAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTP 154 (365)
T ss_dssp ECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGG-------HHHHHHHTCCEEECCCSSCCSSCCCHHHHHHCG
T ss_pred ccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCC-------HHHHHHHcCCceEEeCCcccCCCCCHHHHHhCh
Confidence 1111111 0 122333444 36788777665541 112334444 444444 2 3579999999865
No 54
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.01 E-value=1.4e-10 Score=114.38 Aligned_cols=110 Identities=19% Similarity=0.233 Sum_probs=76.6
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcch-----hccCCCCCCCCCHHHHHHHHH-HccCcCc-eEeC
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIV-----SEHRGSYHPIMHLHERSLSVL-ACRYVDE-VIIG 328 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v-----~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~-Vii~ 328 (379)
++++++.|+|||+|.||+.++++|++.+|+|+|++.+++.- +..+.+ +| ++.+||+.+++ +++..+. |.+.
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~v~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~R~~m~~~~~~~~~~~~~v~ 79 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKVDELHVIVCSDTVRDLKLFYDSKMK-RM-PTVQDRLRWMQQIFKYQKNQIFIH 79 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTCSEEEEEEEECHHHHHHHHHHTTCS-SC-CCHHHHHHHHHHHTSTTTTTEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHCCEEEEEECCCCccccccccccccC-CC-CCHHHHHHHHHHHhhcCCCcEEEE
Confidence 46899999999999999999999999999999999999742 111112 34 89999999984 6687766 5543
Q ss_pred CCCC---------------chHHHHH--HcCCcEEEEcCCCCC-C--CCCCCCceEEEEee
Q 016998 329 APWE---------------VTKDMIT--TFNICLVVHGTVSET-N--TPLTVSLQFLYLPL 369 (379)
Q Consensus 329 ~~~~---------------~~~~~i~--~~~~d~vv~G~d~~~-~--~~l~~~~evv~lp~ 369 (379)
...+ ....+++ ..++++++.+..+.. . ..+ +++++++|-
T Consensus 80 ~~~~~~~~~y~~~~~~~~~~~~~~i~~~~~~~~~~~~~e~~~~~~~~~~~--~~e~v~l~~ 138 (365)
T 1lw7_A 80 HLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYL--GLEVSLVDP 138 (365)
T ss_dssp EEECSSSCCTTSCHHHHHHHHHHHHHHTTCCCSEEECSCGGGHHHHHHHT--CCEEECCCS
T ss_pred EeccCCCCCCchHHHHHHHHHHHHhhccCCCCcEEEECCCCCHHHHHHHc--CCceEEeCC
Confidence 2100 0112233 368888886655432 1 122 789999983
No 55
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.00 E-value=2e-09 Score=104.94 Aligned_cols=130 Identities=12% Similarity=0.121 Sum_probs=81.1
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCc-c-----cc-EEEeC-C
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-W-----VD-EVIAN-A 136 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~-----VD-~Vv~~-~ 136 (379)
++++++.|+||++|.||+.++++|++.+|+++|++.+++.. .+..+.++.+||++|++..- . .. +++.. .
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~--~~~~~~~~~~~R~~m~~~~~~~~~~~~~~~~~~~~~d 84 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNT--PNIKNPFSFEQRKQMIESDLQVAGIDLDTVVIEPLAD 84 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCC--CCSSSCSCHHHHHHHHHHHHHHTTCCGGGEEEEEEEC
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCC--cccCCCCCHHHHHHHHHHHhccccCccceEEEEEcCC
Confidence 46799999999999999999999999999999999886532 12246689999999998531 1 11 22221 1
Q ss_pred C-cc--ccHHHHHHHhhc---cCccEEEEcCCCCCCCCCchHHHHHHhCC--eEEEeccCCCCCHHHHHHHHHh
Q 016998 137 P-YA--ITEQFMNRLFNE---HKIDYIIHGDDPCLLPDGTDAYALAKKVG--RYKQIKRTEGVSSTDIVGRILS 202 (379)
Q Consensus 137 p-~~--~t~efl~~ll~~---~~~d~VV~GdD~~~g~~g~~~y~~lk~~g--~~~~v~r~~~VSST~Ir~rI~~ 202 (379)
. +. ...+++++.+.+ +..+.+++|..- +...+ .+.... ....++....+|||.||+++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~-----~~~~~-~~~~~~~~~~~~~~~~~~iSST~IR~~~~~ 152 (352)
T 2qjt_B 85 YFYQEQKWQDELRKNVYKHAKNNNSIAIVGHIK-----DSSSY-YIRSFPEWDYIGVDNYKNFNATEFRQKFYN 152 (352)
T ss_dssp CTTCHHHHHHHHHHHHTTTSCSSCCEEECCBSS-----SSHHH-HHHHCTTSEECCBCCTTCCCHHHHHHHHHT
T ss_pred CcCChHHHHHHHHHHHHHhcccCCeEEEEcCCC-----Ccchh-hhhcCCccceeccCCCCCCCchHHHHHHhc
Confidence 1 11 112444332221 235677777541 11222 222222 2233334467999999999985
No 56
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=98.91 E-value=6.7e-11 Score=113.08 Aligned_cols=128 Identities=19% Similarity=0.172 Sum_probs=90.3
Q ss_pred CeEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhcc-CC--CCCCCHHHHHHHHhcCccccEEEeCCCcc-c
Q 016998 65 RVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIAN-KG--PPVLSMEERLALVSGLKWVDEVIANAPYA-I 140 (379)
Q Consensus 65 ~~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~-K~--~pi~t~eER~~~l~~~~~VD~Vv~~~p~~-~ 140 (379)
-.-|.|.|+ +|.||+.||++|++.++.++|++.++|.-... .. +.+.+.++|.++++++ +||.++. .+++ +
T Consensus 19 i~~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~-GvD~vf~-p~f~~m 93 (276)
T 1v8f_A 19 VGFVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA-GVDLLFA-PGVEEM 93 (276)
T ss_dssp EEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT-TCSEEEC-CCHHHH
T ss_pred ceEEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC-CCCEEEe-CChHhC
Confidence 346789999 99999999999999999999999998864322 21 4689999999999997 7999986 2221 1
Q ss_pred c-HHHHHHHhhccCccEEEEcC----------------------C-CCCCCCCchHHHHHHhCCe-------EE--Eecc
Q 016998 141 T-EQFMNRLFNEHKIDYIIHGD----------------------D-PCLLPDGTDAYALAKKVGR-------YK--QIKR 187 (379)
Q Consensus 141 t-~efl~~ll~~~~~d~VV~Gd----------------------D-~~~g~~g~~~y~~lk~~g~-------~~--~v~r 187 (379)
+ ++|...++...+++.+++|. | ++||.++.+....+++.++ ++ +.-|
T Consensus 94 ~p~~f~~~v~~~~~~~~vl~G~~RpghF~GV~TVv~kLf~iv~Pd~~~FG~kd~qq~~~l~~~~~dl~~~v~iv~~p~vr 173 (276)
T 1v8f_A 94 YPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVR 173 (276)
T ss_dssp SCTTCCEEEEECSHHHHSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHHHHTCCCEEEEECCCB
T ss_pred CCcCCeEEEEecCCcceEEecCCCCCeecceeehhhHhhcccCCCEEEECCCCCcCHHHHHHHHHHcCCeEEEEecCcEE
Confidence 1 12322111113455566676 8 9999999988888887653 23 2222
Q ss_pred C---CCCCHHHHH
Q 016998 188 T---EGVSSTDIV 197 (379)
Q Consensus 188 ~---~~VSST~Ir 197 (379)
. ..+|||.|+
T Consensus 174 ~~dGlaiSSrnir 186 (276)
T 1v8f_A 174 EEDGLALSSRNVY 186 (276)
T ss_dssp CTTSCBCCGGGGG
T ss_pred cCCCCEeEEeEEE
Confidence 2 248999886
No 57
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=98.89 E-value=2.7e-09 Score=103.05 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=80.7
Q ss_pred EEEcCccccCChHHHHHHHHHHhcCCEE---EEEEecCcc--hhccCCCCCCCCCHHHHHHHHHHccCcCceEeC---CC
Q 016998 259 VYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQI--VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIG---AP 330 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~l---iVgv~~D~~--v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~---~~ 330 (379)
|++-|+||.+|.||..+|++|++.++.+ .|.++-|.. +.+.+ +..|+++++||+.+++++. ++.|+.. +
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVvtFdphP~~l~~~-~~~~l~~~~eR~~ll~~lg-~~~v~~F~~~a- 78 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPD-FPGLLMTVESRVEMLSRYA-RTVVLDFFRIK- 78 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEEEESSCGGGGSTT-CCCBSSCHHHHHHHHTTTS-CEEEECHHHHT-
T ss_pred EEEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEEEecCCHHHhCCC-CCCCCCCHHHHHHHHHhCC-CEEEEEhHHhh-
Confidence 6788999999999999999999988652 355555632 22212 2258999999999999998 5555543 2
Q ss_pred CCchHHHHHH--cCCcEEEEcCCCCCC-------CCCC-CCceEEEEeee
Q 016998 331 WEVTKDMITT--FNICLVVHGTVSETN-------TPLT-VSLQFLYLPLI 370 (379)
Q Consensus 331 ~~~~~~~i~~--~~~d~vv~G~d~~~~-------~~l~-~~~evv~lp~~ 370 (379)
.....+|++. ++++++|.|.||... +.+. .+.+++.+|..
T Consensus 79 ~ls~~~Fi~~ill~~~~iVvG~Df~fG~~~~g~~~~L~~~G~~V~~v~~~ 128 (293)
T 1mrz_A 79 DLTPEGFVERYLSGVSAVVVGRDFRFGKNASGNASFLRKKGVEVYEIEDV 128 (293)
T ss_dssp TCCHHHHHHHHCTTCCEEEEETTCCBSGGGCBCHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHhcCCCEEEECCCCCCCCCCCCCHHHHHhCCCEEEEECCE
Confidence 1345788888 999999999998743 1222 68999999864
No 58
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=98.83 E-value=3.8e-09 Score=95.08 Aligned_cols=92 Identities=17% Similarity=0.118 Sum_probs=70.4
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCCC---
Q 016998 257 RVVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGAP--- 330 (379)
Q Consensus 257 ~~v~~~G~FDl~H~GHi~~L~~A~~~g--d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~~--- 330 (379)
+++++.|+||++|.||+.++++|++.+ |.+++..+.+.. .|+. .++++.++|..+++ +++..+.|.+...
T Consensus 3 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~-~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~ 78 (189)
T 2h29_A 3 KIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSP---LKKH-HDFIDVQHRLTMIQMIIDELGFGDICDDEIK 78 (189)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCT---TSCC-CSSCCCHHHHHHHHHHHHHHTCCEECCHHHH
T ss_pred eEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCcC-CCCCCHHHHHHHHHHHHcCCCCEEEehHHhc
Confidence 678999999999999999999999886 888887776642 3432 47899999999887 5788887777531
Q ss_pred ---CCchHHHHHHc---CCc---EEEEcCCC
Q 016998 331 ---WEVTKDMITTF---NIC---LVVHGTVS 352 (379)
Q Consensus 331 ---~~~~~~~i~~~---~~d---~vv~G~d~ 352 (379)
...+.+.++.+ .|+ +++.|.|.
T Consensus 79 ~~~~syt~dtl~~l~~~~p~~~~~~i~G~D~ 109 (189)
T 2h29_A 79 RGGQSYTYDTIKAFKEQHKDSELYFVIGTDQ 109 (189)
T ss_dssp HCSBCCHHHHHHHHHHHSTTEEEEEEEEHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCcEEEEEecch
Confidence 23566666543 466 89999763
No 59
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=98.79 E-value=4.5e-10 Score=107.68 Aligned_cols=109 Identities=17% Similarity=0.214 Sum_probs=82.3
Q ss_pred EEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCC---CCCCCHHHHHHHHhcCccccEEEeCCCc-ccc-H
Q 016998 68 VYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPY-AIT-E 142 (379)
Q Consensus 68 V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~Vv~~~p~-~~t-~ 142 (379)
|.|.|. +|.||+.||++|++.++.++|++..+|.-...+. +.+.+.+++.++++.+ +||.++.. ++ ++. +
T Consensus 28 VpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~-GvD~vf~p-~~~~myp~ 102 (283)
T 3ag6_A 28 IPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV-GADIVFHP-AVEDMYPG 102 (283)
T ss_dssp EEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH-TCSEEECC-CHHHHSCS
T ss_pred EECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CHHHCCCC
Confidence 459997 9999999999999999999999988876322222 4588999999999997 79999972 22 111 1
Q ss_pred HH--------HHH-HhhccCcc-------------EEEEcCCCCCCCCCchHHHHHHhCCe
Q 016998 143 QF--------MNR-LFNEHKID-------------YIIHGDDPCLLPDGTDAYALAKKVGR 181 (379)
Q Consensus 143 ef--------l~~-ll~~~~~d-------------~VV~GdD~~~g~~g~~~y~~lk~~g~ 181 (379)
+| +.+ +..+++|. .+|.|+|++||.++.+....+++.++
T Consensus 103 ~f~~~v~~~~l~~~L~G~~rp~hF~GV~TVV~KLf~iV~p~~~~FG~Kd~qql~~l~~m~~ 163 (283)
T 3ag6_A 103 ELGIDVKVGPLADVLEGAKRPGHFDGVVTVVNKLFNIVMPDYAYFGKKDAQQLAIVEQMVK 163 (283)
T ss_dssp SCSEEEEECGGGSSTHHHHSTTHHHHHHHHHHHHHHHHCCSEEEEEGGGHHHHHHHHHHHH
T ss_pred CceEEEeccccchhhccCCCCCeecchhhHhhhhcEEecCceEEECCCCccCHHHHHHHHH
Confidence 23 211 12237888 89999999999999988888887653
No 60
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=98.73 E-value=2.8e-08 Score=97.80 Aligned_cols=113 Identities=17% Similarity=0.129 Sum_probs=85.1
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCE---EEEEEecCcchhc----cCCCCCCCCCHHHHHHHHHHccCcCceEeC
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF---LLVGIYTDQIVSE----HRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~---liVgv~~D~~v~~----~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~ 328 (379)
...|++-|+||.+|.||..+|++|++.++. ..|.++-|..-.. .+. ..++++++||+..++++. ||.|++.
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~-~~~L~~~~eR~~ll~~~g-VD~v~v~ 92 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRA-PLGITTLAERFALAESFG-IDGVLVI 92 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCS-CCBSSCHHHHHHHHHHTT-CSEEEEE
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccC-CCCCCCHHHHHHHHHhcC-CCEEEEc
Confidence 357889999999999999999999988764 4788887763322 121 146999999999999986 9998874
Q ss_pred CC-----CCchHHHHHH-----cCCcEEEEcCCCCCC-----------CC-CCCCceEEEEeeec
Q 016998 329 AP-----WEVTKDMITT-----FNICLVVHGTVSETN-----------TP-LTVSLQFLYLPLIN 371 (379)
Q Consensus 329 ~~-----~~~~~~~i~~-----~~~d~vv~G~d~~~~-----------~~-l~~~~evv~lp~~~ 371 (379)
+. .....+|++. ++++.+|.|.|+-.. .. -. +++++.+|...
T Consensus 93 ~F~~~~a~ls~e~Fi~~il~~~l~~~~ivvG~Df~FG~~r~g~~~~L~~~~~~-g~~V~~v~~~~ 156 (338)
T 2x0k_A 93 DFTRELSGTSPEKYVEFLLEDTLHASHVVVGANFTFGENAAGTADSLRQICQS-RLTVDVIDLLD 156 (338)
T ss_dssp CTTTSSSSCCHHHHHHHCCCCCTCEEEEEEETTCEESGGGCEEHHHHHHHTTT-TSEEEEECCCE
T ss_pred cccHHHHhCCHHHHHHHHHHhhcCCCEEEEeecCCCCCCCCCCHHHHHHHhcC-CeEEEEECcEe
Confidence 32 1245678876 689999999998632 11 23 89999998743
No 61
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.60 E-value=3.6e-08 Score=96.01 Aligned_cols=60 Identities=17% Similarity=0.171 Sum_probs=50.3
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC 319 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~ 319 (379)
++++++.|+|||+|.||+.++++|++.+|.++|+|.++..-.+ | ++.++.+||+.+++..
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~d~~~~~v~~~~~~~~-~---~~~~~~~~R~~m~~~~ 66 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNSKKVIINIGSCFNTPN-I---KNPFSFEQRKQMIESD 66 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSEEEEEEEEEEESCCCC-S---SSCSCHHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhCCcEEEEECCCCCCcc-c---CCCCCHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998753211 2 4567999999888543
No 62
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.59 E-value=7.1e-08 Score=93.27 Aligned_cols=109 Identities=17% Similarity=0.252 Sum_probs=74.2
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc-cCc--CceEe--CCC
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-RYV--DEVII--GAP 330 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~-~~V--d~Vii--~~~ 330 (379)
.+++++.|+||++|.||+.++++|++.+|.++|+|.++..-.+ | ...++.++|+.+++.. +.. +++.+ ++.
T Consensus 7 ~~~~i~~G~FdP~H~GH~~li~~a~~~~d~v~v~v~~~~~p~~-~---~~~~~~~~R~~m~~~~~~~~~~~~~~~i~~~d 82 (341)
T 2qjo_A 7 YQYGIYIGRFQPFHLGHLRTLNLALEKAEQVIIILGSHRVAAD-T---RNPWRSPERMAMIEACLSPQILKRVHFLTVRD 82 (341)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHEEEEEEEEEEETCCCC-S---SSCSCHHHHHHHHHTTSCHHHHTTEEEEEEEC
T ss_pred eeEEEEEEEeCCCCHHHHHHHHHHHHhCCeEEEEECCcccCCC-C---CCCCCHHHHHHHHHHHhhhccCCeEEEEECCC
Confidence 4689999999999999999999999999999999998853222 2 2347999999998754 443 33333 332
Q ss_pred C-------Cc-hHHHHHHcC---CcEEEEcCCCCCCC---CCCCCceEEEEe
Q 016998 331 W-------EV-TKDMITTFN---ICLVVHGTVSETNT---PLTVSLQFLYLP 368 (379)
Q Consensus 331 ~-------~~-~~~~i~~~~---~d~vv~G~d~~~~~---~l~~~~evv~lp 368 (379)
. .. ..++++.+. .++++-|.+.+... ....+++++.+|
T Consensus 83 ~~~~~~~w~~~~~~l~~~l~r~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 134 (341)
T 2qjo_A 83 WLYSDNLWLAAVQQQVLKITGGSNSVVVLGHRKDASSYYLNLFPQWDYLETG 134 (341)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCSCEEEEECCCSGGGGGGGSCTTSEEEECC
T ss_pred CcCChHHHHHHHHHHhHHhcCCCceEEEEcCCCCCChHHHHhccccceeecc
Confidence 1 11 123344433 67888887764332 122378888887
No 63
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=98.59 E-value=8.8e-08 Score=84.62 Aligned_cols=109 Identities=19% Similarity=0.188 Sum_probs=69.2
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcC-ceEe--CCCC--
Q 016998 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVD-EVII--GAPW-- 331 (379)
Q Consensus 258 ~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd-~Vii--~~~~-- 331 (379)
++++.|+||++|.||+.++++|++.+|.++|++.+... ..|. .+.++.+||..+++ +++..+ .+.+ .+.+
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~m~~~~~~~~~~~v~v~~~d~l~~ 77 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEVDEIIIGIGSAQK--SHTL--ENPFTAGERILMITQSLKDYDLTYYPIPIKDIEF 77 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSS--SCCSCHHHHHHHHHHHHTTSSCEEEEEECCCCSC
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhCCeEEEEEcCCCC--CCCC--CCCCCHHHHHHHHHHHHhcCCCceEEEeeCCccc
Confidence 58899999999999999999999999999999943322 2232 24569999999886 567766 5543 2211
Q ss_pred -CchHHHHHHc--CCcEEEEcCCCCCCCCCCCCceEEEEeee
Q 016998 332 -EVTKDMITTF--NICLVVHGTVSETNTPLTVSLQFLYLPLI 370 (379)
Q Consensus 332 -~~~~~~i~~~--~~d~vv~G~d~~~~~~l~~~~evv~lp~~ 370 (379)
....+.++++ ..++++.|.++...-....+++++..|..
T Consensus 78 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 119 (168)
T 1f9a_A 78 NSIWVSYVESLTPPFDIVYSGNPLVRVLFEERGYEVKRPEMF 119 (168)
T ss_dssp GGGHHHHHHHHSCCCSEEECCCHHHHHHHHHTTCEEECCCCC
T ss_pred HHHHHHHHHHhccCCCEEEECcHHHHHhhhhcCcEEEeCCcc
Confidence 2233444443 45677666432100011235666666543
No 64
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=98.58 E-value=5.8e-09 Score=100.72 Aligned_cols=112 Identities=16% Similarity=0.183 Sum_probs=79.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHH-cCCeEEEEEccchhhhccCC---CCCCCHHHHHHHHhcCccccEEEeCCCc-ccc
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKG---PPVLSMEERLALVSGLKWVDEVIANAPY-AIT 141 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~-~~d~LiVgV~sd~~i~~~K~---~pi~t~eER~~~l~~~~~VD~Vv~~~p~-~~t 141 (379)
+|.+..++..+|.||+.||++|++ .++.++|.+..+|.-...+. +.+.+.+++.++++.. +||.++.. ++ ++.
T Consensus 34 ~vg~VpTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~-GVD~vf~p-~~~~my 111 (301)
T 3cov_A 34 RVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE-GVEIAFTP-TTAAMY 111 (301)
T ss_dssp EEEEEEECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT-TCCEEECC-CHHHHC
T ss_pred cEEEEecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC-CCCEEEeC-CHHHCC
Confidence 455555555699999999999999 99999999988876332222 3588999999999997 79999972 22 111
Q ss_pred -HHHHHHHhhccCccEEEEcC-----------------------CCCCCCCCchHHHHHHhCCe
Q 016998 142 -EQFMNRLFNEHKIDYIIHGD-----------------------DPCLLPDGTDAYALAKKVGR 181 (379)
Q Consensus 142 -~efl~~ll~~~~~d~VV~Gd-----------------------D~~~g~~g~~~y~~lk~~g~ 181 (379)
++|...+... ++..+++|. |+.||.++.+....+++.++
T Consensus 112 P~~f~~~v~~~-~~~~vl~G~~RPghF~GV~TVV~KLfniv~P~~a~FG~Kd~qql~~lr~mv~ 174 (301)
T 3cov_A 112 PDGLRTTVQPG-PLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVA 174 (301)
T ss_dssp TTCSCSEEECC-GGGGSGGGSSCTTHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHH
T ss_pred CCCceEEEecC-CcceeeecCCCCChhhhhhHHHHHHhhccCCCeEEECCCcccCHHHHHHHHH
Confidence 1232211111 345667777 99999999998888887653
No 65
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.58 E-value=6.3e-08 Score=94.02 Aligned_cols=97 Identities=20% Similarity=0.207 Sum_probs=71.8
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEE---EEEEecCcchhcc--C---CCCCCCCCHHHHHHHHHHccCcCceEe
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFL---LVGIYTDQIVSEH--R---GSYHPIMHLHERSLSVLACRYVDEVII 327 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~l---iVgv~~D~~v~~~--K---g~~~pi~~~~eR~~~v~~~~~Vd~Vii 327 (379)
...|++-|.||-+|.||..+|++|++.++.+ .|.++-|..-.+. + ....++++++||...++++. ||.+++
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG-VD~v~~ 98 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELYL 98 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEEE
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC-CCEEEE
Confidence 4679999999999999999999999887643 5556655422110 0 11247999999999999998 999988
Q ss_pred CCCC-----CchHHH----HHHcCCcEEEEcCCCC
Q 016998 328 GAPW-----EVTKDM----ITTFNICLVVHGTVSE 353 (379)
Q Consensus 328 ~~~~-----~~~~~~----i~~~~~d~vv~G~d~~ 353 (379)
.+.. ....+| +++++++.+|.|.||-
T Consensus 99 ~~F~~~~a~ls~e~Fv~~ll~~l~~~~ivvG~Dfr 133 (308)
T 3op1_A 99 LDFSSQFASLTAQEFFATYIKAMNAKIIVAGFDYT 133 (308)
T ss_dssp ECCCHHHHTCCHHHHHHHHHHHHTEEEEEEETTCC
T ss_pred ecCCHHHHcCCHHHHHHHHHHHcCCCEEEECcCCC
Confidence 4421 123444 4578999999999975
No 66
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=98.52 E-value=1.2e-07 Score=84.84 Aligned_cols=109 Identities=17% Similarity=0.118 Sum_probs=72.2
Q ss_pred eEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHH-ccCc----CceEeCC--
Q 016998 257 RVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYV----DEVIIGA-- 329 (379)
Q Consensus 257 ~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~V----d~Vii~~-- 329 (379)
+++++.|+||++|.||+.++++|++.+|.++|++.++.. ..|. .+.++.+||+.+++. ++.. |.+.+..
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~d~v~v~v~~~~~--p~~~--~~~~~~~~R~~~~~~a~~~~~~~~~~v~v~~~d 79 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEVDELIICIGSAQL--SHSI--RDPFTAGERVMMLTKALSENGIPASRYYIIPVQ 79 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTCSEEEEEECSTTC--CSSS--SSCSCHHHHHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhCCeeEEEECCCCC--CcCC--CCCCCHHHHHHHHHHHHhhCCCCCCcEEEEecC
Confidence 578999999999999999999999999999999955432 2232 357799999988865 4544 4555422
Q ss_pred CC---CchHHHHHHc--CCcEEEEcCCCCCCCCCCCCceEEEEee
Q 016998 330 PW---EVTKDMITTF--NICLVVHGTVSETNTPLTVSLQFLYLPL 369 (379)
Q Consensus 330 ~~---~~~~~~i~~~--~~d~vv~G~d~~~~~~l~~~~evv~lp~ 369 (379)
.. ....++++++ ..++++-|.++...-....+++++.+|.
T Consensus 80 ~~~~~~~w~~~~~~l~~~~~~~v~gr~~~~~~~~~~~i~~~~~~~ 124 (181)
T 1ej2_A 80 DIECNALWVGHIKMLTPPFDRVYSGNPLVQRLFSEDGYEVTAPPL 124 (181)
T ss_dssp CCSCHHHHHHHHHHHSCCCSEEECCCHHHHHHHHHTTCCEECCCC
T ss_pred ccCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHhCCeEEEecCC
Confidence 11 1233444443 6788888865311101124567776665
No 67
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.51 E-value=1.6e-07 Score=89.91 Aligned_cols=71 Identities=15% Similarity=0.238 Sum_probs=56.9
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEE--ecCcchhccCCCCCCCCCHHHHHHHHHHccCcCceEeC
Q 016998 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGI--YTDQIVSEHRGSYHPIMHLHERSLSVLACRYVDEVIIG 328 (379)
Q Consensus 255 ~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv--~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~ 328 (379)
+++++++ |+||-+|.||..+|++|++.+|.+||++ +++++........+ ..++++|+..++++. ||.|+..
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~ad~vVVSffvnP~qf~~~ed~~~y-p~tle~d~~lL~~~G-VD~vf~p 93 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAENDVVVVSIFVNPTQFGPNEDYERY-PRDFERDRKLLEKEN-VDCIFHP 93 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHHSSEEEEEECCCGGGCCTTSCGGGS-CCCHHHHHHHHHTTT-CSEEECC
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHhCCEEEEEEeCChHHhcCCcccccC-CCCHHHHHHHHHHCC-CCEEEeC
Confidence 4567777 8999999999999999999999999999 55554433211224 458999999999998 9999874
No 68
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=98.47 E-value=1.2e-07 Score=85.10 Aligned_cols=108 Identities=14% Similarity=0.091 Sum_probs=69.0
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHH-ccCcC--ceEeCC---
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLA-CRYVD--EVIIGA--- 329 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~-~~~Vd--~Vii~~--- 329 (379)
+++++.+|+|||+|.||+.+++ |.+..|.|++++..+ +..| ++..+.++|+.+++. ++..+ .+.+.+
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~d~v~~~p~~~---~~~k---~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHFDLVLLEPSIA---HAWG---KNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTSSEEEEEECC-------------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHCCEEEEEECCC---CCCC---CCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4789999999999999999998 777779999999876 2223 478999999988854 55432 444321
Q ss_pred -----C-CCchHHHHHHc---CCc---EEEEcCC-------CCCCCCCCCCceEEEEeee
Q 016998 330 -----P-WEVTKDMITTF---NIC---LVVHGTV-------SETNTPLTVSLQFLYLPLI 370 (379)
Q Consensus 330 -----~-~~~~~~~i~~~---~~d---~vv~G~d-------~~~~~~l~~~~evv~lp~~ 370 (379)
. ...|.+.++.+ .|+ +++.|.| |..-+.+-..+.++.+|++
T Consensus 75 ~l~~~~~~syT~dTl~~l~~~~p~~~~~~iiG~D~l~~l~~W~~~~~l~~~~~~vv~~r~ 134 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQEIYPTADITFVIGPDNFFKFAKFYKAEEITERWTVMACPEK 134 (177)
T ss_dssp HHC----CCCHHHHHHHHHHHSTTSEEEEEECHHHHHTGGGSTTHHHHHHHSEEEECCCS
T ss_pred hcccCCCCcchHHHHHHHHHHhcCCCeEEEEecchhhhcccchhHHHHHHhCCEEEEcCC
Confidence 1 23454555443 344 5788976 2222222234677777653
No 69
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=98.33 E-value=5.5e-07 Score=86.23 Aligned_cols=84 Identities=14% Similarity=0.218 Sum_probs=60.4
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCC-----EEEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeC
Q 016998 255 NARVVYIDGAFDLFHAGHVEILKKARQLGD-----FLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIG 328 (379)
Q Consensus 255 ~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd-----~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~ 328 (379)
..+++++.|+||++|.||+.++++|++.++ .++|++..-...+..| .++.+.++|+.+++ ++...+.+.+.
T Consensus 7 ~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K---~~l~s~~~R~~ml~~ai~~~~~~~v~ 83 (279)
T 1kqn_A 7 TEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK---KGLIPAYHRVIMAELATKNSKWVEVD 83 (279)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCC---TTCCCHHHHHHHHHHHTTTCSSEEEC
T ss_pred CceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccc---cCCCCHHHHHHHHHHHhcCCCcEEEe
Confidence 357899999999999999999999997763 3666553322222333 36899999999886 56788888775
Q ss_pred C------CCCchHHHHHHc
Q 016998 329 A------PWEVTKDMITTF 341 (379)
Q Consensus 329 ~------~~~~~~~~i~~~ 341 (379)
+ .+..|.+.++.+
T Consensus 84 ~~E~~~~~~syTidtL~~l 102 (279)
T 1kqn_A 84 TWESLQKEWKETLKVLRHH 102 (279)
T ss_dssp CTGGGCSSCCCHHHHHHHH
T ss_pred ccccccCCCCcHHHHHHHH
Confidence 3 355666666554
No 70
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=98.27 E-value=1.2e-06 Score=82.52 Aligned_cols=84 Identities=14% Similarity=0.162 Sum_probs=58.9
Q ss_pred CeEEEEcCccccCChHHHHHHHHHHhcCCE----EEEEEecCcchhccCCCCCCCCCHHHHHHHHH-HccCcCceEeCC-
Q 016998 256 ARVVYIDGAFDLFHAGHVEILKKARQLGDF----LLVGIYTDQIVSEHRGSYHPIMHLHERSLSVL-ACRYVDEVIIGA- 329 (379)
Q Consensus 256 ~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~----liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~-~~~~Vd~Vii~~- 329 (379)
.+++++.|+||++|.||+.++++|++.++. .+||+.-.......+. .++++.++|+.+++ +++..+.+.+.+
T Consensus 6 ~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k--~~~~~~~~R~~m~~~ai~~~~~~~v~~~ 83 (252)
T 1nup_A 6 PVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGK--KDLAASHHRVAMARLALQTSDWIRVDPW 83 (252)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSS--SCCCCHHHHHHHHHHHGGGCSSEEECCH
T ss_pred ceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccC--CCCCCHHHHHHHHHHHhcCCCceEeehH
Confidence 468999999999999999999999987642 6765432222222221 36899999998885 677777776642
Q ss_pred -----CCCchHHHHHHc
Q 016998 330 -----PWEVTKDMITTF 341 (379)
Q Consensus 330 -----~~~~~~~~i~~~ 341 (379)
.+..|.+.++.+
T Consensus 84 E~~~~~~syTidtL~~l 100 (252)
T 1nup_A 84 ESEQAQWMETVKVLRHH 100 (252)
T ss_dssp HHHSSSCCCHHHHHHHH
T ss_pred HhcCCCCCCHHHHHHHH
Confidence 345666666555
No 71
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=98.25 E-value=6.8e-06 Score=81.06 Aligned_cols=133 Identities=16% Similarity=0.123 Sum_probs=83.2
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCc-cc---cEE-EeCCCccc
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAPYAI 140 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~V---D~V-v~~~p~~~ 140 (379)
++|++.|+||++|.||..+.++|.+..|.+++-..-. ..| +-..+.+.|+++++.+- .. +.+ +.-.|+++
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g----~~K-~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m 230 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILG----AKK-PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 230 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCS----CCC-TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCC----CCC-CCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHh
Confidence 3578899999999999999999999988766654422 223 45689999999998631 11 112 22233333
Q ss_pred c-----HHHHHHHh-hccCccEEEEcCCCC--CCCCCchHHHH-HHhC---C-eEEEecc--------------------
Q 016998 141 T-----EQFMNRLF-NEHKIDYIIHGDDPC--LLPDGTDAYAL-AKKV---G-RYKQIKR-------------------- 187 (379)
Q Consensus 141 t-----~efl~~ll-~~~~~d~VV~GdD~~--~g~~g~~~y~~-lk~~---g-~~~~v~r-------------------- 187 (379)
. +..+..++ +.+++.++++|.|.. ...-++..++. ++.. | ++..+++
T Consensus 231 ~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~i~~~~~~l~i~~v~~~~~~Y~~~~~~~~~~~~~p~~~ 310 (349)
T 1v47_A 231 RYAGPKEAVFHALVRKNFGATHFLVGRDHAGVGDFYDPYAAHRIFDRLPPLGIEIVKVGAVFHCPLCGGIASERTCPEGH 310 (349)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTTCSTTCSCTTHHHHGGGGSCCCSSEEEECCCEEEETTTTEEEETTTSCGGG
T ss_pred hcCCcHHHHHHHHHHHcCCCcEEEECcCCCCcccccCcccHHHHHHhhhhcCceEEeccccEEcccCCceEEccccCccC
Confidence 1 23445544 457999999999974 22223333333 3332 1 2222111
Q ss_pred ---CCCCCHHHHHHHHHhc
Q 016998 188 ---TEGVSSTDIVGRILSS 203 (379)
Q Consensus 188 ---~~~VSST~Ir~rI~~~ 203 (379)
.-.||||+||+++.++
T Consensus 311 ~~~~~~ISgT~iR~~L~~G 329 (349)
T 1v47_A 311 REKRTAISMTKVRALLREG 329 (349)
T ss_dssp GGGCEECCHHHHHHHHHTT
T ss_pred CCcccccCHHHHHHHHHCc
Confidence 0148999999999876
No 72
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=98.22 E-value=1.1e-05 Score=80.78 Aligned_cols=132 Identities=16% Similarity=0.091 Sum_probs=82.1
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcC--CeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCc-cc---cEE-EeCCCcc
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKALG--DELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK-WV---DEV-IANAPYA 139 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~--d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~-~V---D~V-v~~~p~~ 139 (379)
+|++.|+||++|.||..++++|.+.. |.|++-..-. ..| +--.+.+.|+++++.+- .. +.+ +...|++
T Consensus 194 ~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g----~~K-~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p~~ 268 (396)
T 1jhd_A 194 KVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLG----KLK-KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYGFD 268 (396)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC----CCC-TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEECC
T ss_pred eEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCC----CCC-CCCCCHHHHHHHHHHHHHhcCCCcceEEEechHH
Confidence 57889999999999999999999987 7665544322 223 45688999999988631 11 111 1112232
Q ss_pred c-----cHHHHHHHh-hccCccEEEEcCCCC--CCCCCchHHH-HHHh------CC-eEEEecc----------------
Q 016998 140 I-----TEQFMNRLF-NEHKIDYIIHGDDPC--LLPDGTDAYA-LAKK------VG-RYKQIKR---------------- 187 (379)
Q Consensus 140 ~-----t~efl~~ll-~~~~~d~VV~GdD~~--~g~~g~~~y~-~lk~------~g-~~~~v~r---------------- 187 (379)
+ ++..+..++ +.+++.++++|.|.. ...-++..++ .++. .| +++.+++
T Consensus 269 m~~aGPreailhaiirkn~G~t~fIVGrDhag~~~~y~~~~aq~il~~~~~~~~l~i~iv~~~~~~Y~~~~~~~~~~~~~ 348 (396)
T 1jhd_A 269 MLYAGPREAVLHAYFRQNMGATHFIIGRDHAGVGDYYGAFDAQTIFDDEVPEGAMEIEIFRADHTAYSKKLNKIVMMRDV 348 (396)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTTTTCCTTCSCTTHHHHHHHHTSCTTSCSCEEEECCCEEEETTTTEEEEGGGC
T ss_pred hhcCCchHHHHHHHHHHcCCCcEEEECCCCCCccccCCcchHHHHHHhcccccccceeEEecccceecCCCCeEEEcccc
Confidence 2 133344444 457999999999984 2223333333 4443 22 3333222
Q ss_pred -------CCCCCHHHHHHHHHhc
Q 016998 188 -------TEGVSSTDIVGRILSS 203 (379)
Q Consensus 188 -------~~~VSST~Ir~rI~~~ 203 (379)
...||||+||+++.++
T Consensus 349 p~~~~~~~~~ISgT~IR~~L~~G 371 (396)
T 1jhd_A 349 PDHTKEDFVLLSGTKVREMLGQG 371 (396)
T ss_dssp TTCCGGGEECCCHHHHHHHHHTT
T ss_pred CcccCCCccccCHHHHHHHHHCC
Confidence 0249999999999877
No 73
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.20 E-value=6.5e-06 Score=81.40 Aligned_cols=114 Identities=15% Similarity=0.248 Sum_probs=79.7
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcc--hhccCCCCCCCCCHHHHHHHHHHccCcCceEeCCC--
Q 016998 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQI--VSEHRGSYHPIMHLHERSLSVLACRYVDEVIIGAP-- 330 (379)
Q Consensus 255 ~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~--v~~~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii~~~-- 330 (379)
++++|.+-|.||+||.||..+|++|++ .+ ++++|-+-.. +. +|. ..+++..+|..+++.+ .||.|+..+.
T Consensus 51 ~~~~v~~lG~FDg~H~GHq~lI~~a~~-~~-~~~~Vms~~~~~vq--rg~-~~l~~~~~R~~~~~~~-GvD~vielpF~~ 124 (357)
T 3gmi_A 51 KDKIVCDFTEYNPLHKGHKYALEKGKE-HG-IFISVLPGPLERSG--RGI-PYFLNRYIRAEMAIRA-GADIVVEGPPMG 124 (357)
T ss_dssp CCCEEEEECCCTTCCHHHHHHHHHHHT-SS-EEEEEECCTTSBCT--TSS-BCSSCHHHHHHHHHHH-TCSEEEECCCGG
T ss_pred CCCEEEEEEecCccCHHHHHHHHHHHH-cC-CeEEEEcCchHHhc--CCC-CcCCCHHHHHHHHHHC-CCCEEEEcCchh
Confidence 357899999999999999999999999 55 5555555333 33 343 5799999999999998 8999888643
Q ss_pred CCchHHHHH-------HcCCcEEEEcCCCCCC------CCCCCCceEEEEeeecceee
Q 016998 331 WEVTKDMIT-------TFNICLVVHGTVSETN------TPLTVSLQFLYLPLINYCIC 375 (379)
Q Consensus 331 ~~~~~~~i~-------~~~~d~vv~G~d~~~~------~~l~~~~evv~lp~~~~~~~ 375 (379)
...+++|++ +++++.+|.|. .+.. ..+..+..+..-||...|.-
T Consensus 125 ~~s~~~Fv~~~v~ll~~l~~~~iv~G~-~~~~~~~~~~~~i~~~~~~~~kp~~~~g~e 181 (357)
T 3gmi_A 125 IMGSGQYMRCLIKMFYSLGAEIIPRGY-IPEKTMEKVIDCINKGYHIQVKPYKIICIE 181 (357)
T ss_dssp GSCHHHHHHHHHHHHHHHTCCEEEEEE-CCCHHHHHHHHHHHTTCCEEEETTEEEETT
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEECC-CCchhHHHHHHHHhcccccccccchhccCc
Confidence 123455655 58999999998 2221 12334444545577665543
No 74
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=97.59 E-value=0.0001 Score=70.44 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=56.3
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhhc-cCC--CCCCCHHHHHHHHhcCccccEEEe
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIA-NKG--PPVLSMEERLALVSGLKWVDEVIA 134 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~~-~K~--~pi~t~eER~~~l~~~~~VD~Vv~ 134 (379)
++-+..+..++|.||+.||++|++.++.++|.+..+|.-.. ... +.+.+.+++.++++.. +||.|+.
T Consensus 23 ~ig~VPTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 23 RTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp SCEEEEECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred eEEEECCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 57888999999999999999999999999999988776322 222 5688999999999997 8998875
No 75
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=96.91 E-value=0.0021 Score=62.13 Aligned_cols=65 Identities=23% Similarity=0.283 Sum_probs=51.3
Q ss_pred eEEE--EecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhh-ccCC--CCCCCHHHHHHHHhcCccccEEEe
Q 016998 66 VRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (379)
Q Consensus 66 ~~V~--~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~Vv~ 134 (379)
++++ |.| .+|.||+.|+++|++.+|.++|.+.-+|.=. +... ...-++++..++++.. +||.|+.
T Consensus 44 ~IgfVPTMG---~LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-GvD~vF~ 113 (314)
T 3inn_A 44 KIGFVPTMG---YLHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA-QVDYLFA 113 (314)
T ss_dssp CEEEEEECS---SCCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT-TCSEEEC
T ss_pred eEEEEcCCC---ccCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC-CCCEEEC
Confidence 4566 778 5999999999999999999999988777521 2222 4567899999999986 8998875
No 76
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=96.79 E-value=0.0039 Score=59.42 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=52.0
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCC-CCCCCCCHHHHHHHHHHccCcCceEeC
Q 016998 258 VVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIG 328 (379)
Q Consensus 258 ~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg-~~~pi~~~~eR~~~v~~~~~Vd~Vii~ 328 (379)
.|.+-|. +|.||..++++|++.+|.++|.+..+..--.... ......++++|...++++. ||.|+..
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~p 88 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG-VDLLFAP 88 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEECC
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhCCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEeC
Confidence 4666777 9999999999999999999999998854321111 1134789999999999875 9988863
No 77
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=96.15 E-value=0.0046 Score=59.07 Aligned_cols=65 Identities=20% Similarity=0.177 Sum_probs=46.9
Q ss_pred eEEE--EecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhh-ccCC--CCCCCHHHHHHHHhcCccccEEEe
Q 016998 66 VRVY--MDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (379)
Q Consensus 66 ~~V~--~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~Vv~ 134 (379)
++++ |.|+ +|.||..|+++|++.+|.++|++.-+|.=. +... ...-++++=.++++.. +||.|+.
T Consensus 26 ~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~-gvd~vF~ 95 (287)
T 3q12_A 26 RIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH-GADLVFA 95 (287)
T ss_dssp CEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH-TCSEEEC
T ss_pred eEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 4566 8896 999999999999999999999987665310 0000 1233567777778775 7897775
No 78
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=96.04 E-value=0.023 Score=54.26 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=51.0
Q ss_pred CeEEE--EcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCC-CCCCCCCHHHHHHHHHHccCcCceEeC
Q 016998 256 ARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG-SYHPIMHLHERSLSVLACRYVDEVIIG 328 (379)
Q Consensus 256 ~~~v~--~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg-~~~pi~~~~eR~~~v~~~~~Vd~Vii~ 328 (379)
+++++ +-|. +|.||..++++|++.+|.++|.+..+..--.... ......+++++...++++. ||.|+..
T Consensus 23 ~~I~fVpTmG~---lH~GH~~LI~~a~~~a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G-vD~vf~p 94 (283)
T 3ag6_A 23 TTIGFIPTMGA---LHDGHLTMVRESVSTNDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG-ADIVFHP 94 (283)
T ss_dssp CCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT-CSEEECC
T ss_pred CcEEEEECCcc---ccHHHHHHHHHHHHhCCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeC
Confidence 45555 6775 9999999999999999999999987743211111 0123678999999888875 9988773
No 79
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.67 E-value=0.012 Score=56.18 Aligned_cols=37 Identities=24% Similarity=0.579 Sum_probs=32.1
Q ss_pred CCeEEE--EcCccccCChHHHHHHHHHHhcCCEEEEEEecCc
Q 016998 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQ 294 (379)
Q Consensus 255 ~~~~v~--~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~ 294 (379)
++++++ +-|. +|.||++++++|++.+|.+||+|.-+.
T Consensus 24 g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~d~vVVSIFVNP 62 (287)
T 3q12_A 24 GKRIALVPTMGN---LHEGHMTLVDEAKTRADVVVVTIFVNP 62 (287)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTSSEEEEEECCCG
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHHhCCEEEEEeccCc
Confidence 457777 6686 999999999999999999999998653
No 80
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=95.20 E-value=0.045 Score=52.69 Aligned_cols=65 Identities=15% Similarity=0.247 Sum_probs=47.5
Q ss_pred CccccCChHHHHHHHHHHh-cCCEEEEEEecCcchhccCCC-CCCCCCHHHHHHHHHHccCcCceEeC
Q 016998 263 GAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGS-YHPIMHLHERSLSVLACRYVDEVIIG 328 (379)
Q Consensus 263 G~FDl~H~GHi~~L~~A~~-~gd~liVgv~~D~~v~~~Kg~-~~pi~~~~eR~~~v~~~~~Vd~Vii~ 328 (379)
.++.-+|.||..++++|++ .+|.++|.+..+..---.... .....+++++...++++. ||.|+..
T Consensus 39 pTmG~LH~GH~sLI~~A~~~~a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G-VD~vf~p 105 (301)
T 3cov_A 39 PTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG-VEIAFTP 105 (301)
T ss_dssp EECSCCCHHHHHHHHHHHTSTTEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT-CCEEECC
T ss_pred ecCCcccHHHHHHHHHHHHhcCCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEeC
Confidence 4444499999999999999 999999999877532111110 013668999999888875 8988773
No 81
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=94.74 E-value=0.057 Score=51.47 Aligned_cols=61 Identities=21% Similarity=0.281 Sum_probs=44.7
Q ss_pred EEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhh-hccCC--CCCCCHHHHHHHHhcCccccEEEe
Q 016998 69 YMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEI-IANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (379)
Q Consensus 69 ~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i-~~~K~--~pi~t~eER~~~l~~~~~VD~Vv~ 134 (379)
=|.|. +|-||+.|+++|++ +|.++|.+.-+|.= .+... ...-++++=.++++.. +||.|+.
T Consensus 31 PTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 31 PTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp EECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 36675 99999999999999 99999988766641 11111 2344677778888876 8998775
No 82
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=94.31 E-value=0.56 Score=46.70 Aligned_cols=93 Identities=17% Similarity=0.188 Sum_probs=56.4
Q ss_pred EEEEecccCcCCHHHHHHH-HHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCcc---ccEEEe-CCCccc-
Q 016998 67 RVYMDGCFDLMHYGHANAL-RQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW---VDEVIA-NAPYAI- 140 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL-~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~---VD~Vv~-~~p~~~- 140 (379)
+|++..+.+++|.||..++ +.|.+.++.|++ ++ .+-..| +-=.+.+-|++..+.+-- -+.++. ..|+.+
T Consensus 189 ~VvafqtrNP~HraH~e~~~r~a~e~~~~lll--hP--lvG~tK-~~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~mr 263 (395)
T 1r6x_A 189 RVVAFQTRNPMHRAHRELTVRAAREANAKVLI--HP--VVGLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMR 263 (395)
T ss_dssp CEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCSBCC-TTCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBCC
T ss_pred cEEEeccCCCcchhhHHHHHHHHHHcCCcEEE--EE--CCCCCC-CCCCCHHHHHHHHHHHHHhCCCccEEEEecchhhh
Confidence 5888999999999996555 455555664443 33 122222 334788999988876421 122332 223322
Q ss_pred ----cHHHHHHHh-hccCccEEEEcCCCC
Q 016998 141 ----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (379)
Q Consensus 141 ----t~efl~~ll-~~~~~d~VV~GdD~~ 164 (379)
.+..+..++ +.++|.++++|-|..
T Consensus 264 yAGPrEai~HAiiRkN~GcthfIVGRDhA 292 (395)
T 1r6x_A 264 MSGDREAVWHAIIRKNYGASHFIVGRDHA 292 (395)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hcCcHHHHHHHHHHHHcCCceEEECCCCC
Confidence 133344544 458999999999974
No 83
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=94.19 E-value=0.15 Score=49.23 Aligned_cols=68 Identities=22% Similarity=0.344 Sum_probs=46.9
Q ss_pred CCeEEE--EcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhc--cCCCCCCCCCHHHHHHHHHHccCcCceEe
Q 016998 255 NARVVY--IDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSE--HRGSYHPIMHLHERSLSVLACRYVDEVII 327 (379)
Q Consensus 255 ~~~~v~--~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~--~Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii 327 (379)
++++++ +-|. +|.||++++++|++.+|.+||.|.-+..=-. .--..||- ++++.+..+++. .||.|+.
T Consensus 42 g~~IgfVPTMG~---LH~GHlsLi~~A~~~~d~vVVSIFVNP~QF~~~EDl~~YPR-tle~D~~ll~~~-GvD~vF~ 113 (314)
T 3inn_A 42 GKKIGFVPTMGY---LHKGHLELVRRARVENDVTLVSIFVNPLQFGANEDLGRYPR-DLERDAGLLHDA-QVDYLFA 113 (314)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHHHCSEEEEEECCCGGGSCTTSSTTTCCC-CHHHHHHHHHHT-TCSEEEC
T ss_pred CCeEEEEcCCCc---cCHHHHHHHHHHHHhCCEEEEEECCChhhcCCCccccccCC-CHHHHHHHHHhC-CCCEEEC
Confidence 467777 6674 9999999999999999999999986642110 00011343 677777766665 5786654
No 84
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=94.08 E-value=0.76 Score=47.21 Aligned_cols=93 Identities=18% Similarity=0.186 Sum_probs=57.7
Q ss_pred EEEEecccCcCCHHHHHHH-HHHHHcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCcc---ccEEEe-CCCcccc
Q 016998 67 RVYMDGCFDLMHYGHANAL-RQAKALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW---VDEVIA-NAPYAIT 141 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL-~qA~~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~---VD~Vv~-~~p~~~t 141 (379)
+|+...+.+++|.||..++ +.|.+.++.|++-..- -..| +-=.+.+-|++..+.+-- -+.++. -.|+.+-
T Consensus 190 ~v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl~----g~~k-~~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~m~ 264 (511)
T 1g8f_A 190 RVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVV----GLTK-PGDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAMR 264 (511)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEBC----SBCS-TTCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBCC
T ss_pred cEEEEecCCCCchHHHHHHHHHHHHcCCcEEEEECC----CCCC-CCCCCHHHHHHHHHHHHHhCCcccEEEEecchhhh
Confidence 5888999999999995555 5566657755553332 1122 334788999988876421 122222 2344321
Q ss_pred -----HHHHHHHh-hccCccEEEEcCCCC
Q 016998 142 -----EQFMNRLF-NEHKIDYIIHGDDPC 164 (379)
Q Consensus 142 -----~efl~~ll-~~~~~d~VV~GdD~~ 164 (379)
+..+..++ +.++|.++++|-|..
T Consensus 265 yaGprea~~hai~r~n~G~th~IvGrdhA 293 (511)
T 1g8f_A 265 MSGDREAVWHAIIRKNYGASHFIVGRDHA 293 (511)
T ss_dssp CCHHHHHHHHHHHHHHTTCSEEECCTTTT
T ss_pred ccCcHHHHHHHHHHHhCCCceEEeCCCCC
Confidence 33344544 459999999999974
No 85
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=94.03 E-value=0.086 Score=49.64 Aligned_cols=67 Identities=15% Similarity=0.289 Sum_probs=45.9
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHcCCeEEEEEccchhhh-ccCC--CCCCCHHHHHHHHhcCccccEEEe
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEII-ANKG--PPVLSMEERLALVSGLKWVDEVIA 134 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~~d~LiVgV~sd~~i~-~~K~--~pi~t~eER~~~l~~~~~VD~Vv~ 134 (379)
++-..-+--.+|-||+.|+++|++.+|.++|.+.-+|.=. +... ...-++++=.++++.. +||.|+.
T Consensus 25 ~ig~VPTMGaLH~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF~ 94 (264)
T 3n8h_A 25 KIGFVPTMGALHNGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL-DVDVLFN 94 (264)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT-TCSEEEC
T ss_pred cEEEECCCcchhHHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC-CCCEEEC
Confidence 3444455558999999999999999999998887665310 0000 1223567777777775 7887775
No 86
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=94.02 E-value=0.32 Score=47.63 Aligned_cols=88 Identities=14% Similarity=0.048 Sum_probs=58.3
Q ss_pred EEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc-c-CcCc--eEeC-CC---
Q 016998 259 VYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-R-YVDE--VIIG-AP--- 330 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~-~-~Vd~--Vii~-~~--- 330 (379)
|+--|+|||+|.||..+.++|.+..|.|++--.-. ..| .--.+.+-|+++++.+ + |.+. |++. .|
T Consensus 158 VvafqTrNPiHrgH~~l~~~ale~~d~vll~P~~g----~~K---~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~~p~~m 230 (349)
T 1v47_A 158 VVAFQTRNAPHRAHEYLIRLGLELADGVLVHPILG----AKK---PDDFPTEVIVEAYQALIRDFLPQERVAFFGLATPM 230 (349)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHSSEEEEEEBCS----CCC---TTSCCHHHHHHHHHHHHHHHSCGGGEEECCBCSCC
T ss_pred EEEeecCCCCchHHHHHHHHHHHhCCcEEEEECCC----CCC---CCCCCHHHHHHHHHHHHhhcCCCcceEEEechHHh
Confidence 44489999999999999999999899776644322 223 2357999999888766 3 3243 4331 11
Q ss_pred --CCchHH-----HHHHcCCcEEEEcCCCC
Q 016998 331 --WEVTKD-----MITTFNICLVVHGTVSE 353 (379)
Q Consensus 331 --~~~~~~-----~i~~~~~d~vv~G~d~~ 353 (379)
.+.+.- +-+.+++..++-|.|..
T Consensus 231 ~~aGPreailhaiirkn~G~t~fIVGrDha 260 (349)
T 1v47_A 231 RYAGPKEAVFHALVRKNFGATHFLVGRDHA 260 (349)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred hcCCcHHHHHHHHHHHcCCCcEEEECcCCC
Confidence 122222 22446899999998754
No 87
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=94.02 E-value=0.27 Score=49.00 Aligned_cols=89 Identities=12% Similarity=0.070 Sum_probs=57.1
Q ss_pred EEEEcCccccCChHHHHHHHHHHhcC--CEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc-c-CcCc--eEe--C-
Q 016998 258 VVYIDGAFDLFHAGHVEILKKARQLG--DFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC-R-YVDE--VII--G- 328 (379)
Q Consensus 258 ~v~~~G~FDl~H~GHi~~L~~A~~~g--d~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~-~-~Vd~--Vii--~- 328 (379)
.|+-.|+||++|.||..+.+.|.+.. |.|++--.-. ..| .--.+.+.|+++++.+ + |.+. |++ .
T Consensus 194 ~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g----~~K---~~di~~~~R~~~~~~~~~~~~p~~~v~l~~~p 266 (396)
T 1jhd_A 194 KVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLG----KLK---KGDIPAPVRDAAIRTMAEVYFPPNTVMVTGYG 266 (396)
T ss_dssp SEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEEC----CCC---TTCCCHHHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred eEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCC----CCC---CCCCCHHHHHHHHHHHHHhcCCCcceEEEech
Confidence 35559999999999999999999876 7665443322 223 2357889999888765 3 3233 332 1
Q ss_pred CC---CCchHH-----HHHHcCCcEEEEcCCCC
Q 016998 329 AP---WEVTKD-----MITTFNICLVVHGTVSE 353 (379)
Q Consensus 329 ~~---~~~~~~-----~i~~~~~d~vv~G~d~~ 353 (379)
.+ .+.+.. +-+.+++..++-|.|..
T Consensus 267 ~~m~~aGPreailhaiirkn~G~t~fIVGrDha 299 (396)
T 1jhd_A 267 FDMLYAGPREAVLHAYFRQNMGATHFIIGRDHA 299 (396)
T ss_dssp CCCCCCTHHHHHHHHHHHHHTTCSEEEECTTTT
T ss_pred HHhhcCCchHHHHHHHHHHcCCCcEEEECCCCC
Confidence 11 222222 22446889999998754
No 88
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=92.96 E-value=0.4 Score=49.62 Aligned_cols=92 Identities=20% Similarity=0.205 Sum_probs=58.5
Q ss_pred EEEEecccCcCCHHHHHHHHHHHH-cCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCc----cccEEEe-CCCcc-
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKA-LGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK----WVDEVIA-NAPYA- 139 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~-~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~----~VD~Vv~-~~p~~- 139 (379)
+|+..=++.++|.||..++++|.. .++.|+|-+.- -..| +-=.+.+-|++-++.+- --+.++. ..|..
T Consensus 165 ~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~----g~~k-~~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~m 239 (546)
T 2gks_A 165 KIVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVV----GLTK-PGDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLAM 239 (546)
T ss_dssp CEEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBC----SBCC-TTSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCBC
T ss_pred cEEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCc----CCCC-CCCCCHHHHHHHHHHHHHhcCCCCcEEEeecCchh
Confidence 588899999999999999999996 67766553221 1122 23468899998887641 1122222 22322
Q ss_pred -cc---HHHHHHHh-hccCccEEEEcCCC
Q 016998 140 -IT---EQFMNRLF-NEHKIDYIIHGDDP 163 (379)
Q Consensus 140 -~t---~efl~~ll-~~~~~d~VV~GdD~ 163 (379)
+. +.-...++ +.++|.++++|-|.
T Consensus 240 ~~agprea~~ha~ir~n~G~th~ivgrdh 268 (546)
T 2gks_A 240 RMAGPREALWHGIIRRNYGATHFIVGRDH 268 (546)
T ss_dssp CCCTHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred hccCchHHHHHHHHHHhCCCCeEEECCCC
Confidence 11 23334444 56899999999776
No 89
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=92.10 E-value=0.1 Score=49.13 Aligned_cols=38 Identities=24% Similarity=0.655 Sum_probs=30.8
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecC
Q 016998 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTD 293 (379)
Q Consensus 255 ~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D 293 (379)
++++.+++ |---+|.||++++++|++.+|.+||.|.-+
T Consensus 23 g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~d~vVVSIFVN 60 (264)
T 3n8h_A 23 QQKIGFVP-TMGALHNGHISLIKKAKSENDVVIVSIFVN 60 (264)
T ss_dssp TSCEEEEE-ECSSCCHHHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCcEEEEC-CCcchhHHHHHHHHHHHHhCCEEEEEEccC
Confidence 45666554 333699999999999999999999999865
No 90
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=92.00 E-value=0.28 Score=46.71 Aligned_cols=66 Identities=26% Similarity=0.373 Sum_probs=41.5
Q ss_pred CCeEEEE--cCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhccCC---CCCCCCCHHHHHHHHHHccCcCceEe
Q 016998 255 NARVVYI--DGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHRG---SYHPIMHLHERSLSVLACRYVDEVII 327 (379)
Q Consensus 255 ~~~~v~~--~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~Kg---~~~pi~~~~eR~~~v~~~~~Vd~Vii 327 (379)
++++.++ =|. +|.||++++++|++ +|.+||.|.-+..=-. .+ ..||- ++++=+..+++. .||-|+.
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~d~VVVSIFVNP~QF~-~~EDl~~YPR-tle~D~~ll~~~-gvD~vF~ 94 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-QDKVIVSIFVNPMQFG-PNEDFSSYPR-DLERDIKMCQDN-GVDMVFI 94 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-SSEEEEEECCCGGGCC-TTSCTTTSCC-CHHHHHHHHHHT-TCSEEEC
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-CCEEEEEeccCccccC-CchhhhcCCC-CHHHHHHHHHHC-CCCEEEC
Confidence 3456654 364 99999999999999 9999999986532100 00 01444 455444444444 5775554
No 91
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=90.87 E-value=0.47 Score=45.13 Aligned_cols=71 Identities=18% Similarity=0.268 Sum_probs=49.8
Q ss_pred CCeEEEEcCccccCChHHHHHHHHHHhcCCEEEEEEecCcchhcc-CCCCCCCCCHHHHHHHHHHccCcCceEe
Q 016998 255 NARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEH-RGSYHPIMHLHERSLSVLACRYVDEVII 327 (379)
Q Consensus 255 ~~~~v~~~G~FDl~H~GHi~~L~~A~~~gd~liVgv~~D~~v~~~-Kg~~~pi~~~~eR~~~v~~~~~Vd~Vii 327 (379)
+++++++ .+..-+|.||..++++|++.+|.++|.+..+..--.. ........+++++...++++ .||.|+.
T Consensus 21 g~~ig~V-PTMG~LH~GH~sLi~~A~~~~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF~ 92 (283)
T 3uk2_A 21 QNRTAFV-PTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLFA 92 (283)
T ss_dssp CSSCEEE-EECSSCCHHHHHHHHHHHTTCSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEEC
T ss_pred CCeEEEE-CCCCcccHHHHHHHHHHHHhCCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEEe
Confidence 3444444 5788899999999999999999999999876542110 01013456888888877765 5776655
No 92
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=90.35 E-value=0.89 Score=47.26 Aligned_cols=92 Identities=18% Similarity=0.142 Sum_probs=56.6
Q ss_pred EEEEecccCcCCHHHHHHHHHHHHc-CCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCc---cccEEEe-CCCcc--
Q 016998 67 RVYMDGCFDLMHYGHANALRQAKAL-GDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYA-- 139 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~~~-~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~Vv~-~~p~~-- 139 (379)
+|++.=+++++|.||..++++|... ++.|+|-+. +-..| +-=.+.+-|++-++.+- --+.++. ..|..
T Consensus 192 ~v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl----~g~~k-~~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m~ 266 (573)
T 1m8p_A 192 RVVAFQTRNPMHRAHRELTVRAARSRQANVLIHPV----VGLTK-PGDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAMR 266 (573)
T ss_dssp SEEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CCCCC-TTCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCCC
T ss_pred eEEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeC----CCCCC-CCCCCHHHHHHHHHHHHHhCCCCcEEEEecCchhh
Confidence 4778999999999999999998865 775555321 11112 23357788888877641 1122332 12322
Q ss_pred cc---HHHHHHHh-hccCccEEEEcCCC
Q 016998 140 IT---EQFMNRLF-NEHKIDYIIHGDDP 163 (379)
Q Consensus 140 ~t---~efl~~ll-~~~~~d~VV~GdD~ 163 (379)
+. +.....++ +.++|.++++|-|.
T Consensus 267 ~agprea~~ha~ir~n~G~th~ivgrdh 294 (573)
T 1m8p_A 267 MGGPREAIWHAIIRKNHGATHFIVGRDH 294 (573)
T ss_dssp CCHHHHHHHHHHHHHHHTCSEEEECTTT
T ss_pred ccCchHHHHHHHHHHHCCCCeEEECCCC
Confidence 11 22333433 56899999999875
No 93
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=87.19 E-value=4.3 Score=41.92 Aligned_cols=93 Identities=8% Similarity=0.012 Sum_probs=55.0
Q ss_pred EEEEecccCcCCHHHHHHHHHHH-HcCCeEEEEEccchhhhccCCCCCCCHHHHHHHHhcCc---cccEEEe-CCCccc-
Q 016998 67 RVYMDGCFDLMHYGHANALRQAK-ALGDELVVGVVSDEEIIANKGPPVLSMEERLALVSGLK---WVDEVIA-NAPYAI- 140 (379)
Q Consensus 67 ~V~~~G~FD~lH~GH~~lL~qA~-~~~d~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~---~VD~Vv~-~~p~~~- 140 (379)
+|+..=+-+++|.||..++++|. +.++.|++ ++ .+-. +++-=.+.+-|++..+.+. --+.++. -.|+.+
T Consensus 165 ~v~afqtrnp~Hrah~~~~~~~~~~~~~~lll--~p--l~g~-~k~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~p~~m~ 239 (552)
T 3cr8_A 165 RIIAWQARQPMHRAQYEFCLKSAIENEANLLL--HP--QVGG-DITEAPAYFGLVRSFLAIRDRFPAATTQLSLLPAPPP 239 (552)
T ss_dssp SEEEECCSSCCCHHHHHHHHHHHHHTTCEEEE--CC--BCCC-CTTTCTTHHHHHHHHHHHGGGSCGGGEEECBBCSCCC
T ss_pred ceEEEecCCCCchHHHHHHHHHHHhcCCeEEE--Ee--ccCC-CCCCCCCHHHHHHHHHHHHHhCCCccEEEeecchhhc
Confidence 57777999999999999999998 66774444 33 1211 2234567888888877641 1222331 233322
Q ss_pred ----cHHHHHHHh-hccCccEEEEcCCCC
Q 016998 141 ----TEQFMNRLF-NEHKIDYIIHGDDPC 164 (379)
Q Consensus 141 ----t~efl~~ll-~~~~~d~VV~GdD~~ 164 (379)
.+.-+..++ +.|+|.++++|-|..
T Consensus 240 ~agprea~~ha~~r~n~G~th~ivGrdha 268 (552)
T 3cr8_A 240 EASGRALLLRAIVARNFGCSLLIAGGEHQ 268 (552)
T ss_dssp CSCSHHHHHHHHHHHHHTCSEEEC-----
T ss_pred ccCcHHHHHHHHHHHhCCCCeeeeCCCCC
Confidence 134445544 458999999999864
No 94
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=68.32 E-value=19 Score=37.84 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=58.8
Q ss_pred eEEEEecccCcCCHHHHHHHHHHHH-cCC------eEEEEEccchhhhccCCCCCCCHHHHHHHHhcCcc-----ccEEE
Q 016998 66 VRVYMDGCFDLMHYGHANALRQAKA-LGD------ELVVGVVSDEEIIANKGPPVLSMEERLALVSGLKW-----VDEVI 133 (379)
Q Consensus 66 ~~V~~~G~FD~lH~GH~~lL~qA~~-~~d------~LiVgV~sd~~i~~~K~~pi~t~eER~~~l~~~~~-----VD~Vv 133 (379)
++|++.=+-+++|.||..|++.|.+ .+| .|.+ |+ .+ ..+++-=++.+-|++..+.+-- -+.++
T Consensus 413 ~~VvafqtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll--~p--l~-G~tk~~di~~~~r~~~~~~~~~~~y~p~~~~~ 487 (630)
T 1x6v_B 413 DAVSAFQLRNPVHNGHALLMQDTHKQLLERGYRRPVLLL--HP--LG-GWTKDDDVPLMWRMKQHAAVLEEGVLNPETTV 487 (630)
T ss_dssp SEEEEEEESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEE--EE--BC-SCCCTTSCCHHHHHHHHHHHHHTTSSCGGGEE
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCcEEE--Ee--Cc-CCCCCCCCCHHHHHHHHHHHHHcCCCCCcceE
Confidence 3678888999999999999999986 344 2333 32 12 1122345688889888776411 13343
Q ss_pred e-CCCccc--c---HHHHHHHh-hccCccEEEEcCCCC
Q 016998 134 A-NAPYAI--T---EQFMNRLF-NEHKIDYIIHGDDPC 164 (379)
Q Consensus 134 ~-~~p~~~--t---~efl~~ll-~~~~~d~VV~GdD~~ 164 (379)
. ..|..+ . +.-+..++ +.++|.++++|-|..
T Consensus 488 l~~~p~~mryaGPrEa~~hai~rkN~Gcth~IVGrdhA 525 (630)
T 1x6v_B 488 VAIFPSPMMYAGPTEVQWHCRARMVAGANFYIVGRDPA 525 (630)
T ss_dssp ECCBCCCCCCCHHHHHHHHHHHHHHTTCSEEEECSSTT
T ss_pred EeeccchhhhcCcHHHHHHHHHHHhCCCCeEEECCCCC
Confidence 3 223321 1 34445544 459999999999974
No 95
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=48.52 E-value=30 Score=35.70 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=54.0
Q ss_pred EEEcCccccCChHHHHHHHHHHh-cCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc--cCcC-ceEeCC-CCC-
Q 016998 259 VYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYVD-EVIIGA-PWE- 332 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~-~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~Vd-~Vii~~-~~~- 332 (379)
|+--=++.|+|.||..++++|.. .+|.|+|-.. +-..|. -=++.+-|+...+++ .|-. .|++.. |..
T Consensus 193 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~pl----~g~~k~---~di~~~~R~~~~~~~~~~~p~~~v~l~~~p~~m 265 (573)
T 1m8p_A 193 VVAFQTRNPMHRAHRELTVRAARSRQANVLIHPV----VGLTKP---GDIDHFTRVRAYQALLPRYPNGMAVLGLLGLAM 265 (573)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEECCB----CCCCCT---TCHHHHHHHHHHHHHGGGSSTTSEEECBBCCCC
T ss_pred EEEEeeCCCcchhhHHHHHHHHHhcCCcEEEEeC----CCCCCC---CCCCHHHHHHHHHHHHHhCCCCcEEEEecCchh
Confidence 44467899999999999998885 4886665422 112231 235888899998887 3422 344431 111
Q ss_pred ----c-----hHHHHHHcCCcEEEEcCC
Q 016998 333 ----V-----TKDMITTFNICLVVHGTV 351 (379)
Q Consensus 333 ----~-----~~~~i~~~~~d~vv~G~d 351 (379)
. -.-+-+.+++..++-|-|
T Consensus 266 ~~agprea~~ha~ir~n~G~th~ivgrd 293 (573)
T 1m8p_A 266 RMGGPREAIWHAIIRKNHGATHFIVGRD 293 (573)
T ss_dssp CCCHHHHHHHHHHHHHHHTCSEEEECTT
T ss_pred hccCchHHHHHHHHHHHCCCCeEEECCC
Confidence 1 133556678888888854
No 96
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=35.56 E-value=3.2e+02 Score=26.78 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=52.8
Q ss_pred EEEcCccccCChHHHHHHHHHH-hcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc--cCcC-ceEeCC-C---
Q 016998 259 VYIDGAFDLFHAGHVEILKKAR-QLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYVD-EVIIGA-P--- 330 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~-~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~Vd-~Vii~~-~--- 330 (379)
|+--.+++++|.||.+++.++. +.+|-|+|=- .+-..|. -=++.+-|+...+++ .|.. .|++.. |
T Consensus 190 VvafqtrNP~HraH~e~~~r~a~e~~~~lllhP----lvG~tK~---~Dip~~vR~~~~~~~l~~yp~~~v~l~~~p~~m 262 (395)
T 1r6x_A 190 VVAFQTRNPMHRAHRELTVRAAREANAKVLIHP----VVGLTKP---GDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 262 (395)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHTTCEEEECC----BCSBCCT---TCCCHHHHHHHHHHHGGGSSTTCEEECCBCCBC
T ss_pred EEEeccCCCcchhhHHHHHHHHHHcCCcEEEEE----CCCCCCC---CCCCHHHHHHHHHHHHHhCCCccEEEEecchhh
Confidence 5557899999999977776555 5566444322 2222332 246889999888887 3422 244321 1
Q ss_pred --CCchHH-----HHHHcCCcEEEEcCCC
Q 016998 331 --WEVTKD-----MITTFNICLVVHGTVS 352 (379)
Q Consensus 331 --~~~~~~-----~i~~~~~d~vv~G~d~ 352 (379)
.+..+- +-+++++..++.|-|.
T Consensus 263 ryAGPrEai~HAiiRkN~GcthfIVGRDh 291 (395)
T 1r6x_A 263 RMSGDREAVWHAIIRKNYGASHFIVGRDH 291 (395)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEEECTTT
T ss_pred hhcCcHHHHHHHHHHHHcCCceEEECCCC
Confidence 112222 3456799999999764
No 97
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=34.38 E-value=50 Score=33.75 Aligned_cols=86 Identities=15% Similarity=0.131 Sum_probs=54.6
Q ss_pred EEEcCccccCChHHHHHHHHHHh-cCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc--cCc--CceEeCC-C--
Q 016998 259 VYIDGAFDLFHAGHVEILKKARQ-LGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV--DEVIIGA-P-- 330 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~~-~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V--d~Vii~~-~-- 330 (379)
|+--=++.|+|.||..++++|.. .+|.|+|=...- ..|. .=++.+-|+...+++ .|. +.|++.. |
T Consensus 166 v~afqtrnP~Hr~H~~l~~~a~~~~~~~llv~p~~g----~~k~---~di~~~~R~~~~~~~~~~~~p~~~v~~~~~p~~ 238 (546)
T 2gks_A 166 IVAFQTRNPMHRVHEELTKRAMEKVGGGLLLHPVVG----LTKP---GDVDVYTRMRIYKVLYEKYYDKKKTILAFLPLA 238 (546)
T ss_dssp EEEECCSSCCCHHHHHHHHHHHHHHTSEEEECCBCS----BCCT---TSCCHHHHHHHHHHHHHHHSCTTTEEECBBCCB
T ss_pred EEEEecCCCCcHHHHHHHHHHHHhcCCcEEEEeCcC----CCCC---CCCCHHHHHHHHHHHHHhcCCCCcEEEeecCch
Confidence 44467899999999999998886 688776643221 2232 245889999888877 332 3344421 1
Q ss_pred ---CCc----hHH-HHHHcCCcEEEEcCC
Q 016998 331 ---WEV----TKD-MITTFNICLVVHGTV 351 (379)
Q Consensus 331 ---~~~----~~~-~i~~~~~d~vv~G~d 351 (379)
.+. ... +-+.+++.-++-|-|
T Consensus 239 m~~agprea~~ha~ir~n~G~th~ivgrd 267 (546)
T 2gks_A 239 MRMAGPREALWHGIIRRNYGATHFIVGRD 267 (546)
T ss_dssp CCCCTHHHHHHHHHHHHHTTCSEEEECTT
T ss_pred hhccCchHHHHHHHHHHhCCCCeEEECCC
Confidence 111 122 346678888888854
No 98
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=26.42 E-value=1e+02 Score=31.25 Aligned_cols=87 Identities=15% Similarity=0.144 Sum_probs=53.1
Q ss_pred EEEcCccccCChHHHHHHHHHH-hcCCEEEEEEecCcchhccCCCCCCCCCHHHHHHHHHHc--cCc-CceEeC-CCC--
Q 016998 259 VYIDGAFDLFHAGHVEILKKAR-QLGDFLLVGIYTDQIVSEHRGSYHPIMHLHERSLSVLAC--RYV-DEVIIG-APW-- 331 (379)
Q Consensus 259 v~~~G~FDl~H~GHi~~L~~A~-~~gd~liVgv~~D~~v~~~Kg~~~pi~~~~eR~~~v~~~--~~V-d~Vii~-~~~-- 331 (379)
|+--.+++++|.||.+++.++. +.+|-|+|=-. +-..|. -=++.+-|+...+++ .|. +.|++. -|.
T Consensus 191 v~afqtrnP~HraH~e~~~~~a~e~~~~lll~pl----~g~~k~---~di~~~~r~~~~~~~~~~yp~~~~~l~~~p~~m 263 (511)
T 1g8f_A 191 VVAFQTRNPMHRAHRELTVRAAREANAKVLIHPV----VGLTKP---GDIDHHTRVRVYQEIIKRYPNGIAFLSLLPLAM 263 (511)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHHTCEEEEEEB----CSBCST---TCCCHHHHHHHHHHHGGGSCTTSEEECCBCCBC
T ss_pred EEEEecCCCCchHHHHHHHHHHHHcCCcEEEEEC----CCCCCC---CCCCHHHHHHHHHHHHHhCCcccEEEEecchhh
Confidence 5557799999999987777555 55775544322 222232 246899999988888 342 234431 111
Q ss_pred ---CchHH-----HHHHcCCcEEEEcCCC
Q 016998 332 ---EVTKD-----MITTFNICLVVHGTVS 352 (379)
Q Consensus 332 ---~~~~~-----~i~~~~~d~vv~G~d~ 352 (379)
+..+- +-+++++..++-|.|.
T Consensus 264 ~yaGprea~~hai~r~n~G~th~IvGrdh 292 (511)
T 1g8f_A 264 RMSGDREAVWHAIIRKNYGASHFIVGRDH 292 (511)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSEEECCTTT
T ss_pred hccCcHHHHHHHHHHHhCCCceEEeCCCC
Confidence 12112 3456899999999764
Done!