Query 017000
Match_columns 379
No_of_seqs 136 out of 1448
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 04:44:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017000.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017000hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0022 Alcohol dehydrogenase, 100.0 2.7E-69 5.9E-74 470.2 33.6 374 4-377 2-375 (375)
2 COG1062 AdhC Zn-dependent alco 100.0 3.9E-69 8.5E-74 477.1 33.1 366 8-377 1-366 (366)
3 COG1064 AdhP Zn-dependent alco 100.0 1.3E-66 2.9E-71 471.6 33.2 335 7-378 1-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.7E-60 3.7E-65 418.5 30.8 342 8-379 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 2.4E-59 5.1E-64 410.1 30.8 349 1-378 1-355 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 2.3E-56 5.1E-61 427.1 36.1 374 4-377 5-381 (381)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 4.4E-56 9.6E-61 423.3 35.5 367 10-377 2-368 (368)
8 cd08300 alcohol_DH_class_III c 100.0 1.6E-55 3.4E-60 419.8 36.3 367 9-376 2-368 (368)
9 cd08301 alcohol_DH_plants Plan 100.0 2.8E-55 6E-60 418.5 35.6 369 8-376 1-369 (369)
10 cd08281 liver_ADH_like1 Zinc-d 100.0 6.1E-55 1.3E-59 416.2 35.1 360 10-374 1-369 (371)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 4.3E-54 9.2E-59 408.6 34.2 355 9-376 1-357 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 9E-54 2E-58 408.3 35.9 365 8-378 11-377 (378)
13 cd08277 liver_alcohol_DH_like 100.0 3.4E-53 7.4E-58 403.3 35.4 365 8-376 1-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 1.3E-52 2.7E-57 395.9 33.3 337 10-377 1-339 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 2.7E-51 5.9E-56 387.1 32.6 336 8-377 3-343 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 8E-51 1.7E-55 382.4 32.8 341 10-377 1-350 (350)
17 TIGR02819 fdhA_non_GSH formald 100.0 1.2E-50 2.6E-55 387.6 31.6 346 9-378 2-391 (393)
18 COG0604 Qor NADPH:quinone redu 100.0 1.6E-50 3.4E-55 375.6 29.2 315 10-377 1-326 (326)
19 PLN02586 probable cinnamyl alc 100.0 2.4E-49 5.3E-54 375.6 32.4 338 5-377 8-353 (360)
20 cd08299 alcohol_DH_class_I_II_ 100.0 1.4E-48 3.1E-53 372.2 36.6 368 7-377 5-373 (373)
21 PRK10309 galactitol-1-phosphat 100.0 7.2E-49 1.6E-53 371.4 33.2 338 10-377 1-346 (347)
22 PLN02178 cinnamyl-alcohol dehy 100.0 3.6E-48 7.8E-53 368.8 32.8 332 12-378 9-349 (375)
23 TIGR03201 dearomat_had 6-hydro 100.0 3.9E-48 8.4E-53 366.5 32.1 332 13-376 2-348 (349)
24 cd05279 Zn_ADH1 Liver alcohol 100.0 9.2E-48 2E-52 366.0 34.9 364 10-376 1-365 (365)
25 cd08230 glucose_DH Glucose deh 100.0 4.3E-48 9.4E-53 367.1 31.5 334 10-377 1-355 (355)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.2E-47 2.6E-52 359.7 30.9 321 13-376 2-329 (329)
27 PLN02514 cinnamyl-alcohol dehy 100.0 2.8E-47 6E-52 361.4 33.5 347 1-378 1-351 (357)
28 cd08231 MDR_TM0436_like Hypoth 100.0 6.8E-47 1.5E-51 359.8 33.5 348 11-377 2-361 (361)
29 cd08233 butanediol_DH_like (2R 100.0 8.1E-47 1.8E-51 357.9 33.2 335 10-376 1-351 (351)
30 cd08278 benzyl_alcohol_DH Benz 100.0 4.3E-46 9.4E-51 354.5 34.4 362 8-376 1-365 (365)
31 KOG1197 Predicted quinone oxid 100.0 4.2E-47 9.1E-52 321.7 23.0 317 5-378 4-331 (336)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 1.6E-45 3.5E-50 349.1 34.4 342 10-377 1-351 (351)
33 cd08237 ribitol-5-phosphate_DH 100.0 3.8E-46 8.3E-51 351.4 26.8 320 10-378 3-340 (341)
34 cd08279 Zn_ADH_class_III Class 100.0 1.4E-44 2.9E-49 344.1 34.4 360 10-375 1-362 (363)
35 PRK10083 putative oxidoreducta 100.0 1.1E-44 2.5E-49 341.6 33.1 334 10-379 1-339 (339)
36 cd08238 sorbose_phosphate_red 100.0 8.4E-45 1.8E-49 350.4 32.0 331 8-378 1-369 (410)
37 cd05278 FDH_like Formaldehyde 100.0 8.3E-44 1.8E-48 336.8 34.9 340 10-376 1-346 (347)
38 cd08296 CAD_like Cinnamyl alco 100.0 6.5E-44 1.4E-48 335.6 32.7 330 10-376 1-333 (333)
39 cd08283 FDH_like_1 Glutathione 100.0 2.5E-43 5.4E-48 337.8 34.2 348 10-376 1-385 (386)
40 cd08256 Zn_ADH2 Alcohol dehydr 100.0 2.4E-43 5.3E-48 334.0 33.7 336 10-375 1-350 (350)
41 cd08286 FDH_like_ADH2 formalde 100.0 4.3E-43 9.2E-48 331.7 33.4 337 10-377 1-345 (345)
42 TIGR01202 bchC 2-desacetyl-2-h 100.0 7.6E-44 1.6E-48 331.1 27.6 302 9-376 1-308 (308)
43 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.1E-42 2.4E-47 331.5 34.2 361 10-376 1-367 (367)
44 cd05284 arabinose_DH_like D-ar 100.0 7.6E-43 1.7E-47 329.3 32.6 333 10-377 1-340 (340)
45 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2E-42 4.4E-47 327.1 33.4 339 10-376 1-344 (345)
46 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.3E-42 4.9E-47 327.4 33.1 336 10-376 1-349 (350)
47 cd08284 FDH_like_2 Glutathione 100.0 7.7E-42 1.7E-46 323.0 33.2 338 10-376 1-343 (344)
48 cd08246 crotonyl_coA_red croto 100.0 6.9E-42 1.5E-46 328.9 32.4 340 6-375 9-391 (393)
49 PRK05396 tdh L-threonine 3-deh 100.0 1.4E-41 3E-46 320.9 33.1 337 10-378 1-341 (341)
50 PLN02702 L-idonate 5-dehydroge 100.0 1.4E-41 3.1E-46 323.6 33.3 338 8-376 16-363 (364)
51 cd08282 PFDH_like Pseudomonas 100.0 1.3E-41 2.7E-46 325.0 32.7 343 10-377 1-375 (375)
52 cd08291 ETR_like_1 2-enoyl thi 100.0 4.9E-42 1.1E-46 321.7 28.7 309 10-376 1-324 (324)
53 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.7E-41 7.9E-46 317.5 33.4 333 10-377 1-337 (337)
54 cd08287 FDH_like_ADH3 formalde 100.0 4.1E-41 9E-46 318.1 33.1 334 10-376 1-344 (345)
55 cd08235 iditol_2_DH_like L-idi 100.0 4E-41 8.8E-46 317.9 32.7 335 10-376 1-343 (343)
56 TIGR01751 crot-CoA-red crotony 100.0 4.1E-41 9E-46 323.8 32.0 344 5-378 3-388 (398)
57 cd08242 MDR_like Medium chain 100.0 6.5E-41 1.4E-45 313.4 31.9 316 10-376 1-318 (319)
58 cd08262 Zn_ADH8 Alcohol dehydr 100.0 7.4E-41 1.6E-45 315.9 32.3 324 10-376 1-341 (341)
59 PRK13771 putative alcohol dehy 100.0 4.6E-41 1E-45 316.4 29.9 329 10-377 1-333 (334)
60 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.3E-40 2.8E-45 318.9 32.5 336 10-375 29-383 (384)
61 PRK09422 ethanol-active dehydr 100.0 1.9E-40 4.1E-45 312.7 32.6 333 10-378 1-337 (338)
62 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.8E-40 3.9E-45 312.6 32.0 333 10-377 1-338 (338)
63 cd05285 sorbitol_DH Sorbitol d 100.0 2.4E-40 5.1E-45 312.7 32.1 331 12-375 1-341 (343)
64 cd05281 TDH Threonine dehydrog 100.0 4.1E-40 8.8E-45 310.9 33.0 336 10-376 1-340 (341)
65 cd05283 CAD1 Cinnamyl alcohol 100.0 2.2E-40 4.7E-45 312.2 30.5 334 11-376 1-337 (337)
66 cd08236 sugar_DH NAD(P)-depend 100.0 5.4E-40 1.2E-44 310.3 32.4 336 10-375 1-343 (343)
67 PLN03154 putative allyl alcoho 100.0 2E-40 4.3E-45 313.2 29.3 316 6-379 5-347 (348)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 1.3E-39 2.7E-44 307.5 32.9 334 10-377 1-341 (341)
69 TIGR03366 HpnZ_proposed putati 100.0 3.8E-41 8.3E-46 309.0 21.7 269 66-358 1-280 (280)
70 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.1E-39 2.4E-44 306.4 31.8 329 10-376 1-332 (332)
71 cd08232 idonate-5-DH L-idonate 100.0 1.3E-39 2.8E-44 307.2 31.6 331 14-377 2-339 (339)
72 cd08292 ETR_like_2 2-enoyl thi 100.0 7.1E-40 1.5E-44 306.9 29.4 309 10-376 1-324 (324)
73 KOG0025 Zn2+-binding dehydroge 100.0 1.4E-39 3.1E-44 280.8 26.5 319 3-378 13-353 (354)
74 cd08234 threonine_DH_like L-th 100.0 4.7E-39 1E-43 302.7 31.7 331 10-375 1-333 (334)
75 TIGR00692 tdh L-threonine 3-de 100.0 6.3E-39 1.4E-43 302.6 32.1 332 16-377 5-340 (340)
76 cd08295 double_bond_reductase_ 100.0 2.3E-39 4.9E-44 305.4 27.9 311 9-377 7-338 (338)
77 cd08266 Zn_ADH_like1 Alcohol d 100.0 8.8E-39 1.9E-43 301.1 31.2 334 10-376 1-341 (342)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 5.3E-39 1.2E-43 301.2 29.1 320 10-373 1-324 (325)
79 cd08293 PTGR2 Prostaglandin re 100.0 6.8E-39 1.5E-43 303.0 29.6 299 22-377 23-345 (345)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 2.2E-38 4.8E-43 297.5 30.9 323 10-375 1-329 (329)
81 cd08245 CAD Cinnamyl alcohol d 100.0 3.4E-38 7.4E-43 296.4 29.9 327 11-375 1-330 (330)
82 cd08294 leukotriene_B4_DH_like 100.0 2.1E-38 4.6E-43 297.6 28.3 304 9-377 2-329 (329)
83 cd08274 MDR9 Medium chain dehy 100.0 2.7E-38 5.8E-43 299.5 29.1 322 10-376 1-349 (350)
84 TIGR02825 B4_12hDH leukotriene 100.0 2.2E-38 4.8E-43 297.1 27.5 291 22-376 19-325 (325)
85 PRK10754 quinone oxidoreductas 100.0 7.1E-38 1.5E-42 293.8 28.5 314 9-376 1-326 (327)
86 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.5E-37 5.5E-42 287.3 29.0 300 10-341 1-306 (306)
87 cd08290 ETR 2-enoyl thioester 100.0 1.4E-37 3.1E-42 293.5 27.4 312 10-377 1-341 (341)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.9E-37 8.4E-42 289.9 27.6 308 11-376 1-334 (336)
89 cd08249 enoyl_reductase_like e 100.0 1.8E-36 3.9E-41 285.7 29.9 315 10-377 1-339 (339)
90 cd08244 MDR_enoyl_red Possible 100.0 2.4E-36 5.3E-41 282.8 30.6 312 10-377 1-324 (324)
91 cd08250 Mgc45594_like Mgc45594 100.0 1.3E-36 2.7E-41 285.6 28.2 311 9-376 1-329 (329)
92 PTZ00354 alcohol dehydrogenase 100.0 2.6E-36 5.6E-41 283.8 29.5 313 9-378 1-329 (334)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 5.7E-36 1.2E-40 280.5 30.9 313 10-377 1-325 (325)
94 KOG1198 Zinc-binding oxidoredu 100.0 9.6E-37 2.1E-41 283.4 24.9 301 22-379 20-347 (347)
95 cd08276 MDR7 Medium chain dehy 100.0 9.8E-36 2.1E-40 280.0 31.8 330 10-377 1-336 (336)
96 cd05282 ETR_like 2-enoyl thioe 100.0 1.4E-35 2.9E-40 277.7 28.0 298 22-376 14-323 (323)
97 cd08243 quinone_oxidoreductase 100.0 2.4E-35 5.2E-40 275.4 28.6 311 10-375 1-319 (320)
98 cd08269 Zn_ADH9 Alcohol dehydr 100.0 4.7E-35 1E-39 272.7 29.5 303 16-376 2-312 (312)
99 cd08270 MDR4 Medium chain dehy 100.0 2.9E-35 6.3E-40 273.3 27.7 297 10-377 1-305 (305)
100 TIGR02823 oxido_YhdH putative 100.0 1.2E-34 2.7E-39 271.4 30.6 311 11-377 1-323 (323)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 1.1E-34 2.4E-39 272.0 29.9 314 10-377 1-326 (326)
102 cd08252 AL_MDR Arginate lyase 100.0 1E-34 2.3E-39 273.3 29.5 312 10-376 1-336 (336)
103 cd08248 RTN4I1 Human Reticulon 100.0 6.7E-35 1.5E-39 276.2 24.8 311 10-376 1-350 (350)
104 cd08247 AST1_like AST1 is a cy 100.0 9.2E-34 2E-38 268.7 27.3 317 11-377 2-352 (352)
105 cd08288 MDR_yhdh Yhdh putative 100.0 3E-33 6.6E-38 262.0 30.4 312 10-377 1-324 (324)
106 cd05276 p53_inducible_oxidored 100.0 2E-33 4.3E-38 262.1 28.7 309 10-375 1-323 (323)
107 cd08253 zeta_crystallin Zeta-c 100.0 3E-33 6.4E-38 261.3 29.3 314 10-376 1-324 (325)
108 cd05286 QOR2 Quinone oxidoredu 100.0 3.3E-33 7.2E-38 260.2 29.3 308 11-376 1-319 (320)
109 COG2130 Putative NADP-dependen 100.0 2.8E-33 6E-38 244.4 25.4 298 22-379 27-340 (340)
110 cd08272 MDR6 Medium chain dehy 100.0 5.3E-33 1.2E-37 259.9 28.0 311 10-377 1-326 (326)
111 cd08271 MDR5 Medium chain dehy 100.0 8.4E-33 1.8E-37 258.7 29.4 314 10-377 1-325 (325)
112 cd08273 MDR8 Medium chain dehy 100.0 8.3E-33 1.8E-37 259.8 28.4 305 11-375 2-330 (331)
113 cd05288 PGDH Prostaglandin deh 100.0 5.3E-33 1.1E-37 260.9 26.8 304 11-375 3-329 (329)
114 cd05188 MDR Medium chain reduc 100.0 2.9E-33 6.3E-38 254.9 24.2 268 36-337 1-270 (271)
115 cd08268 MDR2 Medium chain dehy 100.0 5.7E-32 1.2E-36 253.1 29.7 315 10-376 1-327 (328)
116 TIGR02824 quinone_pig3 putativ 100.0 5.8E-32 1.3E-36 252.7 28.9 311 10-377 1-325 (325)
117 cd08251 polyketide_synthase po 100.0 3.1E-32 6.6E-37 252.2 26.6 292 29-375 2-303 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 5.8E-32 1.3E-36 250.9 25.0 301 10-375 1-309 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 5.1E-31 1.1E-35 245.9 28.1 309 10-376 1-323 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 1E-30 2.2E-35 245.9 29.9 310 11-377 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 4.1E-31 8.9E-36 246.6 25.7 295 23-375 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.5E-30 3.2E-35 239.0 23.2 282 35-375 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 7.2E-30 1.6E-34 234.1 23.4 277 39-375 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 1.6E-27 3.4E-32 218.5 22.1 250 56-375 14-277 (277)
125 KOG1202 Animal-type fatty acid 99.9 2.2E-27 4.8E-32 235.2 16.2 292 22-377 1429-1741(2376)
126 KOG1196 Predicted NAD-dependen 99.9 4.3E-25 9.4E-30 192.5 24.8 297 22-378 24-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 3.6E-23 7.7E-28 162.0 7.7 108 34-163 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 3.5E-17 7.6E-22 132.3 12.1 127 205-339 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.2E-12 2.6E-17 124.1 14.6 175 183-378 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 1.3E-11 2.9E-16 120.0 15.8 154 191-350 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 1.6E-12 3.4E-17 104.5 2.6 120 238-375 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 2.5E-07 5.4E-12 84.5 9.6 167 189-369 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.6 1.1E-06 2.4E-11 85.7 13.5 106 193-300 162-288 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.4 4.5E-06 9.8E-11 79.9 13.2 103 182-299 198-302 (425)
135 TIGR01035 hemA glutamyl-tRNA r 98.3 4.3E-08 9.3E-13 94.7 -4.1 159 66-276 89-252 (417)
136 TIGR00936 ahcY adenosylhomocys 98.2 1.5E-05 3.3E-10 75.8 12.0 102 183-299 182-285 (406)
137 PF11017 DUF2855: Protein of u 98.1 7.7E-05 1.7E-09 68.1 14.4 140 148-300 90-235 (314)
138 PRK00517 prmA ribosomal protei 98.1 2E-05 4.3E-10 71.0 9.9 133 148-298 78-215 (250)
139 PRK08306 dipicolinate synthase 98.1 5E-05 1.1E-09 69.9 12.6 95 194-300 151-245 (296)
140 PLN02494 adenosylhomocysteinas 98.1 2.9E-05 6.2E-10 74.7 11.1 101 183-298 241-343 (477)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.1 1.2E-05 2.6E-10 74.8 8.2 108 158-277 139-251 (311)
142 PRK00045 hemA glutamyl-tRNA re 98.0 2.2E-07 4.8E-12 90.0 -4.9 158 67-276 92-254 (423)
143 TIGR00518 alaDH alanine dehydr 97.9 0.00012 2.6E-09 69.6 10.6 98 194-299 166-270 (370)
144 PTZ00075 Adenosylhomocysteinas 97.8 0.00012 2.7E-09 70.6 9.8 101 184-299 242-344 (476)
145 PRK08324 short chain dehydroge 97.7 0.0002 4.4E-09 73.9 11.2 138 147-298 385-559 (681)
146 TIGR00406 prmA ribosomal prote 97.7 0.00023 5E-09 65.4 9.3 98 192-298 157-261 (288)
147 COG2518 Pcm Protein-L-isoaspar 97.7 0.00023 5E-09 61.0 8.5 99 186-295 64-168 (209)
148 PRK12771 putative glutamate sy 97.6 5.9E-05 1.3E-09 76.1 4.7 80 191-276 133-234 (564)
149 TIGR02853 spore_dpaA dipicolin 97.5 0.001 2.2E-08 61.0 11.5 94 194-299 150-243 (287)
150 PF01488 Shikimate_DH: Shikima 97.5 0.00054 1.2E-08 55.4 8.2 73 194-275 11-86 (135)
151 COG4221 Short-chain alcohol de 97.5 0.00067 1.5E-08 59.3 9.0 79 194-274 5-91 (246)
152 COG3967 DltE Short-chain dehyd 97.4 0.00087 1.9E-08 56.8 8.7 79 194-274 4-88 (245)
153 PRK06182 short chain dehydroge 97.4 0.0026 5.6E-08 57.9 11.7 79 194-274 2-84 (273)
154 PRK05693 short chain dehydroge 97.4 0.0032 6.9E-08 57.3 12.3 77 196-274 2-82 (274)
155 KOG1209 1-Acyl dihydroxyaceton 97.3 0.0021 4.5E-08 54.8 9.8 104 194-299 6-141 (289)
156 PRK00377 cbiT cobalt-precorrin 97.3 0.0026 5.7E-08 55.0 10.6 102 188-295 34-144 (198)
157 PRK05786 fabG 3-ketoacyl-(acyl 97.3 0.0041 9E-08 55.1 11.8 102 194-298 4-137 (238)
158 PRK13943 protein-L-isoaspartat 97.2 0.0029 6.4E-08 58.8 10.4 102 187-295 73-179 (322)
159 PRK11705 cyclopropane fatty ac 97.2 0.0016 3.4E-08 62.3 8.7 109 178-296 151-267 (383)
160 COG2242 CobL Precorrin-6B meth 97.2 0.0053 1.1E-07 51.6 10.4 104 187-297 27-136 (187)
161 PRK05993 short chain dehydroge 97.2 0.003 6.6E-08 57.6 10.0 79 194-274 3-86 (277)
162 TIGR00438 rrmJ cell division p 97.1 0.0068 1.5E-07 51.9 11.4 101 190-296 28-146 (188)
163 PF13460 NAD_binding_10: NADH( 97.1 0.0063 1.4E-07 51.6 10.6 93 198-299 1-100 (183)
164 KOG1205 Predicted dehydrogenas 97.1 0.0054 1.2E-07 55.5 10.3 105 194-300 11-153 (282)
165 COG0300 DltE Short-chain dehyd 97.0 0.0055 1.2E-07 55.0 10.1 80 193-274 4-94 (265)
166 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0039 8.4E-08 53.0 8.8 89 193-296 34-127 (178)
167 PRK07326 short chain dehydroge 97.0 0.0099 2.1E-07 52.6 11.5 79 194-274 5-92 (237)
168 PRK14967 putative methyltransf 96.9 0.046 1E-06 48.2 14.9 98 188-295 30-158 (223)
169 PRK04148 hypothetical protein; 96.9 0.0051 1.1E-07 49.1 7.7 87 193-288 15-101 (134)
170 PRK12742 oxidoreductase; Provi 96.9 0.021 4.6E-07 50.5 12.7 101 194-299 5-134 (237)
171 PRK05872 short chain dehydroge 96.9 0.012 2.6E-07 54.3 11.4 79 194-274 8-95 (296)
172 PRK08017 oxidoreductase; Provi 96.8 0.0086 1.9E-07 53.7 9.9 77 196-274 3-84 (256)
173 COG1748 LYS9 Saccharopine dehy 96.8 0.016 3.4E-07 55.0 11.2 95 196-297 2-100 (389)
174 PRK06139 short chain dehydroge 96.8 0.0059 1.3E-07 57.3 8.5 79 194-274 6-94 (330)
175 PF00670 AdoHcyase_NAD: S-aden 96.8 0.0096 2.1E-07 49.1 8.5 92 192-298 20-112 (162)
176 COG4122 Predicted O-methyltran 96.8 0.014 3.1E-07 50.8 9.9 104 190-296 55-166 (219)
177 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.02 4.2E-07 56.3 12.2 80 193-274 208-294 (450)
178 PRK07806 short chain dehydroge 96.7 0.023 4.9E-07 50.7 11.6 101 194-297 5-135 (248)
179 PF12847 Methyltransf_18: Meth 96.7 0.014 3.1E-07 45.0 9.0 92 194-294 1-109 (112)
180 TIGR02469 CbiT precorrin-6Y C5 96.7 0.0064 1.4E-07 47.8 7.2 100 188-295 13-121 (124)
181 PRK08177 short chain dehydroge 96.7 0.012 2.5E-07 51.9 9.4 77 196-274 2-81 (225)
182 PRK07576 short chain dehydroge 96.7 0.029 6.3E-07 50.7 12.1 78 194-273 8-95 (264)
183 PRK13942 protein-L-isoaspartat 96.7 0.021 4.5E-07 50.0 10.7 101 186-295 68-175 (212)
184 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0063 1.4E-07 51.2 7.0 101 195-298 20-141 (168)
185 PRK07109 short chain dehydroge 96.7 0.023 5E-07 53.5 11.5 79 194-274 7-95 (334)
186 PRK08628 short chain dehydroge 96.6 0.027 5.8E-07 50.6 11.5 79 194-274 6-93 (258)
187 PRK08265 short chain dehydroge 96.6 0.026 5.6E-07 50.9 11.4 79 194-274 5-90 (261)
188 PF01135 PCMT: Protein-L-isoas 96.6 0.0031 6.8E-08 54.8 5.1 101 186-295 64-171 (209)
189 PRK06057 short chain dehydroge 96.6 0.013 2.8E-07 52.6 9.3 79 194-274 6-89 (255)
190 PLN03209 translocon at the inn 96.6 0.038 8.2E-07 55.1 13.0 47 188-235 73-120 (576)
191 PF02353 CMAS: Mycolic acid cy 96.6 0.015 3.3E-07 52.9 9.3 101 185-297 53-167 (273)
192 PRK07060 short chain dehydroge 96.6 0.016 3.5E-07 51.5 9.4 77 194-274 8-87 (245)
193 PF06325 PrmA: Ribosomal prote 96.5 0.0098 2.1E-07 54.5 7.8 126 156-299 127-262 (295)
194 PRK12829 short chain dehydroge 96.5 0.011 2.5E-07 53.1 8.3 82 191-274 7-96 (264)
195 PRK12828 short chain dehydroge 96.5 0.015 3.3E-07 51.3 8.8 79 194-274 6-92 (239)
196 PRK06500 short chain dehydroge 96.5 0.047 1E-06 48.6 11.9 79 194-274 5-90 (249)
197 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.012 2.5E-07 53.2 7.9 78 194-273 4-88 (262)
198 PRK06841 short chain dehydroge 96.4 0.017 3.6E-07 51.8 8.8 79 194-274 14-99 (255)
199 PRK12939 short chain dehydroge 96.4 0.035 7.6E-07 49.4 10.9 79 194-274 6-94 (250)
200 PLN02780 ketoreductase/ oxidor 96.4 0.022 4.8E-07 53.2 9.8 80 194-274 52-142 (320)
201 PRK06953 short chain dehydroge 96.4 0.024 5.2E-07 49.7 9.7 77 196-274 2-80 (222)
202 PRK13944 protein-L-isoaspartat 96.4 0.017 3.6E-07 50.3 8.3 101 186-295 64-172 (205)
203 PRK06949 short chain dehydroge 96.4 0.018 3.9E-07 51.7 8.9 80 193-274 7-96 (258)
204 PRK07831 short chain dehydroge 96.4 0.021 4.5E-07 51.5 9.3 81 192-274 14-107 (262)
205 TIGR01470 cysG_Nterm siroheme 96.4 0.17 3.7E-06 43.9 14.6 93 194-297 8-101 (205)
206 PRK13940 glutamyl-tRNA reducta 96.4 0.015 3.2E-07 56.1 8.7 76 193-277 179-255 (414)
207 PRK00811 spermidine synthase; 96.4 0.021 4.6E-07 52.3 9.3 99 194-295 76-190 (283)
208 PRK06200 2,3-dihydroxy-2,3-dih 96.4 0.02 4.3E-07 51.7 9.0 79 194-274 5-90 (263)
209 PRK06718 precorrin-2 dehydroge 96.4 0.15 3.2E-06 44.2 13.9 91 194-297 9-101 (202)
210 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.0082 1.8E-07 58.9 6.9 94 188-299 27-126 (450)
211 PRK07814 short chain dehydroge 96.4 0.018 4E-07 52.0 8.7 79 194-274 9-97 (263)
212 PRK07402 precorrin-6B methylas 96.4 0.067 1.5E-06 46.1 11.8 104 186-297 32-143 (196)
213 cd01080 NAD_bind_m-THF_DH_Cycl 96.4 0.027 5.8E-07 47.3 8.8 97 172-298 21-118 (168)
214 PRK06719 precorrin-2 dehydroge 96.3 0.13 2.7E-06 42.7 12.8 88 194-295 12-99 (157)
215 PRK09186 flagellin modificatio 96.3 0.062 1.3E-06 48.1 12.0 78 194-273 3-92 (256)
216 PRK07825 short chain dehydroge 96.3 0.024 5.1E-07 51.5 9.3 78 195-274 5-88 (273)
217 COG2519 GCD14 tRNA(1-methylade 96.3 0.028 6.1E-07 49.6 9.1 104 186-297 86-196 (256)
218 PRK03369 murD UDP-N-acetylmura 96.3 0.023 5E-07 56.4 9.7 73 192-275 9-81 (488)
219 COG0169 AroE Shikimate 5-dehyd 96.3 0.01 2.2E-07 54.0 6.6 44 194-237 125-168 (283)
220 PF13241 NAD_binding_7: Putati 96.3 0.01 2.3E-07 45.4 5.7 89 194-299 6-94 (103)
221 TIGR02356 adenyl_thiF thiazole 96.3 0.033 7.1E-07 48.3 9.5 35 194-228 20-54 (202)
222 PRK08339 short chain dehydroge 96.3 0.028 6E-07 50.9 9.4 79 194-274 7-95 (263)
223 PRK06180 short chain dehydroge 96.3 0.025 5.5E-07 51.5 9.1 79 194-274 3-88 (277)
224 PRK07832 short chain dehydroge 96.2 0.072 1.6E-06 48.3 11.9 76 197-274 2-88 (272)
225 PRK07231 fabG 3-ketoacyl-(acyl 96.2 0.019 4.2E-07 51.2 8.1 79 194-274 4-91 (251)
226 cd05311 NAD_bind_2_malic_enz N 96.2 0.04 8.6E-07 48.7 9.8 93 193-297 23-129 (226)
227 PRK06484 short chain dehydroge 96.2 0.059 1.3E-06 53.9 12.2 103 193-298 267-402 (520)
228 PRK05867 short chain dehydroge 96.2 0.024 5.1E-07 50.9 8.5 79 194-274 8-96 (253)
229 PRK06128 oxidoreductase; Provi 96.2 0.059 1.3E-06 49.8 11.3 102 194-298 54-193 (300)
230 CHL00194 ycf39 Ycf39; Provisio 96.2 0.072 1.6E-06 49.6 11.8 95 197-298 2-111 (317)
231 TIGR01832 kduD 2-deoxy-D-gluco 96.2 0.031 6.8E-07 49.8 9.0 79 194-274 4-90 (248)
232 PRK09072 short chain dehydroge 96.2 0.036 7.9E-07 50.0 9.5 79 194-274 4-90 (263)
233 PRK12549 shikimate 5-dehydroge 96.2 0.036 7.7E-07 50.8 9.4 43 194-236 126-168 (284)
234 PRK07774 short chain dehydroge 96.2 0.031 6.8E-07 49.8 8.9 79 194-274 5-93 (250)
235 TIGR00080 pimt protein-L-isoas 96.2 0.012 2.5E-07 51.7 6.0 101 186-295 69-176 (215)
236 PRK09291 short chain dehydroge 96.1 0.031 6.8E-07 50.1 8.8 74 195-274 2-83 (257)
237 PRK14175 bifunctional 5,10-met 96.1 0.038 8.2E-07 50.3 9.1 95 173-298 136-232 (286)
238 PRK08263 short chain dehydroge 96.1 0.045 9.7E-07 49.8 9.8 78 195-274 3-87 (275)
239 PRK07502 cyclohexadienyl dehyd 96.1 0.061 1.3E-06 49.9 10.8 91 196-297 7-101 (307)
240 PLN02366 spermidine synthase 96.1 0.062 1.3E-06 49.8 10.6 102 193-296 90-206 (308)
241 PRK00107 gidB 16S rRNA methylt 96.1 0.045 9.7E-07 46.8 9.1 96 192-295 43-144 (187)
242 TIGR01809 Shik-DH-AROM shikima 96.1 0.021 4.5E-07 52.4 7.4 75 194-274 124-200 (282)
243 PRK07024 short chain dehydroge 96.0 0.041 9E-07 49.4 9.2 78 195-274 2-88 (257)
244 PRK08217 fabG 3-ketoacyl-(acyl 96.0 0.038 8.3E-07 49.3 8.9 78 194-273 4-91 (253)
245 PRK05866 short chain dehydroge 96.0 0.036 7.7E-07 51.1 8.9 79 194-274 39-127 (293)
246 cd01075 NAD_bind_Leu_Phe_Val_D 96.0 0.071 1.5E-06 46.2 10.1 81 193-286 26-107 (200)
247 PRK06196 oxidoreductase; Provi 96.0 0.046 9.9E-07 50.9 9.6 79 194-274 25-109 (315)
248 PRK12550 shikimate 5-dehydroge 96.0 0.035 7.7E-07 50.4 8.4 70 191-274 118-188 (272)
249 PRK07062 short chain dehydroge 96.0 0.035 7.5E-07 50.1 8.5 79 194-274 7-97 (265)
250 TIGR01318 gltD_gamma_fam gluta 96.0 0.034 7.4E-07 54.8 9.0 78 193-275 139-237 (467)
251 PRK06198 short chain dehydroge 96.0 0.036 7.7E-07 49.8 8.5 80 194-274 5-94 (260)
252 KOG0725 Reductases with broad 96.0 0.04 8.6E-07 50.1 8.7 80 194-274 7-99 (270)
253 PRK11207 tellurite resistance 96.0 0.026 5.6E-07 48.8 7.1 98 188-296 24-134 (197)
254 PRK07478 short chain dehydroge 95.9 0.044 9.5E-07 49.1 8.8 79 194-274 5-93 (254)
255 PRK07523 gluconate 5-dehydroge 95.9 0.037 8E-07 49.6 8.4 79 194-274 9-97 (255)
256 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.045 9.8E-07 48.5 8.8 79 194-274 4-92 (246)
257 PRK06483 dihydromonapterin red 95.9 0.063 1.4E-06 47.5 9.7 78 195-274 2-84 (236)
258 PRK07890 short chain dehydroge 95.9 0.05 1.1E-06 48.8 9.1 79 194-274 4-92 (258)
259 PRK06194 hypothetical protein; 95.9 0.042 9.2E-07 50.2 8.7 79 194-274 5-93 (287)
260 PF00106 adh_short: short chai 95.9 0.024 5.2E-07 47.1 6.5 78 196-274 1-90 (167)
261 PRK12823 benD 1,6-dihydroxycyc 95.9 0.049 1.1E-06 48.9 9.0 78 194-273 7-93 (260)
262 TIGR03840 TMPT_Se_Te thiopurin 95.9 0.1 2.2E-06 45.7 10.5 102 192-297 32-153 (213)
263 COG0686 Ald Alanine dehydrogen 95.9 0.049 1.1E-06 49.4 8.5 98 196-300 169-272 (371)
264 PRK06463 fabG 3-ketoacyl-(acyl 95.9 0.048 1E-06 48.9 8.8 79 194-274 6-89 (255)
265 PRK06701 short chain dehydroge 95.9 0.12 2.6E-06 47.5 11.6 103 193-298 44-183 (290)
266 PRK12809 putative oxidoreducta 95.9 0.042 9.1E-07 56.5 9.3 75 194-274 309-405 (639)
267 PRK00258 aroE shikimate 5-dehy 95.9 0.027 5.9E-07 51.5 7.2 74 193-274 121-195 (278)
268 PRK14027 quinate/shikimate deh 95.8 0.068 1.5E-06 48.9 9.6 43 194-236 126-168 (283)
269 PRK08317 hypothetical protein; 95.8 0.089 1.9E-06 46.5 10.3 101 187-296 12-124 (241)
270 PRK05876 short chain dehydroge 95.8 0.052 1.1E-06 49.5 8.9 79 194-274 5-93 (275)
271 PRK06172 short chain dehydroge 95.8 0.05 1.1E-06 48.7 8.7 79 194-274 6-94 (253)
272 PRK06179 short chain dehydroge 95.8 0.034 7.4E-07 50.4 7.7 76 195-274 4-83 (270)
273 PRK07904 short chain dehydroge 95.8 0.073 1.6E-06 47.8 9.7 81 192-274 5-97 (253)
274 PRK08703 short chain dehydroge 95.8 0.039 8.5E-07 48.9 7.9 80 194-274 5-97 (239)
275 PRK04457 spermidine synthase; 95.8 0.11 2.4E-06 47.0 10.8 97 193-294 65-175 (262)
276 PRK08267 short chain dehydroge 95.8 0.076 1.7E-06 47.7 9.9 77 196-274 2-87 (260)
277 PRK06505 enoyl-(acyl carrier p 95.8 0.067 1.5E-06 48.6 9.5 79 194-274 6-95 (271)
278 PRK08213 gluconate 5-dehydroge 95.8 0.058 1.2E-06 48.5 9.0 79 194-274 11-99 (259)
279 PRK07454 short chain dehydroge 95.8 0.071 1.5E-06 47.3 9.4 79 194-274 5-93 (241)
280 PRK08862 short chain dehydroge 95.8 0.072 1.6E-06 47.1 9.3 78 194-273 4-92 (227)
281 PRK13394 3-hydroxybutyrate deh 95.8 0.056 1.2E-06 48.5 8.8 79 194-274 6-94 (262)
282 PRK08589 short chain dehydroge 95.8 0.053 1.1E-06 49.3 8.7 79 194-274 5-92 (272)
283 PRK06079 enoyl-(acyl carrier p 95.8 0.045 9.7E-07 49.2 8.1 78 194-273 6-92 (252)
284 PRK12481 2-deoxy-D-gluconate 3 95.8 0.049 1.1E-06 48.8 8.3 79 194-274 7-93 (251)
285 PLN02476 O-methyltransferase 95.7 0.094 2E-06 47.6 10.0 104 188-295 112-227 (278)
286 PRK06482 short chain dehydroge 95.7 0.06 1.3E-06 48.9 9.0 77 196-274 3-86 (276)
287 PRK12367 short chain dehydroge 95.7 0.072 1.6E-06 47.7 9.2 73 194-274 13-89 (245)
288 PRK05854 short chain dehydroge 95.7 0.07 1.5E-06 49.6 9.4 79 194-274 13-103 (313)
289 PRK08643 acetoin reductase; Va 95.7 0.059 1.3E-06 48.3 8.7 78 195-274 2-89 (256)
290 TIGR02355 moeB molybdopterin s 95.7 0.081 1.7E-06 47.2 9.3 35 194-228 23-57 (240)
291 PRK06138 short chain dehydroge 95.7 0.054 1.2E-06 48.3 8.4 79 194-274 4-91 (252)
292 COG2226 UbiE Methylase involve 95.7 0.16 3.4E-06 45.1 10.9 102 188-298 45-158 (238)
293 PRK07063 short chain dehydroge 95.7 0.064 1.4E-06 48.2 8.9 79 194-274 6-96 (260)
294 PRK05884 short chain dehydroge 95.7 0.088 1.9E-06 46.3 9.5 74 197-273 2-78 (223)
295 PRK07677 short chain dehydroge 95.7 0.064 1.4E-06 48.0 8.8 78 195-274 1-88 (252)
296 COG0373 HemA Glutamyl-tRNA red 95.7 0.047 1E-06 52.1 8.1 96 193-298 176-276 (414)
297 COG2264 PrmA Ribosomal protein 95.7 0.086 1.9E-06 48.1 9.4 130 157-299 129-266 (300)
298 PRK07533 enoyl-(acyl carrier p 95.7 0.085 1.9E-06 47.5 9.6 102 194-298 9-150 (258)
299 PRK12937 short chain dehydroge 95.7 0.19 4.1E-06 44.6 11.8 102 194-298 4-141 (245)
300 PRK09242 tropinone reductase; 95.7 0.067 1.5E-06 48.0 8.9 79 194-274 8-98 (257)
301 PRK07856 short chain dehydroge 95.7 0.051 1.1E-06 48.6 8.1 75 194-274 5-85 (252)
302 PRK07035 short chain dehydroge 95.6 0.067 1.5E-06 47.8 8.7 78 194-273 7-94 (252)
303 PRK07985 oxidoreductase; Provi 95.6 0.15 3.3E-06 46.9 11.2 102 194-298 48-187 (294)
304 PLN02781 Probable caffeoyl-CoA 95.6 0.096 2.1E-06 46.5 9.5 104 188-295 62-177 (234)
305 PRK06914 short chain dehydroge 95.6 0.076 1.6E-06 48.3 9.1 77 195-274 3-91 (280)
306 PRK07453 protochlorophyllide o 95.6 0.074 1.6E-06 49.6 9.2 78 194-273 5-92 (322)
307 PRK06940 short chain dehydroge 95.6 0.18 3.9E-06 45.9 11.5 100 195-298 2-127 (275)
308 PLN02253 xanthoxin dehydrogena 95.6 0.063 1.4E-06 48.9 8.5 79 194-274 17-104 (280)
309 PRK10538 malonic semialdehyde 95.6 0.076 1.7E-06 47.4 8.9 76 197-274 2-84 (248)
310 PRK05717 oxidoreductase; Valid 95.6 0.074 1.6E-06 47.7 8.9 79 194-274 9-94 (255)
311 PRK06181 short chain dehydroge 95.6 0.073 1.6E-06 47.9 8.8 78 195-274 1-88 (263)
312 PRK06197 short chain dehydroge 95.6 0.08 1.7E-06 49.0 9.2 79 194-274 15-105 (306)
313 PRK08594 enoyl-(acyl carrier p 95.6 0.15 3.3E-06 45.9 10.8 103 194-299 6-150 (257)
314 TIGR00507 aroE shikimate 5-deh 95.5 0.082 1.8E-06 48.1 9.0 92 192-296 114-214 (270)
315 PF03446 NAD_binding_2: NAD bi 95.5 0.26 5.7E-06 41.0 11.4 88 196-297 2-95 (163)
316 KOG1201 Hydroxysteroid 17-beta 95.5 0.055 1.2E-06 48.9 7.5 80 193-274 36-124 (300)
317 PRK13255 thiopurine S-methyltr 95.5 0.14 3.1E-06 44.9 10.1 101 191-296 34-155 (218)
318 PRK15116 sulfur acceptor prote 95.5 0.21 4.6E-06 45.2 11.4 102 194-297 29-154 (268)
319 PF01596 Methyltransf_3: O-met 95.5 0.029 6.4E-07 48.6 5.7 101 192-296 43-155 (205)
320 PRK06114 short chain dehydroge 95.5 0.079 1.7E-06 47.5 8.8 79 194-274 7-96 (254)
321 PRK05690 molybdopterin biosynt 95.5 0.12 2.5E-06 46.4 9.7 35 194-228 31-65 (245)
322 PRK12826 3-ketoacyl-(acyl-carr 95.5 0.072 1.6E-06 47.4 8.5 79 194-274 5-93 (251)
323 PRK07577 short chain dehydroge 95.5 0.064 1.4E-06 47.3 8.1 74 194-274 2-78 (234)
324 PRK06398 aldose dehydrogenase; 95.5 0.046 9.9E-07 49.3 7.2 74 194-274 5-82 (258)
325 PRK08219 short chain dehydroge 95.5 0.15 3.2E-06 44.6 10.3 75 195-274 3-81 (227)
326 PRK08644 thiamine biosynthesis 95.5 0.11 2.3E-06 45.5 9.2 35 194-228 27-61 (212)
327 PRK12475 thiamine/molybdopteri 95.5 0.093 2E-06 49.3 9.4 36 194-229 23-58 (338)
328 PRK07688 thiamine/molybdopteri 95.5 0.087 1.9E-06 49.6 9.2 35 194-228 23-57 (339)
329 PRK08226 short chain dehydroge 95.5 0.079 1.7E-06 47.7 8.8 79 194-274 5-92 (263)
330 PRK07074 short chain dehydroge 95.5 0.089 1.9E-06 47.2 9.1 78 195-274 2-87 (257)
331 PRK08251 short chain dehydroge 95.5 0.091 2E-06 46.8 9.1 77 195-273 2-90 (248)
332 PRK12548 shikimate 5-dehydroge 95.5 0.089 1.9E-06 48.4 9.1 36 194-229 125-160 (289)
333 PRK05875 short chain dehydroge 95.5 0.084 1.8E-06 47.9 9.0 78 194-273 6-95 (276)
334 PRK06125 short chain dehydroge 95.5 0.07 1.5E-06 48.0 8.4 77 194-274 6-91 (259)
335 PRK01683 trans-aconitate 2-met 95.5 0.17 3.8E-06 45.5 10.9 99 187-295 24-129 (258)
336 PRK12429 3-hydroxybutyrate deh 95.5 0.069 1.5E-06 47.8 8.3 79 194-274 3-91 (258)
337 PRK08264 short chain dehydroge 95.5 0.063 1.4E-06 47.5 7.9 75 194-274 5-83 (238)
338 PRK08993 2-deoxy-D-gluconate 3 95.5 0.084 1.8E-06 47.3 8.7 79 194-274 9-95 (253)
339 PRK08340 glucose-1-dehydrogena 95.5 0.088 1.9E-06 47.3 8.9 76 197-274 2-86 (259)
340 PF00899 ThiF: ThiF family; I 95.4 0.065 1.4E-06 43.1 7.2 34 195-228 2-35 (135)
341 cd01483 E1_enzyme_family Super 95.4 0.14 3E-06 41.6 9.2 32 197-228 1-32 (143)
342 PF03435 Saccharop_dh: Sacchar 95.4 0.1 2.2E-06 50.2 9.7 90 198-294 1-96 (386)
343 COG3288 PntA NAD/NADP transhyd 95.4 0.14 3.1E-06 46.3 9.7 131 189-321 158-308 (356)
344 PRK07067 sorbitol dehydrogenas 95.4 0.09 2E-06 47.2 8.9 79 194-274 5-90 (257)
345 cd01078 NAD_bind_H4MPT_DH NADP 95.4 0.14 3E-06 44.0 9.6 76 194-276 27-109 (194)
346 PRK06603 enoyl-(acyl carrier p 95.4 0.094 2E-06 47.3 8.9 78 194-273 7-95 (260)
347 PRK06124 gluconate 5-dehydroge 95.4 0.099 2.1E-06 46.8 9.0 79 194-274 10-98 (256)
348 PRK01581 speE spermidine synth 95.4 0.25 5.4E-06 46.5 11.6 102 193-297 149-269 (374)
349 PRK06720 hypothetical protein; 95.4 0.12 2.6E-06 43.4 8.8 79 194-274 15-103 (169)
350 PF08704 GCD14: tRNA methyltra 95.4 0.037 8.1E-07 49.3 5.9 106 186-297 32-147 (247)
351 PRK06077 fabG 3-ketoacyl-(acyl 95.3 0.24 5.3E-06 44.0 11.4 102 195-299 6-143 (252)
352 PF02558 ApbA: Ketopantoate re 95.3 0.012 2.6E-07 48.3 2.6 95 198-297 1-102 (151)
353 PRK06101 short chain dehydroge 95.3 0.15 3.2E-06 45.3 9.8 75 196-273 2-80 (240)
354 PRK08277 D-mannonate oxidoredu 95.3 0.099 2.1E-06 47.6 8.8 78 194-273 9-96 (278)
355 PRK08085 gluconate 5-dehydroge 95.3 0.11 2.4E-06 46.4 9.1 79 194-274 8-96 (254)
356 PRK12769 putative oxidoreducta 95.3 0.075 1.6E-06 54.8 8.8 76 193-274 325-422 (654)
357 KOG1014 17 beta-hydroxysteroid 95.3 0.15 3.2E-06 46.4 9.4 79 193-274 47-136 (312)
358 COG0421 SpeE Spermidine syntha 95.3 0.25 5.4E-06 45.1 11.1 97 196-295 78-189 (282)
359 cd00755 YgdL_like Family of ac 95.3 0.2 4.4E-06 44.3 10.3 91 195-287 11-125 (231)
360 TIGR01963 PHB_DH 3-hydroxybuty 95.3 0.097 2.1E-06 46.7 8.6 78 195-274 1-88 (255)
361 PRK12384 sorbitol-6-phosphate 95.3 0.096 2.1E-06 47.0 8.5 78 195-274 2-91 (259)
362 COG2910 Putative NADH-flavin r 95.3 0.12 2.6E-06 43.3 8.1 93 197-299 2-107 (211)
363 PRK08415 enoyl-(acyl carrier p 95.3 0.11 2.5E-06 47.3 9.0 102 194-298 4-145 (274)
364 PRK14192 bifunctional 5,10-met 95.3 0.11 2.4E-06 47.4 8.8 76 193-298 157-233 (283)
365 PRK07574 formate dehydrogenase 95.2 0.16 3.5E-06 48.5 10.2 46 194-240 191-236 (385)
366 TIGR03206 benzo_BadH 2-hydroxy 95.2 0.11 2.3E-06 46.3 8.7 78 194-273 2-89 (250)
367 PF02254 TrkA_N: TrkA-N domain 95.2 0.27 5.8E-06 38.2 10.0 74 198-276 1-74 (116)
368 PRK06484 short chain dehydroge 95.2 0.084 1.8E-06 52.8 8.7 79 194-274 4-89 (520)
369 PRK08220 2,3-dihydroxybenzoate 95.2 0.21 4.5E-06 44.5 10.5 74 194-274 7-86 (252)
370 PRK06935 2-deoxy-D-gluconate 3 95.2 0.11 2.5E-06 46.5 8.8 79 194-274 14-101 (258)
371 PRK12936 3-ketoacyl-(acyl-carr 95.2 0.12 2.6E-06 45.8 8.9 79 194-274 5-90 (245)
372 PRK07791 short chain dehydroge 95.2 0.13 2.8E-06 47.1 9.1 80 193-274 4-102 (286)
373 PRK07666 fabG 3-ketoacyl-(acyl 95.2 0.12 2.6E-06 45.7 8.7 79 194-274 6-94 (239)
374 TIGR02354 thiF_fam2 thiamine b 95.1 0.084 1.8E-06 45.7 7.3 35 194-228 20-54 (200)
375 PRK14103 trans-aconitate 2-met 95.1 0.3 6.4E-06 44.0 11.2 97 186-295 21-125 (255)
376 COG2230 Cfa Cyclopropane fatty 95.1 0.092 2E-06 47.5 7.6 104 182-300 60-180 (283)
377 PLN03139 formate dehydrogenase 95.1 0.18 4E-06 48.1 10.0 46 194-240 198-243 (386)
378 cd00757 ThiF_MoeB_HesA_family 95.1 0.19 4.2E-06 44.4 9.6 34 195-228 21-54 (228)
379 PRK07984 enoyl-(acyl carrier p 95.1 0.12 2.6E-06 46.7 8.5 78 194-273 5-93 (262)
380 PRK06523 short chain dehydroge 95.0 0.099 2.1E-06 46.9 7.9 75 194-273 8-86 (260)
381 PRK00536 speE spermidine synth 95.0 0.081 1.8E-06 47.6 7.1 99 195-297 73-172 (262)
382 PRK08328 hypothetical protein; 95.0 0.12 2.5E-06 45.9 8.0 35 194-228 26-60 (231)
383 cd01065 NAD_bind_Shikimate_DH 95.0 0.12 2.6E-06 42.5 7.7 74 193-275 17-92 (155)
384 PRK08690 enoyl-(acyl carrier p 95.0 0.14 3E-06 46.2 8.7 79 194-274 5-94 (261)
385 TIGR00477 tehB tellurite resis 94.9 0.11 2.4E-06 44.7 7.6 98 188-296 24-133 (195)
386 COG0031 CysK Cysteine synthase 94.9 0.35 7.5E-06 44.2 10.9 61 187-247 54-116 (300)
387 COG0569 TrkA K+ transport syst 94.9 0.21 4.6E-06 44.0 9.5 83 197-285 2-86 (225)
388 PRK08303 short chain dehydroge 94.9 0.15 3.3E-06 47.3 9.0 34 194-228 7-41 (305)
389 cd01487 E1_ThiF_like E1_ThiF_l 94.9 0.16 3.4E-06 42.9 8.3 33 197-229 1-33 (174)
390 PRK00312 pcm protein-L-isoaspa 94.9 0.086 1.9E-06 46.0 6.9 97 187-295 71-174 (212)
391 PRK08278 short chain dehydroge 94.9 0.13 2.8E-06 46.8 8.3 79 194-274 5-100 (273)
392 PRK14191 bifunctional 5,10-met 94.9 0.17 3.7E-06 46.0 8.9 95 173-298 135-231 (285)
393 PRK08762 molybdopterin biosynt 94.9 0.13 2.8E-06 49.2 8.6 35 194-228 134-168 (376)
394 PRK07417 arogenate dehydrogena 94.9 0.25 5.4E-06 45.2 10.2 88 197-297 2-92 (279)
395 cd01492 Aos1_SUMO Ubiquitin ac 94.9 0.21 4.6E-06 43.1 9.1 94 194-291 20-136 (197)
396 PLN02589 caffeoyl-CoA O-methyl 94.9 0.26 5.7E-06 44.0 9.9 101 190-294 75-188 (247)
397 COG0334 GdhA Glutamate dehydro 94.9 0.11 2.3E-06 49.3 7.7 37 193-230 205-241 (411)
398 PRK13243 glyoxylate reductase; 94.9 0.21 4.5E-06 47.0 9.7 37 194-231 149-185 (333)
399 PRK08945 putative oxoacyl-(acy 94.9 0.13 2.9E-06 45.7 8.2 82 192-274 9-102 (247)
400 PRK05650 short chain dehydroge 94.8 0.15 3.2E-06 46.2 8.5 76 197-274 2-87 (270)
401 TIGR00417 speE spermidine synt 94.8 0.26 5.7E-06 44.8 10.0 100 194-296 72-186 (270)
402 PRK06113 7-alpha-hydroxysteroi 94.8 0.17 3.6E-06 45.4 8.7 79 194-274 10-98 (255)
403 PRK07097 gluconate 5-dehydroge 94.8 0.19 4E-06 45.4 9.0 79 194-274 9-97 (265)
404 PRK08159 enoyl-(acyl carrier p 94.8 0.2 4.4E-06 45.5 9.2 80 192-273 7-97 (272)
405 PRK12743 oxidoreductase; Provi 94.8 0.17 3.7E-06 45.4 8.7 78 195-274 2-90 (256)
406 PRK07102 short chain dehydroge 94.8 0.26 5.6E-06 43.7 9.8 76 196-274 2-86 (243)
407 PLN02657 3,8-divinyl protochlo 94.8 0.31 6.8E-06 46.9 10.9 81 191-274 56-146 (390)
408 PRK15469 ghrA bifunctional gly 94.7 0.25 5.3E-06 46.0 9.7 36 194-230 135-170 (312)
409 PLN02244 tocopherol O-methyltr 94.7 0.098 2.1E-06 49.3 7.1 95 193-297 117-224 (340)
410 PRK05597 molybdopterin biosynt 94.7 0.2 4.4E-06 47.4 9.2 36 194-229 27-62 (355)
411 PRK12938 acetyacetyl-CoA reduc 94.7 0.13 2.8E-06 45.8 7.6 79 194-274 2-91 (246)
412 PLN00141 Tic62-NAD(P)-related 94.6 0.2 4.3E-06 44.9 8.8 100 194-298 16-133 (251)
413 PRK06171 sorbitol-6-phosphate 94.6 0.11 2.5E-06 46.8 7.2 76 194-274 8-87 (266)
414 PRK12746 short chain dehydroge 94.6 0.47 1E-05 42.3 11.2 79 194-274 5-100 (254)
415 PRK12747 short chain dehydroge 94.6 0.6 1.3E-05 41.6 11.8 104 194-299 3-147 (252)
416 KOG1252 Cystathionine beta-syn 94.6 0.23 5E-06 45.6 8.8 57 187-244 95-155 (362)
417 PRK05562 precorrin-2 dehydroge 94.6 1.9 4.2E-05 37.8 14.3 92 194-297 24-117 (223)
418 PRK08618 ornithine cyclodeamin 94.6 0.47 1E-05 44.4 11.3 94 193-299 125-224 (325)
419 TIGR02622 CDP_4_6_dhtase CDP-g 94.6 0.09 2E-06 49.7 6.6 75 194-274 3-85 (349)
420 KOG1207 Diacetyl reductase/L-x 94.5 0.16 3.4E-06 42.2 6.8 46 194-240 6-52 (245)
421 PLN02823 spermine synthase 94.5 0.37 8.1E-06 45.2 10.4 99 194-295 103-219 (336)
422 PRK05557 fabG 3-ketoacyl-(acyl 94.5 0.23 5E-06 43.9 8.8 79 194-274 4-93 (248)
423 PRK07424 bifunctional sterol d 94.5 0.23 4.9E-06 47.9 9.1 74 194-274 177-255 (406)
424 PRK07370 enoyl-(acyl carrier p 94.5 0.17 3.7E-06 45.5 8.0 102 194-298 5-149 (258)
425 PRK08063 enoyl-(acyl carrier p 94.5 0.19 4.2E-06 44.7 8.2 79 194-274 3-92 (250)
426 PLN00203 glutamyl-tRNA reducta 94.5 0.19 4E-06 50.0 8.6 72 195-275 266-340 (519)
427 COG2227 UbiG 2-polyprenyl-3-me 94.4 0.41 8.9E-06 42.1 9.7 95 193-295 58-160 (243)
428 PF03807 F420_oxidored: NADP o 94.4 0.76 1.7E-05 34.2 10.2 75 197-284 1-80 (96)
429 PLN03075 nicotianamine synthas 94.4 0.19 4.1E-06 46.0 7.9 97 194-295 123-232 (296)
430 PRK09135 pteridine reductase; 94.4 0.26 5.7E-06 43.7 9.0 78 194-273 5-94 (249)
431 PRK07792 fabG 3-ketoacyl-(acyl 94.4 0.29 6.3E-06 45.3 9.5 79 194-274 11-99 (306)
432 TIGR02415 23BDH acetoin reduct 94.4 0.22 4.8E-06 44.4 8.5 77 196-274 1-87 (254)
433 PRK08223 hypothetical protein; 94.4 0.21 4.6E-06 45.5 8.2 35 194-228 26-60 (287)
434 PLN02730 enoyl-[acyl-carrier-p 94.4 0.68 1.5E-05 42.9 11.7 36 194-231 8-46 (303)
435 PRK08287 cobalt-precorrin-6Y C 94.4 0.49 1.1E-05 40.3 10.1 98 187-295 24-130 (187)
436 TIGR00563 rsmB ribosomal RNA s 94.3 0.3 6.5E-06 47.6 9.7 103 188-297 232-369 (426)
437 PRK10669 putative cation:proto 94.3 0.3 6.4E-06 49.4 10.0 76 196-276 418-493 (558)
438 PTZ00098 phosphoethanolamine N 94.3 0.37 7.9E-06 43.7 9.6 103 186-297 44-157 (263)
439 PLN02520 bifunctional 3-dehydr 94.3 0.16 3.6E-06 50.8 8.0 71 194-274 378-449 (529)
440 PRK05565 fabG 3-ketoacyl-(acyl 94.3 0.25 5.5E-06 43.7 8.5 78 195-274 5-93 (247)
441 PRK07411 hypothetical protein; 94.3 0.26 5.6E-06 47.4 9.0 35 194-228 37-71 (390)
442 COG1648 CysG Siroheme synthase 94.3 1.4 3E-05 38.4 12.7 94 194-299 11-106 (210)
443 PRK05600 thiamine biosynthesis 94.3 0.32 6.8E-06 46.4 9.5 35 194-228 40-74 (370)
444 PRK03562 glutathione-regulated 94.3 0.29 6.3E-06 50.1 9.8 77 195-276 400-476 (621)
445 KOG4022 Dihydropteridine reduc 94.2 0.61 1.3E-05 38.3 9.5 97 195-298 3-131 (236)
446 PRK10258 biotin biosynthesis p 94.2 0.39 8.5E-06 43.0 9.7 99 188-297 36-141 (251)
447 PRK14188 bifunctional 5,10-met 94.2 0.32 6.9E-06 44.6 9.0 94 173-298 136-232 (296)
448 COG1179 Dinucleotide-utilizing 94.2 0.63 1.4E-05 40.9 10.2 34 194-227 29-62 (263)
449 PLN02986 cinnamyl-alcohol dehy 94.2 0.29 6.3E-06 45.5 9.1 37 194-231 4-41 (322)
450 PF10727 Rossmann-like: Rossma 94.2 0.21 4.6E-06 39.7 6.9 79 195-287 10-90 (127)
451 PF13823 ADH_N_assoc: Alcohol 94.2 0.055 1.2E-06 28.8 2.4 22 10-32 1-22 (23)
452 PRK04266 fibrillarin; Provisio 94.2 0.85 1.8E-05 40.3 11.4 102 188-295 66-175 (226)
453 PRK14194 bifunctional 5,10-met 94.1 0.31 6.7E-06 44.7 8.7 95 173-298 137-233 (301)
454 PRK07775 short chain dehydroge 94.1 0.51 1.1E-05 42.8 10.3 79 194-274 9-97 (274)
455 PLN02233 ubiquinone biosynthes 94.1 0.53 1.2E-05 42.6 10.3 101 188-297 67-183 (261)
456 TIGR01532 E4PD_g-proteo D-eryt 94.1 0.52 1.1E-05 44.0 10.2 99 197-299 1-123 (325)
457 PRK08416 7-alpha-hydroxysteroi 94.1 0.31 6.8E-06 43.8 8.7 78 194-273 7-96 (260)
458 TIGR02632 RhaD_aldol-ADH rhamn 94.0 0.24 5.3E-06 51.2 8.9 79 194-274 413-503 (676)
459 PRK12825 fabG 3-ketoacyl-(acyl 94.0 0.31 6.7E-06 43.1 8.6 78 194-273 5-93 (249)
460 PLN02928 oxidoreductase family 94.0 0.37 8.1E-06 45.5 9.4 36 193-229 157-192 (347)
461 PRK12745 3-ketoacyl-(acyl-carr 94.0 0.29 6.2E-06 43.7 8.4 77 196-274 3-90 (256)
462 PRK08300 acetaldehyde dehydrog 94.0 0.6 1.3E-05 42.9 10.3 93 196-297 5-101 (302)
463 PRK06522 2-dehydropantoate 2-r 94.0 0.74 1.6E-05 42.4 11.3 92 197-295 2-99 (304)
464 PLN00016 RNA-binding protein; 93.9 0.57 1.2E-05 44.8 10.7 95 195-297 52-165 (378)
465 TIGR03215 ac_ald_DH_ac acetald 93.9 0.53 1.1E-05 43.0 9.8 89 197-297 3-95 (285)
466 PRK05855 short chain dehydroge 93.9 0.26 5.7E-06 49.8 8.8 79 194-274 314-402 (582)
467 PRK06849 hypothetical protein; 93.9 0.52 1.1E-05 45.3 10.4 92 194-287 3-99 (389)
468 PRK00121 trmB tRNA (guanine-N( 93.9 1.1 2.4E-05 38.8 11.4 95 194-295 40-155 (202)
469 cd05211 NAD_bind_Glu_Leu_Phe_V 93.9 0.2 4.4E-06 43.9 6.8 47 193-239 21-77 (217)
470 TIGR01505 tartro_sem_red 2-hyd 93.9 0.59 1.3E-05 42.9 10.3 43 197-240 1-43 (291)
471 PF13659 Methyltransf_26: Meth 93.9 0.48 1E-05 36.6 8.4 96 195-295 1-114 (117)
472 PLN02490 MPBQ/MSBQ methyltrans 93.8 0.45 9.8E-06 44.6 9.5 99 193-297 112-216 (340)
473 PF08659 KR: KR domain; Inter 93.8 0.34 7.5E-06 41.1 8.1 77 197-274 2-91 (181)
474 PRK07889 enoyl-(acyl carrier p 93.8 0.29 6.3E-06 44.0 8.0 79 194-274 6-95 (256)
475 PRK08642 fabG 3-ketoacyl-(acyl 93.8 0.45 9.8E-06 42.3 9.3 78 194-273 4-90 (253)
476 PRK08936 glucose-1-dehydrogena 93.8 0.39 8.5E-06 43.1 8.8 79 194-274 6-95 (261)
477 TIGR00452 methyltransferase, p 93.8 0.77 1.7E-05 42.7 10.8 101 183-295 110-224 (314)
478 PRK03659 glutathione-regulated 93.8 0.42 9E-06 48.8 9.8 93 196-294 401-496 (601)
479 PF02670 DXP_reductoisom: 1-de 93.7 0.82 1.8E-05 36.4 9.4 86 198-287 1-113 (129)
480 PRK14189 bifunctional 5,10-met 93.7 0.39 8.4E-06 43.7 8.5 94 174-298 137-232 (285)
481 PRK01438 murD UDP-N-acetylmura 93.7 0.42 9.2E-06 47.3 9.7 69 194-274 15-88 (480)
482 PRK00216 ubiE ubiquinone/menaq 93.7 0.65 1.4E-05 40.9 10.1 100 189-297 46-159 (239)
483 PRK11036 putative S-adenosyl-L 93.7 0.75 1.6E-05 41.4 10.4 93 193-295 43-148 (255)
484 PRK09134 short chain dehydroge 93.7 0.39 8.5E-06 43.0 8.7 79 194-274 8-97 (258)
485 PRK06997 enoyl-(acyl carrier p 93.6 0.41 9E-06 43.1 8.7 79 194-274 5-94 (260)
486 TIGR01289 LPOR light-dependent 93.6 0.45 9.8E-06 44.3 9.2 78 195-274 3-91 (314)
487 TIGR00138 gidB 16S rRNA methyl 93.6 0.58 1.3E-05 39.7 9.1 92 194-295 42-141 (181)
488 TIGR01829 AcAcCoA_reduct aceto 93.6 0.42 9.2E-06 42.1 8.7 77 196-274 1-88 (242)
489 PRK05708 2-dehydropantoate 2-r 93.6 0.44 9.5E-06 44.2 9.0 97 196-296 3-104 (305)
490 PRK11559 garR tartronate semia 93.6 0.78 1.7E-05 42.2 10.7 44 196-240 3-46 (296)
491 PRK12480 D-lactate dehydrogena 93.6 0.82 1.8E-05 42.9 10.8 37 194-231 145-181 (330)
492 PRK07878 molybdopterin biosynt 93.6 0.4 8.7E-06 46.1 8.9 35 194-228 41-75 (392)
493 PRK10792 bifunctional 5,10-met 93.6 0.44 9.6E-06 43.3 8.6 94 174-298 138-233 (285)
494 TIGR03649 ergot_EASG ergot alk 93.5 0.51 1.1E-05 43.0 9.3 96 197-297 1-105 (285)
495 PF05368 NmrA: NmrA-like famil 93.5 0.46 9.9E-06 42.0 8.7 70 198-273 1-73 (233)
496 PRK06947 glucose-1-dehydrogena 93.5 0.36 7.8E-06 42.9 8.0 77 196-274 3-90 (248)
497 TIGR02752 MenG_heptapren 2-hep 93.5 0.32 7E-06 42.9 7.6 102 187-297 38-152 (231)
498 PF01408 GFO_IDH_MocA: Oxidore 93.5 1.6 3.5E-05 33.8 10.9 88 197-297 2-93 (120)
499 PF08241 Methyltransf_11: Meth 93.5 0.32 7E-06 35.7 6.5 84 201-294 3-95 (95)
500 KOG1502 Flavonol reductase/cin 93.4 0.55 1.2E-05 43.4 9.0 74 194-274 5-88 (327)
No 1
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.7e-69 Score=470.21 Aligned_cols=374 Identities=74% Similarity=1.264 Sum_probs=361.8
Q ss_pred CCccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCC
Q 017000 4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
..++.++||.+.+++++||.++|++.++|+.+||+||+.++++|++|...++|..+...+|.++|||.+|+|+++|..|+
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 35678999999999999999999999999999999999999999999999999987788999999999999999999999
Q ss_pred ccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEec
Q 017000 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 163 (379)
++++||+|+......|+.|.+|+++..|+|...+....-+..++||+++|.-+|+.+||+++.-+|+||.+++...+++|
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEec
Confidence 99999999999999999999999999999999999888888878999999999999999999999999999999999999
Q ss_pred CCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE
Q 017000 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
+++.+++.+++|.|.++|+|.|.++.++++||++|.|.|.|++|++++|-|++.|+.+||++|.+++|.+.++++|++++
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~ 241 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEF 241 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecC
Q 017000 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG 323 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~ 323 (379)
+|+.+.....++.+++.|++|+|+-|||+|+.+++++++.+..++||+-|.+|....+..+++.++.++.+++|.|+.++
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG 321 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG 321 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence 99986555799999999999999999999999999999999999999999999998889999999999999999999999
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
.++.+.+++.+++...++++.+.++|++++||++|++||+.|.+++..|.||.+
T Consensus 322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999999999998864
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.9e-69 Score=477.14 Aligned_cols=366 Identities=62% Similarity=1.074 Sum_probs=352.6
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
+++||.+..++++|++++|+++++|++|||+||+.|+|+||+|..+++|..|.. +|.++|||++|+|++||+.|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 357999999999999999999999999999999999999999999999998888 9999999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|+......|+.|.+|+++++|+|.......+-|.. .+|+++++.+|.+.+|+++.++|++|..+++..++|++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999999988888866 99999999999999999999999999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+++.++++.|..+|.+.++++.+++++|++|.|.|.|++|++++|-|+..|+.+||+++.+++|++++++||+++++|..
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCc
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+. .+..+.+.++|++|+|++|||+|+...+++++.++.+ +|+.+.+|.......++++++.+..+++|+|++++....
T Consensus 239 ~~-~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 EV-DDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred hh-hhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 72 2699999999999999999999999999999999999 599999999888888999999999999999999999888
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
+.++++++++..+|+|++.+++++.++|+|||+||+.+.+++..|.||++
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 89999999999999999999999999999999999999999999888875
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.3e-66 Score=471.58 Aligned_cols=335 Identities=34% Similarity=0.516 Sum_probs=305.5
Q ss_pred cccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
+++|||+++.++++|+++.|++.|+|+++||+|+|.|+|+|++|++.++|.++...+|.+||||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEee-cCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC
Q 017000 87 PGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 87 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
+||||.+ +...+|+.|.||+++++++|++... .|++ .+| +|+||+++|+.++++||+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TDG------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---ccee-ecC------------------cceeEEEEchHHeEECCC
Confidence 9999998 8999999999999999999999664 4555 555 999999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++||.+.|+..|+|++| ++.+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999996 55899999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCC
Q 017000 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGG 324 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~ 324 (379)
.++ .+..+.+++. +|++||+++ +.+++.+++.|+++ |+++++|.........++.+.++ +++++.|+..++
T Consensus 217 ~~~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 217 SSD--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred cCC--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 775 6777777664 999999999 79999999999997 99999999742233445556444 499999999885
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
+.+.++++++..++++++. +.+.++++|+++||+.|.+++.. |+||.+.
T Consensus 289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 4799999999999999965 44799999999999999999987 9999875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-60 Score=418.45 Aligned_cols=342 Identities=27% Similarity=0.413 Sum_probs=300.6
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCC---CCCcccccceeEEEEEeCCCCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~---~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
.+|+|+++.++++ +.+.++|.|++ .|+||+|++.++|||++|++.+....... +.|+++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4789999999999 99999999987 99999999999999999999998765443 5899999999999999999999
Q ss_pred ccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEec
Q 017000 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 163 (379)
++++||||++.|..+|..|++|++|.+|+|.+..+. +..+.+| ++++|++.++++++|+
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeC
Confidence 999999999999999999999999999999998863 3334566 9999999999999999
Q ss_pred CCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE
Q 017000 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
||+++++++|++. +++++||| .+++++++|++|||+|||++|+.++..|+++|+.+|++++..++|+++++++|++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999999987 69999998 588999999999999999999999999999999999999999999999999999987
Q ss_pred eCCCCCC--chHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEe
Q 017000 244 VNPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKG 319 (379)
Q Consensus 244 ~~~~~~~--~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~ 319 (379)
.+..... ..+.+.+...... .+|++|||+|....++.++..++.+ |++++.|+.. ...+|+..... +++.++|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~--~~~~fpi~~v~~kE~~~~g 295 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGA--EEIQFPIIDVALKEVDLRG 295 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCC--CccccChhhhhhheeeeee
Confidence 7655422 3444555554443 6999999999999999999999996 9999998854 35566655543 3888888
Q ss_pred eecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEecCC
Q 017000 320 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQD 379 (379)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~--~Kvvl~~~~ 379 (379)
++-+. ..+++..++++++|++.+.++|++.|+++++.+||+.+..++. .|++|..++
T Consensus 296 ~fry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 296 SFRYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 86432 2489999999999999999999999999999999999998884 499998754
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-59 Score=410.14 Aligned_cols=349 Identities=30% Similarity=0.463 Sum_probs=309.7
Q ss_pred CCCCCccccceeeeeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEe
Q 017000 1 MSTEGQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78 (379)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~v 78 (379)
|+++..|.+.+++.+..++. ++++.+++.|+++++||+|+|+|+|||++|++.+.|+++..++|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 77888899999999999998 5777999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCEE-eecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecC
Q 017000 79 GEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 79 G~~v~~~~~Gd~V-~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 157 (379)
|++|++|++|||| +-+...+|..|.+|+++++++|++... .+.|+. +|| ..++|+|++|+++++
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~~-~DG-------------t~~~ggf~~~~~v~~ 145 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGVY-HDG-------------TITQGGFQEYAVVDE 145 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeE-eccccc-cCC-------------CCccCccceeEEEee
Confidence 9999999999999 455678999999999999999996332 234555 666 455689999999999
Q ss_pred cceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh-hhHHHHH
Q 017000 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK 236 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~ 236 (379)
.++++||++++.+.||.+.|+..|.|.+| ...++.||++|-|.|+|++|.+++|+|++||. +|++++++. +|.+.++
T Consensus 146 ~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 146 VFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIK 223 (360)
T ss_pred eeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHH
Confidence 99999999999999999999999999985 66788999999999997799999999999999 999999987 6777888
Q ss_pred hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-cc
Q 017000 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GR 315 (379)
Q Consensus 237 ~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~ 315 (379)
.||++.+++..+ +.++.+.+...+++++|-|.+. ....+..++.+++.+ |++|++|.+.. ++.++.+++.. .+
T Consensus 224 ~LGAd~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~ 297 (360)
T KOG0023|consen 224 SLGADVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRK 297 (360)
T ss_pred hcCcceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccE
Confidence 899999998873 3899999999988888888876 335689999999996 99999999754 66666666655 88
Q ss_pred EEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 316 VWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 316 ~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
+|.|+..++. .+.++++++..++.++.. .+..+++++++||+++++++.. |.||.++
T Consensus 298 ~I~GS~vG~~---ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 298 SIKGSIVGSR---KETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred EEEeeccccH---HHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 9999988854 689999999999999965 5888999999999999999987 9999864
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.3e-56 Score=427.11 Aligned_cols=374 Identities=54% Similarity=1.032 Sum_probs=310.3
Q ss_pred CCccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCC
Q 017000 4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 4 ~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v 82 (379)
++++++|||+++.++++++.++++|.|+|+++||+|||.+++||++|++.+.|..+. ..+|.++|||++|+|+++|+++
T Consensus 5 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 5 QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCC
Confidence 346789999999999988999999999999999999999999999999999887542 3578999999999999999999
Q ss_pred CccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCcccccc--CCCcccccCCccceeeeEEecCcce
Q 017000 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSV 160 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~v~~~~~ 160 (379)
+++++||||++.+..+|+.|.+|.+++++.|.+....+..+..+.+|...+.. .+....+....|+|+||+.+|.+.+
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 99999999999999999999999999999999865321100000011000000 0111122233579999999999999
Q ss_pred EecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+++|+++++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 99999999999999999999999988888899999999999999999999999999999679999999999999999999
Q ss_pred ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEee
Q 017000 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGT 320 (379)
Q Consensus 241 ~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~ 320 (379)
++++++.+.+.++.+.+++++.+++|++||++|.+..+..++.++++++|+++.+|.......+++.+..+++++++.|+
T Consensus 245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~ 324 (381)
T PLN02740 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS 324 (381)
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEE
Confidence 99998765223577888888766899999999998889999999988339999999864333344544444457888888
Q ss_pred ecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 321 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
..+.+....+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 776654446789999999999999888899999999999999999988877999874
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=4.4e-56 Score=423.30 Aligned_cols=367 Identities=66% Similarity=1.154 Sum_probs=305.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++..++++++++++|.|+|.++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|++++++++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 79999999888899999999999999999999999999999999988765556799999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
||++.+..+|+.|.+|..+++++|.+.....++|.. .+|...+...|...++..+.|+|+||+.+|.+.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999999999999999999999999976533333332 2221111111211122223479999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|+++++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998788899999999999999999999999999999779999999999999999999999987643
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCccc
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRS 329 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 329 (379)
..++.+.+++.+++++|++|||+|++..+..+++++++++|+++.+|.......+.+.+..++.+..+.++.++......
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 35577778888777899999999987889999999988339999999864333344444444444556676655433446
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 330 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 330 ~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
++++++++++++++++.++++++|+|+|+++|++.+.+++..|++|++
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 789999999999999888899999999999999999888777999975
No 8
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.6e-55 Score=419.79 Aligned_cols=367 Identities=78% Similarity=1.284 Sum_probs=308.6
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
+|||+++.+++++++++++|.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999998876655689999999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|++++++.|.+.....+.|.. .+|...+-.+|...+++.+.|+|+||+.++.+.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999876432222222 222111111233333444567999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++++++++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998878888999999999999999999999999999977999999999999999999999998876
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCcc
Q 017000 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 328 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (379)
.++++.+.+++.+++++|+||||+|+...+..+++++++++|+++.+|.......+.+.+..+..+..+.++..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 32368888888887799999999998778999999998834999999976432233444444444556677766655556
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
.+++++++++.++++++.++++++|+|+|+++|++.+.+++..|++|+
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 789999999999999988889999999999999999998887799985
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.8e-55 Score=418.46 Aligned_cols=369 Identities=65% Similarity=1.165 Sum_probs=311.6
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
++|||+++.+++++++++++|.|+|+++||+||+.+++||++|++.+.|..+...+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 37999999998888999999999999999999999999999999999887665577999999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||||++.+..+|+.|.+|..++++.|.........|....++...+...|...+++.+.|+|+||+.++++.++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999999999999999999999999986532222221111111122223333444456799999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++++++.+.++|+++++..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999989999999888888999999999999999999999999999987799999999999999999999999876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCc
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+.+..+.+.+++.+++++|++|||+|....+..++.++++++|+++.+|.......+++.+..+++++++.+++.+.+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 53245777788877668999999999888899999999992299999998654334555554455688999887766655
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
+.+++++++++.++++++.++++++|||+|+++|++.+++++..|++|.
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 5678999999999999988889999999999999999999988899874
No 10
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=6.1e-55 Score=416.19 Aligned_cols=360 Identities=42% Similarity=0.714 Sum_probs=301.2
Q ss_pred ceeeeeecCCC--------CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 017000 10 CKAAVAWEPNK--------PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (379)
Q Consensus 10 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 81 (379)
|||+++.++|. .++++++|.|+|.++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 79999998763 389999999999999999999999999999999988753 346899999999999999999
Q ss_pred CCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceE
Q 017000 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (379)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 161 (379)
++++++||||++.+..+|+.|.+|+.++++.|.........|.. .+|.-.+..++-...+..+.|+|+||+.+|++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876543222321 11100000000001112234699999999999999
Q ss_pred ecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc
Q 017000 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (379)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~ 241 (379)
++|+++++++|+.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++.+++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999989999999888888999999999999999999999999999996799999999999999999999
Q ss_pred eEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEee
Q 017000 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 320 (379)
Q Consensus 242 ~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~ 320 (379)
+++++.+ .++.+.+++.+.+++|++|||+|.+..+..++++++++ |+++.+|.......++++...++ +++++.++
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 9999876 67888888887778999999999888899999999996 99999997543233455554444 38899998
Q ss_pred ecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEE
Q 017000 321 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCV 374 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvv 374 (379)
+.+.+....++++++++++++++++.++++++|+|+|+++||+.+.+++..|.|
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~v 369 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV 369 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeee
Confidence 776554456789999999999999888899999999999999999999887444
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=4.3e-54 Score=408.56 Aligned_cols=355 Identities=37% Similarity=0.618 Sum_probs=300.4
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
+|||+++.++++|++++++|.|+|++++|+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 699999999998899999999999999999999999999999999888653 2478899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|.+++.++|....... ......+| .......+.|+|+||+.+|++.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~-~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNAT-QKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccc-cccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 99999999999999999999999998532110 00000001 0000011246999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++|+.+++.+.++|+++.+.+.+++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++.+
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988878888999999999999999999999999999966999999999999999999999998876
Q ss_pred CCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCC
Q 017000 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 326 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 326 (379)
.++.+.+++.+++ ++|++|||+|++..+..++.+++++ |+++.+|........++++..++ ++.++.+++.+...
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 6788888888887 8999999999878899999999996 99999998643333445544433 37888877654333
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
...++++++++++++++++.++++++||++|+++|++.+++++..|++|.
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 45678899999999999988889999999999999999999887788875
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=9e-54 Score=408.31 Aligned_cols=365 Identities=54% Similarity=1.020 Sum_probs=299.8
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
..|||+++.++++.++++++|.|+|+++||+|||.+++||++|++.+.+.. .+|.++|||++|+|+++|++++++++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 679999999988779999999999999999999999999999999887642 35789999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+..+|+.|.+|+++++++|.+.... ..|....++...+...|....++...|+|+||+.+|++.++++|+++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 99999999999999999999999999874210 00100000000000011111111124799999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++++.++|+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++.+++|+++++++|++++++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~ 246 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence 99999999888889998877778899999999999999999999999999996788888899999999999999999876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc--ceeeeccEEEeeecCCC
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP--FQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~ 325 (379)
+.+.++.+.+++++.+++|++||++|....+..+++.+++++|+++.+|..... ..+.. ..+.+++++.|+..+.+
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~~~ 324 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFGGW 324 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecCCC
Confidence 522467778888876689999999999777999999999933999999986432 22222 23345888988877655
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEecC
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 378 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~~ 378 (379)
....++.+++++++++++++.++++++|+|+|+++|++.+.+++..|+||++.
T Consensus 325 ~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 325 KPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred chhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 44567899999999999998878999999999999999999988889999875
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=3.4e-53 Score=403.29 Aligned_cols=365 Identities=62% Similarity=1.099 Sum_probs=306.0
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
+.|||+++.+.+++++++++|.|.+.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 3589999998888899999999999999999999999999999999988654 457899999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+..+|+.|.+|..+.+++|++.... ..|.. .++...+..+|...+++.+.|+|+||+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999999999999999999999999986532 11211 11111111223333334456799999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++.
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999887888999999999999999999999999999997799999999999999999999999876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCc
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+.+.++.+.+++.+.+++|++|||+|....+..+++++++++|+++.+|.... ...++++..++.++++.+++.+.+..
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~ 316 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKS 316 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCCh
Confidence 53345677777777678999999999878889999999873399999998542 23344454444478888887766554
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
..++++++++++++.+++.++++++|+++|+++|++.+.+++..|++|.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 317 RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 5678999999999999988889999999999999999998886699874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.3e-52 Score=395.86 Aligned_cols=337 Identities=28% Similarity=0.438 Sum_probs=290.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++. ++++++|.|+|.++||+||+.++++|++|++.+.+.... ...|.++|||++|+|+++|++++.+++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999998776 999999999999999999999999999999988776432 2357899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|+.++++.|.+... .+|.. .+ |+|+||+.+|.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987542 23322 33 4999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++|+++++++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999986 5678899999999999999999999999999955999999999999999999999999876
Q ss_pred CCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCc
Q 017000 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
.+ .+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.+++...
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 45 6677777777 8999999999987778999999996 99999997532 22222112223488888876543
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
..+++++++++.++++++.++++++|+++|+++|++.+.+++..|+||+|
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35789999999999999888999999999999999999887756999976
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-51 Score=387.11 Aligned_cols=336 Identities=21% Similarity=0.299 Sum_probs=277.8
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecccccccccc-CCCC--CCCCCcccccceeEEEEEeCCCCCc
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
..+|+++++++++ ++++++|.| +.++||||||.++|||++|++.+. |..+ ..++|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4689999999988 999999987 589999999999999999999875 3332 2357999999999999999 6889
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
+++||||++.+..+|+.|++|++++++.|.+... +|....+ ....|+|+||+.++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999997553 2321000 0012599999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++++++.. .++++||+++ ......+|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++
T Consensus 142 ~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99998776644 4778899986 445667899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 017000 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
++++ .++.+..+ . .+++|++|||+|.+..+..++++++++ |+++.+|.... ..++++..+ .+++++.++...
T Consensus 220 ~~~~--~~~~~~~~-~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 220 NPQN--DDLDHYKA-E-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred cCCc--ccHHHHhc-c-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec
Confidence 8876 44443322 1 236999999999977899999999996 99999997533 234444444 337888877532
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
..++++++++++++++++.++++++|+++|+++|++.+.+++.. |++|.+
T Consensus 293 ----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 36799999999999999888899999999999999999888764 999874
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=8e-51 Score=382.45 Aligned_cols=341 Identities=28% Similarity=0.387 Sum_probs=280.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCc-ccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|+++++..++....+.+.+.|.+.++||+|||.++|||++|++.+++..+..+.|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 57777777776344777877778899999999999999999999999877776666 99999999999999 77889999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCc--cceecCCCccccccCCCcccccCCccceeeeEEecCcceEec-CC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATG--AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-DP 165 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~--~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i-P~ 165 (379)
|||++.|..+|+.|.+|+.+.++.|.+...... ++.. .+| +|+||+.+|.+.++++ ||
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~-~~G------------------~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG-IDG------------------GFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCC-CCC------------------ceEEEEEeccccCeecCCC
Confidence 999999999999999999999999996543211 1111 344 9999999997655554 88
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEe
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~ 244 (379)
++ +.+++++..++.++|++........++++|+|+|+|++|++++++|+.+|+.+|++++.+++|++++++ .|++.++
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88 555555666899997764455556666699999999999999999999999999999999999999999 6666566
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeec
Q 017000 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~ 322 (379)
+..+ .+....+.+.+++ ++|++|||+|...++.+++++++++ |+++.+|....... .++...+ .+++++.|+..
T Consensus 220 ~~~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~ 295 (350)
T COG1063 220 NPSE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR 295 (350)
T ss_pred cCcc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC
Confidence 5554 3677788889988 9999999999999999999999996 99999999754332 3333333 34899998843
Q ss_pred CCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEec
Q 017000 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKM 377 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~--~Kvvl~~ 377 (379)
. ....+++.+++++++|++++.+++++.++++|+++||+.+.+++. .|++|++
T Consensus 296 ~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 296 P--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred C--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 2 233689999999999999999999999999999999999998654 4999874
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.2e-50 Score=387.57 Aligned_cols=346 Identities=24% Similarity=0.363 Sum_probs=273.5
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCC-------CCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCC
Q 017000 9 TCKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 81 (379)
-|||+++.++++ ++++++|.|+|. ++||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 489999999987 999999999874 68999999999999999999988643 346899999999999999999
Q ss_pred CCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCC---CccceecCCCccccccCCCcccccCCccceeeeEEecCc
Q 017000 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA---TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~---~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (379)
|+++++||||++.+..+|+.|.+|++++++.|.+.... ..+|.... | .-.|+|+||+.+|+.
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechh
Confidence 99999999999999999999999999999999975321 01221100 0 002599999999964
Q ss_pred --ceEecCCCCCc----cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhH
Q 017000 159 --SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (379)
Q Consensus 159 --~~~~iP~~~~~----~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~ 232 (379)
.++++|++++. .+++.+.+.+.++|+++ .++++++|++|||.|+|++|++++|+|+.+|++.|++++.+++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998754 34667777888999986 567899999999999999999999999999996677677888999
Q ss_pred HHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCH--------------HHHHHHHHHhccCCceEEEEcc
Q 017000 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 233 ~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++++++|++. +++.. ..++.+.+.+.+.+ ++|++|||+|.+ ..+++++++++++ |+++.+|.
T Consensus 224 ~~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~ 300 (393)
T TIGR02819 224 AQARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL 300 (393)
T ss_pred HHHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence 9999999975 44432 14577778888777 899999999985 4799999999997 99999998
Q ss_pred CCCCcccc-----------cCccee-eeccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCcee-eeeecchHHHHHHH
Q 017000 298 AASGQEIS-----------TRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRY 364 (379)
Q Consensus 298 ~~~~~~~~-----------~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~-~~~~~~~i~~a~~~ 364 (379)
+....... +..... .++.++.+.. ......+.+++++++++++++.++++ ++|||+|+++||+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~ 377 (393)
T TIGR02819 301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAE 377 (393)
T ss_pred cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHH
Confidence 63211111 111111 1134444321 11112346899999999999887777 78999999999999
Q ss_pred HhcCCeeEEEEecC
Q 017000 365 MHGGDCLRCVLKMQ 378 (379)
Q Consensus 365 ~~~~~~~Kvvl~~~ 378 (379)
+.+++..|++|+++
T Consensus 378 ~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 378 FDAGAAKKFVIDPH 391 (393)
T ss_pred HhhCCceEEEEeCC
Confidence 99887779999864
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.6e-50 Score=375.62 Aligned_cols=315 Identities=26% Similarity=0.363 Sum_probs=265.0
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.+.+.| ++++|+|.|+|+++||||||.|++||+.|.+.+.|. .+..++|+++|.|++|+|+++|++|+.++
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999998887 889999999999999999999999999999999997 34447899999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||||+.... .| + .|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~~-~~---------------------------~------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALGG-VG---------------------------R------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEccC-CC---------------------------C------------------CCcceeEEEecHHHceeCCCC
Confidence 9999986420 00 1 249999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++++||+++++++|||+++.+..++++|++|||+|+ |++|.+++|||+++|+ +++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999986 9999999999999998 6677667778778999999999999
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~ 323 (379)
+.+ .+|.+.+++++++ ++|+|||+.|+ +.+..++.+++++ |+++.+|.........++...+.. .+...+....
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 988 7799999999999 99999999999 5588899999997 999999986532333444333332 5555665544
Q ss_pred CC---CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcC-Cee-EEEEec
Q 017000 324 GF---KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGG-DCL-RCVLKM 377 (379)
Q Consensus 324 ~~---~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~-~~~-Kvvl~~ 377 (379)
.. ...+.+.++.+++.+|.+++. ++.+||++|..+|......+ +.. |+||++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 32 123456779999999999954 78999999976666544433 554 999974
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=2.4e-49 Score=375.58 Aligned_cols=338 Identities=24% Similarity=0.355 Sum_probs=276.7
Q ss_pred CccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 017000 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
.+|+.++++.+.+..+++.+.+++.|+|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 45566777777776666999999999999999999999999999999998886654467899999999999999999999
Q ss_pred cCCCCEEeecCC-cCCCCCccccCCCCCCCCCccCCC-cc---ceecCCCccccccCCCcccccCCccceeeeEEecCcc
Q 017000 85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGAT-GA---GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (379)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~-~~---G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 159 (379)
+++||+|++.+. .+|+.|.+|..+.++.|.+..... .. |.. .+ |+|+||+.+|++.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~~------------------G~~aey~~v~~~~ 148 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK-NY------------------GGYSDMIVVDQHF 148 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCc-CC------------------CccceEEEEchHH
Confidence 999999986554 579999999999999999754310 00 111 12 4999999999999
Q ss_pred eEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhh-HHHHHhc
Q 017000 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNF 238 (379)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~-~~~~~~l 238 (379)
++++|+++++++|+.+++...|+|+++.+...+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence 999999999999999999999999987666667899999999999999999999999999 77777666554 5677889
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEE
Q 017000 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i 317 (379)
|+++++++.+ . +.+++.+. ++|+|||++|....+..++++++++ |+++.+|.... ...+++..++. +..+
T Consensus 228 Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i 298 (360)
T PLN02586 228 GADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPLVLGRKLV 298 (360)
T ss_pred CCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHHHhCCeEE
Confidence 9999988654 2 23444443 6999999999877899999999996 99999997532 23444444333 6666
Q ss_pred EeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
.++..+. ..++++++++++++++++. + ++|+|+|+++||+.+.+++.. |+||++
T Consensus 299 ~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 299 GGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6665442 3578999999999999853 4 689999999999999998875 999986
No 20
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.4e-48 Score=372.19 Aligned_cols=368 Identities=56% Similarity=0.963 Sum_probs=303.3
Q ss_pred cccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
-.+||++++.+++++++++++|.|++.+++|+||+.++++|++|+..+.|..+ ..+|.++|||++|+|+++|++++.++
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 35699999999888899999999999999999999999999999999988752 34688999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|.+++++.|++.......|.. .++...+-.+|...+++.+.|+|+||+.++.+.++++|++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 999999998899999999999999999976532111221 2222222233444444445689999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++++++++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++.
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999988888899999999999999999999999999998679999999999999999999999987
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHh-ccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 017000 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC-HKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
.+...++.+.+.+.+.+++|+++||+|++..+..++..+ +++ |+++.+|.......+++.+..+..+.++.+++.+.+
T Consensus 243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 321 (373)
T cd08299 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGW 321 (373)
T ss_pred cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCC
Confidence 652234677777776668999999999877788877765 464 999999976433344555433444778888777665
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
..+.++.++++.+.++.+++.+++.+.|+++++++|++.+.+.+..|+++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 322 KSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred ccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 5556788888888888887777788999999999999999987767988864
No 21
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=7.2e-49 Score=371.38 Aligned_cols=338 Identities=22% Similarity=0.335 Sum_probs=280.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++. ++++++|.|+| .++||+|||.++++|++|+..+.+.. ...+|.++|||++|+|+++|++++++++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 78999998886 99999999987 69999999999999999987532211 12358899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|.+|..+.++.|..... +|.. .+ |+|+||+.+|++.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-RD------------------GGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-CC------------------CccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999986442 2221 23 4999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++|+++. .+.++|++ ++...+++|++|||+|+|++|++++|+|+.+|++.|++++++++++++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998774 45567776 46678899999999999999999999999999966889999999999999999999998765
Q ss_pred CCchHHHHHHHhcCC-Ccc-EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccC-ccee-eeccEEEeeecCC
Q 017000 249 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR-PFQL-VTGRVWKGTAFGG 324 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~-~~~~~i~~~~~~~ 324 (379)
.+ .+.+.+.+.+ ++| ++|||+|....+..++++++++ |+++.+|....+..++.. ...+ .+++++.|++.+.
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 33 4556666666 888 9999999988899999999996 999999976432222211 1122 3478888876542
Q ss_pred CC--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 325 FK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 ~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
.. ...++++++++++++++++.++++++|+|+|+++|++.+.+++.. |+|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 21 235788999999999999888999999999999999999988865 999986
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.6e-48 Score=368.79 Aligned_cols=332 Identities=24% Similarity=0.338 Sum_probs=271.3
Q ss_pred eeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCCEE
Q 017000 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (379)
Q Consensus 12 a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (379)
+++..+.++++.+.+++.|.|+++||+|||.+++||++|++.+.|..+...+|.++|||++|+|+++|++++++++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 44445544558899999999999999999999999999999998876444568999999999999999999999999999
Q ss_pred eecCCc-CCCCCccccCCCCCCCCCccCCC----ccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 92 IPCYQA-ECRECKFCKSGKTNLCGKVRGAT----GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 92 ~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~----~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
++.+.. +|+.|.+|+++++++|.+..... ..|.. . .|+|+||+.+|++.++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~-~------------------~G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR-N------------------QGGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCc-C------------------CCccccEEEEchHHeEECCCC
Confidence 876654 69999999999999999864310 01111 1 249999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-hHHHHHhcCCceEe
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFV 244 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~ 244 (379)
+++++++.++++..|+|+++..... .++|++|||.|+|++|++++|+|+.+|+ +|++++.+++ +.++++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999998654432 3689999999999999999999999999 7888876654 57888999999998
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecC
Q 017000 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 323 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 323 (379)
++.+ . +.+.+.+. ++|++|||+|.+..+..++++++++ |+++.+|.... ...+++..++ +++++.|+..+
T Consensus 229 ~~~~--~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 229 VTTD--S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred cCcC--H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCeEEEEeCcc
Confidence 8654 2 34445443 7999999999977889999999996 99999997532 2344444443 47788887654
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
. ..+++++++++++|++++. + +.|||+|+++|++.+.+++.. |+|+++.
T Consensus 300 ~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 300 G---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred C---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 3 3578999999999999854 4 679999999999999998875 9999863
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.9e-48 Score=366.47 Aligned_cols=332 Identities=29% Similarity=0.449 Sum_probs=280.9
Q ss_pred eeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC-CCCCCCcccccceeEEEEEeCCCCCccCCCCEE
Q 017000 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (379)
Q Consensus 13 ~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (379)
+++.+++++++++++|.|+++++||+|||.++++|++|++.+.+.. +..++|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4677788779999999999999999999999999999998874433 233568999999999999999999887 99999
Q ss_pred eecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC------
Q 017000 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 165 (379)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~------ 165 (379)
++.+..+|+.|.+|..+++++|.+... .|.. .+ |+|+||+.+|.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999986543 2221 23 4999999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++++.+++++.++|+++. ...+++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999988889999999864 5789999999999999999999999999999 7999999999999999999999998
Q ss_pred CCCCC-chHHHHHHHhcCC-Ccc----EEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEE
Q 017000 246 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK 318 (379)
Q Consensus 246 ~~~~~-~~~~~~i~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~ 318 (379)
+.+.+ .++.+.+++.+++ ++| ++|||+|+...+..++++++++ |+++.+|..... ..++...++. +.++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAK--TEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCC--cccCHHHHhhcccEEE
Confidence 76522 3577778888877 886 8999999988888999999996 999999986432 2333333333 66777
Q ss_pred eeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 319 GTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
+++.. ...++++++++++++++++.++++ .|||+|+++||+.+.+++.. |++++
T Consensus 294 g~~~~---~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 294 GNWGC---PPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred EEecC---CHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEec
Confidence 76543 235789999999999999877764 79999999999999998866 98885
No 24
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=9.2e-48 Score=365.97 Aligned_cols=364 Identities=56% Similarity=0.993 Sum_probs=311.9
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
+||+++.+.++++++++.+.|.+.+++|+||+.++++|++|++.+.+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 47899998887799999999999999999999999999999999888654 34678999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|++|+.+.+++|+........|.. .+|...+--+|+..+|+.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999999899999999999999999887754444443 4554445456777778888899999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++.+++++.+||+++.+.+++++|++|||+|+|++|++++|+|+.+|+..|++++++++++++++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999998999999988888899999999999889999999999999999668888889999999999999999987662
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhc-cCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCcc
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 328 (379)
+.++.+.+++.+.+++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+++..+...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 2267778888775599999999998788999999999 96 999999875322344555555444677888777666666
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
..+.+++++++++.+++.+++.++|+++|+++|++.+.+++..|++|+
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 789999999999999877778899999999999999988777788774
No 25
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=4.3e-48 Score=367.05 Aligned_cols=334 Identities=23% Similarity=0.336 Sum_probs=263.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC---CCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG---LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~---~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++..++.+++++++|.|+|+++||||||.|++||++|++.+.|..+.. .+|.++|||++|+|+++|++ +.++
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 6888888654349999999999999999999999999999999998865322 45789999999999999999 9999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||||++.+...|+.|.+|..+++++|...... ..|....+ |+|+||+.+|++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999998889999999999999999864421 11211122 49999999999999999999
Q ss_pred CCccccccccccchhhcchhh------hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeC---ChhhHHHHHh
Q 017000 167 APLDKVCLLGCGVPTGLGAVW------NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 237 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~------~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~---~~~~~~~~~~ 237 (379)
++ +. +++..++.++++++. ...+.++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 43 334445555444331 22336789999999999999999999999999 7999887 6889999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccC----cce-ee
Q 017000 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR----PFQ-LV 312 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~----~~~-~~ 312 (379)
+|++. +++.+ .++.+ . .. .+++|+||||+|.+..+..++++++++ |+++.+|........+++ ... +.
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~~-~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-KL-VGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-hh-cCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99986 45544 33333 2 11 248999999999977899999999996 999999986542333443 122 23
Q ss_pred eccEEEeeecCCCCccccHHHHHHHHHcCCC----CCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 313 TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEI----KVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 313 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
+++++.|+.... ..+++++++++.++.+ .+.++++++|+++|+++|++.+.++. .|+||+|
T Consensus 291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 488888875432 3578899999988762 25567899999999999999887654 5999975
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.2e-47 Score=359.72 Aligned_cols=321 Identities=22% Similarity=0.315 Sum_probs=269.7
Q ss_pred eeeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 13 AVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 13 ~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
+.+.+++. +++++++|.|+|+++||+|||.++++|++|++.+.|..+....|.++|||++|+|+++|++++++++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 45556653 38999999999999999999999999999999998876544457899999999999999999999999
Q ss_pred CEEeecCC-cCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 89 d~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
|+|++.+. .+|+.|.+|..++++.|.+... .|.. .+ |+|+||+.+|.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99987654 5799999999999999987653 2322 23 499999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46789999999999999999999999999999 799999999999999999999998754
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCC
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFK 326 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~ 326 (379)
+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ...+++..+ .+++++.+++..
T Consensus 218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~--- 281 (329)
T TIGR02822 218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN--- 281 (329)
T ss_pred c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC---
Confidence 3 11 126899999988888899999999996 999999975322 123333332 347777776533
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.+.++.+++++++++++++ ++++|+|+|+++|++.+.+++.. |+||.
T Consensus 282 ~~~~~~~~~~l~~~g~i~~---i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 282 TRADAREFLELAAQHGVRV---TTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred CHHHHHHHHHHHHhCCCee---EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 2357888999999999863 57999999999999999999876 99873
No 27
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.8e-47 Score=361.39 Aligned_cols=347 Identities=22% Similarity=0.291 Sum_probs=282.5
Q ss_pred CCCCCccccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCC
Q 017000 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (379)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 80 (379)
|.+......++|+++.++++++.+++++.|+|+++||+|||.++++|++|+..+.|..+...+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 44444555689999999999999999999999999999999999999999999888765446789999999999999999
Q ss_pred CCCccCCCCEEeecCC-cCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcc
Q 017000 81 GVTEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (379)
Q Consensus 81 ~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 159 (379)
+++++++||+|++.+. .+|+.|.+|.++.++.|.........++ ..| ....|+|+||+.+|.+.
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~ 145 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKF 145 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHH
Confidence 9999999999986654 4699999999999999987532100000 001 11235999999999999
Q ss_pred eEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHH-HHhc
Q 017000 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNF 238 (379)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~l 238 (379)
++++|+++++++++.+++++.|||+++.+....++|++|+|+|+|++|++++|+|+.+|+ ++++++.++++++. ++++
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL 224 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence 999999999999999999999999987666666899999999999999999999999999 67877777766654 4679
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEE
Q 017000 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 317 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i 317 (379)
|+++++++.+ . ..+.+.+. ++|++|||+|....+..++++++++ |+++.+|.... ..++.+..++ +++++
T Consensus 225 Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i 295 (357)
T PLN02514 225 GADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVI 295 (357)
T ss_pred CCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEE
Confidence 9988877644 2 23444443 7999999999877899999999996 99999998643 2344444333 48888
Q ss_pred EeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
.+++.+. ..+++++++++++++++ +++ ++|+|+|+.+|++.+.+++.. |+||+++
T Consensus 296 ~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 296 TGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred EEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 8887653 25789999999999876 445 689999999999999998876 9999875
No 28
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=6.8e-47 Score=359.80 Aligned_cols=348 Identities=28% Similarity=0.439 Sum_probs=289.7
Q ss_pred eeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCc------
Q 017000 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE------ 84 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~------ 84 (379)
||+++.++++++++++++.|.|.+++|+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998867999999999999999999999999999999998887653457889999999999999999986
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc-ceEec
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAKI 163 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~i 163 (379)
+++||+|++.+..+|+.|.+|+.+.+++|.+... +|.....| .....|+|++|+.++++ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~------------~~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCD------------DPHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchh---cccccccc------------CCCCCcccceEEEecCCCceEEC
Confidence 9999999999999999999999999999987653 33221000 00013599999999986 79999
Q ss_pred CCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE
Q 017000 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
|+++++.+++++++++.|||+++.+....++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++++
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999989999999998776667799999999999999999999999999789999899999999999999999
Q ss_pred eCCCCCC-chHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEee
Q 017000 244 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGT 320 (379)
Q Consensus 244 ~~~~~~~-~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~ 320 (379)
+++++.. .++...+++.+++ ++|++|||+|+...+..++++++++ |+++.+|........++++..++ ++.++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8876521 2234567788877 8999999999877789999999996 99999997643333344443323 37777777
Q ss_pred ecCCCCccccHHHHHHHHHcC--CCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 321 AFGGFKSRSQVPWLVDKYMKK--EIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~--~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
+.+ ...++.++++++.++ .+.+.++++++|+++|+++|++.+++++..|+||++
T Consensus 306 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 306 HNY---DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccC---CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 543 235788899999888 666777889999999999999999988867999863
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=8.1e-47 Score=357.93 Aligned_cols=335 Identities=28% Similarity=0.466 Sum_probs=285.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-----------CCCCCcccccceeEEEEEe
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 78 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~v 78 (379)
|||+++.++++ ++++++|.|+|.++||+||+.++++|++|+..+.+... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998876 99999999999999999999999999999876653211 1136889999999999999
Q ss_pred CCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc
Q 017000 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (379)
|++++.+++||+|++.+..+|++|.+|.++.++.|..... .|....+ |+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG------------------GGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC------------------CceeeEEEechH
Confidence 9999999999999999989999999999999999986432 2211012 499999999999
Q ss_pred ceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc
Q 017000 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l 238 (379)
.++++|+++++++++.+ .++.+||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5778999987 778899999999999999999999999999997899998999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccE
Q 017000 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV 316 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~ 316 (379)
|++.++++++ .++.+.+++.+++ ++|++||++|....+..++++++++ |+++.+|... ...++++..+. ++++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcE
Confidence 9999999876 6788888888877 7999999999877899999999996 9999999864 23344443333 3788
Q ss_pred EEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchH-HHHHHHHhcCCe--eEEEEe
Q 017000 317 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEI-NEAFRYMHGGDC--LRCVLK 376 (379)
Q Consensus 317 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i-~~a~~~~~~~~~--~Kvvl~ 376 (379)
+.+.+.. ...++++++++++++++++.++++++|+++|+ ++|++.+.+++. .|+||.
T Consensus 292 i~g~~~~---~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 292 LTGSICY---TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEecc---CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 8877543 23689999999999999887888999999996 799999988885 499873
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.3e-46 Score=354.49 Aligned_cols=362 Identities=36% Similarity=0.664 Sum_probs=293.3
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
++|||+++.++++++++++.+.|++.+++|+||+.++++|++|+....|..+ ..+|.++|||++|+|+++|+++..+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4689999999877799999999999999999999999999999999888654 346889999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccc-cCCCcc-cccCCccceeeeEEecCcceEecCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
||+|++.+. +|+.|.+|..+..++|.........|.. ++|-.... .+|++. .+++..|+|++|+.++++.++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998775 8999999999999999876533222221 11100000 001110 1133457999999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++++.+++++.+|+.++.+.+.+++|++|||+|+|++|++++|+|+.+|+.++++++++++|.++++++|++++++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998888888999999999988999999999999999977999999999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCC
Q 017000 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGG 324 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 324 (379)
+++ .++.+.+.+.+.+++|+++||+|+...+..++++++++ |+++.+|.........++...+ .++.++.++....
T Consensus 238 ~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 238 PKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 876 57777888877339999999999877899999999996 9999999753222334444443 3477776665433
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
......+++++++++++++++.+. .+.|+++++++|++.+++++..|+||+
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~~-~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDKL-VTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHHh-eEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 322356788999999999865333 468999999999999998887799885
No 31
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.2e-47 Score=321.67 Aligned_cols=317 Identities=25% Similarity=0.287 Sum_probs=272.3
Q ss_pred CccccceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017000 5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 5 ~~~~~~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 82 (379)
..|+..|.+++++.|.+ ++++++|.|+|.|++++||-.|+|+|..|....+|-+...++|++||.|.+|+|+++|+.|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 45678899999999987 9999999999999999999999999999999999999777899999999999999999999
Q ss_pred CccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEe
Q 017000 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 162 (379)
+++++||||+... ..|.|+|+..+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999997432 124999999999999999
Q ss_pred cCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc
Q 017000 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (379)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~ 241 (379)
+|+.+++.+||++...++|||..+++-.+++||++||++.| |++|+++.|++++.|+ .+|++.++.+|++.+++.|+.
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999999899899999999999965 9999999999999999 899999999999999999999
Q ss_pred eEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEE-
Q 017000 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWK- 318 (379)
Q Consensus 242 ~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~- 318 (379)
+.++++. +|+.+++.+.|++ |+|+++|.+|. +++...+.+|++. |++|.+|+.+.. .-+++...+.. .+++.
T Consensus 194 h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl-~~p~~l~~ls~k~l~lvr 268 (336)
T KOG1197|consen 194 HPIDYST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGL-IDPIPLNQLSPKALQLVR 268 (336)
T ss_pred ceeeccc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCC-CCCeehhhcChhhhhhcc
Confidence 9999988 8999999999999 99999999999 7799999999996 999999986432 11222111111 33332
Q ss_pred eeecCCCCccc----cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 319 GTAFGGFKSRS----QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 319 ~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
.+.++-...+. ...++..++.++.+++. |+++|||+++.+|+++++++... |+++...
T Consensus 269 psl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 269 PSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 22222222222 34567777888998865 89999999999999999999987 9998754
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.6e-45 Score=349.07 Aligned_cols=342 Identities=25% Similarity=0.346 Sum_probs=284.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +.+++++.|.+.+++|+||+.++++|++|++.+.+..+..+.|.++|||++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999887 89999999999999999999999999999998887655556688999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCCCC
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~~ 167 (379)
+|++.+..+|+.|..|..++++.|.+... +++.. ....|+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~--~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG--GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC--Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 99998888999999999999999987531 11100 0112499999999974 899999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.++..+.+||++ .+.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 999999998899999998 4778899999999998899999999999999997799999999999999999999999887
Q ss_pred CCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccC--ccee-eeccEEEeeecC
Q 017000 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTR--PFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~~~~-~~~~~i~~~~~~ 323 (379)
+ .++.+.+.+.+.+ ++|++|||+|+...+..++++++++ |+++.+|.......+.++ ++.. ....++.+....
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 296 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP 296 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence 6 5777788887766 8999999999878899999999996 999999976533223332 1111 224455443321
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCc-eeeeeecchHHHHHHHHhcCCe--eEEEEec
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEY-VTHNMTLGEINEAFRYMHGGDC--LRCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~~~i~~a~~~~~~~~~--~Kvvl~~ 377 (379)
...+++++++++++++++++.+. +.+.|+++|+++|++.+++++. .|++|++
T Consensus 297 --~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 --GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred --CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 13467899999999999998443 4456999999999999998874 4999975
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=3.8e-46 Score=351.41 Aligned_cols=320 Identities=17% Similarity=0.223 Sum_probs=252.3
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC----CCCCcccccceeEEEEEeCCCCCcc
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
-|+++++++++ ++++|+|.|+ +++||+|||.++|||++|++.++|.... ..+|.++|||++|+|+++|.+ .|
T Consensus 3 ~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~ 78 (341)
T cd08237 3 NQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY 78 (341)
T ss_pred ccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence 47899999998 9999999995 9999999999999999999999987532 257999999999999998874 79
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC
Q 017000 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
++||||++.+..+|+ |+.|. ..+.|.+... .|.. .+| +|+||+.+|++.++++|+
T Consensus 79 ~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~vP~ 133 (341)
T cd08237 79 KVGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSG-YDG------------------FMQDYVFLPPDRLVKLPD 133 (341)
T ss_pred CCCCEEEECCCCCch-hcccc--hhccCCCcce---eEec-CCC------------------ceEEEEEEchHHeEECCC
Confidence 999999999887777 55663 5577875432 2322 334 999999999999999999
Q ss_pred CCCccccccccccchhhcchhhh--ccCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEeCChhhHHHHHhcCCce
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
++++++|+++. ++.++|+++.. ...+++|++|||+|+|++|++++|+|+. +|+.+|++++++++|++++++.+++.
T Consensus 134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~ 212 (341)
T cd08237 134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY 212 (341)
T ss_pred CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence 99999887654 78888888643 3457899999999999999999999986 66658999999999999998866643
Q ss_pred EeCCCCCCchHHHHHHHhcCC-CccEEEEcCC---CHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEE
Q 017000 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVW 317 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i 317 (379)
.++ + ...+ ++|+|||++| .+..+..++++++++ |+++.+|.... ..++++..++ +++++
T Consensus 213 ~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i 276 (341)
T cd08237 213 LID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY--PVPINTRMVLEKGLTL 276 (341)
T ss_pred ehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC--CcccCHHHHhhCceEE
Confidence 221 1 1122 7999999999 456799999999996 99999997532 3344444333 48888
Q ss_pred EeeecCCCCccccHHHHHHHHHcC---CCCCCCceeeeeecc---hHHHHHHHHhcCCeeEEEEecC
Q 017000 318 KGTAFGGFKSRSQVPWLVDKYMKK---EIKVDEYVTHNMTLG---EINEAFRYMHGGDCLRCVLKMQ 378 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~i~~~~~~~---~i~~a~~~~~~~~~~Kvvl~~~ 378 (379)
.++..+ ...++++++++++++ ..++.++++++|+++ |+++|++...++...|+||+++
T Consensus 277 ~g~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 277 VGSSRS---TREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEeccc---CHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 887543 235789999999998 345778899999985 5666666665554459999875
No 34
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.4e-44 Score=344.14 Aligned_cols=360 Identities=44% Similarity=0.780 Sum_probs=293.0
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.+++++++|.|++.+++|+||+.++++|+.|+..+.|..+ ..+|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 79999999988899999999999999999999999999999998888655 35678899999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|++|++|++++.++|.+.... -+|.. +++...+--.|.........|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999875421 00000 0000000000111111123469999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++++++.+||.++....++.+|++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998888889999999999988999999999999999955999989999999999999999998876
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCCc
Q 017000 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS 327 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~ 327 (379)
.++...+.+.+.+ ++|++||++++...+..++++++++ |+++.+|.........+....+. .+..+.++.++....
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 5777788887765 8999999999777899999999996 99999987543233344444433 255556665544344
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 375 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl 375 (379)
...+++++++++++.+++.+.+.++|+++|+++|++.+.+++..|.||
T Consensus 315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 567889999999999987666788999999999999999888776665
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.1e-44 Score=341.62 Aligned_cols=334 Identities=22% Similarity=0.391 Sum_probs=277.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. ++++++|.|+|.+++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999999886 99999999999999999999999999999999888765556789999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|.+|.++++++|.+... ++.. .+ |+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-RD------------------GGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-cC------------------CcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999986542 2211 23 49999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
++++ +...+.++|+ +.+..++++|++|||+|+|++|++++|+|+. +|+..+++++++++|.++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4457778886 5677889999999999999999999999996 69977888999999999999999999998865
Q ss_pred CCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCC
Q 017000 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 326 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 326 (379)
.++.+.+.. .+ ++|++||++|.+..+..++++++++ |+++.+|.... ...+....+. +++++.+...
T Consensus 216 --~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~---- 284 (339)
T PRK10083 216 --EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL---- 284 (339)
T ss_pred --ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----
Confidence 556666643 23 5789999999877899999999996 99999987532 2222222222 3555555432
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC-e-eEEEEecCC
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-C-LRCVLKMQD 379 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~-~-~Kvvl~~~~ 379 (379)
....+++++++++++++++.+++.+.|+++++++|++.+.+++ . .|+||.+.|
T Consensus 285 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2357889999999999987666789999999999999998654 3 499999875
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=8.4e-45 Score=350.38 Aligned_cols=331 Identities=19% Similarity=0.252 Sum_probs=263.9
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccc-cCCCC-C-----CCCCcccccceeEEEEEeCC
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDP-E-----GLFPCILGHEAAGIVESVGE 80 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~-~g~~~-~-----~~~p~~~G~e~~G~V~~vG~ 80 (379)
|+||++++.+++. ++++++|.|+++++||+|||.++|||++|++.+ .|... . .++|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 4689999999987 999999999999999999999999999999876 44321 1 14688999999999999999
Q ss_pred CCC-ccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc-
Q 017000 81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 158 (379)
Q Consensus 81 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 158 (379)
+++ .+++||||++.+...|+.|..|.. +|.. .+| +|+||+.+|++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~-~~G------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYT-YPG------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------cccc-CCC------------------cceEEEEecHHh
Confidence 998 599999999998888988887721 1211 234 99999999987
Q ss_pred ---ceEecCCCCCccccccc-cccc-hhhcchh--------hhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 017000 159 ---SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRV 222 (379)
Q Consensus 159 ---~~~~iP~~~~~~~aa~l-~~~~-~ta~~al--------~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g--~~~v 222 (379)
.++++|+++++++|+++ +.+. .+++.++ .+.+++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999998865 2111 1233322 25678899999999975 999999999999985 4579
Q ss_pred EEEeCChhhHHHHHhc--------CCc-eEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceE
Q 017000 223 IGIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTS 292 (379)
Q Consensus 223 i~v~~~~~~~~~~~~l--------g~~-~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~i 292 (379)
++++++++|+++++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 776 4676643 14677888888887 8999999999888899999999996 888
Q ss_pred EEEccCC-CCcccccCcceee-eccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe
Q 017000 293 VIVGVAA-SGQEISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC 370 (379)
Q Consensus 293 v~~g~~~-~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~ 370 (379)
+.++... .....+++...+. +++++.|+..+ ...+++++++++++|++++.++++++|+|+|+++|++.+. ++.
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~ 360 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGG---NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIP 360 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCC---CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccC
Confidence 7764422 1112344444443 37888887643 2357999999999999999889999999999999999999 554
Q ss_pred -eEEEEecC
Q 017000 371 -LRCVLKMQ 378 (379)
Q Consensus 371 -~Kvvl~~~ 378 (379)
.|+||..+
T Consensus 361 ~gKvvl~~~ 369 (410)
T cd08238 361 GGKKLIYTQ 369 (410)
T ss_pred CceEEEECC
Confidence 49999763
No 37
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=8.3e-44 Score=336.75 Aligned_cols=340 Identities=29% Similarity=0.460 Sum_probs=285.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++.+++. +.+.+.|.|.| .+++|+||+.++++|++|+..+.|..+..++|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998887 89999999999 89999999999999999999988877666678999999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.+...|+.|.+|.+++..+|.+.....+.|. ...|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999987553221111 123499999999987 99999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++.+++++.|||+++ ...++++|++|||.|+|++|++++|+|+.+|+.+++++++++++.+.++++|+++++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999986 77889999999998889999999999999996578888888999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
++ .++.+.+++.+++ ++|++||++|+...+..++++++++ |+++.+|..............+..+.++.+....
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVP-- 294 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccC--
Confidence 76 5688888888776 8999999999866799999999996 9999998653321111112122335565554332
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-e-EEEEe
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-L-RCVLK 376 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~-~-Kvvl~ 376 (379)
....+++++++++++.+.+.+.+...|+++++++|++.+.+++. . |+|++
T Consensus 295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 24578889999999999876556788999999999999988776 4 88875
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6.5e-44 Score=335.61 Aligned_cols=330 Identities=27% Similarity=0.452 Sum_probs=280.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.+++++++|.|++.+++|+||+.++++|++|+..+.|..+....|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999966699999999999999999999999999999998888654445688999999999999999999999999
Q ss_pred EEeecC-CcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
+|++.+ ...|+.|.+|..+.++.|..... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 46899999999999999997653 2221 22 4999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+.+++.+++.+.+||+++.. .+++++++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998744 589999999999999999999999999999 7999999999999999999999998876
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCCc
Q 017000 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 327 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 327 (379)
.++.+.+++. +++|+++|++|.+..+..++++++++ |+++.+|... ...+++...+ .+++++.++..+.
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---
Confidence 5566666665 36999999998767899999999996 9999999864 2344444333 3388888876432
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
..++..+++++.+++++. ++ +.|+++|+++|++.+.+++.. |+|++
T Consensus 287 ~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 357888888888887764 34 689999999999999998876 99875
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.5e-43 Score=337.80 Aligned_cols=348 Identities=28% Similarity=0.399 Sum_probs=284.6
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.++++ +++.++|.|+| .+++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999998876 99999999988 49999999999999999999999887666678899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCccccc--------CCccceeeeEEecCc--
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHF--------MGTSTFSQYTVVHDV-- 158 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~--------~~~g~~a~~~~v~~~-- 158 (379)
|+|++.+...|+.|++|..+.+++|.+......+ ++ ++|+.-+.. ...|+|++|+.++.+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~ 149 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEM-----AK-----LYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADV 149 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccc-----cc-----ccccccccccccccccCCCCCeeEEEEEcccccC
Confidence 9999998889999999999999999976532100 00 000000000 113699999999988
Q ss_pred ceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc
Q 017000 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l 238 (379)
.++++|+++++++|+.++..+.+||+++ +.+++.+|++|||+|+|++|++++++|+.+|+.+|+++++++++.++++++
T Consensus 150 ~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~ 228 (386)
T cd08283 150 GPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSH 228 (386)
T ss_pred eEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 8999999999999999999999999987 788899999999998899999999999999985699999999999999998
Q ss_pred CCceEeCCCCCCc-hHHHHHHHhcCC-CccEEEEcCCC---------------------HHHHHHHHHHhccCCceEEEE
Q 017000 239 GVTEFVNPKDHDK-PIQQVLVDLTDG-GVDYSFECIGN---------------------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 239 g~~~v~~~~~~~~-~~~~~i~~~~~~-~~d~vid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
+...++++.+ . ++.+.+++.+.+ ++|++||++|+ ...+..++++++++ |+++.+
T Consensus 229 ~~~~vi~~~~--~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~ 305 (386)
T cd08283 229 LGAETINFEE--VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSII 305 (386)
T ss_pred CCcEEEcCCc--chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEE
Confidence 5446777665 4 478888888877 89999999875 34688999999996 999999
Q ss_pred ccCCCCcccccCcc-eeeeccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eE
Q 017000 296 GVAASGQEISTRPF-QLVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LR 372 (379)
Q Consensus 296 g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~--~K 372 (379)
|..... ...+++. .+.++.++.+.... ....+.++++++.++++.+.+++.+.|+++|+++|++.+.+++. .|
T Consensus 306 g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 381 (386)
T cd08283 306 GVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIK 381 (386)
T ss_pred cCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEE
Confidence 875432 2233332 22336666665322 23568889999999999876667889999999999999988773 49
Q ss_pred EEEe
Q 017000 373 CVLK 376 (379)
Q Consensus 373 vvl~ 376 (379)
+||+
T Consensus 382 ~~~~ 385 (386)
T cd08283 382 VVLK 385 (386)
T ss_pred EEec
Confidence 9986
No 40
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=2.4e-43 Score=334.00 Aligned_cols=336 Identities=26% Similarity=0.404 Sum_probs=279.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC---------CCCCcccccceeEEEEEeCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---------GLFPCILGHEAAGIVESVGE 80 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~V~~vG~ 80 (379)
|||+++.++++ +++++++.|++.+++|+||+.++++|+.|+..+.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999999887 999999999999999999999999999999988775311 14677899999999999999
Q ss_pred CCC--ccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc
Q 017000 81 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 81 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (379)
+++ .+++||+|++.+..+|+.|.+|..+++++|.... .+|... ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence 999 8999999999999999999999999999997543 233210 012499999999988
Q ss_pred -ceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh
Q 017000 159 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 159 -~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
.++++|+++++++++.+ .++.++|+++ +.+++++|++|||.|+|++|++++|+|+.+|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7889999986 77889999999997789999999999999998678889899999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccE
Q 017000 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRV 316 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~ 316 (379)
+|++.++++.. .++.+.+.+.+++ ++|++||++|....+..++++++++ |+++.+|.......+........++++
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 99998888765 6777888888877 8999999999767789999999996 999999875432222221111123566
Q ss_pred EEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 317 WKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 317 i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
+.++.... ..+.+++++++++.+++.+++.+.|+++++++|++.+++++.. |+|+
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 66654332 3578899999999998765578999999999999999988765 8874
No 41
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=4.3e-43 Score=331.72 Aligned_cols=337 Identities=28% Similarity=0.423 Sum_probs=285.3
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++. ++++++|.|+| .+++|+||+.++++|+.|+..+.|..+..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998887 99999999986 89999999999999999999998876655568899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.+...|+.|.+|..++.+.|....+. .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999999889999999999999998865431 1211 22 499999999987 89999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+++.+++.+.+||.++....++.+|++|||.|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877778889999999999889999999999999994489999899999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 324 (379)
.+ .++...+.+.+.+ ++|++|||+|....+..+++.++++ |+++.+|.... ...+++.. +.+++++.+....
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc-
Confidence 76 5677778887776 8999999999877889999999996 99999986432 23444433 3346676654322
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC---eeEEEEec
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD---CLRCVLKM 377 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~---~~Kvvl~~ 377 (379)
...+.+++++++++.+++.+++.++|+++++++|++.+.+.. ..|+||++
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 145788999999999987777789999999999999988762 45999974
No 42
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=7.6e-44 Score=331.13 Aligned_cols=302 Identities=22% Similarity=0.303 Sum_probs=240.1
Q ss_pred cceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecc-ccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCc
Q 017000 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
++|++++.+++. +++++.|.|+|+++||+|||.+++|| ++|+..+.|..+. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998887 99999999999999999999999996 7999988887543 2579999999999999999998 6
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
+++||||++. |..|..|.. | .. |+|+||+.+|++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 9999999873 223332211 1 12 499999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++++. ++++ .+.+||+++.+ . ..++++|||+|+|++|++++|+|+.+|++.|++++.+++|++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998754 5454 56899998744 3 34689999999999999999999999996677888888887776643 445
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 017000 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
++.+ . ...++|++|||+|+..+++.++++++++ |+++++|..... .+++...+ .+++++.++...
T Consensus 192 ~~~~--~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~~ 257 (308)
T TIGR01202 192 DPEK--D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAEW 257 (308)
T ss_pred Chhh--c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC--cccccchhhhcceEEEEeccc
Confidence 4432 1 1238999999999987899999999996 999999986432 33333333 336777765433
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEe
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC-LRCVLK 376 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~-~Kvvl~ 376 (379)
...++++++++++++++++.++++++|||+|+++|++.+.+++. .|++|+
T Consensus 258 ---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 ---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23579999999999999998899999999999999998776654 499984
No 43
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.1e-42 Score=331.48 Aligned_cols=361 Identities=31% Similarity=0.508 Sum_probs=291.0
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCc---cC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~---~~ 86 (379)
|||+++.+++.++++.+.|.|.+.+++|+||+.++++|++|+....+..+. .+|.++|||++|+|+.+|++++. ++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999998777999999999999999999999999999999988876644 56789999999999999999988 99
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|..+.+++|.+...+...+....+|+..+...-..-.-....|+|++|+.++.+.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence 99999998889999999999999999998653211110001111111000000000012469999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+++.+++++.|||+++.+...+.++++|||+|+|++|++++++|+.+|+.+++++++++++.+.++++|++.++++
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999998887888999999999889999999999999999559999899999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~ 324 (379)
++ .++.+.+++...+ ++|++||++++.+.+..++++++++ |+++.+|.........++...+ ..+.++.+++..
T Consensus 240 ~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (367)
T cd08263 240 AK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA- 315 (367)
T ss_pred Cc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC-
Confidence 76 6777788887766 8999999999965789999999996 9999998754322333443443 246666664321
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.....++.++++++++.+.+.+.+.+.|+++++.+|++.+++++.. |+||+
T Consensus 316 -~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 -RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred -CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1235788899999999998766678899999999999999998876 88874
No 44
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=7.6e-43 Score=329.30 Aligned_cols=333 Identities=29% Similarity=0.432 Sum_probs=283.9
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.++++++++.+.+.|.+.+++|+||+.++++|++|+....|..+ ...+|.++|+|++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999999877799999999999999999999999999999998887654 235688999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+...|+.|.+|+.+..++|..... .|+. .+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIG-TDG------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCcc-CCC------------------cceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999998775 2332 334 9999999999999999999
Q ss_pred CCccccccccccchhhcchhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++++++.+++.+.|||+++... ..+.+|++|||+|+|.+|++++|+|+.+|..+|+++.+++++.+.++++|++++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 99999999999999999987665 46889999999999889999999999999338898989999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 323 (379)
+++ . +.+.+++++.+ ++|+++|++|+...+..++++++++ |+++.+|.... ..++... +.+++++.+....
T Consensus 219 ~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~ 291 (340)
T cd05284 219 ASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG 291 (340)
T ss_pred CCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc
Confidence 876 4 77888888776 8999999999877799999999996 99999987542 2222222 2346676665433
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
....+.+++++++++.+.+ ..+.|+++++++|++.+.+++.. |+|+.+
T Consensus 292 ---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 292 ---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2357888999999998874 34679999999999999988876 888753
No 45
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2e-42 Score=327.10 Aligned_cols=339 Identities=27% Similarity=0.450 Sum_probs=286.6
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.++.+++.|.|.+.+++|+||+.++++|++|+..+.|..+...+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999999888899999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCCCC
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~~ 167 (379)
+|++.+...|++|.+|+.+..+.|.+... .|.. .+ |+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-CC------------------CcceeEEEcccccCceEECCCCC
Confidence 99987778899999999999999998542 2221 12 499999999974 999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++++++.+++.+.+||+++.+..++.++++|||+|+|++|++++|+|+.+|+ +|+++.+++++.+.++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999998999999998778889999999999999999999999999999 899998999999999999999998876
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc-cccCccee-eeccEEEeeecCCC
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQL-VTGRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~-~~~~~i~~~~~~~~ 325 (379)
+ ..++...+.++..+++|++|||+|+...+...+++++++ |+++.+|....... ..++...+ .++.++.+....
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM-- 293 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC--
Confidence 4 245666777766558999999999767789999999996 99999987543221 23333333 336666665432
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
....+++++++++++.+.+.+++.+.++++++++|++.+++++.. |+|++
T Consensus 294 -~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 -PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred -CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 235788899999999988766678899999999999999988776 88764
No 46
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.3e-42 Score=327.40 Aligned_cols=336 Identities=27% Similarity=0.427 Sum_probs=282.7
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC------------CCCCCcccccceeEEEEE
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP------------EGLFPCILGHEAAGIVES 77 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~ 77 (379)
|||+++..++.++++.++|.|++.+++|+||+.++++|++|+..+.|..+ ..++|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78999998888899999999999999999999999999999998877543 224577899999999999
Q ss_pred eCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecC
Q 017000 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 78 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 157 (379)
+|++++.+++||+|++.+...|+.|..|.++.+++|..... .|.. . .|+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-Q------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-c------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999976432 2211 2 249999999999
Q ss_pred cceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh
Q 017000 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+.++++|+++++.+++.+.+.+.+||+++.....+.++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998776667789999999889999999999999999788899899999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEE
Q 017000 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVW 317 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i 317 (379)
+|++.+++.++ .++.+.+.+...+++|++||+.|....+..++++++++ |+++.+|............. .+++.++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI 294 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence 99988888765 56667777766558999999999777899999999996 99999987543222222221 2246666
Q ss_pred EeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.+..... .+++.+++++++++.+++. ....|+++++++|++.+.+++.. |++++
T Consensus 295 ~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 6655432 2578889999999998753 56789999999999999988765 98875
No 47
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=7.7e-42 Score=322.98 Aligned_cols=338 Identities=28% Similarity=0.418 Sum_probs=276.9
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCC-CCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~-~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++..++. +++++++.|+|. +++|+||+.++++|+.|+....|..+ ...|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 68999988764 999999999985 99999999999999999998887655 3357789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (379)
|+|++.+..+|+.|.+|++++.+.|.+... +|.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 999999989999999999999999986432 1110 0 00013499999999865 99999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++++++.++++++|||+++. .+++.+|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 57899999999998899999999999999975788888889999999999985 4555
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 324 (379)
+. .++...+.+.+++ ++|++||++|....+..++++++++ |+++.+|..... ........ +..+.++.+..
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence 44 5677888888876 8999999999877899999999996 999999975421 22222222 22355554332
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
......++++++++.++.+.+.+++.+.|+++|+++|++.+.+++..|+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 1234678999999999998876667889999999999998887666788874
No 48
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=6.9e-42 Score=328.94 Aligned_cols=340 Identities=21% Similarity=0.271 Sum_probs=275.8
Q ss_pred ccccceeeeeec--CCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC----------CCCCCcccccc
Q 017000 6 QVITCKAAVAWE--PNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHE 70 (379)
Q Consensus 6 ~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e 70 (379)
.|.+|||+++.. .+.| +++.++|.|.+.+++|+||+.++++|++|+....+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 457899998853 3332 78899999999999999999999999999988766411 01122488999
Q ss_pred eeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCcccee
Q 017000 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (379)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a 150 (379)
++|+|+++|++++.+++||+|++.+...|+.|..|..+..++|..... +|+...+ |+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~------------------g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNY------------------GSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCC------------------Ccce
Confidence 999999999999999999999999999999999999999999986543 3432122 4999
Q ss_pred eeEEecCcceEecCCCCCccccccccccchhhcchhhhc--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC
Q 017000 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 151 ~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~--~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
+|+.++...++++|+++++++++.+++++.|||+++... +++++|++|||+|+ |++|++++++|+.+|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999987554 67899999999997 9999999999999999 7778889
Q ss_pred ChhhHHHHHhcCCceEeCCCCCC--------------------chHHHHHHHhcCC--CccEEEEcCCCHHHHHHHHHHh
Q 017000 228 DPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECC 285 (379)
Q Consensus 228 ~~~~~~~~~~lg~~~v~~~~~~~--------------------~~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~~l 285 (379)
++++++.++++|+++++++++.+ ..+.+.+.+++++ ++|++|||+|+ ..+..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence 99999999999999998864311 1356777787776 69999999998 6689999999
Q ss_pred ccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHH
Q 017000 286 HKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRY 364 (379)
Q Consensus 286 ~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~ 364 (379)
+++ |+++.+|..... ...+....+ ..+.++.+++... ..++.+++++++++.+.+ .+.++|+++|+++|++.
T Consensus 306 ~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~ 378 (393)
T cd08246 306 DRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQL 378 (393)
T ss_pred ccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHH
Confidence 996 999999875321 122222222 2366666665432 247888999999998874 36789999999999999
Q ss_pred HhcC-Cee-EEEE
Q 017000 365 MHGG-DCL-RCVL 375 (379)
Q Consensus 365 ~~~~-~~~-Kvvl 375 (379)
+.++ +.. |+|+
T Consensus 379 ~~~~~~~~gkvvv 391 (393)
T cd08246 379 MHRNQHHVGNMAV 391 (393)
T ss_pred HHhCccccceEEE
Confidence 9988 555 8876
No 49
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.4e-41 Score=320.91 Aligned_cols=337 Identities=25% Similarity=0.394 Sum_probs=272.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.++++++++.+.|.|+|.+++|+||+.++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999988789999999999999999999999999999998765531 1224678899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|..+.+++|.... +.|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTK---GVGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcc---eeeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 9999999999999999999999999998643 12221 23 49999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+++.+ ..+.++++++.. ...+|++|+|.|+|++|++++|+|+.+|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888754 355556554433 34689999999889999999999999999668888889999999999999999988
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
++ .++.+.+++.+++ ++|++|||.|+...+..++++++++ |+++.+|.......+++ ...+++++++.++...
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~-- 289 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGR-- 289 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEcc--
Confidence 76 6788888888776 8999999999878899999999996 99999987543222221 1122336666665421
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEecC
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKMQ 378 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~~ 378 (379)
.....+..+++++.++ +.+.+.+.+.|+++++++|++.+.+++..|+|++|+
T Consensus 290 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 290 EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 1123456688888888 545455789999999999999988877449999875
No 50
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.4e-41 Score=323.58 Aligned_cols=338 Identities=25% Similarity=0.396 Sum_probs=269.9
Q ss_pred ccceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCc
Q 017000 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
..++++++..++. +++++.+.|++.+++|+||+.++++|++|+.++.+... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4466666776665 99999999989999999999999999999998876321 1235778999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
+++||+|++.+..+|++|..|..+.++.|..... ++....+ |+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~------------------g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVH------------------GSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCC------------------CcccceEEcchHHeEECC
Confidence 9999999999999999999999999999986321 2211112 499999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++.++++.. .+.++|+++ ...++.+|++|||+|+|++|++++|+|+.+|+..|++++++++|.++++++|+++++
T Consensus 154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999999887522 344577775 778899999999999999999999999999996788898899999999999999987
Q ss_pred CCCCCCchHHHHHHHh---cCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEee
Q 017000 245 NPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGT 320 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~ 320 (379)
+++....++.+.+.+. +.+++|++||++|+...+..++++++++ |+++.+|.... ...+..... .+++++.++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~ 308 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGV 308 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEe
Confidence 6543224566666554 2348999999999778899999999996 99999997532 122222222 236677765
Q ss_pred ecCCCCccccHHHHHHHHHcCCCCCCCceeeeeec--chHHHHHHHHhcCCee-EEEEe
Q 017000 321 AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTL--GEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~--~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
+.. ...+..++++++++.+.+.+++.+.|++ +++++|++.+.+++.. |+||.
T Consensus 309 ~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 309 FRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred ccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 432 2467889999999998766667788665 7999999998888765 99985
No 51
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.3e-41 Score=324.99 Aligned_cols=343 Identities=28% Similarity=0.376 Sum_probs=274.6
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++.+++. ++++++|+|.+ .+++|+||+.++++|++|+..+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 68899988875 99999999986 799999999999999999999888765 3468899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCC---CccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEec
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGA---TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKI 163 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~---~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~i 163 (379)
|+|++.+..+|+.|..|+.+..+.|...... ..+|.. . ..-..|+|++|+.+|.+ .++++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~--------------~-~~~~~g~~a~y~~v~~~~~~~~~l 143 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYV--------------D-MGPYGGGQAEYLRVPYADFNLLKL 143 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccccccc--------------c-cCCCCCeeeeEEEeecccCcEEEC
Confidence 9999999999999999999999999864321 001100 0 00012599999999976 89999
Q ss_pred CCCCCcc---ccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 164 DPQAPLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 164 P~~~~~~---~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
|+++++. +++.++..+.+||+++ ..+++++|++|||.|+|++|++++|+|+++|+.+|++++++++|.++++++|+
T Consensus 144 P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 222 (375)
T cd08282 144 PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222 (375)
T ss_pred CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9999998 5677888899999987 78899999999999889999999999999998678889999999999999998
Q ss_pred ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH-----------HHHHHHHHhccCCceEEEEccCCCCcc------
Q 017000 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKGWGTSVIVGVAASGQE------ 303 (379)
Q Consensus 241 ~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~~~~------ 303 (379)
..+++++ .++.+.+.+++.+++|+++||+|+.. .+..++++++++ |+++.+|.......
T Consensus 223 -~~v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 223 -IPIDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred -eEeccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 4566655 56777788776668999999998752 588999999996 99998886532111
Q ss_pred -----cccCcceee-eccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 304 -----ISTRPFQLV-TGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 304 -----~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
..++...+. .+..+.+... .....+.+++++++++++++.+++.+.|+++++++|++.+.+++..|+|+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 111211111 1333333221 1235688899999999998766688999999999999999988833999863
No 52
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.9e-42 Score=321.66 Aligned_cols=309 Identities=21% Similarity=0.229 Sum_probs=252.7
Q ss_pred ceeeeeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 017000 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
|||+++.+++.| +++.++|.|.|+++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 689999998854 788899999999999999999999999999998886543 35788999999999999999999
Q ss_pred c-cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEe
Q 017000 84 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (379)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 162 (379)
+ +++||+|++.+. .+ |+|++|+.+|++.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999975321 01 3999999999999999
Q ss_pred cCCCCCccccccccccchhhcchhhhccCCCCCCEEEEE-c-CChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-G-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~-G-ag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+|+++++++++.+++...|||.+ .+.... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888888899754 455555 56666665 4 59999999999999999 89999999999999999999
Q ss_pred ceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEE
Q 017000 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWK 318 (379)
Q Consensus 241 ~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~ 318 (379)
++++++++ .++.+.+++.+.+ ++|++||++|+.. ....+.+++++ |+++.+|.........++... +.+++++.
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 99999876 6788889888877 8999999999854 67789999996 999999875332211232222 33477888
Q ss_pred eeecCCCC---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 319 GTAFGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
++....+. ...++++++++++ +.++ +.++++|+|+|+++|++.+.+++.. |++|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TELK--TTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Cccc--cceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 77755432 2346777888887 6665 5688999999999999999998765 99874
No 53
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.7e-41 Score=317.50 Aligned_cols=333 Identities=30% Similarity=0.517 Sum_probs=278.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +++.+++.|++.+++|+|||.++++|+.|+....+..+...+|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999998876 99999999999999999999999999999998888765555688999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|..|+.++++.|..-.. ++.. . .|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVH-R------------------DGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeec-C------------------CCcceeEEEechh-eEECCCCCCH
Confidence 99998889999999999999999953221 2211 1 2499999999999 9999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++ ..+.++++++ ...++.+|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.++++++|+++++++.+
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 999877 4677888876 77889999999999889999999999999999 8999988999999999999999998876
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCCc
Q 017000 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKS 327 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~ 327 (379)
.++.+.+.+.+++ ++|++|||.|+...+..++++++++ |+++.+|.... ...++...+.. ++++.+.. ...
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~---~~~ 285 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG--PVTFPDPEFHKKELTILGSR---NAT 285 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC--CCccCHHHHHhCCCEEEEec---cCC
Confidence 5688888888776 8999999998877899999999996 99999986542 22233322222 55555442 123
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC-ee-EEEEec
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGD-CL-RCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~-~~-Kvvl~~ 377 (379)
...+.+++++++++.+++.+.+...++++++++|++.+.+++ .. |+|++|
T Consensus 286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 357888999999999987444778999999999999999874 54 999875
No 54
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.1e-41 Score=318.14 Aligned_cols=334 Identities=28% Similarity=0.441 Sum_probs=277.6
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++.++++ +++.+.|.|+| .+++|+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 78999998887 99999999986 8999999999999999999988876543 357899999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~~ 166 (379)
|+|++....+|+.|.+|..+..+.|.+... +|.. ++| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999999986442 3322 444 99999999975 99999999
Q ss_pred CCccccc-----cccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc
Q 017000 167 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (379)
Q Consensus 167 ~~~~~aa-----~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~ 241 (379)
++++.+. ++...+.+||+++ ..+++.+|++|+|.|+|++|++++|+|+++|+.+++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9882222 1225678888876 567899999999998899999999999999996689998888899999999999
Q ss_pred eEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc-ceeeeccEEEe
Q 017000 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKG 319 (379)
Q Consensus 242 ~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~i~~ 319 (379)
+++++.. .++.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.... ...++. ..+.++.++.+
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence 9999876 5677888888777 8999999999878899999999996 99999987542 233333 23344777765
Q ss_pred eecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 320 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
.... ....+++++++++++.+++.+++.+.|+++++++|++.+.+.+..|++|+
T Consensus 291 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 291 GPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred ecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 4221 23578889999999999876667899999999999999888776799986
No 55
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=4e-41 Score=317.92 Aligned_cols=335 Identities=30% Similarity=0.476 Sum_probs=279.5
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +.+.+.+.|++.+++|+||+.++++|+.|+..+.|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999998886 99999999999999999999999999999998887654334577899999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcc-----eEecC
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 164 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~iP 164 (379)
+|++.++.+|+.|++|..++.++|...... |.. . .|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee---ccC-C------------------CCcceeeEEecccccccccEEECC
Confidence 999999999999999999999999876532 211 2 24999999999998 99999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++.+++.+ ..+.+||+++. ..++++|++|||+|+|.+|++++|+|+.+|++.|+++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998876 68889999874 45899999999998899999999999999994488888999999999999999999
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeec
Q 017000 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~ 322 (379)
++++ .++.+.+++.+.+ ++|++|||+++...+..++++++++ |+++.+|.........+.+..+. ++..+.+...
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 8876 6788888888777 8999999999877789999999996 99999986433222222222222 2555554432
Q ss_pred CCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
. ....+++++++++++.+.+.+.+..+|+++++.+|++.+.+++ . |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 293 A---SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 2356888999999999876445678899999999999999988 6 99874
No 56
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4.1e-41 Score=323.83 Aligned_cols=344 Identities=22% Similarity=0.292 Sum_probs=278.4
Q ss_pred Cccccceeeeeec--CCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC----------CCCCC-cccc
Q 017000 5 GQVITCKAAVAWE--PNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILG 68 (379)
Q Consensus 5 ~~~~~~~a~~~~~--~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G 68 (379)
-.|.+|||+++.. +++| +++.++|.|.+.+++|+||+.++++|++|++...+... ....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 3456899999955 5544 89999999999999999999999999999876655321 11123 2799
Q ss_pred cceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccc
Q 017000 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTST 148 (379)
Q Consensus 69 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~ 148 (379)
||++|+|+++|++++.+++||+|++.+...|++|++|..++++.|..... +|....+ |+
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~------------------g~ 141 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF------------------GS 141 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC------------------cc
Confidence 99999999999999999999999999999999999999999999976542 3322122 49
Q ss_pred eeeeEEecCcceEecCCCCCccccccccccchhhcchhhh--ccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017000 149 FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 149 ~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
|++|+.++.+.++++|+++++++++.+.+.+.+||+++.. .+++.+|++|||+|+ |++|++++|+|+.+|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999998754 467899999999998 9999999999999999 77888
Q ss_pred eCChhhHHHHHhcCCceEeCCCCCC--------------------chHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHH
Q 017000 226 DIDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284 (379)
Q Consensus 226 ~~~~~~~~~~~~lg~~~v~~~~~~~--------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~ 284 (379)
++++++.+.++++|+++++++++++ ..+.+.+.+++++ ++|++|||+|. ..+..++++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHh
Confidence 7889999999999999999875421 1356677778876 89999999997 668899999
Q ss_pred hccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHH
Q 017000 285 CHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 363 (379)
Q Consensus 285 l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~ 363 (379)
++++ |+++.+|..... ...++...+ ..+.++.++.+.. ..++++++++++++.+.+ .+.++++++|+++|++
T Consensus 300 l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~ 372 (398)
T TIGR01751 300 CRRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQ 372 (398)
T ss_pred hccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHH
Confidence 9996 999999875431 122222222 2355666654432 245788999999998874 3779999999999999
Q ss_pred HHhcCCee-EEEEecC
Q 017000 364 YMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 364 ~~~~~~~~-Kvvl~~~ 378 (379)
.+.+++.. |+|+++.
T Consensus 373 ~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 373 DVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHcCCCCceEEEEeC
Confidence 99988876 9998763
No 57
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=6.5e-41 Score=313.38 Aligned_cols=316 Identities=26% Similarity=0.395 Sum_probs=263.0
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +++++++.|++.+++|+||+.++++|++|.....|..+ .|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 68999998765 99999999999999999999999999999998887653 5788999999999999997 68999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|...+..+|+.|.+|+.+.++.|.+... .+....+| +|++|+.++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------------~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG------------------AFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC------------------ceEEEEEechHHeEECcCCCCH
Confidence 99999999999999999999999998653 22211233 9999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++.+ ..+.++|. +.+..++++|++|||+|+|.+|++++|+|+.+|+ +|+++..+++++++++++|++.++++++
T Consensus 133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~- 208 (319)
T cd08242 133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA- 208 (319)
T ss_pred HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc-
Confidence 888764 34556665 4577889999999999999999999999999999 6999988999999999999988877644
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCCc
Q 017000 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKS 327 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~ 327 (379)
. +.+ ++|++|||+|+...+..++++++++ |+++.++.... ...++...+ .++.++.+...+
T Consensus 209 -~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~---- 271 (319)
T cd08242 209 -E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG---- 271 (319)
T ss_pred -c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc----
Confidence 1 233 8999999999877789999999996 99998776432 223333222 336666665432
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
.+++++++++++++++.+++.+.|+++++++|++.+.++...|+||+
T Consensus 272 --~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 272 --PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred --cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 37889999999999766678899999999999999987775699986
No 58
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7.4e-41 Score=315.92 Aligned_cols=324 Identities=22% Similarity=0.369 Sum_probs=262.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-----------CCCCCcccccceeEEEEEe
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 78 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~v 78 (379)
|||+++.++ ++++++++.|++.+++|+||+.++++|+.|+....|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689999876 599999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCc-cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecC
Q 017000 79 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (379)
Q Consensus 79 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 157 (379)
|+++++ +++||+|++.+...|+.|..|..+..+ .. .|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------~~------------------~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------EA------------------PGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------CC------------------CCceeeeEEech
Confidence 999997 999999999999999999999432110 01 249999999999
Q ss_pred cceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh
Q 017000 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+.++++|+++++++++ ++.++++||++ ...+++++|++|||+|+|++|.+++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 55688899998 578899999999999889999999999999999668888889999999999
Q ss_pred cCCceEeCCCCCCc--hHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eee
Q 017000 238 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVT 313 (379)
Q Consensus 238 lg~~~v~~~~~~~~--~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~ 313 (379)
+|+++++++++... .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|....... ..+.. +.+
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~ 280 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRK 280 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhc
Confidence 99998998765211 232 34444445 8999999999855688999999996 99999987532222 11111 223
Q ss_pred ccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 314 GRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
+.++.+.... ..+++.+++++++++.+.+.+++.+.|+++++++|++.+.+++.. |+|++
T Consensus 281 ~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 281 ELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred ceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 5555543322 234788899999999998776778999999999999999988875 99874
No 59
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.6e-41 Score=316.38 Aligned_cols=329 Identities=25% Similarity=0.397 Sum_probs=276.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++++++++++|.|.+.+++|+||+.++++|++|+....|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 78999999998899999999999999999999999999999998888766556788999999999999999998999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+..+|+.|.+|..++++.|..... +|.. .+| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEE-LDG------------------FFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccc-cCc------------------eeeeeeecchhceEECCCCCCH
Confidence 99999888999999999999999987653 3322 234 9999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
.+++.+++.+.+||+++... .++++++|||+|+ |.+|++++|+|+.+|+ +++++.+++++.+.++++ ++++++++
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987555 8999999999988 9999999999999999 889888999999999888 77666553
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--cccCcceeeeccEEEeeecCCCC
Q 017000 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPFQLVTGRVWKGTAFGGFK 326 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~ 326 (379)
++.+.+++. +++|++|||+|+ ..+..++++++++ |+++.+|....... ..+... +.+++++.+... .
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~ 283 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---A 283 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---C
Confidence 355556554 379999999998 4589999999996 99999997543222 222222 334677766532 2
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
.+.+++.+++++.++.++. .+.+.|+++|+++|++.+.+++.. |+|+..
T Consensus 284 ~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 284 TKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred CHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 3467889999999998873 467899999999999999887765 998864
No 60
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.3e-40 Score=318.94 Aligned_cols=336 Identities=25% Similarity=0.393 Sum_probs=270.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC------C-CCCCCcccccceeEEEEEeCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~vG~~v 82 (379)
+.+.++..+ . ++++++|.|++.+++|+||+.++++|++|+..+.+.. + ..++|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 455555543 3 9999999999999999999999999999988776321 1 13567899999999999999999
Q ss_pred CccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEe
Q 017000 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 162 (379)
+.+++||+|++.+..+|+.|..|..++++.|..... .|.. .+| +|++|+.++++.+++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~g------------------~~~~~v~v~~~~~~~ 164 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-ADG------------------AFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CCC------------------cceeeEEechHHeEE
Confidence 999999999999999999999999999999996552 3332 234 999999999999999
Q ss_pred cCCCC-------Cccccccccccchhhcchhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHH
Q 017000 163 IDPQA-------PLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (379)
Q Consensus 163 iP~~~-------~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~ 234 (379)
+|+++ +++ +++++.++++||+++... .++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++
T Consensus 165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~ 243 (384)
T cd08265 165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL 243 (384)
T ss_pred CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 99864 444 555666888999987666 689999999999889999999999999998779999889999999
Q ss_pred HHhcCCceEeCCCCC-CchHHHHHHHhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCcccccCccee
Q 017000 235 AKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL 311 (379)
Q Consensus 235 ~~~lg~~~v~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~ 311 (379)
++++|+++++++++. ..++.+.+++++.+ ++|+|+|+.|+. ..+..++++++++ |+++.+|.... .+++.+..+
T Consensus 244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~ 320 (384)
T cd08265 244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVL 320 (384)
T ss_pred HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHH
Confidence 999999999887642 13678888888887 899999999873 4688999999996 99999986532 222222222
Q ss_pred -eeccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 017000 312 -VTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVL 375 (379)
Q Consensus 312 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl 375 (379)
.+..++.+.... .....+.+++++++++.+++.+++.+.|+++++++|++.+.++...|+|+
T Consensus 321 ~~~~~~l~~~~~~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 321 QVRRAQIVGAQGH--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hhCceEEEEeecc--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 224455554321 12346889999999999987666789999999999999977665458875
No 61
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.9e-40 Score=312.72 Aligned_cols=333 Identities=26% Similarity=0.416 Sum_probs=273.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++.+..++++|.|++.+++|+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.+++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 799999998875449999999999999999999999999999888776543 2367899999999999999999999999
Q ss_pred EEeecC-CcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 90 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
+|++.+ ..+|+.|.+|..+..+.|.+... .|.. .+| +|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VDG------------------GMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-ccC------------------cceeEEEEchHHeEeCCCCCC
Confidence 998765 46899999999999999987653 2322 234 999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+.+++.++..+.|||+++ ..+++++|++|||+|+|++|++++|+|+. +|+ +|+++++++++++.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999986 77889999999999999999999999998 499 899999999999999999999998875
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCC
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFK 326 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~ 326 (379)
+. .++.+.+++.++ ++|.++++.++...+..++++++++ |+++.+|.... .++++...+. .+..+.++...
T Consensus 216 ~~-~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--- 287 (338)
T PRK09422 216 RV-EDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG--- 287 (338)
T ss_pred cc-ccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC---
Confidence 31 346666777665 6886655556668899999999996 99999987532 2233322222 25566554432
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
...+++++++++.++.+.+ .+ +.++++++++|++.+.+++.. |+++.+.
T Consensus 288 ~~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 288 TRQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred CHHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 2357888999999998864 34 468999999999999988876 9998765
No 62
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.8e-40 Score=312.63 Aligned_cols=333 Identities=31% Similarity=0.475 Sum_probs=280.7
Q ss_pred ceeeeeecCCCC-eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 10 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~~~-~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||++++..++++ +.+.+.|.|.+.+++|+|++.++++|+.|.....|..+ ..++|.++|+|++|+|+.+|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999999998 68888889999999999999999999999999888765 2356788999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+..+|+.|.+|+.++.+.|..... .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965432 2222 23 499999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
++.+++.++.++.+||+++.+...++++++|||.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998888889999999999889999999999999999 799999999999999999999888876
Q ss_pred CCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCC
Q 017000 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 325 (379)
+ ..+.+.+ +.+.+ ++|+++||+|....+..++++++++ |+++.+|.... ...++...+.. +.++.++...
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 289 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG-- 289 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC--
Confidence 5 4555555 44455 8999999999877899999999996 99999987532 22333333333 5566654432
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
....+..++++++++.+.+. .+.+++++++++++.+.+++.. |+|+++
T Consensus 290 -~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 -TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred -CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23578889999999998864 5789999999999999988876 999864
No 63
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.4e-40 Score=312.71 Aligned_cols=331 Identities=31% Similarity=0.482 Sum_probs=269.4
Q ss_pred eeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCC-CCC--CCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPE--GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 12 a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~-~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|+++.++.. +++++.+.|++.+++|+||+.++++|+.|+..+.+. ... ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 457778865 999999999999999999999999999998876432 111 1357789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+..+|+.|++|+.+.+++|.+.... +.... .|+|++|+.++++.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPV------------------DGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccC------------------CCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999864321 10001 24999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
+++++.+ ..+.+|++++ +.+++++|++|||.|+|++|++++|+|+.+|+++|+++.+++++.++++++|+++++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998877 4778899885 8889999999999988999999999999999954899989999999999999999998876
Q ss_pred CCch---HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 017000 249 HDKP---IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 249 ~~~~---~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
.+ +.+.+.+.+.+ ++|++|||.|+...+...+++++++ |+++.+|..... ..++...+ ..++.+.+....
T Consensus 217 --~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (343)
T cd05285 217 --EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY 291 (343)
T ss_pred --ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC
Confidence 34 37777777776 8999999999866799999999996 999999864322 22222111 224555544322
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEE
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVL 375 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~--~Kvvl 375 (379)
...+++++++++++.+.+.+.+.++|+++++.+|++.+.+++. .|++|
T Consensus 292 ----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 ----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred ----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2568889999999987755557789999999999999998863 59998
No 64
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.1e-40 Score=310.86 Aligned_cols=336 Identities=30% Similarity=0.449 Sum_probs=271.2
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.+++..+.+.+.+.|+|.+++++||+.++++|+.|+..+.+.. .....|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888779999999999999999999999999999988755432 1224567899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+.++|+.|.+|..+++++|.... ..|.. . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVD-T------------------DGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEecc-C------------------CCcceEEEEechHHcEECcCC
Confidence 9999999999999999999999999997532 22221 1 349999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++++.+ +++..+.++++++. ....+|++|||.|+|++|++++|+|+.+|+.+|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 45557778887654 456789999999889999999999999998678888888999999999999998887
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
+. .++. .+.+...+ ++|++|||+|+...+..++++++++ |+++.+|.......+.+....++++..+.+....
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGR-- 289 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecC--
Confidence 65 5666 77777776 9999999999877889999999996 9999998754322222222123335566554421
Q ss_pred CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEe
Q 017000 326 KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLK 376 (379)
Q Consensus 326 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~ 376 (379)
.....+.+++++++++.+.+.+.+.+.++++++++|++.+.+++..|+|++
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 123457789999999998866667788999999999999998883399875
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.2e-40 Score=312.17 Aligned_cols=334 Identities=28% Similarity=0.401 Sum_probs=274.6
Q ss_pred eeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCCE
Q 017000 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (379)
|++..++.+..+++++++.|++.+++|+||+.++++|++|+..+.|.....++|.++|||++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 46777777766999999999999999999999999999999998887655567889999999999999999999999999
Q ss_pred Ee-ecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 91 VI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 91 V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
|+ ......|++|++|.++..+.|....... +| +........|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--------~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-------NG--------KYPDGTITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-------cc--------cccCCCcCCCcceeEEEechhheEECCCCCCH
Confidence 97 4455789999999999999998765320 00 00001122459999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++.+.+.+.+||+++.+ ..+++|++|+|.|+|++|++++++|+.+|+ +++++++++++.+.++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 9999999999999998644 568999999998889999999999999999 8999999999999999999999887754
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCCCcc
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~ 328 (379)
.++.. . ..+++|++|||+|....+..+++++++. |+++.+|...... .+++..+ .++.++.++.... .
T Consensus 223 -~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 223 -PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred -hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 33322 1 1348999999999865689999999996 9999998754322 3344442 3488888876553 3
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.++..++++++++++++ . .+.|+++++++||+.+.+++.. |+|++
T Consensus 292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 57889999999998874 3 4789999999999999998876 98874
No 66
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=5.4e-40 Score=310.29 Aligned_cols=336 Identities=29% Similarity=0.473 Sum_probs=276.4
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+.++ +.+++.+.|++.+++|+||+.++++|+.|+....+.. ....|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999999876 9999999999999999999999999999998887765 224578899999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+...|+.|++|..+.+..|++... +|.. .+ |+|++|+.+|.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSR-RD------------------GAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eecc-cC------------------CcccceEEechHHeEECcCCCCH
Confidence 99999988999999999999999988642 2321 22 49999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
++++++ ..+.+||+++. ..+++++++|||+|+|.+|++++|+|+.+|+++|+++.+++++.+.++++|++.++++++
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 999887 57789999874 778999999999988999999999999999954999988899999999999999998876
Q ss_pred CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcc-e-eeeccEEEeeecCCC-
Q 017000 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-Q-LVTGRVWKGTAFGGF- 325 (379)
Q Consensus 250 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~-~~~~~~i~~~~~~~~- 325 (379)
.. .+.+.....+ ++|++|||.|....+..++++++++ |+++.+|.......+....+ . +.++.++.++.....
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 44 6667777766 8999999998877889999999996 99999997543211111111 1 133666666654322
Q ss_pred -CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhc-CCee-EEEE
Q 017000 326 -KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHG-GDCL-RCVL 375 (379)
Q Consensus 326 -~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~-~~~~-Kvvl 375 (379)
.....+.+++++++++.+.+.+.+...+++++++++++.+.+ ++.. |+|+
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 123567889999999998754456788999999999999998 5444 8874
No 67
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2e-40 Score=313.20 Aligned_cols=316 Identities=19% Similarity=0.263 Sum_probs=250.2
Q ss_pred ccccceeeeeec-CCC-C----eEEEE---eeCCC-CCCCeEEEEEeeeeccccccccccCCCCCCCCCccccc--ceeE
Q 017000 6 QVITCKAAVAWE-PNK-P----LVIED---VQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAG 73 (379)
Q Consensus 6 ~~~~~~a~~~~~-~~~-~----~~~~~---~~~p~-~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G 73 (379)
++.+.|++++.+ +.+ | |++.+ ++.|. +++||||||+.|+++|+.|+..+.+.......|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 345568888844 322 2 88877 46663 48999999999999999987644332222245889998 8899
Q ss_pred EEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeE
Q 017000 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 153 (379)
Q Consensus 74 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~ 153 (379)
+|..+|++++.+++||+|+.. |+|+||+
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999631 2899999
Q ss_pred EecCcc--eEe--cCCCCCcc-ccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC
Q 017000 154 VVHDVS--VAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 154 ~v~~~~--~~~--iP~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
.++.+. +++ +|++++++ +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 998753 544 59999986 688899999999999888889999999999988 9999999999999999 8999989
Q ss_pred ChhhHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc-c-
Q 017000 228 DPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-I- 304 (379)
Q Consensus 228 ~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~- 304 (379)
++++++.++ ++|+++++++++ ..++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|....... .
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~ 268 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSAS 268 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCC
Confidence 999999987 799999999864 1367777877776689999999998 5789999999996 99999997543210 0
Q ss_pred --ccCccee-eeccEEEeeecCCCC--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 305 --STRPFQL-VTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 305 --~~~~~~~-~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
.+++..+ .+++++.|++...+. ..+.++++++++++|++++. +.++|+|+|+++|++.+++++.. |+||+++
T Consensus 269 ~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 269 QGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred CCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 1122222 337788887654321 12457789999999999853 67789999999999999999886 9999975
Q ss_pred C
Q 017000 379 D 379 (379)
Q Consensus 379 ~ 379 (379)
+
T Consensus 347 ~ 347 (348)
T PLN03154 347 K 347 (348)
T ss_pred C
Confidence 3
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-39 Score=307.52 Aligned_cols=334 Identities=31% Similarity=0.495 Sum_probs=280.2
Q ss_pred ceeeeeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccCC
Q 017000 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
|||+++.+++ ..+++.+++.|.+.+++|+||+.++++|++|..++.|..+. .+.|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998887 23999999999999999999999999999999888876543 245678999999999999999999999
Q ss_pred CCEEeecC-CcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 88 GDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 88 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
||+|++.+ ..+|+.|.+|+.+..+.|.+... .|.. .. |+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-VD------------------GTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-cC------------------CcceeEEEeccccEEECCCC
Confidence 99999876 57899999999999999987643 2221 22 49999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58999999999988 7799999999999999 8999999999999999999999998
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
+.+ .++.+.+.+.+.+ ++|++||+.++...+..++++++++ |+++.+|.... ...+++...+ .++.++.+....
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC
Confidence 876 5788888888766 8999999888778899999999996 99999987542 2223433332 236666664432
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
...++++++++++++.+.+ .+ +.|+++++++|++.+.+++.. |+|+++
T Consensus 293 ---~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 ---TRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---CHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2367888999999999874 23 679999999999999988776 999875
No 69
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3.8e-41 Score=308.96 Aligned_cols=269 Identities=26% Similarity=0.411 Sum_probs=221.3
Q ss_pred ccccceeEEEEEeCCCCC------ccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCc
Q 017000 66 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139 (379)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~ 139 (379)
++|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.++++.|.+... +|.....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 589999999999999999 89999999999999999999999999999997653 22210000
Q ss_pred ccccCCccceeeeEEecCc-ceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 017000 140 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 218 (379)
Q Consensus 140 ~~~~~~~g~~a~~~~v~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g 218 (379)
.....|+|+||+.+|++ .++++|+++++++++.+++.+.|+|+++ +.....+|++|||+|+|++|++++|+|+.+|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012499999999997 7999999999999999998999999986 4456679999999999999999999999999
Q ss_pred CCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 219 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 219 ~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+++|++++.+++|+++++++|+++++++.+ ..+.+++.+.+ ++|++||++|.+..++.++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999989999999999999999887643 24556667766 8999999999988899999999996 99999997
Q ss_pred CCCCcccccCcceeee-ccEEEeeecCCCCccccHHHHHHHHHc--CCCCCCCceeeeeecchH
Q 017000 298 AASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYMK--KEIKVDEYVTHNMTLGEI 358 (379)
Q Consensus 298 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~i~~~~~~~~i 358 (379)
.......++++..++. ++++.++... ...+++++++++.+ +++++.++++++||++|+
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~---~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNY---EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCC---CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 5432344555555544 8888887543 23679999999998 467777889999999874
No 70
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.1e-39 Score=306.41 Aligned_cols=329 Identities=33% Similarity=0.542 Sum_probs=273.0
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++..+++++.++++|.|.+.+++|+|++.++++|++|+..+.|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999988666699999999999999999999999999999999988766566788999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.....|+.|.+|..+..+.|.+.. .+|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEE-VD------------------GGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccc-cC------------------CeeeeEEEechhheEECCCCCCH
Confidence 9999998899999999999999998752 23422 23 49999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~ 248 (379)
++++.+++++.+||+++.. +.+.++++|||+|+ |++|++++++++..|+ +|+++.+++++.+.++++|.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998766 88999999999988 9999999999999999 7888888889999999899887775432
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc-cccCcceeeeccEEEeeecCCCCc
Q 017000 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQLVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~ 327 (379)
+.+.+.+.. ++|++++++|... ...+++++++. |+++.+|....... +..... .+++..+.++.. ..
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLL-ILKEIRIIGSIS---AT 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHH-HhCCcEEEEecC---CC
Confidence 555555543 7999999999844 88899999996 99999987543211 111111 123455554421 23
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
..+++++++++.++.+.+ .+.++|+++++++|++.+.+++.. |+|++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 457888999999998874 367899999999999999988876 88874
No 71
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=1.3e-39 Score=307.17 Aligned_cols=331 Identities=27% Similarity=0.413 Sum_probs=264.3
Q ss_pred eeecCCCCeEEEEeeCCCCCCCeEEEEEeeeecccccccccc-CCCCC--CCCCcccccceeEEEEEeCCCCCccCCCCE
Q 017000 14 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (379)
Q Consensus 14 ~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (379)
++++.+. +++++.+.|++.+++|+||+.++++|++|+..+. +..+. ...|.++|+|++|+|+++|++++.+++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4667766 9999999999999999999999999999987763 32211 135778999999999999999999999999
Q ss_pred EeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCcc
Q 017000 91 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (379)
Q Consensus 91 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~ 170 (379)
|++.+.+.|+.|.+|..+..+.|..... +|...++ ....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999997532 2211000 0123499999999999999999999999
Q ss_pred ccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCC
Q 017000 171 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 171 ~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
+|+. ..+++++|+++.+.... ++++|||.|+|.+|++++|+|+.+|+++++++++++++.++++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 9876 46788899987665556 9999999988999999999999999867899988899999999999999998765
Q ss_pred chHHHHHHHhc-C-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCCCCc
Q 017000 251 KPIQQVLVDLT-D-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGFKS 327 (379)
Q Consensus 251 ~~~~~~i~~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 327 (379)
.++ .+.. . +++|+++|+.|....+..++++++++ |+++.+|.... ....++.. +.+++++.+... .
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~ 288 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG--PVPLPLNALVAKELDLRGSFR----F 288 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccCcHHHHhhcceEEEEEec----C
Confidence 332 2222 2 26999999999767789999999996 99999986432 22222222 223556655432 2
Q ss_pred cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 328 RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 328 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
...+++++++++++.+.+.+.+.++|+++++++|++.+.+++.. |+|+++
T Consensus 289 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 289 DDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 34688899999999988766678999999999999999877765 999874
No 72
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=7.1e-40 Score=306.87 Aligned_cols=309 Identities=22% Similarity=0.297 Sum_probs=258.2
Q ss_pred ceeeeeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCcc
Q 017000 10 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
|||+++.+++.| ++++++|.|.+.++||+|||.++++|+.|+..+.|..+ ....|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999888764 78899999999999999999999999999999888764 23568899999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC
Q 017000 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
++||+|++.+. + |+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------H------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------C------------------CcceeEEEEchHHeEECCC
Confidence 99999975421 2 3999999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++++++.+++...++|+++ ..+++++|++|||+|+ |.+|++++|+|+.+|+ +++++..++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999988889999875 5688999999999987 9999999999999999 788888888888888889999998
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeec
Q 017000 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~ 322 (379)
++.+ .++.+.+.+.+.+ ++|++|||+|+ ..+..++++++++ |+++.+|... ....++.+.. +.++.++.++..
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 8876 6788889998887 99999999998 4588999999996 9999998752 2223333222 234777777665
Q ss_pred CCCC-------ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 323 GGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 323 ~~~~-------~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.... ....+..+++++.++.+.+. +.+.|+++|+++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 4321 12357789999999998854 46889999999999998877665 88874
No 73
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.4e-39 Score=280.82 Aligned_cols=319 Identities=22% Similarity=0.315 Sum_probs=258.3
Q ss_pred CCCccccceeeeeecCCCC---eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEe
Q 017000 3 TEGQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESV 78 (379)
Q Consensus 3 ~~~~~~~~~a~~~~~~~~~---~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~v 78 (379)
++.++...|+++|.+.|+| +++++.++|.....+|+||.+|+.|||+|+..+.|.+|.. ++|.+-|.|++|.|+.+
T Consensus 13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~v 92 (354)
T KOG0025|consen 13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAV 92 (354)
T ss_pred ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEe
Confidence 4466678899999999998 8899999998878889999999999999999999999887 78999999999999999
Q ss_pred CCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc
Q 017000 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (379)
Q Consensus 79 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 158 (379)
|+++++|++||+|..... +.|+|++|.+.+++
T Consensus 93 Gs~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~ 124 (354)
T KOG0025|consen 93 GSNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSES 124 (354)
T ss_pred cCCcCccCCCCeEeecCC------------------------------------------------CCccceeeEeeccc
Confidence 999999999999975432 24599999999999
Q ss_pred ceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhh----HH
Q 017000 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----FD 233 (379)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~----~~ 233 (379)
.+++++++++++.||++..+..|||..|.+..++.+||+|+-.|| +++|++.+|+|+++|+ +-|.+.++... .+
T Consensus 125 ~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~ 203 (354)
T KOG0025|consen 125 DLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKK 203 (354)
T ss_pred ceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHH
Confidence 999999999999999999999999999999999999999999998 9999999999999999 55555465433 45
Q ss_pred HHHhcCCceEeCCCCC-CchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee
Q 017000 234 RAKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL 311 (379)
Q Consensus 234 ~~~~lg~~~v~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~ 311 (379)
.++.+||++|+...+. +.++... .... .+.+.|||+|+.. ..++.+.|.++ |+.+.+|..+ ..++.++...+
T Consensus 204 ~Lk~lGA~~ViTeeel~~~~~~k~---~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMS-kqPv~~~ts~l 277 (354)
T KOG0025|consen 204 QLKSLGATEVITEEELRDRKMKKF---KGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMS-KQPVTVPTSLL 277 (354)
T ss_pred HHHHcCCceEecHHHhcchhhhhh---hccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCcc-CCCcccccchh
Confidence 5667999999865432 1111111 1123 7899999999955 77888999997 9999999864 45556555444
Q ss_pred -eeccEEEeeecCCCCccc--------cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEecC
Q 017000 312 -VTGRVWKGTAFGGFKSRS--------QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLKMQ 378 (379)
Q Consensus 312 -~~~~~i~~~~~~~~~~~~--------~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~--~Kvvl~~~ 378 (379)
+++++++|+|+..+.... ...++.+++..|+|...+ ....+|+|...|++...+... .|-+|.++
T Consensus 278 IFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 278 IFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred eeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 459999999998874322 245678888999998653 366799999999885444333 26666553
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.7e-39 Score=302.70 Aligned_cols=331 Identities=30% Similarity=0.477 Sum_probs=273.8
Q ss_pred ceeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 89 (379)
|||+++.+++. +++.+.+.|++.+++|+||+.++++|+.|+....|..+.. +|.++|+|++|+|+.+|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~-~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC-CCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998886 9999999999999999999999999999999888875533 678999999999999999999999999
Q ss_pred EEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 90 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
+|++.+...|+.|.+|..++++.|..... .|.. .+ |+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-CC------------------CcceeEEEecHHHcEECcCCCCH
Confidence 99999988999999999999999987642 2211 22 49999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
.+++.+ ..+.++++++ +.+++++|++|||+|+|.+|.+++++|+.+|+++|+++++++++.+.++++|++.++++++
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 998766 6778899887 7889999999999988999999999999999955888889999999999999988888765
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCCcc
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 328 (379)
.++... +....+++|++|||+|....+..++++++++ |+++.+|........++.+..+. ++.++.+... ..
T Consensus 214 -~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 286 (334)
T cd08234 214 -EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFI----NP 286 (334)
T ss_pred -CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEecc----CH
Confidence 344444 3333338999999998777899999999996 99999987543223344433333 3555555432 22
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
..++++++++.++.+.+.+.+.++|+++++++|++.+.+ +.. |+|+
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 468889999999998876667889999999999999998 544 8886
No 75
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=6.3e-39 Score=302.62 Aligned_cols=332 Identities=27% Similarity=0.394 Sum_probs=268.7
Q ss_pred ecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC---CCCCCCcccccceeEEEEEeCCCCCccCCCCEEe
Q 017000 16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92 (379)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (379)
++++.++++++.|.|+|.+++|+||+.++++|+.|+..+.+.. ...++|.++|+|++|+|+++|++++.+++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 5788889999999999999999999999999999998765542 1224577899999999999999999999999999
Q ss_pred ecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCcccc
Q 017000 93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172 (379)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~a 172 (379)
+.+...|+.|..|..+..+.|..... +|.. . .|+|++|+.++++.++++|++++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---Eeec-C------------------CCcceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999998642 2221 2 249999999999999999999998655
Q ss_pred ccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCch
Q 017000 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252 (379)
Q Consensus 173 a~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~ 252 (379)
+++..+.+|++++ .....+|++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.. .+
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~ 217 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--ED 217 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cC
Confidence 4566788888875 345779999999888999999999999999954888888899999999999988888765 67
Q ss_pred HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCccccH
Q 017000 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQV 331 (379)
Q Consensus 253 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 331 (379)
+.+.+.+.+.+ ++|++|||.|+...+...+++++++ |+++.+|.......+++....+..+.++.+... ......+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhH
Confidence 88888887776 8999999999877899999999996 999999875322222221111222555554431 1222457
Q ss_pred HHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEec
Q 017000 332 PWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCLRCVLKM 377 (379)
Q Consensus 332 ~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~Kvvl~~ 377 (379)
.+++++++++.+++.+.+.+.++++++.++++.+.+++..|+|++|
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 7899999999998655578999999999999999877655999875
No 76
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.3e-39 Score=305.38 Aligned_cols=311 Identities=23% Similarity=0.281 Sum_probs=246.5
Q ss_pred cceeeeeecCCC-CeEEEEeeC----CCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccce--eEEEEEeCC
Q 017000 9 TCKAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESVGE 80 (379)
Q Consensus 9 ~~~a~~~~~~~~-~~~~~~~~~----p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~vG~ 80 (379)
-+|++....+.. .|++++.++ |+|+++||||||.|++||+.|+..+.|..+. ...|.++|++. .|++..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 456666544443 299999987 7899999999999999999999988885433 24578899754 456666888
Q ss_pred CCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecC-cc
Q 017000 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VS 159 (379)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 159 (379)
.++.+++||+|+.. |+|+||+.+|+ ..
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999621 28999999999 79
Q ss_pred eEecC-CCCCcc-ccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH
Q 017000 160 VAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 160 ~~~iP-~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
++++| +++++. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678876 788899999999999878889999999999988 9999999999999999 7999889999999999
Q ss_pred h-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCccc----ccCcce-
Q 017000 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI----STRPFQ- 310 (379)
Q Consensus 237 ~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~~~- 310 (379)
+ +|+++++++.+ ..++.+.+++.+.+++|++||++|+ ..+..++++++++ |+++.+|........ ..+...
T Consensus 194 ~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~ 270 (338)
T cd08295 194 NKLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI 270 (338)
T ss_pred HhcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence 8 99999998654 1367777777765689999999998 6689999999996 999999865321110 011122
Q ss_pred eeeccEEEeeecCCCCc--cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 311 LVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 311 ~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
+++++++.++....... ...+.++++++.++++++. +...|+++++++|++.+++++.. |+|+++
T Consensus 271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 22356666654433211 2346778999999998864 45669999999999999988876 999874
No 77
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=8.8e-39 Score=301.06 Aligned_cols=334 Identities=26% Similarity=0.393 Sum_probs=276.1
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++...+.+ +.+.+.+.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 689998854433 788888888889999999999999999999988876542 25578899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+..+|+.|.+|.+++++.|.+... +|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-VD------------------GGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-cC------------------cceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999997532 3322 22 48999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++++.+||+++.+..++.++++|||+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999899999998878888999999999988 7999999999999999 7888889999999998888887776
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcc-eeeeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 323 (379)
..+ .++.+.+.+.+.+ ++|++++++|. ..+..++++++++ |+++.+|..... ....... .+..+.++.+....
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 654 5666777776666 89999999998 5588999999996 999999865432 2222221 22336666665433
Q ss_pred CCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 324 GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
. ...+.++++++.++.+.+ ++.+.|+++++++|++.+.+++.. |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 293 T---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred C---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 2 346888999999998774 467899999999999999887765 99886
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5.3e-39 Score=301.20 Aligned_cols=320 Identities=28% Similarity=0.381 Sum_probs=258.3
Q ss_pred ceeeeeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++..++ +.+.+.+.+.|++++++|+||+.++++|++|+..+.+. ....+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899887776 34888888888899999999999999999998887642 222457789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.+...|+.|.+|+.+..+.|.+... +|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-SN------------------GGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-CC------------------CceeeEEEcCHHHceeCCCCCC
Confidence 999999989999999999999999997543 2321 22 4999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+++++.+++++.+||+++.. +++++|++|+|+|+ |++|++++++|+.+|+ +|+++. +.+.++++|++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 99999999999999998754 88999999999998 9999999999999999 777775 23777889998888764
Q ss_pred CCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCC
Q 017000 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFK 326 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~ 326 (379)
+ ..+.+++++ +++|+++|++|+ ..+..++++++++ |+++.+|... .....++...+.. +.++.+...+
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~--- 280 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG--- 280 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC---
Confidence 3 345566666 689999999998 5799999999996 9999998742 1223333333332 5555655433
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EE
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RC 373 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kv 373 (379)
.+++++++++++...+ . .+.+.|+++|+++|++.+.+++.. |+
T Consensus 281 ~~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 281 TRKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred CHHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 2357888888885433 2 356889999999999998877654 54
No 79
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=6.8e-39 Score=303.00 Aligned_cols=299 Identities=19% Similarity=0.263 Sum_probs=231.6
Q ss_pred eEEEEeeCCCC-CCCeEEEEEeeeecccccccccc---CCCCCCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCc
Q 017000 22 LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWS---GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (379)
Q Consensus 22 ~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 97 (379)
+++.++|.|+| +++||||||.|+|||+.|+.... +.....++|.++|||++|+|+++|++++++++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 88999999987 49999999999999999853322 2111235678999999999999999999999999997420
Q ss_pred CCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccc----cc
Q 017000 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 173 (379)
Q Consensus 98 ~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~----aa 173 (379)
++|+||+.++++.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 2799999999999999999865443 44
Q ss_pred cccccchhhcchhhhccCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEeCCCCC
Q 017000 174 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 249 (379)
Q Consensus 174 ~l~~~~~ta~~al~~~~~~~~g--~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~ 249 (379)
+++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|+++++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5667889999998788888877 99999988 9999999999999998679999899999999876 99999998876
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC-ccccc----Cc--ceeee--ccEEEee
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG-QEIST----RP--FQLVT--GRVWKGT 320 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~----~~--~~~~~--~~~i~~~ 320 (379)
.++.+.+++.+++++|++||++|+. .+..++++++++ |+++.+|..... ..... .+ ..+.. +++....
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 6788888888766899999999985 479999999996 999999853210 11111 00 01111 2222222
Q ss_pred ecCCCC--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 321 AFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 321 ~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
...... ....++++++++.++.+++. ....++++|+++|++.+.+++.. |+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 211111 12346678889999998865 34557999999999999988875 999875
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.2e-38 Score=297.53 Aligned_cols=323 Identities=28% Similarity=0.383 Sum_probs=267.8
Q ss_pred ceeeeeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCcc
Q 017000 10 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
||++++.+++. ++.+.+.+.|.+.+++|+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998884 48888988888999999999999999999999988876555678899999999999999999999
Q ss_pred CCCCEEeecC-CcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 86 QPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 86 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
++||+|++.+ ..+|+.|.+|..+.+++|..... +|.. .+ |+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-VD------------------GGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-cC------------------CceEEEEEecchhEEECC
Confidence 9999998754 36899999999999999997764 2322 22 499999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
+++++.+++.+++++.+||+++ +.++++++++|||+|+|++|++++++|+..|+ +|+++..++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88999999999999999999999999999998 899998999999999999998887
Q ss_pred CCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCC
Q 017000 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 324 (379)
+... . ...++|+++++.+....+..++++++++ |+++.+|.... ....++...+..+..+.++...
T Consensus 217 ~~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCC-
Confidence 7654 1 1237999999877778899999999996 99999885321 1112222222235555554322
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
....+.+++++++++.+.+ +.+.|+++++++|++.+.+.+.. |+|+
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2346788899999998875 25889999999999999988776 8764
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3.4e-38 Score=296.36 Aligned_cols=327 Identities=31% Similarity=0.477 Sum_probs=268.6
Q ss_pred eeeeeecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCCE
Q 017000 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 90 (379)
||+++.++|..+.+++.|.|.+.+++|+|++.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68889888656999999999999999999999999999999988887654567889999999999999999999999999
Q ss_pred EeecCC-cCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCc
Q 017000 91 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (379)
Q Consensus 91 V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~ 169 (379)
|++.+. ..|+.|.+|++++.++|.+.... +.. .+ |+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-TQ------------------GGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-cC------------------CccccEEEEcHHHeEECCCCCCH
Confidence 987654 67999999999999999986642 211 12 49999999999999999999999
Q ss_pred cccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC
Q 017000 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 170 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
.+++.+++.+.+||+++.. .+++++++|||+|+|.+|++++++|+.+|+ +|+++.+++++.+.++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999899999998744 789999999999988899999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCCcc
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSR 328 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~ 328 (379)
...... ..+++|+++|+.+....+..++++++++ |+++.+|..... ...+....+.. +.++.++..+. .
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 222222 2247999999988778899999999996 999999865322 11211222222 55565555432 2
Q ss_pred ccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 329 SQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 329 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
..++.+++++.++.+.+ ..+.|+++++++|++.+.+++.. |+|+
T Consensus 286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 56788889999998874 35789999999999999988876 7764
No 82
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.1e-38 Score=297.57 Aligned_cols=304 Identities=19% Similarity=0.220 Sum_probs=243.2
Q ss_pred cceeeeeecC--CCC----eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCC
Q 017000 9 TCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (379)
Q Consensus 9 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 82 (379)
+||++++.++ +.+ +++++.|.|+|+++||+|||.+++||+.|.....+ ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 5899999883 443 88999999999999999999999999987653221 124688999999999995 44
Q ss_pred CccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc---c
Q 017000 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 159 (379)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~ 159 (379)
+.+++||+|+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999631 178999999999 9
Q ss_pred eEecCCCCCc-----cccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHH
Q 017000 160 VAKIDPQAPL-----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (379)
Q Consensus 160 ~~~iP~~~~~-----~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~ 233 (379)
++++|+++++ ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999982 2234677899999999888889999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--c---ccCc
Q 017000 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--I---STRP 308 (379)
Q Consensus 234 ~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~---~~~~ 308 (379)
+++++|+++++++.+ .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... . ....
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 999999999999876 678888888776689999999998 6689999999996 99999985422111 0 1111
Q ss_pred c-eeeeccEEEeeecCCCC--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 309 F-QLVTGRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 309 ~-~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
. .+.+++++.++....+. ....+++++++++++.+++. ...+|+++++++|++.+++++.. |+||++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 1 12336677766543321 12346678899999998865 34568999999999999988876 999864
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.7e-38 Score=299.47 Aligned_cols=322 Identities=25% Similarity=0.288 Sum_probs=256.7
Q ss_pred ceeeeeecCCCC--eEEEE-eeCCCCCCCeEEEEEeeeeccccccccccCCCC--------------------CCCCCcc
Q 017000 10 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 66 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 66 (379)
||++++.+++.+ +.+.+ ++.|++.+++|+|||.++++|++|+..+.|..+ ..++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888877654 56654 577788999999999999999999988876542 2356889
Q ss_pred cccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCc
Q 017000 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (379)
Q Consensus 67 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~ 146 (379)
+|||++|+|+++|++++.+++||+|++.+...|+.|..|.. |.. +|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCC-CC------------------
Confidence 99999999999999999999999999988888888765421 110 1111 12
Q ss_pred cceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017000 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 147 g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
|+|++|+.++.+.++++|+++++.+++.+++++.+||+++ ...++++|++|||+|+ |++|++++++|+.+|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 4999999999999999999999999999999999999986 7788999999999998 9999999999999999 68888
Q ss_pred eCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCccc
Q 017000 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI 304 (379)
Q Consensus 226 ~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~ 304 (379)
..++ +++.++++|++.+++... ..+.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ...
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-ccc
Confidence 6655 888889999976665443 33333 445555 89999999998 5689999999996 99999986422 223
Q ss_pred ccCcce-eeeccEEEeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 305 STRPFQ-LVTGRVWKGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 305 ~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.++... +.++.++.++... ....+.++++++.++++++ ++.+.|+++++++|++.+.+++.. |+|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLG---TREVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred cCCHHHhhhcceEEEEeecC---CHHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 344444 3347777776543 2357888999999998874 367889999999999999887765 98885
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.2e-38 Score=297.09 Aligned_cols=291 Identities=20% Similarity=0.250 Sum_probs=234.0
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCC
Q 017000 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRE 101 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 101 (379)
+++.+.|.|+|++|||||||.|+++|+.|+. |.++....|.++|.|++|+|+++|+ .+++||+|+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8899999999999999999999999997654 3222233477999999999999874 69999999732
Q ss_pred CccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEec----CCCCCcccc-cccc
Q 017000 102 CKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLLG 176 (379)
Q Consensus 102 ~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i----P~~~~~~~a-a~l~ 176 (379)
++|++|+.++.+.+.++ |+++++++| ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16899999999988888 899999987 6788
Q ss_pred ccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHH
Q 017000 177 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255 (379)
Q Consensus 177 ~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~ 255 (379)
+++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++++. ..+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHH
Confidence 899999999888899999999999986 9999999999999999 89999899999999999999999988651 24556
Q ss_pred HHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCC---ccccc--Ccce-eeeccEEEeeecCCCC---
Q 017000 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG---QEIST--RPFQ-LVTGRVWKGTAFGGFK--- 326 (379)
Q Consensus 256 ~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---~~~~~--~~~~-~~~~~~i~~~~~~~~~--- 326 (379)
.++..+++++|++||++|+. .+..++++++++ |+++.+|..... ...+. .+.. +++++++.++....+.
T Consensus 199 ~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 66666555899999999984 579999999996 999999864321 11111 1111 2236666666543221
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
....++++++++.++++++. +...|+++++++|++.+++++.. |+|++
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 12467889999999999865 45678999999999999988876 99874
No 85
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7.1e-38 Score=293.85 Aligned_cols=314 Identities=23% Similarity=0.264 Sum_probs=254.9
Q ss_pred cceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
+||++++.+++.+ +.+++++.|.+.+++|+||+.++++|++|+....|..+...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999998875 89999999999999999999999999999998888766555788999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999974210 1 138999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++++++.+++.+.+||.++.+.+.+++|++|+|+|+ |.+|++++|+|+.+|+ +|++++.++++++.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999888888999998877788999999999976 9999999999999999 7899989999999999999999988
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-------ccEE
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-------GRVW 317 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-------~~~i 317 (379)
.++ .++.+.+++.+++ ++|++|||+|+ ..+...+++++++ |+++.+|..... ...+....+.. ...+
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEeccee
Confidence 765 6788888888887 89999999998 5688899999996 999999875321 11111111101 1111
Q ss_pred EeeecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 318 KGTAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.+...........+..+++++.++.+++..++.+.|+++++++|++.+.+++.. |+||+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 111100000011245678899999988655557889999999999999988876 99986
No 86
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.5e-37 Score=287.33 Aligned_cols=300 Identities=28% Similarity=0.471 Sum_probs=250.4
Q ss_pred ceeeeeecCCC-CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPNK-PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~~-~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||++++++++. .+++++++.|++.+++|+||+.++++|++|+....+.......|.++|+|++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 57888887553 49999999999999999999999999999998888765434457899999999999999999999999
Q ss_pred CEEeecCC-cCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 89 d~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
|+|++.+. ..|+.|++|..+..+.|.... ++|.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~------------------g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQ-AD------------------GGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeec-CC------------------CceEEEEEcchHHeEECcCCC
Confidence 99998874 789999999999999998642 23321 22 499999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--eCChhhHHHHHhcCCceEeC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v--~~~~~~~~~~~~lg~~~v~~ 245 (379)
++++++ ++..+.++|+++...++++++++|||.|+|.+|++++|+|+.+|+ +|+++ ..++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999998888899999999998889999999999999999 67766 335568889999999888 7
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~ 323 (379)
+.. .++.+.+.+...+ ++|++||+.|+...+...+++++++ |+++.+|... .....++...++ +++++.|++++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence 765 6788888887776 8999999998777899999999996 9999999864 223444434443 58999998876
Q ss_pred CCCccccHHHHHHHHHcC
Q 017000 324 GFKSRSQVPWLVDKYMKK 341 (379)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~ 341 (379)
+ +++++++++++++|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 4 36799999988764
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.4e-37 Score=293.47 Aligned_cols=312 Identities=23% Similarity=0.315 Sum_probs=254.6
Q ss_pred ceeeeeecCCCC---eEEEEeeCCCCCC-CeEEEEEeeeeccccccccccCCCCCC-C----CCcccccceeEEEEEeCC
Q 017000 10 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 80 (379)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~~VlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~vG~ 80 (379)
|||+++.+++.| +.+++.|.|+|.+ ++|+||+.++++|+.|+..+.|..+.. . .|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 799999999876 8999999998887 999999999999999999888865432 2 577899999999999999
Q ss_pred CCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcce
Q 017000 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (379)
Q Consensus 81 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 160 (379)
++..+++||+|++... . .|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------~------------------~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------G------------------LGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------C------------------CccchheEeccHHHe
Confidence 9999999999985421 0 149999999999999
Q ss_pred EecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh----hhHHHH
Q 017000 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 235 (379)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~----~~~~~~ 235 (379)
+++|+++++++++.+++.+.+||+++.....+++|++|||+|+ |++|++++|+|+++|+ +++++..++ ++++.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999987 9999999999999999 677776655 678888
Q ss_pred HhcCCceEeCCCCCCc---hHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-e
Q 017000 236 KNFGVTEFVNPKDHDK---PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-L 311 (379)
Q Consensus 236 ~~lg~~~v~~~~~~~~---~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~ 311 (379)
+++|+++++++.. . ++...++....+++|++|||+|+. .+...+++++++ |+++.+|..... ...+.+.. +
T Consensus 192 ~~~g~~~~~~~~~--~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~ 266 (341)
T cd08290 192 KALGADHVLTEEE--LRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLI 266 (341)
T ss_pred HhcCCCEEEeCcc--cccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHh
Confidence 9999999988765 3 677777776655899999999985 477789999996 999999864322 22333322 3
Q ss_pred eeccEEEeeecCCCC-------ccccHHHHHHHHHcCCCCCCCceeeee---ecchHHHHHHHHhcCCee-EEEEec
Q 017000 312 VTGRVWKGTAFGGFK-------SRSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 312 ~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~i~~~~---~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
.++.++.+....... ....+.++++++.++.+.+. ....+ +++++++|++.+.+++.. |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 267 FKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 347777776643321 01247778899999998754 34556 999999999999888776 999875
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.9e-37 Score=289.89 Aligned_cols=308 Identities=18% Similarity=0.243 Sum_probs=245.1
Q ss_pred eeeeeecC---CCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCcc
Q 017000 11 KAAVAWEP---NKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 11 ~a~~~~~~---~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
||+++.++ +.+ +++.++|.|++.++||+|||.++++|+.|..++.+..+...+|.++|+|++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57888886 544 8888999999999999999999999999998887765545668899999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC
Q 017000 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
++||+|+.... .. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~---------------------------~~-~~------------------g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD---------------------------ID-RP------------------GSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC---------------------------CC-CC------------------CcccceEEEcHHHcccCCC
Confidence 99999974310 00 12 4999999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEeCChhhHHHHHhc
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~VlI~Ga-g~vG~~a~~la~~~-g~~~vi~v~~~~~~~~~~~~l 238 (379)
++++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999878888877 999999987 99999999999998 99 899998999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee-ccEE
Q 017000 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVW 317 (379)
Q Consensus 239 g~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i 317 (379)
|+++++++.. ++.+.+++...+++|+++|++++...+...+++++++ |+++.++... . ++...+.. +.++
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~~---~--~~~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDPA---E--LDISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEcccc---c--ccchhhhhcceEE
Confidence 9999987643 5667777754448999999987767899999999996 9999885421 1 22222221 2333
Q ss_pred EeeecC--CC---Cc----cccHHHHHHHHHcCCCCCCCceeeee---ecchHHHHHHHHhcCCee-EEEEe
Q 017000 318 KGTAFG--GF---KS----RSQVPWLVDKYMKKEIKVDEYVTHNM---TLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 318 ~~~~~~--~~---~~----~~~~~~~~~~~~~~~i~~~~~i~~~~---~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.+..+. .. .. ...+.++++++.++.+++. +.+.+ +++++++|++.+.+++.. |+|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 332221 00 00 1346788999999988743 33445 468999999999988875 88875
No 89
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.8e-36 Score=285.71 Aligned_cols=315 Identities=24% Similarity=0.303 Sum_probs=249.3
Q ss_pred ceeeeeecCC-CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
|||+++.+++ +.+++++++.|+++++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 7899999985 238899999999999999999999999999998876654 22356789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.....|+ + .+ .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~------------~--------~~---~~------------------g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP------------N--------DP---RN------------------GAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC------------C--------CC---CC------------------CcccceEEechhheEECCCCCC
Confidence 999876543221 0 00 22 4999999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~----------~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+.+++.+++.+.+||+++.+..++ .++++|||+|+ |++|++++++|+.+|+ +|+++. ++++++.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987666544 78999999998 9999999999999999 788776 5688999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhcc--CCceEEEEccCCCCcccccCcceeeecc
Q 017000 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK--GWGTSVIVGVAASGQEISTRPFQLVTGR 315 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 315 (379)
+|+++++++.+ .++.+.+++.+.+++|++||++|++..+..+++++++ + |+++.+|...... .. +.. ....
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~-~~~-~~~~ 269 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EP-RKG-VKVK 269 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cC-CCC-ceEE
Confidence 99999998876 6788888877766899999999986779999999999 8 9999998754321 11 111 1111
Q ss_pred EEEeeecC------CCCccccHHHHHHHHHcCCCCCCCceeeeee--cchHHHHHHHHhcCC-ee-EEEEec
Q 017000 316 VWKGTAFG------GFKSRSQVPWLVDKYMKKEIKVDEYVTHNMT--LGEINEAFRYMHGGD-CL-RCVLKM 377 (379)
Q Consensus 316 ~i~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~--~~~i~~a~~~~~~~~-~~-Kvvl~~ 377 (379)
.+....+. .......+..++++++++.+.+.+ ...++ ++|+++|++.+.+++ .. |+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHP--VRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEeeeecccccccccchHHHHHHHHHHHHcCCccCCC--ceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11111111 111123466788899999988653 35566 999999999999888 65 999874
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2.4e-36 Score=282.83 Aligned_cols=312 Identities=23% Similarity=0.265 Sum_probs=254.4
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCc
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
|||+++.+++.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....|..+. ...|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999887654 677777777789999999999999999999888775432 245788999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
+++||+|++... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------~~~------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------RAG------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------CCC------------------ceeeEEEEEchHHeEeCC
Confidence 999999986421 012 399999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
+++++.+++.+++.+.+|| ++...++++++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4677888999999999986 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeee
Q 017000 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTA 321 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~ 321 (379)
+++.+ .++.+.+.+.+++ ++|+++|++|+.. ...+++++++. |+++.+|...... ..++... +.++.++.+..
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 88766 5677788887776 8999999999854 68999999996 9999998754322 2333222 23366666655
Q ss_pred cCCCC---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 322 FGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
..... ..+.+.+.++++.++.+.. .+.+.|+++++++|++.+.+++.. |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 43221 1235667888898998764 367889999999999999988776 999864
No 91
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.3e-36 Score=285.57 Aligned_cols=311 Identities=23% Similarity=0.289 Sum_probs=252.5
Q ss_pred cceeeeeecCCC----CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 017000 9 TCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (379)
Q Consensus 9 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 83 (379)
+|||+++.+++. ++++++++.|.+.+++|+||+.++++|+.|+....|..+. ..+|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 589999998876 3899999999999999999999999999999988776543 35788999999999999999999
Q ss_pred ccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEec
Q 017000 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 163 (379)
.+++||+|++.. . |+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------~------------------g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------F------------------GAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------C------------------cceeEEEEechHHeEEC
Confidence 999999997531 1 39999999999999999
Q ss_pred CCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce
Q 017000 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
|++ +.+++.+++++.+||+++.+..++++|++|||+|+ |.+|++++|+|+..|+ +|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677788899999999877788999999999986 9999999999999999 7899889999999999999988
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCc---------ccccCcceeee
Q 017000 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ---------EISTRPFQLVT 313 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~---------~~~~~~~~~~~ 313 (379)
+++.++ .++.+.+.....+++|++||++|+ ..+..++++++++ |+++.+|...... ...+....+.+
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 887665 556666666554589999999997 6789999999996 9999998753210 01122222334
Q ss_pred ccEEEeeecCCCC--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 314 GRVWKGTAFGGFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 314 ~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
+.++.++...... ....+.++++++.++.+.+.....+.|+++++++|++.+.+++.. |+|++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 6677666543221 123567788899999888643345668999999999999988766 88874
No 92
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.6e-36 Score=283.76 Aligned_cols=313 Identities=22% Similarity=0.276 Sum_probs=254.9
Q ss_pred cceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCcc
Q 017000 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
||||+++.+++.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....|..+. ...|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 6999999988864 777788888889999999999999999999888775532 2456789999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC
Q 017000 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
++||+|+... .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------PG------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------CC------------------CceeeEEEecHHHcEeCCC
Confidence 9999997431 11 3999999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++.+++.+++++.+||+++.+...+++|++|||+|+ |++|++++++|+.+|+ +++.+.+++++.+.++++|+++++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999899999999877788999999999987 9999999999999999 667788999999999999998888
Q ss_pred CCCCCCch-HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccc-cCcceeee-ccEEEee
Q 017000 245 NPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS-TRPFQLVT-GRVWKGT 320 (379)
Q Consensus 245 ~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~~~~-~~~i~~~ 320 (379)
++.. .+ +.+.+++.+.+ ++|++||+.++ ..+..++++++++ |+++.+|.... .... ++...++. +.++.++
T Consensus 191 ~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (334)
T PTZ00354 191 RYPD--EEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFS 265 (334)
T ss_pred ecCC--hhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEee
Confidence 8765 33 77788888766 89999999987 6789999999996 99999986432 2211 33333333 4466665
Q ss_pred ecCCCCc-------cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 321 AFGGFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 321 ~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
....... ...++++++++.++.+.+ .+.+.+++++++++++.+.+++.. |+|+.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 266 TLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred eccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 5433111 012466778888888774 367889999999999999987765 9999875
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=5.7e-36 Score=280.46 Aligned_cols=313 Identities=22% Similarity=0.274 Sum_probs=242.9
Q ss_pred ceeeeeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.++++ ++++++.|.|.+.+++|+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 78999999886 59999999999999999999999999999999888875432 45788999999999999 456899
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+. .+|.. .+ |+|++|+.++++.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~-~~------------------g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMN-TD------------------GGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCC-CC------------------ceeEEEEEEchhhEEECCCC
Confidence 9999986421 01111 22 49999999999999999999
Q ss_pred CCccccccccccchhhcchhhhcc--CCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTA--KVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~--~~~-~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
+++.+++.+++.+.++|.++.... ++. .+++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999998875443 335 3579999998 9999999999999999 7999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeee
Q 017000 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 321 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~ 321 (379)
+++..+ . .....+....+++|++||++|+ ..+..++++++++ |+++.+|..... ...+.+..+ .++.++.+..
T Consensus 195 ~~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 195 VLDRED--L-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGID 268 (325)
T ss_pred EEcchh--H-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEE
Confidence 887654 2 1122233333389999999998 5699999999996 999999975432 224444444 3577777765
Q ss_pred cCCCCc---cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 322 FGGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~~---~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
...... ...++.+.+++..+... .+..+|+++|+++|++.+.+++.. |+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 269 SVNCPMELRKQVWQKLATEWKPDLLE---IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eecCchhHHHHHHHHHHHHHhcCCcc---ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 443211 11223344444455222 367899999999999999988876 999864
No 94
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.6e-37 Score=283.37 Aligned_cols=301 Identities=28% Similarity=0.414 Sum_probs=230.4
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCC----CCcccccceeEEE---EEeC-CCCCccCCCCEEee
Q 017000 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL----FPCILGHEAAGIV---ESVG-EGVTEVQPGDHVIP 93 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~----~p~~~G~e~~G~V---~~vG-~~v~~~~~Gd~V~~ 93 (379)
....+.++|.|.+++++|++.++++|+.|+.++.|.+.... +|.++++++.|++ ...| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 45577899999999999999999999999999998876553 6755555555553 3334 22334555555532
Q ss_pred cCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccc
Q 017000 94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173 (379)
Q Consensus 94 ~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa 173 (379)
. ...|+|+||+.+|...++++|+++++.+||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 123499999999999999999999999999
Q ss_pred cccccchhhcchhhhcc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 174 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 174 ~l~~~~~ta~~al~~~~------~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+..|||.+++... ++++|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 9999999999977 9999999999999996 45555599999999999999999999
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC---CCcccccCcceeeec-----cEEE
Q 017000 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA---SGQEISTRPFQLVTG-----RVWK 318 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~---~~~~~~~~~~~~~~~-----~~i~ 318 (379)
++ .++.+.+++.+.+++|+||||+|+. .......++... |+...++... .+.... ..+..+.. ..+.
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 284 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLK 284 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccc-cchhhhhhhhheeeeee
Confidence 98 8999999999844999999999995 477777778885 7655554432 111111 00000011 1111
Q ss_pred e---eecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecCC
Q 017000 319 G---TAFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 379 (379)
Q Consensus 319 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~~ 379 (379)
+ .+.......+.+..+.+++++++|+ +.+++.||++++.+|++.+.+++.. |+++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~ie~gkik--p~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 285 GVNYRWLYFVPSAEYLKALVELIEKGKIK--PVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred ccceeeeeecCCHHHHHHHHHHHHcCccc--CCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 1 1111123456788899999999777 4589999999999999999997766 99998763
No 95
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.8e-36 Score=279.97 Aligned_cols=330 Identities=25% Similarity=0.380 Sum_probs=265.7
Q ss_pred ceeeeeecCCC--CeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++...+. .+.+.+.+.|.+++++|+|++.++++|++|+....|..+.. ..|.++|||++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 78999986653 38888888888899999999999999999999887765432 4678899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.....|+.+.+| .|.... ++|.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~---~~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPT------AEDEAS---ALGGP-ID------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEeccccccccccc------cccccc---ccccc-cC------------------ceeeeEEEecHHHeEECCCC
Confidence 9999998776666544433 332211 12211 23 49999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
+++.+++.+++.+.+||+++...+.+++|++|+|+|+|++|++++++|+.+|+ +|++++.++++++.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998777889999999999889999999999999999 79999899999999999999998876
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 324 (379)
.. ..++.+.+++.+++ ++|+++|+.+. ..+..++++++++ |+++.+|....... ...... +.++.++.+.....
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RT-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEA-PVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred Cc-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCcc-CcCHHHHhhcceEEEEEecCc
Confidence 53 14577778888876 99999999986 6689999999996 99999987543211 222222 33477777776543
Q ss_pred CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 325 FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
...++++++++.++.+.+. ..+.|++++++++++.+.+++.. |+++++
T Consensus 288 ---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 ---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred ---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3578888899988877643 46889999999999999888766 988763
No 96
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.4e-35 Score=277.67 Aligned_cols=298 Identities=19% Similarity=0.286 Sum_probs=248.5
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCC
Q 017000 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 100 (379)
+.+++.+.|++.+++|+||+.++++|+.|...+.+.... ...|.++|||++|+|+.+|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999888776533 246789999999999999999999999999985421
Q ss_pred CCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccch
Q 017000 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180 (379)
Q Consensus 101 ~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 180 (379)
+ |+|++|+.++.+.++++|+++++.+++.+++...
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 2 3899999999999999999999999999988999
Q ss_pred hhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHH
Q 017000 181 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259 (379)
Q Consensus 181 ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~ 259 (379)
+||+++.+...+.+|++|||+|+ |++|++++|+|+.+|+ +++++.+++++++.++++|+++++++.+ .++...+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99998877788899999999988 9999999999999999 7888888899999999999999998876 567888888
Q ss_pred hcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceee-eccEEEeeecCCCCc-------ccc
Q 017000 260 LTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRVWKGTAFGGFKS-------RSQ 330 (379)
Q Consensus 260 ~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-------~~~ 330 (379)
.+++ ++|++|||.|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.+.....+.. ...
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8887 9999999999954 67889999996 999999875432 3344444444 467777666543321 134
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 331 VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 331 ~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
+.++++++.++.+.+. +.+.|+++++++|++.+.+++.. |+|++
T Consensus 279 ~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 279 FAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 6778888889988753 57889999999999999987765 88864
No 97
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.4e-35 Score=275.37 Aligned_cols=311 Identities=26% Similarity=0.407 Sum_probs=248.7
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||++++...+.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 688888877653 77778888888999999999999999999998888765556688999999999999995 57999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.... +|.. .+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGRT-FD------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCCC-CC------------------cccceEEEcCHHHcEeCCCCC
Confidence 9999865320 1100 22 499999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++++++.+++++.+||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++..++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999888888999999999988 9999999999999999 79999899999999999999888754
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCccc-ccCcce---eeeccEEEeeec
Q 017000 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEI-STRPFQ---LVTGRVWKGTAF 322 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~-~~~~~~---~~~~~~i~~~~~ 322 (379)
. .++.+.+++. .+++|+++|++|+ ..+..++++++++ |+++.+|........ ...... +.+++++.++..
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 3 4667777777 4489999999998 6699999999996 999999874322111 111111 123555555443
Q ss_pred CCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
... ....+..++++++++.+++. ..+.|+++|+++|++.+.+++.. |+|+
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDV-PQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-hHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 221 12357788899999988753 56889999999999999888765 8775
No 98
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=4.7e-35 Score=272.67 Aligned_cols=303 Identities=24% Similarity=0.303 Sum_probs=242.5
Q ss_pred ecCCCCeEEEEeeCCCCCCCeEEEEEeeeeccccccccc-cCCCCC--CCCCcccccceeEEEEEeCCCCCccCCCCEEe
Q 017000 16 WEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92 (379)
Q Consensus 16 ~~~~~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 92 (379)
+++++ +++.+++.|++.+++|+||+.++++|+.|+..+ .|..+. ...|.++|+|++|+|+.+|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34555 999999999999999999999999999999887 665322 12477899999999999999999999999998
Q ss_pred ecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCcccc
Q 017000 93 PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172 (379)
Q Consensus 93 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~a 172 (379)
+.. .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 542 1389999999999999999998 233
Q ss_pred ccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCch
Q 017000 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252 (379)
Q Consensus 173 a~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~ 252 (379)
+.+..+++++++++. .+++++|++|||+|+|.+|++++|+|+.+|+++|+++.+++++.++++++|++++++.+. .+
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~ 185 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EA 185 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cC
Confidence 322257788888764 788999999999988999999999999999944999988999999999999998888665 67
Q ss_pred HHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecCCC-Cccc
Q 017000 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFGGF-KSRS 329 (379)
Q Consensus 253 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~-~~~~ 329 (379)
+.+.+.+.+++ ++|+++||+|....+..++++++++ |+++.+|... .....+.+.. .+.+..+.+...... ....
T Consensus 186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (312)
T cd08269 186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE 263 (312)
T ss_pred HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence 88888888877 9999999998877899999999996 9999998653 2222333222 223555554432221 1235
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEe
Q 017000 330 QVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDC--LRCVLK 376 (379)
Q Consensus 330 ~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~--~Kvvl~ 376 (379)
.+++++++++++.+.+.+.+.+.|+++++++|++.+.+++. .|+++.
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 312 (312)
T cd08269 264 GMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVIV 312 (312)
T ss_pred HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEeC
Confidence 78889999999998865556788999999999999998864 498873
No 99
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.9e-35 Score=273.29 Aligned_cols=297 Identities=21% Similarity=0.237 Sum_probs=240.8
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||++++.+.+ | +++.+.+.|.+.+++|+||+.++++|+.|+....+. ..|.++|||++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 6888888754 4 777788999999999999999999999998876521 23568999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|+... .+ |+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------AM------------------GAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------CC------------------cceeeEEEEchHHeEECCCCC
Confidence 99997531 12 399999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++.+++.+++.+.+||+++.+.... +|++|+|+|+ |++|++++++|+.+|+ +|+.+.+++++.+.++++|++.++..
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999987555544 6999999988 9999999999999999 89999899999999999998766543
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeee---ccEEEeeecC
Q 017000 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVT---GRVWKGTAFG 323 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~---~~~i~~~~~~ 323 (379)
.. +..++++|+++|++|+. .+..++++++.+ |+++.+|... .....+++..+.. +.++.++.+.
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 12224799999999984 689999999996 9999998754 2223333333333 6777776654
Q ss_pred C-CCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 324 G-FKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~-~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
. ......+..+++++.++++.+. +.+.++++++++|++.+.+++.. |+|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 3 1123467889999999999854 67889999999999999988876 999864
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.2e-34 Score=271.37 Aligned_cols=311 Identities=23% Similarity=0.272 Sum_probs=240.9
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccCC
Q 017000 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||+++.+.+.| ++++++|.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+. +.+..+++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 67888887765 789999999999999999999999999999888886533 24588899999999998 55678999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.+.. .|.. .+ |+|++|+.+|.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-HD------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-CC------------------ccceEEEEEchhheEECCCCC
Confidence 9999865310 1110 22 399999999999999999999
Q ss_pred Cccccccccccchhhcchhh--hccCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE
Q 017000 168 PLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~--~~~~~~~g~-~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
++++++.+++.+.+|+.++. ..+.+.+|+ +|||+|+ |++|++++|+|+.+|+ +++++..++++++.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 99999999988889887753 334488898 9999998 9999999999999999 78877788888899999999888
Q ss_pred eCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeec
Q 017000 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAF 322 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~ 322 (379)
++..+ .+. .++....+++|+++||+|+. .+..++++++++ |+++.+|.... ...+++...+ .++.++.+...
T Consensus 195 ~~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred Ecccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 87654 222 44455555799999999984 689999999996 99999997532 2233332333 34777777554
Q ss_pred CCCCc---cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 323 GGFKS---RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 323 ~~~~~---~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
..... ...+..+.+++..+.+.. . .+.|+++++++|++.+.+++.. |+|+.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 32111 112445556666777653 2 5689999999999999988876 998863
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.1e-34 Score=271.99 Aligned_cols=314 Identities=19% Similarity=0.248 Sum_probs=238.6
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCC-CCCCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.+++++ +.++++|.|.+.+++|+||+.++++|++|.....+.. ....+|.++|||++|+|+++| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789999988774 8889999999999999999999999999987654321 122458899999999999965 46799
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+.. .|.. .+ |+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 99999865320 1111 23 39999999999999999999
Q ss_pred CCccccccccccchhhcchhhhc--cC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNT--AK-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~--~~-~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
+++++++.+++++.|||.++... .. ..++++|||+|+ |++|++++|+|+.+|+ +|+++.+++++++.++++|+++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998876432 23 345789999988 9999999999999999 8999999999999999999998
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeee
Q 017000 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 321 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~ 321 (379)
+++.++ . ..+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|.... ...++.+..+ .++.++.+..
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence 888765 2 3455666654489999999998 6689999999996 99999997532 2233333333 3477777764
Q ss_pred cCCCCccccHHHHHHHHHcCCCCC---CCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 322 FGGFKSRSQVPWLVDKYMKKEIKV---DEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~i~~---~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
..... .....++++.+.. .+.+ ...+.++|+++++++|++.+.+++.. |+|+++
T Consensus 269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 32110 0122334333332 2221 12357899999999999999988876 998864
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1e-34 Score=273.30 Aligned_cols=312 Identities=19% Similarity=0.198 Sum_probs=249.6
Q ss_pred ceeeeeecCCCC-----eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 017000 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
|||+++.+++.+ ++..+++.|++.+++|+||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999998874 556678888889999999999999999999888776554456778999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
+++||+|+..... . .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~-------------------------~---~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDI-------------------------T---RP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCC-------------------------C---CC------------------ccceEEEEEchHHeeeCC
Confidence 9999999753110 0 12 399999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHh
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~VlI~Ga-g~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~ 237 (379)
+++++++++.+++.+.+||+++.+.+.+++ |++|+|+|+ |++|++++|+|+.+| + +|++++.++++.+.+++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998878788887 999999986 999999999999999 7 89999899999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccE
Q 017000 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRV 316 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~ 316 (379)
+|++++++... ++.+.++....+++|++||++|....+..++++++++ |+++.+|... ..++...+ .++.+
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcccce
Confidence 99998887653 4555565443348999999999767899999999996 9999998642 22233333 34666
Q ss_pred EEeeecCCCC---------ccccHHHHHHHHHcCCCCCCCc-eeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 317 WKGTAFGGFK---------SRSQVPWLVDKYMKKEIKVDEY-VTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 317 i~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~~-i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
+.+..+.... ....+.++++++.++.+.+... ....++++++++|++.+.+++.. |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 6654432210 0123677889999998885321 12457999999999999988876 88874
No 103
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.7e-35 Score=276.19 Aligned_cols=311 Identities=23% Similarity=0.273 Sum_probs=240.5
Q ss_pred ceeeeeecCCCC---eEEEEeeCCCC-CCCeEEEEEeeeeccccccccccCCCC---------------CCCCCcccccc
Q 017000 10 CKAAVAWEPNKP---LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 70 (379)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~~VlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 70 (379)
|||+++.++++| ++++|++.|+| .+++|+||+.++++|++|+....|... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999888886 89999999999 499999999999999999988877421 23558899999
Q ss_pred eeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCcccee
Q 017000 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (379)
Q Consensus 71 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a 150 (379)
++|+|+.+|++++++++||+|++.+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999864320 1124999
Q ss_pred eeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017000 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 151 ~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~----g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
+|+.++.+.++++|+++++.+++.+++.+.+||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998777776654 999999986 9999999999999999 78877
Q ss_pred eCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--
Q 017000 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-- 303 (379)
Q Consensus 226 ~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-- 303 (379)
.++ ++.+.++++|++.+++..+ .++.+.+... +++|++||++|.. ....++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCccccccc
Confidence 654 6788889999988887765 4555544432 3799999999985 689999999996 99999986432111
Q ss_pred ccc--Ccc----eeee-ccE-E-Eee---ecCCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee
Q 017000 304 IST--RPF----QLVT-GRV-W-KGT---AFGGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL 371 (379)
Q Consensus 304 ~~~--~~~----~~~~-~~~-i-~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~ 371 (379)
... .++ .+.. ... + ... +.........+.++++++.++.+.+ .+.+.|+++++++|++.+.+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~ 344 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHAR 344 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCc
Confidence 111 000 0000 000 0 000 0000112346888999999998764 367889999999999999887765
Q ss_pred -EEEEe
Q 017000 372 -RCVLK 376 (379)
Q Consensus 372 -Kvvl~ 376 (379)
|++++
T Consensus 345 ~~vv~~ 350 (350)
T cd08248 345 GKTVIK 350 (350)
T ss_pred eEEEeC
Confidence 88864
No 104
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=9.2e-34 Score=268.69 Aligned_cols=317 Identities=19% Similarity=0.225 Sum_probs=236.4
Q ss_pred eeeeeecCCCCeEEEEeeCCCC---CCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCC-cc
Q 017000 11 KAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT-EV 85 (379)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~p~~---~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~-~~ 85 (379)
|++++.+++.|+++++++.|.| ++++|+||+.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999998888888887766 89999999999999999988765432221 2377899999999999999998 89
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc----ceE
Q 017000 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SVA 161 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~ 161 (379)
++||+|++.....|+ . .|+|++|+.++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~~--------------------------~------------------~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPYG--------------------------G------------------QGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCCC--------------------------C------------------CceeeEEEEEccccccceeE
Confidence 999999865321110 1 2499999999987 799
Q ss_pred ecCCCCCccccccccccchhhcchhhhcc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHhc
Q 017000 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF 238 (379)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~-~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~l 238 (379)
++|+++++.+++.+++++.+||+++.+.. ++++|++|||+|+ |++|++++|+|+.+|. ++++++. ++++++.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999988 8999999999999854 3677775 45556688899
Q ss_pred CCceEeCCCCCCch---HHHH-HHHhcCC-CccEEEEcCCCHHHHHHHHHHhc---cCCceEEEEccCCCCccc--c---
Q 017000 239 GVTEFVNPKDHDKP---IQQV-LVDLTDG-GVDYSFECIGNVSVMRAALECCH---KGWGTSVIVGVAASGQEI--S--- 305 (379)
Q Consensus 239 g~~~v~~~~~~~~~---~~~~-i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~---~~~G~iv~~g~~~~~~~~--~--- 305 (379)
|++++++.++ .+ +... ++..+++ ++|++|||+|+...+..++++++ ++ |+++.++........ .
T Consensus 197 g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~ 273 (352)
T cd08247 197 GADHFIDYDA--HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNS 273 (352)
T ss_pred CCCEEEecCC--CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhh
Confidence 9999988765 33 4333 4444424 89999999998667889999999 96 999987422111000 0
Q ss_pred -----cCcceeeeccEEEeeec---CCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 306 -----TRPFQLVTGRVWKGTAF---GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 306 -----~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
.....+....++....+ ........+.++++++.++.+++ .+.+.|+++++++|++.+.+++.. |+|++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 00111111111111100 00011235777889999998764 367889999999999999988765 99886
Q ss_pred c
Q 017000 377 M 377 (379)
Q Consensus 377 ~ 377 (379)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 3
No 105
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3e-33 Score=262.01 Aligned_cols=312 Identities=18% Similarity=0.239 Sum_probs=242.5
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++.++|.+ ++++++|.|+|.+++|+||+.++++|++|.....|..+. ..+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 789999988853 889999999999999999999999999999888776432 23577899999999999 7778899
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.... .|. +..|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VGE-------------------RHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CCC-------------------CCCCcceeEEEEchHHeeeCCCC
Confidence 99999864210 000 01249999999999999999999
Q ss_pred CCccccccccccchhhcchhh--hccCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce
Q 017000 167 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~--~~~~~~-~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~ 242 (379)
+++++++.+++.+++++.++. +..+.. +|++|||+|+ |++|++++|+|+.+|+ +++++.+++++.+.++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999988888876643 223445 6789999998 9999999999999999 7888889999999999999999
Q ss_pred EeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeee
Q 017000 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTA 321 (379)
Q Consensus 243 v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~ 321 (379)
++++++ ....++..+.+++|.++|++++ ..+...+..++.+ |+++.+|.... ....+++..+ .++.++.+..
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 988754 2224555555578999999998 4577888888985 99999987532 2222333333 4477777765
Q ss_pred cCCCC---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 322 FGGFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 322 ~~~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
..... ....+..+++++.++.+++ +.+.++++|+++|++.+.+++.. |+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 33221 1223555666777787753 36889999999999999988876 998864
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2e-33 Score=262.06 Aligned_cols=309 Identities=24% Similarity=0.320 Sum_probs=251.9
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++.+.+.+ +++.+.+.|.+.+++|+||+.++++|+.|+....+..+. ..+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999886654 778888888889999999999999999999888775533 24678999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL-------------------------------AG------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec-------------------------------CC------------------CceeEEEEcCHHHhccCCCC
Confidence 999997531 11 38999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.++..+.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999899999998877788999999999997 9999999999999999 7999989999999999999988887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
... .++.+.+.+.+.+ ++|+++|++|+.. +...+++++++ |+++.+|..... ...+....+ .++.++.++...
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeecc
Confidence 765 5677777777766 8999999999854 88899999996 999999865322 123333333 347777776654
Q ss_pred CCCc-------cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 324 GFKS-------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 324 ~~~~-------~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
.... ...+.++++++.++++.+ ...+.|+++++++|++.+.+++.. |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 3211 112456777888888764 367889999999999999887765 7764
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=3e-33 Score=261.27 Aligned_cols=314 Identities=24% Similarity=0.340 Sum_probs=251.5
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++..++.+ +.+.++|.|.+.+++|+|++.++++|++|+....|..+. ...|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888876654 888899999999999999999999999999888776542 35688999999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++..+.. ++ .. |++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~~-----------------------~~---~~------------------g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLGW-----------------------GR---RQ------------------GTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEecccc-----------------------CC---CC------------------cceeeEEEecHHHcEeCCCC
Confidence 999998754200 00 12 39999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++++.+||+++....++.+|++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999987 9999999999999999 8999989999999999999998887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcce-eeeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQ-LVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 323 (379)
... .++.+.+.+.+.+ ++|+++|+++.. .....++++++. |+++.+|.... ...+++.. +..+.++.+....
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGGL--RGTIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecCC--cCCCChhHHHhcCceEEeeehh
Confidence 765 5677777777666 899999999984 478889999996 99999987532 22222222 2235555554432
Q ss_pred CCC---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 324 GFK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 324 ~~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
... ....+..+.+++.++.+++. ..+.|++++++++++.+.+++.. |++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~ 324 (325)
T cd08253 270 TATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLD 324 (325)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 211 11234456667777777643 56889999999999999987766 98875
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.3e-33 Score=260.21 Aligned_cols=308 Identities=27% Similarity=0.358 Sum_probs=248.8
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCC
Q 017000 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 88 (379)
||+.+..++.+ +.+.+.+.+.+.+++|+|++.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46677666654 667777777788999999999999999999888776543 457789999999999999999999999
Q ss_pred CEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCC
Q 017000 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (379)
Q Consensus 89 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~ 168 (379)
|+|++.. .. |+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------PP------------------GAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------CC------------------CceeEEEEecHHHceeCCCCCC
Confidence 9997531 01 3899999999999999999999
Q ss_pred ccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCC
Q 017000 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 169 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~ 247 (379)
+.+++.+++...++|+++.+..++.+|++|||+|+ |++|++++++|+.+|+ +|+++..++++.+.++++|++++++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999888899999998877788999999999996 9999999999999999 899998999999999999999888776
Q ss_pred CCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecCCC
Q 017000 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFGGF 325 (379)
Q Consensus 248 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 325 (379)
+ .++.+.+.+.+.+ ++|+++||.++ ..+..++++++++ |+++.+|..... ...+++..+ .++.++.+......
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 5 6777888888776 89999999998 5689999999996 999999875322 122222222 23555544332221
Q ss_pred C-c----cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 326 K-S----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 326 ~-~----~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
. . ...+.++++++.++.+.+. ..+.|+++++++|++.+.+++.. |+|++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 1 1 1234567888888887754 56789999999999999988776 88875
No 109
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.8e-33 Score=244.39 Aligned_cols=298 Identities=24% Similarity=0.299 Sum_probs=239.9
Q ss_pred eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeC--CCCCccCCCCEEeecCCcCC
Q 017000 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAEC 99 (379)
Q Consensus 22 ~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~~~ 99 (379)
++++|+++|+|++|+||||+.|.++.|....-++ ..+..-.|+-+|...+|.++... |+.+.|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~-d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS-DAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeeccc-CCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 9999999999999999999999999984333222 22333346777776666555443 667889999999632
Q ss_pred CCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccc--cccc
Q 017000 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC--LLGC 177 (379)
Q Consensus 100 ~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa--~l~~ 177 (379)
.+|++|..++.+.+.|++++.-+..+. .+..
T Consensus 101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 189999999999999998765444433 3667
Q ss_pred cchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEeCCCCCCchHHH
Q 017000 178 GVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQ 255 (379)
Q Consensus 178 ~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~ 255 (379)
+..|||.+|++.++.++|++|+|.|| |++|..+.|+||..|+ +|+++..+++|.+++++ +|.|.++||+. +++.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~ 210 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQ 210 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHH
Confidence 89999999999999999999999987 9999999999999999 99999999999999998 99999999998 79999
Q ss_pred HHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC--CcccccCcce---eee-ccEEEeeecCC-CC--
Q 017000 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS--GQEISTRPFQ---LVT-GRVWKGTAFGG-FK-- 326 (379)
Q Consensus 256 ~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~~~~~~~~~---~~~-~~~i~~~~~~~-~~-- 326 (379)
.+.+..+.|+|+.||++|+ +.+...+..|+.. +|++.+|..+. +...++.+.. ++. .+++.|+.... +.
T Consensus 211 ~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~ 288 (340)
T COG2130 211 ALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR 288 (340)
T ss_pred HHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence 9999998899999999999 6699999999995 99999997642 1112222221 222 77788887632 21
Q ss_pred ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecCC
Q 017000 327 SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQD 379 (379)
Q Consensus 327 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~~ 379 (379)
..+..+++..++++|+|+..+ +-+-.||.+++||.-|.+++.. |.|+++.+
T Consensus 289 ~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 289 FPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 124577899999999999874 3334799999999999999987 99999864
No 110
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.3e-33 Score=259.94 Aligned_cols=311 Identities=23% Similarity=0.320 Sum_probs=250.4
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+++..++.+ +.+.+.+.|.+.+++|+|++.++++|++|+....+.... ...|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999988876 788888888889999999999999999999887775432 23577899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|+..... ++ .. .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~------------------------~~--~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAGG------------------------LG--GL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccCC------------------------cC--CC------------------CCceeEEEEecHHHcccCCCC
Confidence 99999864310 00 01 248999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++.+.+||+++.+..++++|++|+|+|+ |++|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999899999998878889999999999986 9999999999999999 78888787 8889999999988887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 324 (379)
... . +.+.+.+.+.+ ++|+++|++++ ..+...++++++. |+++.+|... ........ .++.++.+.....
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~~-~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA---THDLAPLS-FRNATYSGVFTLL 265 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC---ccchhhHh-hhcceEEEEEccc
Confidence 755 4 77788888877 89999999998 4588899999996 9999998653 11211111 2355555554321
Q ss_pred --C------CccccHHHHHHHHHcCCCCCCCcee-eeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 325 --F------KSRSQVPWLVDKYMKKEIKVDEYVT-HNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 --~------~~~~~~~~~~~~~~~~~i~~~~~i~-~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
. .....+..+++++.++.+.+. ++ +.|++++++++++.+.+++.. |+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 1 012356778888888887643 34 889999999999999887765 998864
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-33 Score=258.71 Aligned_cols=314 Identities=23% Similarity=0.304 Sum_probs=247.6
Q ss_pred ceeeeeecCC--CCeEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCC
Q 017000 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
|||+++.+++ +.+.++++|.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999999 34999999999999999999999999999999887776543344778999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++.... + .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~-------------------------~---~~------------------~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL-------------------------A---RG------------------GSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC-------------------------C---CC------------------ccceeEEEeCHHHeEECCCCC
Confidence 9999864310 0 12 389999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++.+++.+++.+.+|++++.+.+++.+|++|+|+|+ |++|++++++|+..|+ +|+.+. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999888888999999999998 8999999999999999 777775 6778888899999888877
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc-cccCcceeeeccEEEeeecCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE-ISTRPFQLVTGRVWKGTAFGG 324 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~ 324 (379)
.. .++.+.+.+...+ ++|++++++++.. ....++++++. |+++.+|....... ..+.....++.+.+.......
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHG 268 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEeccccccc
Confidence 65 5677778877776 8999999999854 67789999996 99999975432111 011101111233333222111
Q ss_pred C-----CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 325 F-----KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 325 ~-----~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
. ...+.+.++++++.++.+.+. ..+.|+++++.+|++.+.+++.. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 269 DPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred chhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 1 111235678888888887643 45889999999999999987765 988763
No 112
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.3e-33 Score=259.75 Aligned_cols=305 Identities=25% Similarity=0.324 Sum_probs=239.8
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCccCC
Q 017000 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
||+++...+.+ +++.+++.|.|.+++|+|++.++++|+.|+..+.|..+.. ++|.++|||++|+|+.+|++++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887765 8889999999999999999999999999999888765432 56889999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|++... + |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------V------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------C------------------cceeeEEEechHHeEECCCCC
Confidence 999975421 1 389999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~ 246 (379)
++.+++.+++++.+||+++.+.+++.+|++|+|+|+ |++|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999998877788999999999987 9999999999999999 7888877 88899999999754 444
Q ss_pred CCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcc--cccCcc-----------eeee
Q 017000 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE--ISTRPF-----------QLVT 313 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~~~~~~-----------~~~~ 313 (379)
.. .++... ....+++|+++||+|+.. +..++++++++ |+++.+|....... +.+.+. ....
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 33 333333 233348999999999865 88999999996 99999987543221 111110 1111
Q ss_pred --ccEEEeeecCCC----CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 314 --GRVWKGTAFGGF----KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 314 --~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
..+......... .....+.+++++++++.+.+ .+.+.|+++++++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 222222221100 11245778889999998874 367889999999999998887765 8775
No 113
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=5.3e-33 Score=260.95 Aligned_cols=304 Identities=22% Similarity=0.257 Sum_probs=238.4
Q ss_pred eeeeeecCCC----C--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCC
Q 017000 11 KAAVAWEPNK----P--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG 81 (379)
Q Consensus 11 ~a~~~~~~~~----~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~ 81 (379)
||+++.+.++ + ++++++|.|++.+++|+||+.++++|+.|.....+... ....+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 5666755442 1 89999999999999999999999999987655444321 1123457899999999999964
Q ss_pred CCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecC-cce
Q 017000 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 160 (379)
Q Consensus 82 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~ 160 (379)
.+++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999631 27999999999 999
Q ss_pred EecCCCCC--cccccc-ccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH
Q 017000 161 AKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 161 ~~iP~~~~--~~~aa~-l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
+++|++++ +.+++. +++++.+||+++.+.+.+.++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999985 445555 88899999999878788999999999986 9999999999999999 8999989999999998
Q ss_pred h-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccc----c-Ccce
Q 017000 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEIS----T-RPFQ 310 (379)
Q Consensus 237 ~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~----~-~~~~ 310 (379)
+ +|+++++++++ .++.+.+.+.+.+++|++|||+|+ ..+..++++++++ |+++.+|......... + ....
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI 263 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence 8 99999998876 567777777765589999999998 6699999999996 9999998654321111 1 1122
Q ss_pred eeeccEEEeeecCCCCc--cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 311 LVTGRVWKGTAFGGFKS--RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 311 ~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
+.++.++.+..+..... ...+.++++++.++.+++.+ ...++++|+++|++.+.+++.. |+|+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 33466776665433211 23467788999999988653 3558999999999999887765 7764
No 114
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.9e-33 Score=254.86 Aligned_cols=268 Identities=32% Similarity=0.471 Sum_probs=219.0
Q ss_pred eEEEEEeeeeccccccccccCCCC-CCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCC
Q 017000 36 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (379)
Q Consensus 36 ~VlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 114 (379)
||+|++.++++|+.|+..+.|..+ ....|.++|+|++|+|+++|++++.+++||+|++.+...|+.|.+|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999888765 335678999999999999999999999999999999999999999997 666
Q ss_pred CccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCC
Q 017000 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (379)
Q Consensus 115 ~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~ 194 (379)
.... .+.. . .|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+++
T Consensus 77 ~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LGEG-L------------------DGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---eccc-c------------------CCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 5442 1111 2 2499999999999999999999999999999999999999877777799
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCC
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 273 (379)
+++|||+|+|++|++++++++.+|. +|+++++++++.+.++++|++++++..+ .++.+.+. ...+ ++|+++|+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999996699999999999998 8999999999999999999988887765 55555555 4444 8999999999
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCccccHHHHHHH
Q 017000 274 NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 337 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 337 (379)
....+..++++++++ |+++.+|..............+.+++++.++..+.. .++++++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 866689999999996 999999876443222222223344777777765432 356666554
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.7e-32 Score=253.06 Aligned_cols=315 Identities=28% Similarity=0.398 Sum_probs=249.5
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
||++++...+.+ +.+.+.+.|.+.+++|+|++.++++|+.|+.+..+..... .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 688888876653 7777888888899999999999999999998887764332 4577899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|++.+...+ + .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~-----------------------~---~~------------------g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAADL-----------------------G---QY------------------GTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEecccccc-----------------------C---CC------------------ccceEEEEechHhcEeCCCC
Confidence 9999987543110 0 12 39999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.+++.+.++|+++.....+.++++|+|+|+ |.+|++++++++..|+ +++.+.+++++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877888999999999988 9999999999999999 8888888999999999999988887
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcc-eeeeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPF-QLVTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~ 323 (379)
.+. .++.+.+.+.+.+ ++|+++++.|+ .....++++++++ |+++.+|.... ....+... .+.++.++.+..+.
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecc
Confidence 765 5677777777766 89999999998 5688899999996 99999986533 11222222 23346666665443
Q ss_pred CCC-cccc----HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 324 GFK-SRSQ----VPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 324 ~~~-~~~~----~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
... ...+ +..+.+++.++.+.+. ....|++++++++++.+.+++.. |+|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 211 1122 3344555667776643 56789999999999999887765 88875
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=5.8e-32 Score=252.66 Aligned_cols=311 Identities=23% Similarity=0.307 Sum_probs=251.8
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccC
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 86 (379)
|||+.+..++.+ +.+.+.+.|.+.+++|+||+.++++|+.|+....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888887765 667777777788999999999999999999887765433 24578899999999999999999999
Q ss_pred CCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCC
Q 017000 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (379)
Q Consensus 87 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~ 166 (379)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV-------------------------------AG------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc-------------------------------CC------------------CcceeEEEecHHHcEeCCCC
Confidence 999997531 11 38999999999999999999
Q ss_pred CCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC
Q 017000 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~ 245 (379)
+++.+++.++.++.++|+++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998888889999999999987 9999999999999999 8889988999999999999888877
Q ss_pred CCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCccee-eeccEEEeeecC
Q 017000 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQL-VTGRVWKGTAFG 323 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 323 (379)
... .++...+.....+ ++|+++|++|+ ..+..++.+++++ |+++.+|....... .+++..+ .++.++.+....
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 655 5677778777776 89999999998 4688899999996 99999987432211 3333333 447777777654
Q ss_pred CC-Cc------cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 324 GF-KS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 324 ~~-~~------~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
.. .. ...+.++++++.++.+.+ ..++.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 32 11 112355677888888764 367889999999999998887765 888763
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3.1e-32 Score=252.17 Aligned_cols=292 Identities=24% Similarity=0.364 Sum_probs=233.4
Q ss_pred CCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccC
Q 017000 29 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 107 (379)
Q Consensus 29 ~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 107 (379)
.|++.+++|+||+.++++|+.|+..+.+..+. ..+|.++|+|++|+|+++|++++++++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57788999999999999999999988876543 2568899999999999999999999999999864210
Q ss_pred CCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccchhhcchhh
Q 017000 108 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187 (379)
Q Consensus 108 ~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~ 187 (379)
.+ |+|++|+.++.+.++++|+++++.+++.++..+.+||+++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 12 3999999999999999999999999999999999999986
Q ss_pred hccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-Cc
Q 017000 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 265 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~ 265 (379)
+..++++|++|+|+|+ |++|++++|+|+.+|+ +|+++.+++++.+.++++|++.+++... .++.+.+.+.+++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5788999999999966 9999999999999999 8999989999999999999999988766 6777788888877 89
Q ss_pred cEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC------CccccHHHHHHHHH
Q 017000 266 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYM 339 (379)
Q Consensus 266 d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 339 (379)
|+++|++++ ......++++++. |+++.+|.........+....+..+..+....+... .....+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 6688999999996 999999865322222222222222222222211110 01124667888888
Q ss_pred cCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 340 KKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 340 ~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
++.+++. ..+.|++++++++++.+.+++.. |+++
T Consensus 269 ~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 269 EGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8887743 56889999999999999887765 7764
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=5.8e-32 Score=250.88 Aligned_cols=301 Identities=24% Similarity=0.297 Sum_probs=239.6
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCC---CCCCCcccccceeEEEEEeCCCCCc
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 84 (379)
|||+++..++.. +.+.+.+.|.+.+++|+||+.++++|+.|+..+.|... ...+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 688898887764 56778888888999999999999999999988877542 2345889999999999999999999
Q ss_pred cCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecC
Q 017000 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (379)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP 164 (379)
+++||+|+..+.. + .+ |+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~-------------------------~---~~------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------T---RG------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC-------------------------C---CC------------------CcceeEEEecHHHhccCC
Confidence 9999999865320 0 12 389999999999999999
Q ss_pred CCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE
Q 017000 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (379)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v 243 (379)
+++++..++.+++.+.++|+++.+...+.+|++|||+|+ |.+|++++++++..|+ +|+++..++ +.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999888899999998877777999999999997 9999999999999999 788887777 8888899998888
Q ss_pred eCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeec
Q 017000 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAF 322 (379)
Q Consensus 244 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~ 322 (379)
++... .++.. .+.+ ++|+++|++|+. ....++++++++ |+++.+|....... ..+..+.++....+
T Consensus 193 ~~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~ 259 (309)
T cd05289 193 IDYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV 259 (309)
T ss_pred EeCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence 87655 33333 3334 899999999985 689999999996 99999987543111 11122344443332
Q ss_pred CCCCccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 323 GGFKSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
... ...+.++++++.++.+.+ ++.+.|+++++++|++.+.+++.. |+|+
T Consensus 260 ~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 260 EPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred ccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 211 457888999999988763 367889999999999998887765 7763
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=5.1e-31 Score=245.95 Aligned_cols=309 Identities=30% Similarity=0.448 Sum_probs=247.9
Q ss_pred ceeeeeecCCCC--eEEEEeeCCCCC-CCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCcc
Q 017000 10 CKAAVAWEPNKP--LVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (379)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 85 (379)
|+|+++..++.+ +.+.+.+ |.+. +++++|++.++++|+.|+..+.|.... ...|.++|||++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688888765543 7777777 7665 599999999999999999887776532 2446689999999999999999999
Q ss_pred CCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCC
Q 017000 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (379)
Q Consensus 86 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~ 165 (379)
++||+|+..+ .. |++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------~~------------------~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------GQ------------------GGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------CC------------------ceeEEEEEcCHHHceeCCC
Confidence 9999998542 01 3899999999999999999
Q ss_pred CCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe
Q 017000 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~ 244 (379)
++++.+++.+...+.+||+++.+...+.++++|+|+|+ |++|++++++|+..|+ +|++++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99998888888899999998777788999999999998 9999999999999999 799998999999999999998888
Q ss_pred CCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCc-ceeeeccEEEeeec
Q 017000 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRP-FQLVTGRVWKGTAF 322 (379)
Q Consensus 245 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~ 322 (379)
+... .++.+.+.+.+++ ++|.++|++|+ ..+..++++++++ |+++.+|....... .+.+ ..+.++.++.+...
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 7765 5677888888777 89999999998 6688899999996 99999987432111 1112 11233666666654
Q ss_pred CCCCc------cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEe
Q 017000 323 GGFKS------RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLK 376 (379)
Q Consensus 323 ~~~~~------~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~ 376 (379)
..... ...+.++++++.++.+.+ .....|+++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 43211 134667888898888764 367889999999999998877765 88763
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-30 Score=245.85 Aligned_cols=310 Identities=23% Similarity=0.320 Sum_probs=242.1
Q ss_pred eeeeeecCCCC--eEEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC-CCCCcccccceeEEEEEeCCCCCccCC
Q 017000 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (379)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 87 (379)
|++.+...+.+ +.+.+.+.|++.+++|+||+.++++|+.|+..+.|..+. ...|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 45666655542 778788888889999999999999999999888776532 245778999999999999999999999
Q ss_pred CCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCC
Q 017000 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (379)
Q Consensus 88 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~ 167 (379)
||+|+.... + |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~~-------------------------------~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR-------------------------------F------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC-------------------------------C------------------CeeeeEEEecHHHeEECCCCC
Confidence 999985421 1 389999999999999999999
Q ss_pred CccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEe-CChhhHHHHHhcCCceEeC
Q 017000 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVN 245 (379)
Q Consensus 168 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~~~lg~~~v~~ 245 (379)
++.+++.+++.+.++|+++.+..++++|++|+|+|+ |++|++++++|+.+ . .+.+++ ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEee
Confidence 999999998899999999888888999999999998 99999999999999 2 233332 3456788888999988888
Q ss_pred CCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCc--ccc-------------cCcce
Q 017000 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQ--EIS-------------TRPFQ 310 (379)
Q Consensus 246 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~--~~~-------------~~~~~ 310 (379)
... .++.+.+++.+.+++|+++|+.|+ .....++++++++ |+++.+|...... ... +.+..
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 765 677777877775589999999998 4588899999996 9999998653211 111 11111
Q ss_pred -eeeccEEEeeecCCCCc-----cccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 311 -LVTGRVWKGTAFGGFKS-----RSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 311 -~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
+..+.++.++.+..... ...+.++++++.++.+.+. ..+.|++++++++++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 23366666665432111 1235678888888887743 56889999999999999988766 998864
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.1e-31 Score=246.62 Aligned_cols=295 Identities=25% Similarity=0.315 Sum_probs=227.1
Q ss_pred EEEEeeCCCCCCCeEEEEEeeeeccccccccccCCCCC---CCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCC
Q 017000 23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99 (379)
Q Consensus 23 ~~~~~~~p~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 99 (379)
.+.+.+.|++.+++|+|++.++++|+.|+..+.|..+. ...|..+|||++|+|+++|++++.+++||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 77888999999999999999999999999888775421 23467899999999999999999999999998653210
Q ss_pred CCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccc
Q 017000 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179 (379)
Q Consensus 100 ~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~ 179 (379)
.+ |+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 12 389999999999999999999999999999999
Q ss_pred hhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHH
Q 017000 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (379)
Q Consensus 180 ~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~ 258 (379)
.+||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +|+++..+ ++.+.++++|++++++... .++. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999998877777999999999998 9999999999999999 88888765 8888889999988887655 3333 3
Q ss_pred HhcCC-CccEEEEcCCCH-HHHHHHHHHhccCCceEEEEccCCCCccccc---CcceeeeccEEEeeecCCCCccccHHH
Q 017000 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKGWGTSVIVGVAASGQEIST---RPFQLVTGRVWKGTAFGGFKSRSQVPW 333 (379)
Q Consensus 259 ~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~ 333 (379)
..+.+ ++|+++||+|+. ......+..++++ |+++.+|.......... ..........+...... .....+.+
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK--PNAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec--CCHHHHHH
Confidence 34445 899999999852 2233444448995 99999987543222111 01111112222222211 12467888
Q ss_pred HHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 334 LVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 334 ~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
+++++.++.+.+ .+.+.|+++++++|++.+.+++.. |+++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 999999988764 467899999999999999887765 7763
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=1.5e-30 Score=238.96 Aligned_cols=282 Identities=22% Similarity=0.275 Sum_probs=227.1
Q ss_pred CeEEEEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCC
Q 017000 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (379)
Q Consensus 35 ~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 114 (379)
++|+||+.++++|++|+....|..+ .+|.++|||++|+|+++|++++.+++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 5899999999999999998877642 3577899999999999999999999999997531
Q ss_pred CccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCC
Q 017000 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (379)
Q Consensus 115 ~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~ 194 (379)
+ |+|++|+.++.+.++++|+++++.+++.++++..++|.++.+...+++
T Consensus 60 -------------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------P------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------c------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1 389999999999999999999999999998899999998878788999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcC--CceEeCCCCCCchHHHHHHHhcCC-CccEEEE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg--~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid 270 (379)
|++|+|+|+ |++|++++|+|+.+|+ +++++..++++.+.++++| ++.+++..+ .++.+.+++.+.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999976 9999999999999999 8999988889999999888 677787665 5788888888776 8999999
Q ss_pred cCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC------CccccHHHHHHHHHcCCCC
Q 017000 271 CIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF------KSRSQVPWLVDKYMKKEIK 344 (379)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~i~ 344 (379)
+.|+. .+..++++++++ |+++.+|..............+..+.++....+... .....+.++++++.++++.
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99985 799999999996 999999875432111222222222344433322211 0123467788888889876
Q ss_pred CCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 345 VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 345 ~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
+ .....++++++++|++.+.+++.. |+|+
T Consensus 264 ~--~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 P--LPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred c--CCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 3 456789999999999999988765 7763
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=7.2e-30 Score=234.14 Aligned_cols=277 Identities=22% Similarity=0.361 Sum_probs=222.4
Q ss_pred EEEeeeeccccccccccCCCCCCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccC
Q 017000 39 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118 (379)
Q Consensus 39 V~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~ 118 (379)
||+.++++|++|+....|..+ .|.++|||++|+|+++|+.++.+++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877643 357899999999999999999999999997531
Q ss_pred CCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCCCCEE
Q 017000 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198 (379)
Q Consensus 119 ~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~V 198 (379)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.++|.++.+...+.+|++|
T Consensus 56 ---------~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------P------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------C------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 1 3899999999999999999999999999999999999987788889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC--ceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCC
Q 017000 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 274 (379)
Q Consensus 199 lI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 274 (379)
+|+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|+ +.++++.+ .++.+.+.+...+ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999889999999999998 67777765 5677778877776 89999999986
Q ss_pred HHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC-----CccccHHHHHHHHHcCCCCCCCce
Q 017000 275 VSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF-----KSRSQVPWLVDKYMKKEIKVDEYV 349 (379)
Q Consensus 275 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~i 349 (379)
..+..++++++++ |+++.+|...........+..+..+.++.+..+... .....+.++++++.++.+.+. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 6688999999996 999999875321112222222223444444332211 011246678888888887753 4
Q ss_pred eeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 350 THNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 350 ~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
.+.|++++++++++.+.+++.. |+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 5789999999999999988754 7763
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.6e-27 Score=218.45 Aligned_cols=250 Identities=28% Similarity=0.386 Sum_probs=195.4
Q ss_pred CCCCCCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCcccccc
Q 017000 56 GKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 135 (379)
Q Consensus 56 g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~ 135 (379)
|.++. ++|.++|||++|+|+++|++++++++||+|+..
T Consensus 14 ~~~~~-~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEKL-PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCccC-cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 43333 488999999999999999999999999999742
Q ss_pred CCCcccccCCccceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHH
Q 017000 136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAK 215 (379)
Q Consensus 136 ~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~ 215 (379)
+.|++|+.++.+.++++|+++++.+++.+ +.+.+||+++ ..+++++|++|||+|+|++|++++++|+
T Consensus 52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 16899999999999999999999998888 7899999986 5788999999999988999999999999
Q ss_pred HcCCCeEEEEeCChhhHHHHHhcC-CceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEE
Q 017000 216 AAGASRVIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSV 293 (379)
Q Consensus 216 ~~g~~~vi~v~~~~~~~~~~~~lg-~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv 293 (379)
.+|+++|+++++++++.++++++| ++.++...+ ..+.+ ++|++||+++....+...+++++++ |+++
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~ 187 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV 187 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence 999944999999999999999999 555544322 11234 8999999988877889999999996 9999
Q ss_pred EEccCCCCcccccCcceee-eccEEEeeecCCC---------CccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHH
Q 017000 294 IVGVAASGQEISTRPFQLV-TGRVWKGTAFGGF---------KSRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFR 363 (379)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~ 363 (379)
.+|..... ..... ..+. +..++.+...... ...+.+.++++++.++.+... +.+.|+++++++|++
T Consensus 188 ~~g~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~ 263 (277)
T cd08255 188 LVGWYGLK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYR 263 (277)
T ss_pred EEeccCCC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHH
Confidence 99875432 11111 1111 1334444433221 112468889999999987643 578899999999999
Q ss_pred HHhcCC--eeEEEE
Q 017000 364 YMHGGD--CLRCVL 375 (379)
Q Consensus 364 ~~~~~~--~~Kvvl 375 (379)
.+.+++ ..|+++
T Consensus 264 ~~~~~~~~~~k~~~ 277 (277)
T cd08255 264 LLFEDPPECLKVVL 277 (277)
T ss_pred HHHcCCccceeeeC
Confidence 998883 348874
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=2.2e-27 Score=235.21 Aligned_cols=292 Identities=19% Similarity=0.237 Sum_probs=241.3
Q ss_pred eEEEEeeCC---CCCCCeEEEEEeeeeccccccccccCCCCCCCCC-------cccccceeEEEEEeCCCCCccCCCCEE
Q 017000 22 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-------CILGHEAAGIVESVGEGVTEVQPGDHV 91 (379)
Q Consensus 22 ~~~~~~~~p---~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~~Gd~V 91 (379)
+.+.|-|.. +..++.=+.-|-|+.||..|+++..|+.+...+| .++|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 455555543 2356677899999999999999999988766555 4789999997 5669999
Q ss_pred eecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEecCCCCCccc
Q 017000 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (379)
Q Consensus 92 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~ 171 (379)
+..... -+++..+.++.+++|.+|.+.++++
T Consensus 1499 M~mvpA-------------------------------------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVPA-------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeeeh-------------------------------------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 754320 1688888899999999999999999
Q ss_pred cccccccchhhcchhhhccCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcC----CceEeCC
Q 017000 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNP 246 (379)
Q Consensus 172 aa~l~~~~~ta~~al~~~~~~~~g~~VlI~-Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg----~~~v~~~ 246 (379)
|+..|+.+.|+|+||..++..++|+++||+ |+|++|++||.+|.+.|+ +|+.+..+.||++++.++. .+.+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 669999999999999999 8999999999999998644 3445555
Q ss_pred CCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCC
Q 017000 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 325 (379)
Q Consensus 247 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 325 (379)
++ .+|...+++.|+| |+|+|+++... +.++.+++||+.. |||..+|...-..+.+..+.-|++|.++.|..+-+.
T Consensus 1609 Rd--tsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RD--TSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cc--ccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 55 8999999999999 99999999888 5699999999995 999999987655566666777788999888776554
Q ss_pred C--ccccHHHHHHHHHcCCCC--CCCceeeeeecchHHHHHHHHhcCCee-EEEEec
Q 017000 326 K--SRSQVPWLVDKYMKKEIK--VDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKM 377 (379)
Q Consensus 326 ~--~~~~~~~~~~~~~~~~i~--~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~ 377 (379)
. ..+++.++..++++|.-. +.|+.+++|+-.++++||+++.++++. |||+++
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 3 223566677777665433 456778999999999999999999997 999986
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=4.3e-25 Score=192.52 Aligned_cols=297 Identities=22% Similarity=0.273 Sum_probs=221.4
Q ss_pred eEEEEeeCC-CCCCCeEEEEEeeeeccccccccccCCCCCC-CCCcccc----cceeEEEEEeCCCCCccCCCCEEeecC
Q 017000 22 LVIEDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILG----HEAAGIVESVGEGVTEVQPGDHVIPCY 95 (379)
Q Consensus 22 ~~~~~~~~p-~~~~~~VlV~v~~~~i~~~D~~~~~g~~~~~-~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (379)
+...+++++ ++++++|+||..|-+..|.-..-++-..+.. --|+.|| ..++|+|++. +.+++++||.|.
T Consensus 24 ~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~--- 98 (343)
T KOG1196|consen 24 FTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVW--- 98 (343)
T ss_pred eeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEE---
Confidence 333445544 4588999999999998876543332222211 1123333 2789999994 668999999995
Q ss_pred CcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCc--ceEecCC--CCCccc
Q 017000 96 QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDP--QAPLDK 171 (379)
Q Consensus 96 ~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~iP~--~~~~~~ 171 (379)
|.. +|.||..+++. ..++||. ++++..
T Consensus 99 ---------------------------g~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ 129 (343)
T KOG1196|consen 99 ---------------------------GIV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSY 129 (343)
T ss_pred ---------------------------Eec----------------------cceEEEEecCcchhcccCCCCCccCHhh
Confidence 333 89999999774 4445443 344333
Q ss_pred cc-cccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEeCCCC
Q 017000 172 VC-LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKD 248 (379)
Q Consensus 172 aa-~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~ 248 (379)
.. ++..+.+|||..+.+....++|++|+|.|| |++|+++.|+|+.+|+ +|+++..+++|.+++++ +|.+..+||.+
T Consensus 130 ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~ 208 (343)
T KOG1196|consen 130 YLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE 208 (343)
T ss_pred hhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC
Confidence 32 366788999999999999999999999988 9999999999999999 99999999999998875 79999999998
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC---Ccc--cccCcceeeeccEEEeeecC
Q 017000 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS---GQE--ISTRPFQLVTGRVWKGTAFG 323 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~---~~~--~~~~~~~~~~~~~i~~~~~~ 323 (379)
+.+..+++++..+.|+|+-||.+|+ ..+...+..|+.. |+++.+|+.+. +.+ +.-...-+.+.+.+.|+...
T Consensus 209 -e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~ 285 (343)
T KOG1196|consen 209 -ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVS 285 (343)
T ss_pred -ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEee
Confidence 2488899999888899999999999 6689999999995 99999997642 111 11112223447777776554
Q ss_pred CCC--ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEecC
Q 017000 324 GFK--SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVLKMQ 378 (379)
Q Consensus 324 ~~~--~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl~~~ 378 (379)
.+. ....++.+..++++|+|+..+-+.. .|+..+.||..|-+++.. |.++++.
T Consensus 286 d~~d~~~k~ld~l~~~ikegKI~y~edi~~--Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 286 DYLDKYPKFLDFLLPYIKEGKITYVEDIAD--GLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred chhhhhHHHHHHHHHHHhcCceEEehhHHH--HHhccHHHHHHHhccCcccceEEEee
Confidence 432 2334677888899999996544333 599999999999998876 9988875
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=3.6e-23 Score=162.05 Aligned_cols=108 Identities=37% Similarity=0.689 Sum_probs=94.0
Q ss_pred CCeEEEEEeeeeccccccccccCC-CCCCCCCcccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCC
Q 017000 34 AGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112 (379)
Q Consensus 34 ~~~VlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~ 112 (379)
|+||||||.+++||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999994 4555889999999999999999999999999999999998999999999999999
Q ss_pred CCCccCCCccceecCCCccccccCCCcccccCCccceeeeEEecCcceEec
Q 017000 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (379)
Q Consensus 113 c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~i 163 (379)
|.+... +|.. .+| +|+||+.+|+++++|+
T Consensus 81 c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLG-LDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTS-STC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcC-CCC------------------cccCeEEEehHHEEEC
Confidence 987664 3433 445 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.73 E-value=3.5e-17 Score=132.32 Aligned_cols=127 Identities=29% Similarity=0.445 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEEEEcCCCHHHHHHHHH
Q 017000 205 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283 (379)
Q Consensus 205 ~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 283 (379)
++|++++|+|+++|+ +|++++++++|+++++++|+++++++++ .++.+.+++.+++ ++|+||||+|++..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 7799999999998 99999999998899999999
Q ss_pred HhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCCccccHHHHHHHHH
Q 017000 284 CCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVPWLVDKYM 339 (379)
Q Consensus 284 ~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 339 (379)
+++++ |+++.+|... ....+++...++. ++++.+++.+. .+++++++++++
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99996 9999999976 4556666666555 99999998764 468888888775
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.46 E-value=1.2e-12 Score=124.14 Aligned_cols=175 Identities=15% Similarity=0.176 Sum_probs=133.5
Q ss_pred cchhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhc
Q 017000 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 183 ~~al~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
+.++.+..+ ..+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|++.++.+|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344445444 4689999999999999999999999999 89999999999999999998432 1 11122
Q ss_pred CCCccEEEEcCCCHHHHHHH-HHHhccCCceEEEEccCCCCcccccCcceeee-ccEEEeeecCCCCccccHH--HHHHH
Q 017000 262 DGGVDYSFECIGNVSVMRAA-LECCHKGWGTSVIVGVAASGQEISTRPFQLVT-GRVWKGTAFGGFKSRSQVP--WLVDK 337 (379)
Q Consensus 262 ~~~~d~vid~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~--~~~~~ 337 (379)
.++|+||+|+|+...+... +..++++ |+++.+|.. ...++...+.. ++++.++..... ..+++ +.+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888876 9999996 999999864 23444444443 667776643321 12455 78999
Q ss_pred HHcCCC-CCCCceeee-----eecc-hHHHHHHHHhcCCee--EEEEecC
Q 017000 338 YMKKEI-KVDEYVTHN-----MTLG-EINEAFRYMHGGDCL--RCVLKMQ 378 (379)
Q Consensus 338 ~~~~~i-~~~~~i~~~-----~~~~-~i~~a~~~~~~~~~~--Kvvl~~~ 378 (379)
+.+|++ .+...+.+. |+|+ |+.+++..+.+++.. |+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999999 788788888 8999 999999999887653 8887653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.37 E-value=1.3e-11 Score=119.96 Aligned_cols=154 Identities=18% Similarity=0.231 Sum_probs=113.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE-eCCCCC-----------CchHHHHHH
Q 017000 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLV 258 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~-----------~~~~~~~i~ 258 (379)
+..++++|+|+|+|.+|+++++.|+.+|+ +|++++.+++|++.++++|++.+ ++..+. +.++.+..+
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 35689999999999999999999999999 89999999999999999999854 554321 123333333
Q ss_pred Hh-cC--CCccEEEEcCCC-----HHHH-HHHHHHhccCCceEEEEccCCCC-cccccCcceee--eccEEEeeecCCCC
Q 017000 259 DL-TD--GGVDYSFECIGN-----VSVM-RAALECCHKGWGTSVIVGVAASG-QEISTRPFQLV--TGRVWKGTAFGGFK 326 (379)
Q Consensus 259 ~~-~~--~~~d~vid~~g~-----~~~~-~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~--~~~~i~~~~~~~~~ 326 (379)
+. .+ +++|+||+|++. +.++ +++++.++++ |+++++|....+ ...+.+...+. +++++.|.+. .+
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc
Confidence 32 33 379999999996 3364 9999999997 999999985322 13344333443 4888888753 22
Q ss_pred ccccHH-HHHHHHHcCCCCCCCcee
Q 017000 327 SRSQVP-WLVDKYMKKEIKVDEYVT 350 (379)
Q Consensus 327 ~~~~~~-~~~~~~~~~~i~~~~~i~ 350 (379)
..++ +..+++.++.+.+.++++
T Consensus 317 --~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 --SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred --hhHHHHHHHHHHhCCccHHHHhc
Confidence 3455 589999999888766654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.27 E-value=1.6e-12 Score=104.53 Aligned_cols=120 Identities=22% Similarity=0.286 Sum_probs=77.0
Q ss_pred cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC--CHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeecc
Q 017000 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGR 315 (379)
Q Consensus 238 lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~ 315 (379)
||+++++||++ .++ ...+++|+|||++| ....+..+++++ ++ |+++.++. ....+... ....
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~--~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARR--LKGR 64 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHH--HHCH
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhh--hccc
Confidence 69999999986 565 22348999999999 655557778888 96 99999974 00011010 0111
Q ss_pred EEEeeecCC-CC---ccccHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 017000 316 VWKGTAFGG-FK---SRSQVPWLVDKYMKKEIKVDEYVTHNMTLGEINEAFRYMHGGDCL-RCVL 375 (379)
Q Consensus 316 ~i~~~~~~~-~~---~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~i~~a~~~~~~~~~~-Kvvl 375 (379)
.+....+.. .+ ..+.++++++++++|++++. +.++||++++.+|++.+++++.. |+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 122222221 11 23459999999999999964 88999999999999999999987 9997
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.59 E-value=2.5e-07 Score=84.48 Aligned_cols=167 Identities=21% Similarity=0.306 Sum_probs=101.5
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEeCChhhHHHHHhc----CCceEeCCCCCCchHHHHHHHhcCC
Q 017000 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
.+.+++|++||.+|+|+ |..+.++++..|.. +|++++.+++.++.+++. +.+.+- ... .++.+ + .+.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~--~d~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL--GEIEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE--cchhh-C-CCCCC
Confidence 35688999999999987 98888889888763 799999999998888763 332211 000 11111 0 12234
Q ss_pred CccEEEEcC------CCHHHHHHHHHHhccCCceEEEEccCCCCcccccCcceeeeccEEEeeecCCCCccccHHHHHHH
Q 017000 264 GVDYSFECI------GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDK 337 (379)
Q Consensus 264 ~~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 337 (379)
.||+|+... .....+.++.+.|+++ |+++..+..... .+ +..+.....+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~---~~~~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL---PEEIRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC---CHHHHHhHHHHhccccC---CCCHHHHHHH
Confidence 799998543 2346799999999997 999987654321 11 11111111111111111 1245566666
Q ss_pred HHcCCCC-CCCceeeeeecchHHHHHHHH--hcCC
Q 017000 338 YMKKEIK-VDEYVTHNMTLGEINEAFRYM--HGGD 369 (379)
Q Consensus 338 ~~~~~i~-~~~~i~~~~~~~~i~~a~~~~--~~~~ 369 (379)
+.+.-+. ......+.++++++.++++.+ .+++
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 7663333 222244668899999999988 4443
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.56 E-value=1.1e-06 Score=85.68 Aligned_cols=106 Identities=21% Similarity=0.315 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE-eCCCCC-----------CchHHHHHHHh
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-----------DKPIQQVLVDL 260 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~-----------~~~~~~~i~~~ 260 (379)
.++++|+|+|+|.+|++++++|+.+|+ +|++++.++++++.++++|++.+ ++..+. ..++.+..++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999998763 222110 12444433443
Q ss_pred cC---CCccEEEEcC---CCHH---HHHHHHHHhccCCceEEEEccCCC
Q 017000 261 TD---GGVDYSFECI---GNVS---VMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 261 ~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
.. .++|++|+|+ |.+. ..++.++.++++ +.+|+++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 33 2799999999 5433 567889999997 99999987543
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.41 E-value=4.5e-06 Score=79.88 Aligned_cols=103 Identities=25% Similarity=0.318 Sum_probs=78.5
Q ss_pred hcchhhhccCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHh
Q 017000 182 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 182 a~~al~~~~~~~-~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~ 260 (379)
+|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 345444443444 89999999999999999999999999 899999988887766666754 221 21121
Q ss_pred cCCCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017000 261 TDGGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 261 ~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 299 (379)
.++|+||+++|+...+. ..+..++++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26899999999988776 678888996 8888888754
No 135
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.27 E-value=4.3e-08 Score=94.66 Aligned_cols=159 Identities=18% Similarity=0.200 Sum_probs=104.7
Q ss_pred ccccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCC
Q 017000 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMG 145 (379)
Q Consensus 66 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~ 145 (379)
.-|.|+++.+.+|++++.+ +|++.+.+ ||.|.+| ++.|..... .|.. .++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~-l~~---------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKV-LER---------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHH-HHH----------------
Confidence 3588999999999998776 66667776 9999988 455554332 2222 333
Q ss_pred ccceeeeEEecCcceEe---c-CCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 017000 146 TSTFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR 221 (379)
Q Consensus 146 ~g~~a~~~~v~~~~~~~---i-P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~ 221 (379)
.|++++.++. .+.. | +..++...+| .....+..+..++++|+|+|+|.+|..+++.++..|+.+
T Consensus 139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 8988888765 3332 2 2222222221 110122333467899999999999999999999999668
Q ss_pred EEEEeCChhhH-HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 017000 222 VIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 222 vi~v~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 276 (379)
|++++++.++. ++++++|.. .+.. .++.+.+ .++|+||.|++.+.
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCC
Confidence 99999998875 466777763 2222 1222222 25999999988754
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.21 E-value=1.5e-05 Score=75.82 Aligned_cols=102 Identities=25% Similarity=0.340 Sum_probs=78.0
Q ss_pred cchhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhc
Q 017000 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 183 ~~al~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
+.++.+..+ ..+|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...++..|+. +++ ..+.+
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal---- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA---- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence 344444433 3689999999999999999999999999 899999888887777777763 221 11122
Q ss_pred CCCccEEEEcCCCHHHHHH-HHHHhccCCceEEEEccCC
Q 017000 262 DGGVDYSFECIGNVSVMRA-ALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 262 ~~~~d~vid~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~ 299 (379)
.+.|++|+++|+...++. .+..++++ +.++.+|-..
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 257999999999887865 88888996 9999888653
No 137
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.14 E-value=7.7e-05 Score=68.10 Aligned_cols=140 Identities=16% Similarity=0.123 Sum_probs=92.1
Q ss_pred ceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhcc---CCCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 017000 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 222 (379)
Q Consensus 148 ~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~---~~~~g~~VlI~Ga-g~vG~~a~~la~-~~g~~~v 222 (379)
.|-+|.++..+..+.- +....++.+-| .+.|+|. |.+.. ..-..+.|+|.+| +-.++.++.+++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 5666766665554411 11112222223 4566664 22221 1234467777877 889998888888 5555599
Q ss_pred EEEeCChhhHHHHHhcCC-ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCCC
Q 017000 223 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 223 i~v~~~~~~~~~~~~lg~-~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
|++ +|+...+..+++|. ++|+.|++ +..+.....-+++|.+|+..+...+...+.+..-..+.+|..+.
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 999 66777789999987 55777765 44444446678999999999889999988886455778887653
No 138
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.11 E-value=2e-05 Score=70.97 Aligned_cols=133 Identities=23% Similarity=0.276 Sum_probs=83.4
Q ss_pred ceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeC
Q 017000 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 148 ~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
+|.+|.. +...++.+++.+++..+..-... . .+..+.. ...++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~-~-~l~~l~~--~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPTTR-L-CLEALEK--LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHHHH-H-HHHHHHh--hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555544 67788999998887765422111 1 1111211 256899999999986 887776554 67767999999
Q ss_pred ChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC--CccEEEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 017000 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 228 ~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~--~~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++...+.+++.....-+. .. . ....+ .||+|+...... .+++.+.+.|+++ |+++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~-~~--~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVE-LN--V-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCC-ce--E-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 998887776531110000 00 0 01111 589998655432 4567888889997 999987653
No 139
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.10 E-value=5e-05 Score=69.95 Aligned_cols=95 Identities=22% Similarity=0.332 Sum_probs=74.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
.+++|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++.+ .. .++ .+.. ..+|+||+|++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l----~~~l-~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SEL----AEEV-GKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHH----HHHh-CCCCEEEECCC
Confidence 68999999999999999999999999 99999999988888888887532 11 122 2221 25999999987
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCCC
Q 017000 274 NVSVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
........+..++++ +.++.++....
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCC
Confidence 754456777889996 99999987543
No 140
>PLN02494 adenosylhomocysteinase
Probab=98.09 E-value=2.9e-05 Score=74.71 Aligned_cols=101 Identities=25% Similarity=0.323 Sum_probs=78.5
Q ss_pred cchhhhccCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhc
Q 017000 183 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 183 ~~al~~~~~~-~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
+.++++..++ -.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|... + +..+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal---- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVV---- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHH----
Confidence 3344454443 679999999999999999999999999 8999999888776777777642 1 122222
Q ss_pred CCCccEEEEcCCCHHHH-HHHHHHhccCCceEEEEccC
Q 017000 262 DGGVDYSFECIGNVSVM-RAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~~~d~vid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 298 (379)
..+|+++++.|+...+ ...+..++++ +.++.+|-.
T Consensus 308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 1489999999987754 8899999996 999999875
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.08 E-value=1.2e-05 Score=74.77 Aligned_cols=108 Identities=20% Similarity=0.218 Sum_probs=79.6
Q ss_pred cceEecCCCCCccccccccccchhhcchhhhccCC----CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhH-
Q 017000 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV----EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF- 232 (379)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~----~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~- 232 (379)
...+++|+.+..+.++... +.+.+++++ +.+.. .++++|+|+|+|.+|..+++.++..|+.+|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 5778889999888887765 566666664 33332 4799999999999999999999998877899999998764
Q ss_pred HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHHH
Q 017000 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (379)
Q Consensus 233 ~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 277 (379)
++++++|.. +++. .++.+.+ ..+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPL----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeH----HHHHHHH-----hcCCEEEECCCCCch
Confidence 777888873 3322 1222222 248999999998654
No 142
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.01 E-value=2.2e-07 Score=89.97 Aligned_cols=158 Identities=20% Similarity=0.226 Sum_probs=95.1
Q ss_pred cccceeEEEEEeCCCCCccCCCCEEeecCCcCCCCCccccCCCCCCCCCccCCCccceecCCCccccccCCCcccccCCc
Q 017000 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (379)
Q Consensus 67 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~ 146 (379)
-|+|+++.+.+|++++.+.-+|+ +.. ||.|.. .+..|..... .|.. .++
T Consensus 92 ~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk~----a~~~a~~~g~---~g~~-l~~----------------- 140 (423)
T PRK00045 92 EGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVKD----AYALAQEAGT---VGTI-LNR----------------- 140 (423)
T ss_pred CCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHHH----HHHHHHHcCC---chHH-HHH-----------------
Confidence 59999999999999887744444 333 444442 1222222111 1111 122
Q ss_pred cceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccC----CCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 017000 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK----VEPGSIVAVFGLGTVGLAVAEGAKAAGASRV 222 (379)
Q Consensus 147 g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~----~~~g~~VlI~Gag~vG~~a~~la~~~g~~~v 222 (379)
.|++.+. +|..+..+.+.. ..+.+.+++++ +.+. -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 141 -lf~~a~~--------~~k~v~~~t~i~-~~~~Sv~~~Av-~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 141 -LFQKAFS--------VAKRVRTETGIG-AGAVSVASAAV-ELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred -HHHHHHH--------HHhhHhhhcCCC-CCCcCHHHHHH-HHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 5544433 344333322222 22445555554 2222 2578999999999999999999999998789
Q ss_pred EEEeCChhhHH-HHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 017000 223 IGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 223 i~v~~~~~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 276 (379)
++++++.++.+ +++++|.+ ++.. .++.+.+ .++|+||+|+|.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~----~~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPL----DELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeH----HHHHHHh-----ccCCEEEECCCCCC
Confidence 99999988754 77777753 3322 1221111 26899999998754
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.85 E-value=0.00012 Score=69.62 Aligned_cols=98 Identities=20% Similarity=0.235 Sum_probs=69.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.+ ++........+ ...+.+.+ ..+|+||+|+
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence 34569999999999999999999999 89999999888777654 45432222221 12222222 2589999997
Q ss_pred C---C--HH-HHHHHHHHhccCCceEEEEccCC
Q 017000 273 G---N--VS-VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 273 g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+ . +. .....++.++++ +.++.++...
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 3 2 22 236777889996 9999998653
No 144
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.80 E-value=0.00012 Score=70.60 Aligned_cols=101 Identities=23% Similarity=0.327 Sum_probs=76.1
Q ss_pred chhhhccC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcC
Q 017000 184 GAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 184 ~al~~~~~-~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~ 262 (379)
.++++..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+.. . ++.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----
Confidence 34444333 4579999999999999999999999999 8999988877765555566532 1 122222
Q ss_pred CCccEEEEcCCCHHHHH-HHHHHhccCCceEEEEccCC
Q 017000 263 GGVDYSFECIGNVSVMR-AALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 263 ~~~d~vid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~ 299 (379)
..+|+|+.++|+...+. ..+..|+++ +.++.+|-..
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 25899999999877774 889999997 9999998653
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.75 E-value=0.0002 Score=73.94 Aligned_cols=138 Identities=24% Similarity=0.314 Sum_probs=87.8
Q ss_pred cceeeeEEecCcceEecCCCCCccccccccccchhhcchhhhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 017000 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (379)
Q Consensus 147 g~~a~~~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v 225 (379)
-.+++|..+++..++.+ +..+.+++..-.. ......+|++|||+|+ |++|..+++.+...|+ +|+++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~ 452 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA 452 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence 46677887887777777 5555565542110 0122346899999987 9999999999999999 89999
Q ss_pred eCChhhHHHHHh-cCC--c-e--EeCCCCCCchHHHHHHHhc--CCCccEEEEcCCC-----------------------
Q 017000 226 DIDPKKFDRAKN-FGV--T-E--FVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGN----------------------- 274 (379)
Q Consensus 226 ~~~~~~~~~~~~-lg~--~-~--v~~~~~~~~~~~~~i~~~~--~~~~d~vid~~g~----------------------- 274 (379)
+++.++.+.+.+ ++. . . ..|..+ ...+.+.+.+.. .+++|++|+++|.
T Consensus 453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 453 DLDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred eCCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 998877655433 432 1 1 123333 122333333321 2479999999982
Q ss_pred --HHHHHHHHHHhcc---CCceEEEEccC
Q 017000 275 --VSVMRAALECCHK---GWGTSVIVGVA 298 (379)
Q Consensus 275 --~~~~~~~~~~l~~---~~G~iv~~g~~ 298 (379)
..+++.++..+++ + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1234555666655 4 789988764
No 146
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.68 E-value=0.00023 Score=65.44 Aligned_cols=98 Identities=24% Similarity=0.293 Sum_probs=64.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc----CCceEeCCCCCCchHHHHHHHhcCCCccE
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l----g~~~v~~~~~~~~~~~~~i~~~~~~~~d~ 267 (379)
..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +....+.... .+ ......++||+
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~--~~----~~~~~~~~fDl 228 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL--IY----LEQPIEGKADV 228 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe--cc----cccccCCCceE
Confidence 45789999999987 887777665 5777999999999877776642 2211110000 01 11122347999
Q ss_pred EEEcCCCH---HHHHHHHHHhccCCceEEEEccC
Q 017000 268 SFECIGNV---SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 268 vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
|+...... .++..+.+.|+++ |.++..|..
T Consensus 229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 98644332 4567788999997 999877653
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.68 E-value=0.00023 Score=61.01 Aligned_cols=99 Identities=22% Similarity=0.248 Sum_probs=73.8
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhh----HHHHHhcCCceEe-CCCCCCchHHHHHHHh
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFGVTEFV-NPKDHDKPIQQVLVDL 260 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~----~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~ 260 (379)
+.+...+++|++||=+|+| .|+.++-+|+..| +|+.+++.++- ++.++.+|...|. ...|. ...+
T Consensus 64 m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG-------~~G~ 133 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDG-------SKGW 133 (209)
T ss_pred HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc-------ccCC
Confidence 4577789999999999996 6999999999988 89999998873 3445668885432 22221 1123
Q ss_pred cCC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 261 TDG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 261 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
... .||.++-+.+-+..-..+++.|+++ |++|.-
T Consensus 134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 333 8999998877767668889999997 998754
No 148
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.61 E-value=5.9e-05 Score=76.14 Aligned_cols=80 Identities=26% Similarity=0.361 Sum_probs=59.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC---------------------hhhHHHHHhcCCceEeCCCC-
Q 017000 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 248 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~---------------------~~~~~~~~~lg~~~v~~~~~- 248 (379)
..++|++|+|+|+|+.|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 35677888999887766432
Q ss_pred CCchHHHHHHHhcCCCccEEEEcCCCHH
Q 017000 249 HDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 249 ~~~~~~~~i~~~~~~~~d~vid~~g~~~ 276 (379)
.+... +.+ ..++|+||+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 11111 111 126999999999843
No 149
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.55 E-value=0.001 Score=60.99 Aligned_cols=94 Identities=20% Similarity=0.280 Sum_probs=69.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
.|++|+|+|.|.+|..++..++.+|+ +|+++++++++.+.+.++|... +.. .++. +.. ..+|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~----~~l~----~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL----NKLE----EKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH----HHHH----HHh-ccCCEEEECCC
Confidence 57999999999999999999999999 8999999988887777777532 111 1222 221 25899999987
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCC
Q 017000 274 NVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
..-.-...+..++++ ..++.++...
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 643235567778885 8888887643
No 150
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.51 E-value=0.00054 Score=55.42 Aligned_cols=73 Identities=25% Similarity=0.347 Sum_probs=53.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCc--eEeCCCCCCchHHHHHHHhcCCCccEEEE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~--~v~~~~~~~~~~~~~i~~~~~~~~d~vid 270 (379)
.+.+|||+|+|+.|.+++..+...|+++|+.+.++.+|.+.+. .++.. .++.+.+ +.+.+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 5899999999999999999999999988999999988866554 45322 2333332 22111 25999999
Q ss_pred cCCCH
Q 017000 271 CIGNV 275 (379)
Q Consensus 271 ~~g~~ 275 (379)
|++.+
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98875
No 151
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.49 E-value=0.00067 Score=59.30 Aligned_cols=79 Identities=18% Similarity=0.301 Sum_probs=59.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCC----ceEeCCCCCCchHHHHHHHhcCC--Cc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV----TEFVNPKDHDKPIQQVLVDLTDG--GV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~----~~v~~~~~~~~~~~~~i~~~~~~--~~ 265 (379)
+++.++|+|| +++|.+.++.+...|+ +|+.+.+..+|++.+. +++. ...+|..+ ..+....+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4588999999 9999999999999999 9999999999887654 5773 22345544 23444445544444 69
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++.+|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998885
No 152
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.45 E-value=0.00087 Score=56.82 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc---eEeCCCCC--CchHHHHHHHhcCCCccE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT---EFVNPKDH--DKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~---~v~~~~~~--~~~~~~~i~~~~~~~~d~ 267 (379)
-|.+|||+|. +++|+.+++-...+|- +||.+.+++++++.+++.... .|.|..+. ...+.+.+.+..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4789999965 9999999999999999 999999999999988864432 24454441 1224444444333 5899
Q ss_pred EEEcCCC
Q 017000 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+++++|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998875
No 153
>PRK06182 short chain dehydrogenase; Validated
Probab=97.36 E-value=0.0026 Score=57.88 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~d~vi 269 (379)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++...+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3678999998 9999999999988999 89999898887766555554332 23333 133333333322 23799999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 154
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0032 Score=57.32 Aligned_cols=77 Identities=23% Similarity=0.373 Sum_probs=54.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEEEEc
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~d~vid~ 271 (379)
+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899988 9999999999999999 89999998887776666565433 34433 133333333332 2379999999
Q ss_pred CCC
Q 017000 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
+|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 155
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.34 E-value=0.0021 Score=54.79 Aligned_cols=104 Identities=20% Similarity=0.227 Sum_probs=73.2
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCce-EeCCCC--CCchHHHHHHHhcCCCccE
Q 017000 194 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD--HDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga--g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~~~~~--~~~~~~~~i~~~~~~~~d~ 267 (379)
..+.|||+|. |++|.+++.-...-|+ .|+++.+.-+++..+. ++|..- -+|..+ +-..+...++..++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999964 9999999999999999 9999999998887766 677532 233332 1234555677777889999
Q ss_pred EEEcCCCH----------HH--------------H--HHHHHHhccCCceEEEEccCC
Q 017000 268 SFECIGNV----------SV--------------M--RAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 268 vid~~g~~----------~~--------------~--~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.++.+|.+ +. + .....+++.. |+||.+|...
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~ 141 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLA 141 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEeccee
Confidence 99977651 11 1 1223456775 9999998754
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.31 E-value=0.0026 Score=55.04 Aligned_cols=102 Identities=25% Similarity=0.418 Sum_probs=70.3
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHH----hcC-CceEeCCCCCCchHHHHHHHhc
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~----~lg-~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
.+..+.++++||-+|+|. |.+++.+++.++. .+|++++.+++..+.++ .+| .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhhc-
Confidence 456788999999999987 9999999988753 48999999998877654 355 22221111 1222222222
Q ss_pred CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 017000 262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2479999985443 45688888999997 998853
No 157
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.27 E-value=0.0041 Score=55.12 Aligned_cols=102 Identities=25% Similarity=0.326 Sum_probs=66.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-Hhc---CCceEe--CCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l---g~~~v~--~~~~~~~~~~~~i~~~~--~~~ 264 (379)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ .++ +..+.+ |..+ .....+.+.+.. .++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4689999988 9999999999999999 899999988876554 222 222222 2222 122333232221 136
Q ss_pred ccEEEEcCCCH-----------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 265 VDYSFECIGNV-----------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 265 ~d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+|.++.+.+.. ..++..+..++++ |+++.++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 89999888741 1244555666775 899988764
No 158
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.22 E-value=0.0029 Score=58.79 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=71.6
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHH----hcCCceEeCCCCCCchHHHHHHHhc
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~ 261 (379)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+....
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--
Confidence 455678899999999997 59999999998874 36999999998766554 35665432221 122111111
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.+|+|+.+.+-.......++.++++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999888766667788899997 998763
No 159
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.20 E-value=0.0016 Score=62.35 Aligned_cols=109 Identities=19% Similarity=0.251 Sum_probs=75.2
Q ss_pred cchhhcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHH
Q 017000 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257 (379)
Q Consensus 178 ~~~ta~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i 257 (379)
+-.+.+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~---- 222 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY---- 222 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----
Confidence 333445556677788999999999985 67778888988898 9999999999999888643221111110 122
Q ss_pred HHhcCCCccEEEEc-----CCC---HHHHHHHHHHhccCCceEEEEc
Q 017000 258 VDLTDGGVDYSFEC-----IGN---VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 258 ~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g 296 (379)
... .+.+|.|+.. +|. ...++.+.+.|+|+ |+++...
T Consensus 223 ~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 111 3479988743 333 35688899999997 9988754
No 160
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.17 E-value=0.0053 Score=51.63 Aligned_cols=104 Identities=27% Similarity=0.336 Sum_probs=70.6
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCceEeCCCCCCchHHHHHHHhcC
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~~ 262 (379)
+.+.++++|+.++=+|+| .|-.+++++...-..+||++++++++.++.+ ++|.+.+.... .+..+.+..+.
T Consensus 27 ls~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~- 101 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP- 101 (187)
T ss_pred HHhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC-
Confidence 355678999988778885 3666778885554559999999999877664 57876432221 12223333221
Q ss_pred CCccEEEEcCCC--HHHHHHHHHHhccCCceEEEEcc
Q 017000 263 GGVDYSFECIGN--VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 263 ~~~d~vid~~g~--~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+|.+|---|. ...++.++..|+++ |++|.-..
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 59999864333 46789999999997 99986544
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.003 Score=57.63 Aligned_cols=79 Identities=16% Similarity=0.251 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE-eCCCCCCchHHHHHH---HhcCCCccEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLV---DLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~---~~~~~~~d~v 268 (379)
.+++|||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ..++...+. +...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4678999988 9999999999888999 89999999888877776665433 34433 122323333 2233479999
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
++++|.
T Consensus 81 i~~Ag~ 86 (277)
T PRK05993 81 FNNGAY 86 (277)
T ss_pred EECCCc
Confidence 998763
No 162
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.14 E-value=0.0068 Score=51.93 Aligned_cols=101 Identities=22% Similarity=0.296 Sum_probs=62.9
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCC-CccEE
Q 017000 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYS 268 (379)
Q Consensus 190 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~-~~d~v 268 (379)
..+++|++||.+|+|+-+.......+..+..+|++++.++.+ ...++. ++..+-......+.+.+.... ++|+|
T Consensus 28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D~V 102 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVDVV 102 (188)
T ss_pred cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCccEE
Confidence 456899999999997655544444444344489999998864 112333 222111113334445554545 89999
Q ss_pred EE-cC----CC------------HHHHHHHHHHhccCCceEEEEc
Q 017000 269 FE-CI----GN------------VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 269 id-~~----g~------------~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+. .. |. ..++..+.+.|+++ |+++...
T Consensus 103 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 103 MSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 94 32 21 35678889999997 9988753
No 163
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.08 E-value=0.0063 Score=51.63 Aligned_cols=93 Identities=25% Similarity=0.311 Sum_probs=63.4
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe-CCCCCCchHHHHHHHhcCCCccEEEEcCCC-
Q 017000 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN- 274 (379)
Q Consensus 198 VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 274 (379)
|+|+|+ |.+|..+++.+...|. +|+++.+++++.+. ..+++.+. |..+ . +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~d--~---~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLFD--P---DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTTC--H---HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeehh--h---hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998776 44444332 2222 2 22333222 69999999985
Q ss_pred ---HHHHHHHHHHhccC-CceEEEEccCC
Q 017000 275 ---VSVMRAALECCHKG-WGTSVIVGVAA 299 (379)
Q Consensus 275 ---~~~~~~~~~~l~~~-~G~iv~~g~~~ 299 (379)
.+....+++.++.. -.+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 34455666665543 13777776543
No 164
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.07 E-value=0.0054 Score=55.52 Aligned_cols=105 Identities=22% Similarity=0.342 Sum_probs=68.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee----CCCCCCchHHHHHHH--hc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV----NPKDHDKPIQQVLVD--LT 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~----~~~~~~~~~~~~i~~--~~ 261 (379)
.|+.|+|+|| +++|.+.+--.-..|+ +++.+.+..++++.. ++.+..+ ++ |-.+ .++....+.+ ..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 4789999999 9999988888888899 667666777666555 4455544 32 2222 1222222222 12
Q ss_pred CCCccEEEEcCCCH-------------------------HHHHHHHHHhccCC-ceEEEEccCCC
Q 017000 262 DGGVDYSFECIGNV-------------------------SVMRAALECCHKGW-GTSVIVGVAAS 300 (379)
Q Consensus 262 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~iv~~g~~~~ 300 (379)
.|++|+.++.+|-. ...+.++..|++.+ |+||.++...+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 35899999987751 23556666677655 99999987654
No 165
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.05 E-value=0.0055 Score=54.98 Aligned_cols=80 Identities=16% Similarity=0.260 Sum_probs=56.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-c----CCce-E--eCCCCCCchHHHHHHHhcCC
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTE-F--VNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~-v--~~~~~~~~~~~~~i~~~~~~ 263 (379)
..+.++||+|| +++|...+..+...|+ +++.+.++++|++.+.+ + |... + +|..+ +.+......++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~-~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD-PEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC-hhHHHHHHHHHHhc
Confidence 46789999999 9999999999999999 99999999999876643 2 2221 2 23333 22333333333222
Q ss_pred --CccEEEEcCCC
Q 017000 264 --GVDYSFECIGN 274 (379)
Q Consensus 264 --~~d~vid~~g~ 274 (379)
.+|+.++++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 79999999986
No 166
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.05 E-value=0.0039 Score=52.98 Aligned_cols=89 Identities=31% Similarity=0.392 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
-.|++|.|+|.|.+|..++++++.+|+ +|++.+++.+..+...+.+... .++.+.+.+ .|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHHHH------SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhcch-----hhhhhhhh
Confidence 468999999999999999999999999 9999999888766455555421 223333333 78888766
Q ss_pred CCH-----HHHHHHHHHhccCCceEEEEc
Q 017000 273 GNV-----SVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 273 g~~-----~~~~~~~~~l~~~~G~iv~~g 296 (379)
... -.-...+..++++ ..+|.++
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~a 127 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVA 127 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred ccccccceeeeeeeeeccccc-eEEEecc
Confidence 531 1124566777775 6666553
No 167
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.01 E-value=0.0099 Score=52.64 Aligned_cols=79 Identities=23% Similarity=0.347 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCC---ceEe--CCCCCCchHHHHHHHhcC--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFV--NPKDHDKPIQQVLVDLTD--GG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~---~~v~--~~~~~~~~~~~~i~~~~~--~~ 264 (379)
++.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.. -+.+ |..+ ..++.+.+.+... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999988888899 799998887765443 33321 1222 2222 2334444443321 37
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 168
>PRK14967 putative methyltransferase; Provisional
Probab=96.93 E-value=0.046 Score=48.20 Aligned_cols=98 Identities=22% Similarity=0.217 Sum_probs=64.0
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCC
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
....++++++||-.|+|. |.+++.+++. ++.+|++++.+++..+.+++ .+....+... ++.+. ...+
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~----d~~~~---~~~~ 100 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG----DWARA---VEFR 100 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC----chhhh---ccCC
Confidence 334577899999999986 8888888875 65589999999987775553 3433222221 22221 1223
Q ss_pred CccEEEEcCCC---------------------------HHHHHHHHHHhccCCceEEEE
Q 017000 264 GVDYSFECIGN---------------------------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 264 ~~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.||+|+...+- ...+..+.+.|+++ |+++.+
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 79998853110 12456778889996 998865
No 169
>PRK04148 hypothetical protein; Provisional
Probab=96.91 E-value=0.0051 Score=49.15 Aligned_cols=87 Identities=23% Similarity=0.313 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
.++.+|+++|.| .|...++.+..+|. .|++++.+++..+.+++.+...+.+.-- ..++ ++ .+++|++..+-
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~-----~~-y~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL-----EI-YKNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH-----HH-HhcCCEEEEeC
Confidence 356889999999 88755666667899 9999999999999999988765543211 1111 11 13799999998
Q ss_pred CCHHHHHHHHHHhccC
Q 017000 273 GNVSVMRAALECCHKG 288 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (379)
..++..+.+++..++-
T Consensus 86 pp~el~~~~~~la~~~ 101 (134)
T PRK04148 86 PPRDLQPFILELAKKI 101 (134)
T ss_pred CCHHHHHHHHHHHHHc
Confidence 8888777777776664
No 170
>PRK12742 oxidoreductase; Provisional
Probab=96.89 E-value=0.021 Score=50.47 Aligned_cols=101 Identities=22% Similarity=0.264 Sum_probs=62.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC-ChhhHH-HHHhcCCceE-eCCCCCCchHHHHHHHhcCCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~-~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~d~vi 269 (379)
++++|||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999988 9999999999999999 7776644 444443 3344555432 23322 1223333332 23699999
Q ss_pred EcCCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 017000 270 ECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 270 d~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+++|.. + ....++..+... |+++.++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 998751 0 113444556665 8999887643
No 171
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.012 Score=54.27 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCC--ceE---eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~--~~v---~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
+|++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999999999 899998988776544 34442 111 23333 122333333322 247
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 172
>PRK08017 oxidoreductase; Provisional
Probab=96.85 E-value=0.0086 Score=53.71 Aligned_cols=77 Identities=25% Similarity=0.353 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE-eCCCCCCchH---HHHHHHhcCCCccEEEE
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPI---QQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v-~~~~~~~~~~---~~~i~~~~~~~~d~vid 270 (379)
++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+++.++..+ .|..+ ...+ .+.+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999999999 89999999988887777776543 23332 1222 22333333357899998
Q ss_pred cCCC
Q 017000 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 173
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.78 E-value=0.016 Score=54.98 Aligned_cols=95 Identities=20% Similarity=0.200 Sum_probs=65.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcC---C-ceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---V-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg---~-~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.+|||+|+|.+|..+++.+.+.|-.+|++.+++.++.+.+.... . ...+|..+ .+.+.+.++ ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~-----~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIK-----DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHh-----cCCEEEEe
Confidence 57999999999999999998888459999999999888887654 2 22455444 123333332 35999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+.......+-.|++.+ =.++....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~ 100 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSY 100 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEccc
Confidence 99866554444555553 44555544
No 174
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0059 Score=57.31 Aligned_cols=79 Identities=20% Similarity=0.358 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCceE---eCCCCCCchHHHHHHHh--cCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDL--TDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~--~~~ 263 (379)
++++|||+|+ |++|.++++.+...|+ +|+.+++++++++.+ ++.|.+.. .|..+ .++..+.+.+. ..+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 5689999998 9999999999999999 899999988876533 34555432 23333 12222222221 124
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 175
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.77 E-value=0.0096 Score=49.13 Aligned_cols=92 Identities=26% Similarity=0.362 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +. .+.+.+ ...|++|-+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence 4578999999999999999999999999 999999999877666666653 21 122221 258999999
Q ss_pred CCCHHHH-HHHHHHhccCCceEEEEccC
Q 017000 272 IGNVSVM-RAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 272 ~g~~~~~-~~~~~~l~~~~G~iv~~g~~ 298 (379)
+|..+.+ .+-+..|+++ ..+..+|..
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 9986643 5677888885 555555543
No 176
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.75 E-value=0.014 Score=50.81 Aligned_cols=104 Identities=22% Similarity=0.237 Sum_probs=73.3
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCCC
Q 017000 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGG 264 (379)
Q Consensus 190 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~ 264 (379)
++.+..++||=+|.+ +|+.++++|..+. -.+++.++.++++.+.+++ .|.+..+.-.. ..+..+.+.+...+.
T Consensus 55 ~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~gdal~~l~~~~~~~ 132 (219)
T COG4122 55 ARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-GGDALDVLSRLLDGS 132 (219)
T ss_pred HHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-cCcHHHHHHhccCCC
Confidence 445677899888874 6889999999887 3489999999999887764 56655221111 025566666644558
Q ss_pred ccEEE-EcC--CCHHHHHHHHHHhccCCceEEEEc
Q 017000 265 VDYSF-ECI--GNVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 265 ~d~vi-d~~--g~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
||+|| |+. -.+..++.++.+|+++ |.+|.=.
T Consensus 133 fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 133 FDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred ccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 99988 432 2367899999999996 8776443
No 177
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.74 E-value=0.02 Score=56.28 Aligned_cols=80 Identities=24% Similarity=0.343 Sum_probs=51.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh--hh-HHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCc
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~--~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
.+++++||+|+ |++|..+++.+...|+ +|+++++.+ ++ .+...+++...+ .|..+ .......+.... .+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCC
Confidence 35789999988 9999999999999999 788887643 22 233344554332 34433 122222222221 2379
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++|+++|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999883
No 178
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.023 Score=50.73 Aligned_cols=101 Identities=22% Similarity=0.260 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh-hHHH----HHhcCCce-E--eCCCCCCchHHHHHHHhcC--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD-- 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~~~~----~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~-- 262 (379)
+++++||+|+ |.+|..++..+...|+ +|+++.++.+ +.+. ++..+... . .|..+ .++....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4689999998 9999999998888999 7888777543 3222 22223321 1 23332 1233333333221
Q ss_pred CCccEEEEcCCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 017000 263 GGVDYSFECIGNV-------------------SVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 263 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+++|+++.++|.. ..++.+...+..+ |+++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 2345555555664 88988865
No 179
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.73 E-value=0.014 Score=45.05 Aligned_cols=92 Identities=25% Similarity=0.278 Sum_probs=61.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEeCChhhHHHHHhcC----C-ce-EeCCCCCCchHHHHHHHhcCCCcc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFG----V-TE-FVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~-~g~~~vi~v~~~~~~~~~~~~lg----~-~~-v~~~~~~~~~~~~~i~~~~~~~~d 266 (379)
||++||-+|+| .|..++.+++. .++ +|++++.+++-.+.+++.- . +. -+...+ + . ......+++|
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d----~-~-~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD----A-E-FDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC----C-H-GGTTTSSCEE
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc----c-c-cCcccCCCCC
Confidence 68999999986 37778888884 567 8999999999888777532 1 11 121222 2 1 1111122799
Q ss_pred EEEEcC-CC---------HHHHHHHHHHhccCCceEEE
Q 017000 267 YSFECI-GN---------VSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 267 ~vid~~-g~---------~~~~~~~~~~l~~~~G~iv~ 294 (379)
+|+... .. ...++.+.+.|+|+ |+++.
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 999876 22 12478899999996 99875
No 180
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.73 E-value=0.0064 Score=47.84 Aligned_cols=100 Identities=22% Similarity=0.324 Sum_probs=66.9
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHHHhc
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~~ 261 (379)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++... ++..+. .. ... ..
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~--~~---~~~-~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA--PE---ALE-DS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc--cc---cCh-hh
Confidence 444567788999999975 8888899988754589999999987776643 34332 222111 00 011 11
Q ss_pred CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 017000 262 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.+|+|+-..+. ..+++.+.+.|+++ |+++..
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 2379999875433 34788999999997 998864
No 181
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.012 Score=51.85 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE--eCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
++|||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+++...+ .|..+ .+++.+.+.....+++|++|.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 47899988 9999999888888999 89999988877665555432222 23222 12333444444334799999887
Q ss_pred CC
Q 017000 273 GN 274 (379)
Q Consensus 273 g~ 274 (379)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 54
No 182
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.029 Score=50.74 Aligned_cols=78 Identities=22% Similarity=0.269 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .+.+... + .|..+ ..++...+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999989999 899998877654332 2223222 1 23332 123333333332 23
Q ss_pred CccEEEEcCC
Q 017000 264 GVDYSFECIG 273 (379)
Q Consensus 264 ~~d~vid~~g 273 (379)
++|++|+++|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998876
No 183
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.69 E-value=0.021 Score=49.99 Aligned_cols=101 Identities=20% Similarity=0.269 Sum_probs=68.3
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHH
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 258 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~ 258 (379)
+.+...+++|++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+.. ..+
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~-~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT-LGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc-cCC-----
Confidence 4566678999999999886 47777888887763 389999999887766654 44322 2222110 000
Q ss_pred HhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 259 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
...+.||+|+-..........+++.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 11237999876555556678888999997 998764
No 184
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.66 E-value=0.0063 Score=51.16 Aligned_cols=101 Identities=22% Similarity=0.241 Sum_probs=65.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC-CCCC--------------CchHHHHHHH
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDH--------------DKPIQQVLVD 259 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~-~~~~--------------~~~~~~~i~~ 259 (379)
..+|+|+|+|.+|+.|+.+++.+|+ +++..+...++.+..+..+...+.. +.+. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3889999999999999999999999 8999999999888888887755432 1110 1222223333
Q ss_pred hcCCCccEEEEcCC-----CHH-HHHHHHHHhccCCceEEEEccC
Q 017000 260 LTDGGVDYSFECIG-----NVS-VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 260 ~~~~~~d~vid~~g-----~~~-~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
... .+|++|-+.- .+. .-++.++.|+++ ..|+.+...
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 221 4788885311 122 236677788885 888888653
No 185
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.023 Score=53.46 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCceE---eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+ ..+..+.+.... .+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4689999988 9999999999999999 899888888765533 23454332 23333 122322222221 24
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 186
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.027 Score=50.62 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
+|.++||+|+ |.+|...++.+...|+ +|+.+++++++.+...+ .+... . .|..+ ...+...+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 4689999988 9999999988888999 78888787776544433 33322 1 22222 122333333322 247
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 187
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.026 Score=50.94 Aligned_cols=79 Identities=30% Similarity=0.387 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCce-E--eCCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++... + .|..+ ..++.+.+.... .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999999999999999 899998887755433 4444322 2 23332 123333333321 23689
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 188
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.64 E-value=0.0031 Score=54.84 Aligned_cols=101 Identities=25% Similarity=0.324 Sum_probs=66.6
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEeCChhhHHHH----HhcCCceE-eCCCCCCchHHHHHHH
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRA----KNFGVTEF-VNPKDHDKPIQQVLVD 259 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~-~vi~v~~~~~~~~~~----~~lg~~~v-~~~~~~~~~~~~~i~~ 259 (379)
+++...++||++||-+|+| .|+.++-+++..|.. +|+.++..++-.+.+ +.++.+.+ +...+ . ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g-----~~g 135 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--G-----SEG 135 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G-----GGT
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--h-----hhc
Confidence 4566779999999999986 588999999988853 699999988654444 34566432 21222 1 011
Q ss_pred hcC-CCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 260 LTD-GGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 260 ~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
... ++||.|+-+.+-+..-...++.|+++ |++|..
T Consensus 136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 122 37999998877766667888999997 999863
No 189
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.013 Score=52.65 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~d~v 268 (379)
+|++|||+|+ |.+|..+++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ...+...+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999999999999 899998887765443 34443222 23333 122222333221 1368999
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
++++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 190
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.62 E-value=0.038 Score=55.09 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=39.4
Q ss_pred hccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH
Q 017000 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~ 235 (379)
...+.+.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4455678899999998 9999999999989999 899888988876543
No 191
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.57 E-value=0.015 Score=52.85 Aligned_cols=101 Identities=24% Similarity=0.347 Sum_probs=63.1
Q ss_pred hhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce--EeCCCCCCchHHHHHH
Q 017000 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLV 258 (379)
Q Consensus 185 al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~i~ 258 (379)
.+.+++++++|++||-+|+| -|-.+..+|+..|+ +|+++..+++..+.++ +.|... -+...+ + +
T Consensus 53 ~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~ 122 (273)
T PF02353_consen 53 LLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----R 122 (273)
T ss_dssp HHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----G
T ss_pred HHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----c
Confidence 35788899999999999987 57777788888899 9999999998877664 455422 111111 1 1
Q ss_pred HhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017000 259 DLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 259 ~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++. +.||.|+. ..|. +..+..+.+.|+|+ |++++-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 221 27898774 3332 46789999999997 99875543
No 192
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.016 Score=51.53 Aligned_cols=77 Identities=29% Similarity=0.425 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCceE-eCCCCCCchHHHHHHHhcCCCccEEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~d~vid 270 (379)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+. ..+...+ .|..+ .....+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence 4689999998 9999999999999999 8999988887665443 3444322 23333 1122222222 237999999
Q ss_pred cCCC
Q 017000 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 8874
No 193
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.53 E-value=0.0098 Score=54.51 Aligned_cols=126 Identities=27% Similarity=0.381 Sum_probs=69.3
Q ss_pred cCcceEecCCCCCccccccccccchhhcch-hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHH
Q 017000 156 HDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (379)
Q Consensus 156 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a-l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~ 234 (379)
+.+.++.|++.+.+-... ..+|.+-. ++.. -..+|++||=+|+| .|.+++..+ .+|+++|++++.++...+.
T Consensus 127 ~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~-~~~~g~~vLDvG~G-SGILaiaA~-klGA~~v~a~DiDp~Av~~ 199 (295)
T PF06325_consen 127 PDEIVIEIDPGMAFGTGH----HPTTRLCLELLEK-YVKPGKRVLDVGCG-SGILAIAAA-KLGAKKVVAIDIDPLAVEA 199 (295)
T ss_dssp TTSEEEEESTTSSS-SSH----CHHHHHHHHHHHH-HSSTTSEEEEES-T-TSHHHHHHH-HTTBSEEEEEESSCHHHHH
T ss_pred CCcEEEEECCCCcccCCC----CHHHHHHHHHHHH-hccCCCEEEEeCCc-HHHHHHHHH-HcCCCeEEEecCCHHHHHH
Confidence 445667776665444332 22222110 1121 16788999998774 244444333 4599899999999876555
Q ss_pred HHh----cCCce-E-eCCCCCCchHHHHHHHhcCCCccEEEEcCCCH---HHHHHHHHHhccCCceEEEEccCC
Q 017000 235 AKN----FGVTE-F-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV---SVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 235 ~~~----lg~~~-v-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+++ -|... + +.... + ...+.||+|+--.-.. .+++.+.+.++++ |.+++-|...
T Consensus 200 a~~N~~~N~~~~~~~v~~~~---~-------~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 200 ARENAELNGVEDRIEVSLSE---D-------LVEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp HHHHHHHTT-TTCEEESCTS---C-------TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred HHHHHHHcCCCeeEEEEEec---c-------cccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 543 22221 1 21111 1 1125799999554442 3455666778996 9999988754
No 194
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.011 Score=53.14 Aligned_cols=82 Identities=26% Similarity=0.232 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC-c--eE--eCCCCCCchHHHHHHHhc--C
Q 017000 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-T--EF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 191 ~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~-~--~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
..-++.++||+|+ |.+|..++..+...|+ +|+.++++++..+.+.+... . .+ .|..+ ...+.+.+.+.. .
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERF 84 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 3457899999988 9999999999999999 79999888776554443221 1 12 23322 122222222221 1
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|+||+++|.
T Consensus 85 ~~~d~vi~~ag~ 96 (264)
T PRK12829 85 GGLDVLVNNAGI 96 (264)
T ss_pred CCCCEEEECCCC
Confidence 379999998875
No 195
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.015 Score=51.33 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHH-H---HHhcCCceE-eCCCCCCchHHHHHHHhc--CCCc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-R---AKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~-~---~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.. . +...+...+ .|..+ ..++...+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 4789999988 9999999998888899 7999988765532 2 222333222 22222 122322232221 2379
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|+|++++|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998774
No 196
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.047 Score=48.63 Aligned_cols=79 Identities=24% Similarity=0.307 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHH-HHhcCCceE---eCCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
++++|||+|+ |.+|..+++.+...|+ +|+++++++++.+. .++++.... .|..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4689999988 9999999999999999 89999888765543 334554321 22222 122222222221 23689
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 197
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.45 E-value=0.012 Score=53.21 Aligned_cols=78 Identities=21% Similarity=0.232 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc-CCce-E--eCCCCCCchHHHHHHHhcC--CCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~~--~~~d 266 (379)
+++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+. +... . .|..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999999989999 899998888776655443 3221 1 23222 1223333333221 3689
Q ss_pred EEEEcCC
Q 017000 267 YSFECIG 273 (379)
Q Consensus 267 ~vid~~g 273 (379)
++++++|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999886
No 198
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.017 Score=51.84 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce--E--eCCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
++++|||+|+ |.+|..+++.+...|+ +|+.++++++..+.+.++.... . .|..+ ...+...+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999998888999 8999988877655554432221 2 23222 122333233221 13689
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 199
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.035 Score=49.44 Aligned_cols=79 Identities=24% Similarity=0.195 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
++.++||+|+ |.+|..++..+...|+ +|+++++++++.+.+ ++.+... ++ |..+ ..+....+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 888888877755433 2233322 22 3322 122222222221 14
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 200
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.44 E-value=0.022 Score=53.24 Aligned_cols=80 Identities=18% Similarity=0.229 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-----cCCce----EeCCCCCCchHHHHHHHhcCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTE----FVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~----v~~~~~~~~~~~~~i~~~~~~ 263 (379)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+ .+... ..|..+...+..+.+.+...+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4899999998 9999998888888899 89999999887654432 11111 223332112334444444444
Q ss_pred -CccEEEEcCCC
Q 017000 264 -GVDYSFECIGN 274 (379)
Q Consensus 264 -~~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799988763
No 201
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.024 Score=49.73 Aligned_cols=77 Identities=18% Similarity=0.254 Sum_probs=52.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
+++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+... ..|..+ ...+.+.+.....+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 47899987 9999999888878899 8999988888777666665432 223333 123333333333337999999876
Q ss_pred C
Q 017000 274 N 274 (379)
Q Consensus 274 ~ 274 (379)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 202
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.42 E-value=0.017 Score=50.32 Aligned_cols=101 Identities=20% Similarity=0.195 Sum_probs=67.1
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHH----hcCCc---eEeCCCCCCchHHHHH
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVT---EFVNPKDHDKPIQQVL 257 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~----~lg~~---~v~~~~~~~~~~~~~i 257 (379)
+.+...++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.++ ..+.. .++..+. .+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~-----~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG-----KRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc-----ccCC
Confidence 3455678899999999886 4777788888775 238999999988665554 34432 2222221 1111
Q ss_pred HHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 258 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
...+.||.|+-+.........+++.|+++ |+++..
T Consensus 138 --~~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 --EKHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred --ccCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 01237999887656556667888999997 998764
No 203
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.018 Score=51.70 Aligned_cols=80 Identities=20% Similarity=0.264 Sum_probs=53.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCc-eEe--CCCCCCchHHHHHHHhc--C
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
..+++|||+|+ |.+|..++..+...|+ +|+++.+++++.+.+.+ .+.. .++ |..+ ..++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 45799999988 9999999999999999 89999888877654432 1221 222 3222 133333333321 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+.+|++|++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999999883
No 204
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.021 Score=51.52 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-----cCCceE--e--CCCCCCchHHHHHHHh
Q 017000 192 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF--V--NPKDHDKPIQQVLVDL 260 (379)
Q Consensus 192 ~~~g~~VlI~Ga-g-~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v--~--~~~~~~~~~~~~i~~~ 260 (379)
+.+++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ ++...+ + |..+ ..+....+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 445799999987 6 799999999999999 78888888766544322 443222 2 3322 12233333322
Q ss_pred c--CCCccEEEEcCCC
Q 017000 261 T--DGGVDYSFECIGN 274 (379)
Q Consensus 261 ~--~~~~d~vid~~g~ 274 (379)
. .+++|++|+++|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 2479999999884
No 205
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.42 E-value=0.17 Score=43.92 Aligned_cols=93 Identities=22% Similarity=0.214 Sum_probs=60.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-hHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... .+..+.+.|--..+ ..+... +. + .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~~~~---~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARCFDA---DI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCCCCH---HH---h--CCcEEEEECC
Confidence 47899999999999999999999999 8888865432 22233333321122 122111 11 1 3699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017000 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.++.-..+....+.. |..|....
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECC
Confidence 9976555566666664 88776544
No 206
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.42 E-value=0.015 Score=56.12 Aligned_cols=76 Identities=13% Similarity=0.117 Sum_probs=54.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
-.+.+|||+|+|.+|.+++.-+...|+.+++++.++.+|.+.+ .+++...++.+ +.+.+.. ..+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHh-ccCCEEEEC
Confidence 4678999999999999999999999987899999998775444 44542222222 1122221 258999999
Q ss_pred CCCHHH
Q 017000 272 IGNVSV 277 (379)
Q Consensus 272 ~g~~~~ 277 (379)
++.++.
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998654
No 207
>PRK00811 spermidine synthase; Provisional
Probab=96.41 E-value=0.021 Score=52.31 Aligned_cols=99 Identities=12% Similarity=0.098 Sum_probs=64.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce---EeCCCC---CCchHHHHHHHhcCCCccE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE---FVNPKD---HDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~---v~~~~~---~~~~~~~~i~~~~~~~~d~ 267 (379)
..++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-... .++... ...+..+.+.. ..+.+|+
T Consensus 76 ~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~-~~~~yDv 153 (283)
T PRK00811 76 NPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAE-TENSFDV 153 (283)
T ss_pred CCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhh-CCCcccE
Confidence 468999998864 666777787767779999999999888887642100 000000 01233334443 3448999
Q ss_pred EEEcCCC----------HHHHHHHHHHhccCCceEEEE
Q 017000 268 SFECIGN----------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
||--... .++++.+.+.|+++ |.++..
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 8843211 34567888999997 998865
No 208
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.39 E-value=0.02 Score=51.70 Aligned_cols=79 Identities=23% Similarity=0.260 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCce-Ee--CCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++... .+ |..+ ..+....+.+.. .+.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4789999988 9999999999989999 89999898877665543 33211 22 2222 122333333322 23799
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99998873
No 209
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.38 E-value=0.15 Score=44.23 Aligned_cols=91 Identities=12% Similarity=0.011 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-h-HHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-~-~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.|.+|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ..+.... +. ...-.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~----~~----~~~l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE----FE----PSDIVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC----CC----hhhcCCceEEEEc
Confidence 57899999999999999988888998 7888865421 2 222222 21 1111111 10 0001268999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++.++ ++..+...+.. +.++....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99966 66655555564 66766644
No 210
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.0082 Score=58.93 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=62.8
Q ss_pred hccCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc-eEeCCCCCCchHHHHHHHhc
Q 017000 188 NTAKVEPGSIVA----VFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 188 ~~~~~~~g~~Vl----I~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~ 261 (379)
...++++|+.+| |+|+ |++|.+++|+++..|+ .|+++...+++....+..+.+ .+++.+. ..+.+.+...+
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG--ITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC--CCCHHHHHHHH
Confidence 456788899988 8865 9999999999999999 888886665544333334444 3454443 23333333221
Q ss_pred CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 017000 262 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 262 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.++...+..+.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 3466677778885 8888887643
No 211
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.018 Score=51.99 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+... + .|..+ .....+.+.+.. .+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999989999 89999888776543322 23221 2 23333 122222222221 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 212
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.36 E-value=0.067 Score=46.08 Aligned_cols=104 Identities=22% Similarity=0.331 Sum_probs=63.1
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHHH
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~ 259 (379)
+.....+.++++||=+|+| .|..++.+++.....+|++++.+++..+.+++ ++... ++.. +..+.+..
T Consensus 32 l~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~-----d~~~~~~~ 105 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG-----SAPECLAQ 105 (196)
T ss_pred HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC-----chHHHHhh
Confidence 3455567889999888774 34455666665533499999999988776653 45432 2221 22222222
Q ss_pred hcCCCccE-EEEcCCC-HHHHHHHHHHhccCCceEEEEcc
Q 017000 260 LTDGGVDY-SFECIGN-VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 260 ~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.. ..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus 106 ~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22 22344 4443222 46788999999997 99887743
No 213
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.35 E-value=0.027 Score=47.25 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=63.5
Q ss_pred cccccccchhhcchhhhccCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCC
Q 017000 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 172 aa~l~~~~~ta~~al~~~~~~~~g~~VlI~Gag~-vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
....|+...++...+.+...--.|.+|||+|+|. +|..++..++..|+ +|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~-------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK-------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence 3445554444444333333345789999999986 59989999999999 7888866521
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.+. .+|+||.+++.++.+.. ..++++ -.++.++.+
T Consensus 80 -~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 80 -NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred -hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 1222221 48999999998764443 246664 677777764
No 214
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.35 E-value=0.13 Score=42.70 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=56.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
.|.+|||+|+|.+|.--++.+...|+ +|++++ ++..+.+.+++.-. ..... + .+..-.++|+|+-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~----~----~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT----F----SNDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc----c----ChhcCCCceEEEECCC
Confidence 57999999999999999998888999 788773 33333334454211 11111 1 0111126899999988
Q ss_pred CHHHHHHHHHHhccCCceEEEE
Q 017000 274 NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
..+ ++..+..+++. +.++..
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEE
Confidence 855 77766666664 445544
No 215
>PRK09186 flagellin modification protein A; Provisional
Probab=96.34 E-value=0.062 Score=48.09 Aligned_cols=78 Identities=22% Similarity=0.397 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-Hhc----CCce----EeCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE----FVNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l----g~~~----v~~~~~~~~~~~~~i~~~~-- 261 (379)
++++|||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ .++ +... ..|..+ ...+.+.+.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 888888887765433 222 2221 123332 233333343322
Q ss_pred CCCccEEEEcCC
Q 017000 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~~~d~vid~~g 273 (379)
.+++|+++++++
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 236899999875
No 216
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.024 Score=51.50 Aligned_cols=78 Identities=27% Similarity=0.313 Sum_probs=52.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCceE--eCCCCCCchHHHHHHHhc--CCCccEE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v--~~~~~~~~~~~~~i~~~~--~~~~d~v 268 (379)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++..++ .|..+ ..++.+.+.+.. .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 579999988 9999999998888999 788888888776544 34441222 23333 133333333322 2479999
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|+++|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999874
No 217
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.34 E-value=0.028 Score=49.60 Aligned_cols=104 Identities=25% Similarity=0.293 Sum_probs=74.2
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHh
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~ 260 (379)
+..+.++.||++|+=.|.| .|.+++-||++.|- .+|+..+..++..+.|++ +|....+.... .| +++.
T Consensus 86 I~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~D----v~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GD----VREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--cc----cccc
Confidence 3567789999999988875 58888889988875 699999999988777764 34433221111 12 2222
Q ss_pred cCC-CccEEE-EcCCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 261 TDG-GVDYSF-ECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 261 ~~~-~~d~vi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
..+ .+|.|| |.--..+.++.+.+.|+++ |.++.+..
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 223 788755 7666678899999999997 99998854
No 218
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.33 E-value=0.023 Score=56.36 Aligned_cols=73 Identities=27% Similarity=0.300 Sum_probs=54.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
+.+|++|+|+|.|..|++++.+++..|+ +|++.+..+++.+.++++|+..+ .... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEEC
Confidence 5578999999999999999999999999 89999887776666777887433 2211 11111 147999988
Q ss_pred CCCH
Q 017000 272 IGNV 275 (379)
Q Consensus 272 ~g~~ 275 (379)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 7763
No 219
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.32 E-value=0.01 Score=54.00 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=39.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~ 237 (379)
+|++|||+|||+.+.+++.-+...|+.+|+++.++.+|.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57999999999999999999999998899999999988766654
No 220
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.32 E-value=0.01 Score=45.39 Aligned_cols=89 Identities=21% Similarity=0.214 Sum_probs=58.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
.|.+|||+|+|.+|..-++.+...|+ +|++++... +..++ .-... . ..+ .+ .-.++++|+-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~--~i~~~-~----~~~----~~-~l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEG--LIQLI-R----REF----EE-DLDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHT--SCEEE-E----SS-----GG-GCTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhh--HHHHH-h----hhH----HH-HHhhheEEEecCC
Confidence 57899999999999999999999999 899987764 11121 11111 1 112 11 1137999999998
Q ss_pred CHHHHHHHHHHhccCCceEEEEccCC
Q 017000 274 NVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.+..-..+....+.. |.++......
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p 94 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDP 94 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCc
Confidence 977666666666664 9999886643
No 221
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.31 E-value=0.033 Score=48.33 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..+++.+..+|..+++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46899999999999999999999999899999876
No 222
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.028 Score=50.90 Aligned_cols=79 Identities=20% Similarity=0.327 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-c----CCce-E--eCCCCCCchHHHHHHHhc-CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTE-F--VNPKDHDKPIQQVLVDLT-DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~-v--~~~~~~~~~~~~~i~~~~-~~ 263 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ + +.+. . .|..+ ..+....+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4789999988 9999999999999999 89999888776544332 1 3221 2 23332 123333333322 24
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 223
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.025 Score=51.52 Aligned_cols=79 Identities=23% Similarity=0.244 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc-e-E--eCCCCCCchHHHHHHHhcC--CCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-E-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~-v--~~~~~~~~~~~~~i~~~~~--~~~d 266 (379)
.+++|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.... . . .|..+ .......+..... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999988 9999999999888999 899999988877655543221 1 1 23332 1223333333221 3689
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999886
No 224
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.072 Score=48.34 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=48.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce----EeCCCCCCchHHHHHHHhc--CCCc
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~----v~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899988 9999999999888999 788888877654433 2234322 133333 122222222221 2369
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++|+++|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 225
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.24 E-value=0.019 Score=51.16 Aligned_cols=79 Identities=23% Similarity=0.296 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcC--Cc-eEe--CCCCCCchHHHHHHHh--cCCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VT-EFV--NPKDHDKPIQQVLVDL--TDGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg--~~-~v~--~~~~~~~~~~~~i~~~--~~~~ 264 (379)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. .+. .. .++ |..+ ...+...+.+. ..+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4679999988 9999999998888899 7999999887655432 222 11 122 2222 13333333332 1237
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+||.++|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 226
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.24 E-value=0.04 Score=48.69 Aligned_cols=93 Identities=18% Similarity=0.201 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEeCC----hhh--------HHHHHhcCCceEeCCCCCCchHHHHHH
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~--~vi~v~~~----~~~--------~~~~~~lg~~~v~~~~~~~~~~~~~i~ 258 (379)
-.+.+|+|+|+|+.|..++..+...|+. +++.++++ .+| .++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~--~~l~~~l- 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G--GTLKEAL- 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c--CCHHHHH-
Confidence 4678999999999999999988899997 89999988 443 33445443211 0 0 1233333
Q ss_pred HhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 259 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.++|++|++++...+-...++.+.++ ..+..+..
T Consensus 96 ----~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn 129 (226)
T cd05311 96 ----KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN 129 (226)
T ss_pred ----hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC
Confidence 14899999987433334666777774 66555543
No 227
>PRK06484 short chain dehydrogenase; Validated
Probab=96.23 E-value=0.059 Score=53.90 Aligned_cols=103 Identities=26% Similarity=0.367 Sum_probs=68.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceE---eCCCCCCchHHHHHHHhc--CCCc
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF---VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v---~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
..|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.... .|..+ ..+..+.+.+.. .+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 45789999988 9999999999999999 89999998877665543 443321 23333 123333333322 2479
Q ss_pred cEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 266 DYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 266 d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
|++|+++|.. .+.+.++..++.+ |+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988741 1134445556664 899988764
No 228
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.024 Score=50.87 Aligned_cols=79 Identities=20% Similarity=0.224 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce---EeCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~---v~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.|+++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. +.+.+. ..|..+ ...+.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999999999999 8999988877654433 223222 123332 123333333321 24
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998774
No 229
>PRK06128 oxidoreductase; Provisional
Probab=96.21 E-value=0.059 Score=49.77 Aligned_cols=102 Identities=19% Similarity=0.194 Sum_probs=61.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh--h----HHHHHhcCCceE---eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--K----FDRAKNFGVTEF---VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~----~~~~~~lg~~~v---~~~~~~~~~~~~~i~~~~-- 261 (379)
.+++|||+|+ |++|..++..+...|+ +|+.+.++.+ + .+.+++.|.... .|..+ .....+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999998888999 7777654332 1 223334454322 12222 122223333221
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+++|++|+++|.. .+++.++..+.++ |+++.++..
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 23799999988731 1234455556675 899888654
No 230
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.18 E-value=0.072 Score=49.63 Aligned_cols=95 Identities=16% Similarity=0.148 Sum_probs=60.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEe-CCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
+|||+|+ |-+|..++..+...|. +|+++.++.++...+...+...+. |..+ ...+ .+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~l----~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PETL----PPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHHH----HHHHC-CCCEEEECCCC
Confidence 6999998 9999999999988998 899998887766555555654332 2222 1222 22222 58999998763
Q ss_pred HH------------HHHHHHHHhccC-CceEEEEccC
Q 017000 275 VS------------VMRAALECCHKG-WGTSVIVGVA 298 (379)
Q Consensus 275 ~~------------~~~~~~~~l~~~-~G~iv~~g~~ 298 (379)
.. ....+++.++.. -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 10 113344555443 1378887764
No 231
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.18 E-value=0.031 Score=49.81 Aligned_cols=79 Identities=20% Similarity=0.306 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh--hHHHHHhcCCce-E--eCCCCCCchHHHHHHHhcC--CCc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~ 265 (379)
.|++|||+|+ |.+|...+..+...|+ +|+.+++++. ..+.+++++... + .|..+ ..++...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4789999988 9999999999988999 8888877652 223334444322 2 23322 2333333333221 369
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 232
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.036 Score=49.97 Aligned_cols=79 Identities=24% Similarity=0.348 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-c--CCc-eEe--CCCCCCchHHHHHHHhc-CCCc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F--GVT-EFV--NPKDHDKPIQQVLVDLT-DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l--g~~-~v~--~~~~~~~~~~~~i~~~~-~~~~ 265 (379)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +.. +.+ |..+ .....+.+.... .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999987 9999999998888999 89999888876654432 1 211 122 2222 122222222221 2478
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998875
No 233
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.17 E-value=0.036 Score=50.83 Aligned_cols=43 Identities=28% Similarity=0.360 Sum_probs=37.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
.+++|+|+|+|+.|.+++..+..+|+++|++++++.+|.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5689999999999999999999999989999999988766543
No 234
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.031 Score=49.84 Aligned_cols=79 Identities=27% Similarity=0.316 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCc-eE--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. +.+.. +. .|..+ .......+.+.. .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4688999988 9999999998888999 8999988876543332 12221 11 23322 122222222221 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|+||+++|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998883
No 235
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.16 E-value=0.012 Score=51.68 Aligned_cols=101 Identities=20% Similarity=0.246 Sum_probs=65.9
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHH----hcCCce--EeCCCCCCchHHHHHH
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLV 258 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~i~ 258 (379)
+.+...++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.++ ++|.+. ++..+ ..+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d-----~~~~~- 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD-----GTQGW- 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC-----cccCC-
Confidence 4456678899999999886 46677778877653 36999999988776655 344432 22111 11100
Q ss_pred HhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 259 DLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 259 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
...+.||+|+-..........+.+.|+++ |+++..
T Consensus 142 -~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 -EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred -cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 01237998885544445567788999997 998764
No 236
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.031 Score=50.07 Aligned_cols=74 Identities=16% Similarity=0.113 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce-E--eCCCCCCchHHHHHHHhcCCCcc
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~~~~~d 266 (379)
+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.+ .+... + .|..+ . +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 468999988 9999999999999999 88888887765544332 33221 1 23322 1 123333334799
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 237
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.12 E-value=0.038 Score=50.27 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=65.7
Q ss_pred ccccccchhhcchhhhccC-CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCC
Q 017000 173 CLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 173 a~l~~~~~ta~~al~~~~~-~~~g~~VlI~Gag~-vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
..+||+....+. +++..+ --.|++|+|+|.|. +|.-+++++...|+ +|+.+.+...
T Consensus 136 ~~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------- 193 (286)
T PRK14175 136 TFVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------- 193 (286)
T ss_pred CCCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch--------------------
Confidence 345655444444 344443 34799999999965 99999999999999 7887744221
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.++ .+|+||.++|.+..+.. ..++++ ..++.+|..
T Consensus 194 -~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 194 -DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred -hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 1222221 48999999999876665 457886 888888874
No 238
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.045 Score=49.78 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc-CCce-E--eCCCCCCchHHHHHHHhc--CCCccE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~--~~~~d~ 267 (379)
+++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+. +... . .|..+ ...+.+.+.... .+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999988 9999999988888898 899998888776554432 2211 1 22222 122323333221 237899
Q ss_pred EEEcCCC
Q 017000 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|+++|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999875
No 239
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.10 E-value=0.061 Score=49.95 Aligned_cols=91 Identities=22% Similarity=0.384 Sum_probs=62.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
.+|.|+|+|.+|...+..++..|. .+|+++++++++.+.+++.|....+. .+..+.+ ..+|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence 679999999999999998888884 37999999999888888887532111 1111111 258999999877
Q ss_pred HH---HHHHHHHHhccCCceEEEEcc
Q 017000 275 VS---VMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 275 ~~---~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.. .+..+...++++ ..++.+|.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 33 233334455664 66666654
No 240
>PLN02366 spermidine synthase
Probab=96.10 E-value=0.062 Score=49.75 Aligned_cols=102 Identities=17% Similarity=0.099 Sum_probs=66.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce--EeCCCCC---CchHHHHHHHhcCCCccE
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDH---DKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~---~~~~~~~i~~~~~~~~d~ 267 (379)
...++|||+|.|. |.++..+++.-+..+|++++.+++-.+.++++-... .++.... ..+..+.+++...+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568999998865 556778888777678999999998888887742210 0100000 123444454443447999
Q ss_pred EEEcCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017000 268 SFECIGN----------VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 268 vid~~g~----------~~~~~~~~~~l~~~~G~iv~~g 296 (379)
||--... .++++.+.++|+++ |.++..+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 8742222 35688999999997 9997653
No 241
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.09 E-value=0.045 Score=46.81 Aligned_cols=96 Identities=17% Similarity=0.135 Sum_probs=61.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCCCccE
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~ 267 (379)
++++++||-+|+| .|..++.+++.....+|++++.+++..+.+++ .+.+.+ .... .+..+ +. . .+.+|+
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~--~d~~~-~~-~-~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH--GRAEE-FG-Q-EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe--ccHhh-CC-C-CCCccE
Confidence 4458999999875 35656666665543499999999887766653 444321 1111 12211 11 1 237999
Q ss_pred EEEcCCC--HHHHHHHHHHhccCCceEEEE
Q 017000 268 SFECIGN--VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~g~--~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+-.... ...++.+.+.|+++ |+++.+
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~ 144 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLAL 144 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 9853222 46788899999997 999877
No 242
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.08 E-value=0.021 Score=52.37 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=50.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCce-EeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.+++|||+|+|+.|.+++.-+..+|+++|+++.++.+|.+.+. .++... +.... ..+.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 5789999999999999999999999989999999988765554 333211 11010 001111111 268999999
Q ss_pred CCC
Q 017000 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 775
No 243
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.041 Score=49.44 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCC--c-eE--eCCCCCCchHHHHHHHhc--CCCc
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--T-EF--VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~--~-~v--~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
+.+|||+|+ |++|..++..+...|+ +|+.++++.++.+.+.+ +.. + .. .|..+ ..++.+.+.+.. .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999987 9999999988888899 89999888877654432 211 1 11 23322 133333333322 2368
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998773
No 244
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.04 E-value=0.038 Score=49.26 Aligned_cols=78 Identities=21% Similarity=0.359 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhcC--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 263 (379)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999999999 899998887665433 2334332 1 22222 1223333333222 3
Q ss_pred CccEEEEcCC
Q 017000 264 GVDYSFECIG 273 (379)
Q Consensus 264 ~~d~vid~~g 273 (379)
++|++|+++|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 245
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.036 Score=51.10 Aligned_cols=79 Identities=23% Similarity=0.322 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |++|..+++.+...|+ +|++++++.++.+.+. +.+.+. + .|..+ ...+.+.+.... .+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3578999988 9999999998888899 8999999887655443 223322 2 23222 122333333221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 246
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.03 E-value=0.071 Score=46.16 Aligned_cols=81 Identities=31% Similarity=0.416 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
-.|.+|+|+|.|.+|..+++.+...|+ +|++++.++++.+.+.+ +|+. .++..+ +....+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEec
Confidence 367899999999999999999999999 89999998887766554 4643 332211 111157888766
Q ss_pred CCCHHHHHHHHHHhc
Q 017000 272 IGNVSVMRAALECCH 286 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~ 286 (379)
+.....-...+..++
T Consensus 93 A~~~~I~~~~~~~l~ 107 (200)
T cd01075 93 ALGGVINDDTIPQLK 107 (200)
T ss_pred ccccccCHHHHHHcC
Confidence 544333334444444
No 247
>PRK06196 oxidoreductase; Provisional
Probab=96.02 E-value=0.046 Score=50.91 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCceE--eCCCCCCchHHHHHHHhc--CCCccE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v--~~~~~~~~~~~~~i~~~~--~~~~d~ 267 (379)
.+.+|||+|+ |++|..++..+...|+ +|+++++++++.+.+. ++..-+. .|..+ ..+..+.+.+.. .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4689999988 9999999998888999 8999988877654432 2221122 23332 122333333322 247999
Q ss_pred EEEcCCC
Q 017000 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|+++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 248
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.99 E-value=0.035 Score=50.42 Aligned_cols=70 Identities=21% Similarity=0.179 Sum_probs=50.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEE
Q 017000 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vi 269 (379)
+...+++|+|+|+|+.+.+++..+..+|+.+|+++.++.+|.+.+.+ ++.. .. +.+ ....+|+||
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~~-------~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----WR-------PDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----ch-------hhc---ccccCCEEE
Confidence 34456799999999999999999999999889999999887665543 3311 10 011 112589999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+|+.-
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99753
No 249
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.035 Score=50.13 Aligned_cols=79 Identities=27% Similarity=0.331 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-----c-CCce---EeCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----F-GVTE---FVNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----l-g~~~---v~~~~~~~~~~~~~i~~~~-- 261 (379)
.|+++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ . +... ..|..+ ..+..+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999999999999 89999898876543321 1 1111 123333 123333333322
Q ss_pred CCCccEEEEcCCC
Q 017000 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~~~d~vid~~g~ 274 (379)
.+.+|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999884
No 250
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.99 E-value=0.034 Score=54.84 Aligned_cols=78 Identities=31% Similarity=0.402 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh---------------------hhHHHHHhcCCceEeCCCCCCc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~---------------------~~~~~~~~lg~~~v~~~~~~~~ 251 (379)
..+++|+|+|+|+.|+.+++.++..|+ .|+.++..+ ...+.++++|++..++..-. .
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~ 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-R 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-C
Confidence 368999999999999999999999999 788887653 24577788998765543211 1
Q ss_pred hHHHHHHHhcCCCccEEEEcCCCH
Q 017000 252 PIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 252 ~~~~~i~~~~~~~~d~vid~~g~~ 275 (379)
++ .+.+.. .++|.||.++|..
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCC
Confidence 11 111121 2699999999974
No 251
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.036 Score=49.85 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHH----HHHhcCCceE---eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~----~~~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|+|+|+ |.+|..+++.+...|+++|+++++++++.+ .+++.+.... .|..+ ...+.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5689999988 999999999999999944999988766544 2233444321 23332 122333333221 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 252
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.97 E-value=0.04 Score=50.11 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCc------eEeCCCCC--CchHHHHHHHh
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT------EFVNPKDH--DKPIQQVLVDL 260 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~------~v~~~~~~--~~~~~~~i~~~ 260 (379)
.|+++||+|+ .++|.+.+..+...|+ +|+.+++++++.+..++ .+.. .+.|..+. ...+.+...+.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 5789999987 9999999999999999 99999999887654432 2222 12233221 12233334444
Q ss_pred cCCCccEEEEcCCC
Q 017000 261 TDGGVDYSFECIGN 274 (379)
Q Consensus 261 ~~~~~d~vid~~g~ 274 (379)
..++.|++++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 45689999998775
No 253
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.97 E-value=0.026 Score=48.76 Aligned_cols=98 Identities=20% Similarity=0.293 Sum_probs=61.4
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhc-C
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT-D 262 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~-~ 262 (379)
+.....++.+||-+|+|. |..+..+|+. |. +|++++.+++-.+.+++ .+...+ .... .++ .... .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cCh----hhCCcC
Confidence 334455678999998863 7777788774 77 99999999886666553 222211 1100 111 1111 2
Q ss_pred CCccEEEEcCC----C----HHHHHHHHHHhccCCceEEEEc
Q 017000 263 GGVDYSFECIG----N----VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 263 ~~~d~vid~~g----~----~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+.+|+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999987533 1 35677888889997 9966553
No 254
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.044 Score=49.13 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+.+. ++ |..+ .......+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4689999988 9999999998888999 8999888877655432 234322 22 2222 122222233221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 255
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.94 E-value=0.037 Score=49.62 Aligned_cols=79 Identities=29% Similarity=0.387 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+ ..++.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4789999988 9999999998888899 899998887654432 2233222 12 3332 133333333322 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 256
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.93 E-value=0.045 Score=48.47 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCceE---eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v---~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++|||+|+ |.+|..++..+...|+ +|+++.+++++.+.+ ++.+.... .|..+ ...+.+.+.+.. .+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3578999998 9999999999888999 799998887764433 23443322 23322 223333333322 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|.+++++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998865
No 257
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.93 E-value=0.063 Score=47.48 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhh-HHHHHhcCCceE-eCCCCCCchHHHHHHHhcC--CCccEEE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~-~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~~--~~~d~vi 269 (379)
++++||+|+ +++|..+++.+...|+ +|+.++++++. .+.+++.++..+ .|..+ ..+..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999988 9999999998888999 88888876643 344444554221 23222 1233333333322 3699999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 258
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.05 Score=48.78 Aligned_cols=79 Identities=22% Similarity=0.229 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce---EeCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++|||+|+ |.+|..++..+...|+ +|+.+++++++.+.+.+ .+... ..|..+ ...+...+.+.. .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999999989999 89999888776544332 23221 223322 123333333322 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998864
No 259
>PRK06194 hypothetical protein; Provisional
Probab=95.90 E-value=0.042 Score=50.21 Aligned_cols=79 Identities=24% Similarity=0.325 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-h---cCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~---lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |.+|..++..+...|+ +|++++++.++.+.+. + .+... ++ |..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999988 9999999998888999 8999988766544332 2 23322 12 2222 122333232221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 260
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.90 E-value=0.024 Score=47.10 Aligned_cols=78 Identities=21% Similarity=0.224 Sum_probs=49.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCC--hhhHH-H---HHhcCCceE-e--CCCCCCchHHHHHHHhc--CC
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFD-R---AKNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~--~~~~~-~---~~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
++|||+|+ +++|...++.+...|..+|+.+.++ .++.+ + ++..+.... + |..+ .+++...+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 47899988 9999998888888877688888888 34333 2 233453222 2 2221 233444444433 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998886
No 261
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.89 E-value=0.049 Score=48.94 Aligned_cols=78 Identities=26% Similarity=0.289 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh---cCCce---EeCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE---FVNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~---v~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++...+...+ .+.+. ..|..+ ..+..+.+.+.. .+.
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999999989999 89988887543333332 34332 123332 122333333322 237
Q ss_pred ccEEEEcCC
Q 017000 265 VDYSFECIG 273 (379)
Q Consensus 265 ~d~vid~~g 273 (379)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999887
No 262
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.89 E-value=0.1 Score=45.67 Aligned_cols=102 Identities=21% Similarity=0.205 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCceEeC--------CCCCCchHHHHHHHhc-
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVN--------PKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~--------~~~~~~~~~~~i~~~~- 261 (379)
..++.+||+.|+| .|.-++.||. .|. .|++++.++.-.+.+. +.+...... ....-.-....+.++.
T Consensus 32 ~~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 3577899999886 5788888875 699 8999999998777642 233211000 0000000000011111
Q ss_pred --CCCccEEEEcCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017000 262 --DGGVDYSFECIGN--------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 262 --~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+.+|.|+|+..- ...+..+.++|+++ |++++++.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999997531 34688999999997 98777654
No 263
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.88 E-value=0.049 Score=49.38 Aligned_cols=98 Identities=19% Similarity=0.202 Sum_probs=69.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC--
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG-- 273 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g-- 273 (379)
.+|.|+|.|.+|.-++.+|..+|+ +|...+.+.+|+..+..+....+........++.+.+. ++|++|.++=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLIp 242 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLIP 242 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEec
Confidence 466777999999999999999999 99999999999988887554443222221233433332 4888886421
Q ss_pred C---H-HHHHHHHHHhccCCceEEEEccCCC
Q 017000 274 N---V-SVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 274 ~---~-~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
+ | -..++..+.|+++ +.+|++.....
T Consensus 243 gakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred CCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 1 2 2357778999997 99998876443
No 264
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.88 E-value=0.048 Score=48.94 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC-ChhhHHHHHhcCCceE-eCCCCCCchHHHHHHHhc--CCCccEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~~~lg~~~v-~~~~~~~~~~~~~i~~~~--~~~~d~v 268 (379)
.++++||+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999988 9999999999988999 6766644 3444444443343222 23332 123333333322 2379999
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|+++|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 265
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.12 Score=47.52 Aligned_cols=103 Identities=19% Similarity=0.212 Sum_probs=61.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhh-H----HHHHhcCCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-F----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~-~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
-++.++||+|+ |.+|...+..+...|+ +|+.+.+++++ . +.++..+... + .|..+ ...+.+.+.+..
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 35789999988 9999999888888899 78888765422 1 2222334322 2 22222 122323333221
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+++|++|.++|.. .+.+.+...+.+. |++|.++..
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS~ 183 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGSI 183 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 13689999987741 1123344455665 899988764
No 266
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.87 E-value=0.042 Score=56.46 Aligned_cols=75 Identities=29% Similarity=0.355 Sum_probs=55.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh---------------------hHHHHHhcCCceEeCCCCC-Cc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 251 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~-~~ 251 (379)
.+++|+|+|+|+.|+.+++.++..|+ +|++++..+. +.++++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 4567788998766554321 11
Q ss_pred hHHHHHHHhcCCCccEEEEcCCC
Q 017000 252 PIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 252 ~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
.+. ++. .++|.||.++|.
T Consensus 388 ~~~----~l~-~~~DaV~latGa 405 (639)
T PRK12809 388 TFS----DLT-SEYDAVFIGVGT 405 (639)
T ss_pred CHH----HHH-hcCCEEEEeCCC
Confidence 221 121 268999999887
No 267
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.86 E-value=0.027 Score=51.50 Aligned_cols=74 Identities=14% Similarity=0.147 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
..+.+|||+|+|++|.+++..+...|+.+|++++++.++.+.+. .++...-+.. + .+. .+. -..+|+||+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~--~~~----~~~-~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D--LEL----QEE-LADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c--ccc----hhc-cccCCEEEEC
Confidence 45789999999999999999999999669999999988765554 3332100111 0 000 010 1268999999
Q ss_pred CCC
Q 017000 272 IGN 274 (379)
Q Consensus 272 ~g~ 274 (379)
++.
T Consensus 193 Tp~ 195 (278)
T PRK00258 193 TSA 195 (278)
T ss_pred CcC
Confidence 765
No 268
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.84 E-value=0.068 Score=48.91 Aligned_cols=43 Identities=26% Similarity=0.261 Sum_probs=37.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~ 236 (379)
.+++|||+|+|+.|.+++.-+...|+.++++++++.+|.+.+.
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4789999999999999998888899989999999988765554
No 269
>PRK08317 hypothetical protein; Provisional
Probab=95.84 E-value=0.089 Score=46.47 Aligned_cols=101 Identities=26% Similarity=0.358 Sum_probs=68.6
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHhc----CCce-EeCCCCCCchHHHHHHHh
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~l----g~~~-v~~~~~~~~~~~~~i~~~ 260 (379)
.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. +... ++..+. ..+ ..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DGL-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--ccC-----CC
Confidence 4566788999999999975 888889998874 34899999999988877764 1111 111111 000 12
Q ss_pred cCCCccEEEEcC------CCHHHHHHHHHHhccCCceEEEEc
Q 017000 261 TDGGVDYSFECI------GNVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 261 ~~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
..+.+|+|+-.. .....+..+.++|+++ |.++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 234789887531 1245789999999997 9998764
No 270
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.052 Score=49.51 Aligned_cols=79 Identities=24% Similarity=0.296 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+.+. . .|..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999989999 788888877655433 2234322 1 23222 122333332221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 271
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.05 Score=48.69 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++.+.+.+.. .+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999988888899 899998887654332 2334322 2 22222 122222222221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 272
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.034 Score=50.35 Aligned_cols=76 Identities=26% Similarity=0.371 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEEE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~d~vid 270 (379)
+++|+|+|+ |.+|..+++.+...|+ +|+++++++++.+... +... ..|..+ ..++.+.+.... .+.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD-DASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEEE
Confidence 568999988 9999999998888999 8999988776543221 2222 123332 233444444332 237999999
Q ss_pred cCCC
Q 017000 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
++|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9885
No 273
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.073 Score=47.83 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEeCChhh-HHH----HHhcCC-c-eEe--CCCCCCchHHHHHHHh
Q 017000 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FDR----AKNFGV-T-EFV--NPKDHDKPIQQVLVDL 260 (379)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g-~~~vi~v~~~~~~-~~~----~~~lg~-~-~v~--~~~~~~~~~~~~i~~~ 260 (379)
+..+.+|||+|+ |++|..+++-+...| + +|+++++++++ .+. +++.+. + +++ |..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999988 999999888766664 7 88888887764 332 233332 1 222 3322 12333333333
Q ss_pred cC-CCccEEEEcCCC
Q 017000 261 TD-GGVDYSFECIGN 274 (379)
Q Consensus 261 ~~-~~~d~vid~~g~ 274 (379)
.. +++|+++.++|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999887765
No 274
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.039 Score=48.92 Aligned_cols=80 Identities=25% Similarity=0.345 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce----EeCCCCC-C---chHHHHHHHh
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE----FVNPKDH-D---KPIQQVLVDL 260 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~----v~~~~~~-~---~~~~~~i~~~ 260 (379)
++++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+... ..|..+. . ..+.+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4689999988 9999999988888999 8999999887654432 222111 1222110 1 1233334443
Q ss_pred cCCCccEEEEcCCC
Q 017000 261 TDGGVDYSFECIGN 274 (379)
Q Consensus 261 ~~~~~d~vid~~g~ 274 (379)
..+.+|++|+++|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999998884
No 275
>PRK04457 spermidine synthase; Provisional
Probab=95.81 E-value=0.11 Score=46.99 Aligned_cols=97 Identities=13% Similarity=0.133 Sum_probs=65.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc-CCc---eEeCCCCCCchHHHHHHHhcCCCccEE
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT---EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~---~v~~~~~~~~~~~~~i~~~~~~~~d~v 268 (379)
.+.++||++|.|+ |.++..+++.....++++++.+++-.+.+++. +.. .-+... ..+..+.+.+. .+.+|+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~--~~Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI--EADGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE--ECCHHHHHHhC-CCCCCEE
Confidence 3567899999863 77888888877545899999999999988864 221 101011 12344444433 3479987
Q ss_pred E-EcCC---------CHHHHHHHHHHhccCCceEEE
Q 017000 269 F-ECIG---------NVSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 269 i-d~~g---------~~~~~~~~~~~l~~~~G~iv~ 294 (379)
+ |... ..+++..+.+.|+++ |.++.
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 7 4322 147789999999997 99886
No 276
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.076 Score=47.73 Aligned_cols=77 Identities=25% Similarity=0.263 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cC-Cc-eE--eCCCCCCchHHHHHHHh---cCCCcc
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FG-VT-EF--VNPKDHDKPIQQVLVDL---TDGGVD 266 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg-~~-~v--~~~~~~~~~~~~~i~~~---~~~~~d 266 (379)
+++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ ++ .. ++ .|..+ ..++.+.+... ..+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 57999988 9999999998888999 89999888887655533 32 11 12 23333 12333333332 134799
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999875
No 277
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.80 E-value=0.067 Score=48.64 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=49.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEeCChhhHH----HHHhcCCceEe--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~~----~~~~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+ +.+++|....+ |..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 57899999984 899999999999999 8888877653222 22334543322 3332 122333333322 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+.+|++++++|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999998873
No 278
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.78 E-value=0.058 Score=48.50 Aligned_cols=79 Identities=25% Similarity=0.404 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhcC--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 263 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. +.+... . .|..+ ...+...+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999999998888999 8999988877655443 223221 1 23332 1233332332211 3
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 279
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.071 Score=47.31 Aligned_cols=79 Identities=16% Similarity=0.137 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. +.+... ++ |..+ ...+...+.+.. .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999987 9999999999988999 8999999877654432 222222 22 2222 123333333322 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 280
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.072 Score=47.06 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+ ++.+.+. .+ |..+ .++..+.+.+.. .+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999988 9999998888888999 899998888765433 2334332 12 2222 123332333221 23
Q ss_pred -CccEEEEcCC
Q 017000 264 -GVDYSFECIG 273 (379)
Q Consensus 264 -~~d~vid~~g 273 (379)
.+|++|+++|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999986
No 281
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.76 E-value=0.056 Score=48.54 Aligned_cols=79 Identities=20% Similarity=0.258 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCceE-e--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+.... + |..+ ...+.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999998 9999999999999999 788888887654332 33444322 1 2222 122222222211 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998875
No 282
>PRK08589 short chain dehydrogenase; Validated
Probab=95.76 E-value=0.053 Score=49.27 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
+++++||+|+ +++|...++.+...|+ +|++++++++..+.+.+ .+... . .|..+ ..+....+.+.. .+.
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4789999988 9999999988888999 89998887433333332 23221 1 23332 123333333322 236
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998764
No 283
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.76 E-value=0.045 Score=49.17 Aligned_cols=78 Identities=19% Similarity=0.308 Sum_probs=49.4
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce--E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
.|+++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... . .|..+ ..+..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 57899999874 899999998888999 8888877754444444442211 1 23322 122333333322 247
Q ss_pred ccEEEEcCC
Q 017000 265 VDYSFECIG 273 (379)
Q Consensus 265 ~d~vid~~g 273 (379)
+|++++++|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999877
No 284
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.75 E-value=0.049 Score=48.84 Aligned_cols=79 Identities=19% Similarity=0.321 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh--hHHHHHhcCCce---EeCCCCCCchHHHHHHHhc--CCCc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
+|+++||+|+ +++|.++++.+...|+ +|+.+++++. ..+.+++.+.+. ..|..+ ..+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4789999988 9999999999999999 8888766542 123334445432 123333 123333333321 2479
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998874
No 285
>PLN02476 O-methyltransferase
Probab=95.75 E-value=0.094 Score=47.61 Aligned_cols=104 Identities=17% Similarity=0.179 Sum_probs=68.7
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHH----hcCCceEeCCCCCCchHHHHHHHhc-
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~----~lg~~~v~~~~~~~~~~~~~i~~~~- 261 (379)
...+..+.++||=+|.+ +|..++++|+.++. .+|+.++.+++..+.++ +.|..+-+.... .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHh
Confidence 34456678999999874 57788888888752 37999999998877775 356543222211 23444444431
Q ss_pred ---CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 017000 262 ---DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ---~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.||.||--... ...++.++.+++++ |.++.=
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 2379998843333 45688899999996 887743
No 286
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.06 Score=48.91 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=50.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc-CCce-E--eCCCCCCchHHHHHHHhc--CCCccEE
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~-v--~~~~~~~~~~~~~i~~~~--~~~~d~v 268 (379)
++|||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+++. +... + .|..+ ...+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999988 9999999988888899 899998988776655432 2221 1 22222 122333333321 2378999
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|+++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998874
No 287
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.072 Score=47.71 Aligned_cols=73 Identities=21% Similarity=0.305 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh-hhHHHHHhcCCceE--eCCCCCCchHHHHHHHhcCCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~~~~~~lg~~~v--~~~~~~~~~~~~~i~~~~~~~~d~vi 269 (379)
.++++||+|+ |++|..+++.+...|+ +|+++++++ ++.+...+ +.... .|..+ .+ .+.+.. +.+|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~~---~~~~~~-~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--EE---SLDKQL-ASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--HH---HHHHhc-CCCCEEE
Confidence 3689999988 9999999999999999 888887765 32222111 11122 23222 11 222222 3699999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
No 288
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.07 Score=49.65 Aligned_cols=79 Identities=20% Similarity=0.172 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hc-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.|++++|+|+ +++|..++..+...|+ +|+.+.+++++.+.+. ++ +... + .|..+ ..+..+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4689999988 9999999998888999 8888888877654332 11 1111 1 23332 122222222221
Q ss_pred CCCccEEEEcCCC
Q 017000 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~~~d~vid~~g~ 274 (379)
.+.+|++|+++|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2379999998774
No 289
>PRK08643 acetoin reductase; Validated
Probab=95.70 E-value=0.059 Score=48.29 Aligned_cols=78 Identities=17% Similarity=0.221 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 578999988 9999999999989999 8999988876654332 223222 1 22222 123333333322 247
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 290
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.70 E-value=0.081 Score=47.20 Aligned_cols=35 Identities=34% Similarity=0.477 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..+++.+..+|..+++.+|.+
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35789999999999999999999999899988764
No 291
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.054 Score=48.30 Aligned_cols=79 Identities=22% Similarity=0.235 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hc--CCc-eEe--CCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~l--g~~-~v~--~~~~~~~~~~~~i~~~~--~~~ 264 (379)
++.++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+... ++ +.. .++ |..+ .....+.+.... .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4679999988 9999999988888899 8999988876544332 22 222 122 2222 122222232221 137
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+++.++|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 292
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.69 E-value=0.16 Score=45.07 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=71.7
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc----e--EeCCCCCCchHHHHHHHhc
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----E--FVNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~----~--v~~~~~~~~~~~~~i~~~~ 261 (379)
...+..+|++||=+|+| .|-.|..+++..|-.+|+++|.++.-++.+++--.+ . .+..+. ++ + .+.
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dA--e~----L-Pf~ 116 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDA--EN----L-PFP 116 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEech--hh----C-CCC
Confidence 34455689999988765 689999999999866999999999988877753222 1 111111 11 1 122
Q ss_pred CCCccEEEEcCCC------HHHHHHHHHHhccCCceEEEEccC
Q 017000 262 DGGVDYSFECIGN------VSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+..||+|.-+.|- ...++++.+.|+|+ |+++.+...
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~ 158 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFS 158 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcC
Confidence 3378988876553 46799999999997 999888654
No 293
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.064 Score=48.22 Aligned_cols=79 Identities=23% Similarity=0.286 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hc-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ +... + .|..+ ..++...+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 8998888877654332 22 2211 1 23322 123333333321
Q ss_pred CCCccEEEEcCCC
Q 017000 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~~~d~vid~~g~ 274 (379)
.+.+|++|+++|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999998874
No 294
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.088 Score=46.30 Aligned_cols=74 Identities=19% Similarity=0.233 Sum_probs=49.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCceE-eCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~v-~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..++.+.+... .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence 5899988 9999999999988999 899898888776544 34444322 23333 12233333332 236899998765
No 295
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.064 Score=48.03 Aligned_cols=78 Identities=21% Similarity=0.263 Sum_probs=50.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~ 264 (379)
|+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+... .+ |..+ ..++.+.+.+.. .++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 578999988 9999999999999999 89999888776544332 23222 22 3222 123333333322 236
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 296
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.67 E-value=0.047 Score=52.11 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhH-HHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~-~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
-.+.+|||+|+|-+|..++.-+...|..+|+++.++.+|. ++++++|+. ++..++ ..+.+ ..+|+||-+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e----l~~~l-----~~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE----LLEAL-----AEADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH----HHHhh-----hhCCEEEEe
Confidence 4789999999999999999999999988999999988875 567788853 332221 22222 158999999
Q ss_pred CCCHHHH---HHHHHHhccCCc-eEEEEccC
Q 017000 272 IGNVSVM---RAALECCHKGWG-TSVIVGVA 298 (379)
Q Consensus 272 ~g~~~~~---~~~~~~l~~~~G-~iv~~g~~ 298 (379)
++.+..+ ......++.... -+++++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 8875321 222233333213 45666664
No 297
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.67 E-value=0.086 Score=48.14 Aligned_cols=130 Identities=25% Similarity=0.339 Sum_probs=73.6
Q ss_pred CcceEecCCCCCccccccccccchhhcchhhhc-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH
Q 017000 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (379)
Q Consensus 157 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~ 235 (379)
...+++|.+.+-+- .....+|++. |... ...++|.+||=+|+| .|.+++- |..+|+.+|++++.++-..+.+
T Consensus 129 ~~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~DiDp~AV~aa 201 (300)
T COG2264 129 DELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVDIDPQAVEAA 201 (300)
T ss_pred CceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEecCCHHHHHHH
Confidence 45667776665432 2233334332 2111 135699999999884 3554443 4456887999999988665555
Q ss_pred Hh----cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEEccCC
Q 017000 236 KN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 236 ~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
++ -+........ .........++.+|+|+-.+=. ..+.+++...++++ |++++-|...
T Consensus 202 ~eNa~~N~v~~~~~~~-----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 202 RENARLNGVELLVQAK-----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred HHHHHHcCCchhhhcc-----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 43 3333100000 0000111222479998843211 24567788889997 9999998754
No 298
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.66 E-value=0.085 Score=47.50 Aligned_cols=102 Identities=18% Similarity=0.282 Sum_probs=62.4
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEeCChhhH----HHHHhcCCceEe--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~----~~~~~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++.. ++.++++....+ |..+ .++..+.+.... .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 47899999873 899999998888999 788887775432 222334432332 2222 122333333222 2
Q ss_pred CCccEEEEcCCCH--------------H---------------HHHHHHHHhccCCceEEEEccC
Q 017000 263 GGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 263 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+.+|++++++|.. + ..+.++..++.+ |+++.++..
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~ 150 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYY 150 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEecc
Confidence 4799999987631 1 134556667775 898887654
No 299
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.19 Score=44.56 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=60.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh-hhH----HHHHhcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~----~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
++.++||+|+ |.+|..++..+...|+ +++.+.++. ++. +.+++.+... .+ |..+ ..+..+.+.+.. .
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4689999988 9999999999999999 666665433 222 2223334322 22 2222 122223333221 2
Q ss_pred CCccEEEEcCCCH-------------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 263 GGVDYSFECIGNV-------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 263 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+++|++|.++|.. ..++.++..++.. |+++.++..
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 4799999988741 1133445556675 899988754
No 300
>PRK09242 tropinone reductase; Provisional
Probab=95.66 E-value=0.067 Score=48.01 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-c-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.|+++||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ + +.+. . .|..+ ..+..+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4789999988 9999999999999999 89998888776543321 1 2222 1 23222 122333333221
Q ss_pred CCCccEEEEcCCC
Q 017000 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~~~d~vid~~g~ 274 (379)
.+++|+++.++|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999874
No 301
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.051 Score=48.63 Aligned_cols=75 Identities=24% Similarity=0.334 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc-eE--eCCCCCCchHHHHHHHhc--CCCccE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~~~~d~ 267 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++ ...+.. .+ .|..+ ..++.+.+.... .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4789999988 9999999999988999 89988887654 112221 11 23322 122333333321 236899
Q ss_pred EEEcCCC
Q 017000 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|+++|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9998873
No 302
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.067 Score=47.82 Aligned_cols=78 Identities=21% Similarity=0.248 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCc-eEe--CCCCCCchHHHHHHHhcC--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFV--NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~-~v~--~~~~~~~~~~~~i~~~~~--~ 263 (379)
++.+|||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+.. +.+ |..+ ..+..+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999988 9999999999999999 89999888765543322 2322 122 3322 1223233333221 3
Q ss_pred CccEEEEcCC
Q 017000 264 GVDYSFECIG 273 (379)
Q Consensus 264 ~~d~vid~~g 273 (379)
.+|++++++|
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 303
>PRK07985 oxidoreductase; Provisional
Probab=95.63 E-value=0.15 Score=46.94 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=61.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh--hhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~--~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+.++. ++.+.+ ++.+... . .|..+ ..+....+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5689999988 9999999999999999 788775432 222222 2334322 1 23322 123333333322
Q ss_pred CCCccEEEEcCCCH--------------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 262 DGGVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+++|+++++.|.. .+++.++..+..+ |++|.++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 23789999887631 1234455556675 899988754
No 304
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.62 E-value=0.096 Score=46.54 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=67.3
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhc-
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~- 261 (379)
...+..+.++||=+|.| .|..++.+++.++ ..+|++++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHh
Confidence 34456678899999874 5777777887764 4599999999988777764 44432121111 23334444432
Q ss_pred ---CCCccEEEEcCC---CHHHHHHHHHHhccCCceEEEE
Q 017000 262 ---DGGVDYSFECIG---NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 262 ---~~~~d~vid~~g---~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.+.||+||--.. -...+..++++++++ |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999884322 245688889999996 887754
No 305
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.076 Score=48.34 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCC--c-eEe--CCCCCCchHHHHHHHhc--C
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV--T-EFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~--~-~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+. . +++ |..+ .+++.. +.+.. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 578999988 9999999998888999 89998888766543322 221 1 122 3332 233333 33332 1
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|+++.++|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 378999998874
No 306
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.59 E-value=0.074 Score=49.65 Aligned_cols=78 Identities=21% Similarity=0.217 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcC---Cc-eE--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VT-EF--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg---~~-~v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ .++. .. .+ .|..+ .....+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4688999988 9999999998888898 899998887765433 2332 11 11 23332 122222232221 23
Q ss_pred CccEEEEcCC
Q 017000 264 GVDYSFECIG 273 (379)
Q Consensus 264 ~~d~vid~~g 273 (379)
.+|++|+++|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 307
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.18 Score=45.88 Aligned_cols=100 Identities=21% Similarity=0.321 Sum_probs=60.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc-CCCcc
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT-DGGVD 266 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~-~~~~d 266 (379)
++++||+|+|++|..++..+. .|+ +|+.+++++++.+.+ ++.+.+. + .|..+ ...+...+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 467888999999999888874 788 899998887665432 2234322 2 23333 123333333321 24799
Q ss_pred EEEEcCCCH------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 267 YSFECIGNV------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 267 ~vid~~g~~------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++|+++|.. .+++.+...+.++ |+++.++..
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS~ 127 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIASQ 127 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEec
Confidence 999998741 1134444556665 777776543
No 308
>PLN02253 xanthoxin dehydrogenase
Probab=95.59 E-value=0.063 Score=48.88 Aligned_cols=79 Identities=16% Similarity=0.187 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHH-HHhcCC--c-eE--eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~--~-~v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
.++++||+|+ |.+|..+++.+...|+ +|+++++++++.+. ..+++. . +. .|..+ .....+.+.... .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 3689999988 9999999988888899 89888887655433 233321 1 11 23332 122333233222 147
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|+++|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998864
No 309
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.58 E-value=0.076 Score=47.42 Aligned_cols=76 Identities=20% Similarity=0.343 Sum_probs=50.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceE---eCCCCCCchHHHHHHHhcC--CCccEEE
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEF---VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v---~~~~~~~~~~~~~i~~~~~--~~~d~vi 269 (379)
+|||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ ++.+.. .|..+ ...+.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899988 9999999999988999 89999998877655443 343221 22222 1233333333221 3799999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
.++|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98764
No 310
>PRK05717 oxidoreductase; Validated
Probab=95.58 E-value=0.074 Score=47.68 Aligned_cols=79 Identities=23% Similarity=0.332 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHH-HHhcCCce-E--eCCCCCCchHHHHHHHhcC--CCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~~d 266 (379)
.|++|||+|+ |.+|..++..+...|+ +|+.+++++++.+. .++++... . .|..+ ..+..+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4789999988 9999999998888899 88888877665443 33444322 1 22222 1223222333222 3689
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 311
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.073 Score=47.92 Aligned_cols=78 Identities=19% Similarity=0.323 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhcC--CC
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~ 264 (379)
+.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+... + .|..+ ...+...+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 357999988 9999999999989999 899998887654432 2233322 1 12222 1233333333221 36
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+||+++|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 312
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.08 Score=49.02 Aligned_cols=79 Identities=19% Similarity=0.198 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-Hhc-----CCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l-----g~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.+++|||+|+ |++|..+++.+...|+ +|+.+.++.++.+.+ +++ +... + .|..+ ..+..+.+.+..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5789999988 9999999998888899 888888887664432 111 1111 2 23222 122333333322
Q ss_pred CCCccEEEEcCCC
Q 017000 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~~~d~vid~~g~ 274 (379)
.+++|++|+++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2369999998873
No 313
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.15 Score=45.89 Aligned_cols=103 Identities=19% Similarity=0.302 Sum_probs=61.4
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCCh---hhHHHH-Hhc-CCc-eE--eCCCCCCchHHHHHHHhc-
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVT-EF--VNPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~---~~~~~~-~~l-g~~-~v--~~~~~~~~~~~~~i~~~~- 261 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ .++ +.. .. .|..+ ..+....+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4789999987 4999999998888999 788876543 333322 333 221 11 23333 133333333332
Q ss_pred -CCCccEEEEcCCCH--------------H---------------HHHHHHHHhccCCceEEEEccCC
Q 017000 262 -DGGVDYSFECIGNV--------------S---------------VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 262 -~~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.+.+|++++++|.. + ..+.++..+.++ |+|+.++...
T Consensus 84 ~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~~ 150 (257)
T PRK08594 84 EVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLG 150 (257)
T ss_pred hCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEcccC
Confidence 24799999987621 0 123445556775 9999887643
No 314
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.54 E-value=0.082 Score=48.10 Aligned_cols=92 Identities=18% Similarity=0.120 Sum_probs=57.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcC---CceEeCCCCCCchHHHHHHHhcCCCccE
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG---VTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg---~~~v~~~~~~~~~~~~~i~~~~~~~~d~ 267 (379)
...+++++|+|+|++|.+++..+...|+ +|+++++++++.+.+ +.+. ....+... +.....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----------~~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD-----------ELPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh-----------hhcccCccE
Confidence 3457899999999999999988888898 899998887765433 3332 11111111 111126899
Q ss_pred EEEcCCCHH--HH---HHHHHHhccCCceEEEEc
Q 017000 268 SFECIGNVS--VM---RAALECCHKGWGTSVIVG 296 (379)
Q Consensus 268 vid~~g~~~--~~---~~~~~~l~~~~G~iv~~g 296 (379)
||+|++... .. ......++++ ..++.+.
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~ 214 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV 214 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence 999987631 01 1123446664 5666553
No 315
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.53 E-value=0.26 Score=41.05 Aligned_cols=88 Identities=20% Similarity=0.263 Sum_probs=56.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCH
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 275 (379)
.+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+..+ + +..+.+.+ .|+||-|..+.
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~------s~~e~~~~-----~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D------SPAEAAEQ-----ADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S------SHHHHHHH-----BSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h------hhhhHhhc-----ccceEeecccc
Confidence 368889999999999998889999 89999999999988888775322 1 12222222 57888777775
Q ss_pred HHHHHHHH------HhccCCceEEEEcc
Q 017000 276 SVMRAALE------CCHKGWGTSVIVGV 297 (379)
Q Consensus 276 ~~~~~~~~------~l~~~~G~iv~~g~ 297 (379)
......+. .+.++ ..++.++.
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 54544333 34443 45555544
No 316
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.53 E-value=0.055 Score=48.92 Aligned_cols=80 Identities=21% Similarity=0.290 Sum_probs=52.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh----hHHHHHhcCCc--eEeCCCCCCchHHHHHHHhcC--C
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNFGVT--EFVNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~----~~~~~~~lg~~--~v~~~~~~~~~~~~~i~~~~~--~ 263 (379)
-.|+.|||+|+ +++|.+.++=...+|+ +++..+.+.+ ..+.+++.|-. .+.|-++ .++......+... |
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 36899999988 9999998888888898 7888776654 34445555511 1333333 2444443333332 3
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998774
No 317
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.53 E-value=0.14 Score=44.93 Aligned_cols=101 Identities=17% Similarity=0.148 Sum_probs=61.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCceE---------eCCCCCCchHHHHHHHh
Q 017000 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF---------VNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 191 ~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v---------~~~~~~~~~~~~~i~~~ 260 (379)
.+.++.+||+.|+| .|.-++.||. .|+ .|++++.++.-.+.+. +.+.... ....+. .-+...+.++
T Consensus 34 ~~~~~~rvL~~gCG-~G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v-~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLCG-KSLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEI-TIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeCCC-ChHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCce-EEEECcccCC
Confidence 45678899999886 5777777775 799 8999999998777652 3332110 000000 0000001111
Q ss_pred ---cCCCccEEEEcCC--------CHHHHHHHHHHhccCCceEEEEc
Q 017000 261 ---TDGGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 261 ---~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
..+.||.|+|... ....+..+.++|+++ |++.++.
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~ 155 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT 155 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 1136899999653 135588999999997 9865543
No 318
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.53 E-value=0.21 Score=45.16 Aligned_cols=102 Identities=22% Similarity=0.311 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-------------------h----HHHHHhcCCce-EeCCCCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTE-FVNPKDH 249 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-------------------~----~~~~~~lg~~~-v~~~~~~ 249 (379)
.+.+|+|+|+|++|..++..+-..|..+++.++.+.- | .+.+++++.+. +....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4688999999999999999999999889999875421 1 11222333221 1111110
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
- ..+.+.++....+|+||||..+...-..+...+....=.++..|.
T Consensus 109 -i-~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 -I-TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred -c-ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 0 011222333336999999999855444455555553134555544
No 319
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.52 E-value=0.029 Score=48.64 Aligned_cols=101 Identities=21% Similarity=0.308 Sum_probs=65.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhc----C
Q 017000 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT----D 262 (379)
Q Consensus 192 ~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~----~ 262 (379)
...-++||-+|.+ +|+.++++|+.+.- .+|+.++.++++.+.+++ .|...-+.... .+..+.+.++. .
T Consensus 43 ~~~~k~vLEIGt~-~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~~~ 119 (205)
T PF01596_consen 43 LTRPKRVLEIGTF-TGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDGEE 119 (205)
T ss_dssp HHT-SEEEEESTT-TSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTTTT
T ss_pred hcCCceEEEeccc-cccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhccCC
Confidence 3455899999985 68899999998742 399999999998887754 45433222211 23444444432 2
Q ss_pred CCccEEE-EcCCC--HHHHHHHHHHhccCCceEEEEc
Q 017000 263 GGVDYSF-ECIGN--VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 263 ~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+.||.|| |+.-. ...+..++.+++++ |.++.=.
T Consensus 120 ~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 120 GQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699988 54322 34578888999996 7776543
No 320
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.079 Score=47.49 Aligned_cols=79 Identities=18% Similarity=0.268 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh-h-HHH---HHhcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDR---AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~-~~~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.++++||+|+ +++|..+++.+...|+ +|+.++++++ . .+. +++.+... .+ |..+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4789999988 9999999999999999 8888877543 2 222 22334322 22 2222 123333333322 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 478999999874
No 321
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.51 E-value=0.12 Score=46.37 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45899999999999999999999999889888754
No 322
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.51 E-value=0.072 Score=47.38 Aligned_cols=79 Identities=23% Similarity=0.270 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHH----HHhcCCce-Ee--CCCCCCchHHHHHHHhcC--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~----~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~ 263 (379)
.+.+|||+|+ |.+|..++..+...|+ +|++++++.++... +++.+... ++ |..+ ...+.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999988888899 89999888654332 23333222 22 2222 1233333333221 3
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|+||.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998755
No 323
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.064 Score=47.30 Aligned_cols=74 Identities=23% Similarity=0.250 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhcCC-CccEEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~-~~d~vid 270 (379)
.+++|||+|+ |.+|..+++.+...|+ +|+++.++.++ .+.... ..|..+ ...+.+.+.+.... +.|++|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence 3678999988 9999999999989998 89999887654 111111 123332 12333334443333 6899999
Q ss_pred cCCC
Q 017000 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
++|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 324
>PRK06398 aldose dehydrogenase; Validated
Probab=95.51 E-value=0.046 Score=49.25 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~d~vi 269 (379)
.|+++||+|+ +++|...+..+...|+ +|+.+++++++.. .... ..|..+ ..+..+.+.+.. .+.+|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 9999999999999999 8998887765422 1111 123332 123333333322 23699999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 325
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.15 Score=44.65 Aligned_cols=75 Identities=15% Similarity=0.168 Sum_probs=46.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-cCCceEe--CCCCCCchHHHHHHHhcCCCccEEEE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-lg~~~v~--~~~~~~~~~~~~i~~~~~~~~d~vid 270 (379)
..++||+|+ |.+|..++..+... + +|++++++.++.+.+.+ ....+++ |..+ ...+.+.+... ++.|.+|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi~ 77 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD-PEAIAAAVEQL--GRLDVLVH 77 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC-HHHHHHHHHhc--CCCCEEEE
Confidence 368999988 99999888777666 6 89999888776554442 2112233 2222 12222222221 26999999
Q ss_pred cCCC
Q 017000 271 CIGN 274 (379)
Q Consensus 271 ~~g~ 274 (379)
++|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9875
No 326
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.51 E-value=0.11 Score=45.49 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45789999999999999999999999889999876
No 327
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.50 E-value=0.093 Score=49.32 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
.+.+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 457899999999999999999999998899898753
No 328
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.50 E-value=0.087 Score=49.55 Aligned_cols=35 Identities=34% Similarity=0.401 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999999899999875
No 329
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.079 Score=47.67 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
++.++||+|+ |.+|..++..+...|+ +|+.++++++..+.+.+ .+... . .|..+ ..+....+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999999988999 79999887754433332 23221 1 23322 122222233221 237
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998883
No 330
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.089 Score=47.17 Aligned_cols=78 Identities=27% Similarity=0.351 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCc--eE--eCCCCCCchHHHHHHHhc--CCCcc
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--EF--VNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~--~v--~~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++... ++ .|..+ ...+...+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 568999988 9999998888888898 8999988877655433 23211 12 22222 122223333321 13689
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 331
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.091 Score=46.80 Aligned_cols=77 Identities=17% Similarity=0.291 Sum_probs=49.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----c--CCc-eE--eCCCCCCchHHHHHHHhc--C
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVT-EF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----l--g~~-~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+.+ . +.. ++ .|..+ ...+.+.+.+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 568999988 9999998888888898 89888888876554322 1 211 12 23333 123333333322 2
Q ss_pred CCccEEEEcCC
Q 017000 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~~~d~vid~~g 273 (379)
+++|++|+++|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999886
No 332
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.49 E-value=0.089 Score=48.37 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
.++++||+|+|++|.+++..+...|+++|+++++++
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999999999999888899997799998885
No 333
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.084 Score=47.93 Aligned_cols=78 Identities=24% Similarity=0.369 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-Hhc---C--Cc-eEe--CCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G--VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~l---g--~~-~v~--~~~~~~~~~~~~i~~~~-- 261 (379)
+++++||+|+ |.+|..+++.+...|+ +|+.+.+++++.+.. .++ + .. .++ |..+ ..++...+.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4689999998 9999999999999999 899998877654322 222 1 11 122 3222 123333333322
Q ss_pred CCCccEEEEcCC
Q 017000 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~~~d~vid~~g 273 (379)
.+++|++|+++|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 137899999887
No 334
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.49 E-value=0.07 Score=47.98 Aligned_cols=77 Identities=21% Similarity=0.290 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-----cCCce-Ee--CCCCCCchHHHHHHHhcCCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTE-FV--NPKDHDKPIQQVLVDLTDGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~-v~--~~~~~~~~~~~~i~~~~~~~ 264 (379)
.++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ .+... .+ |..+ ..++.+.+... +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CC
Confidence 4789999988 9999999998888999 89999888776544321 23221 22 2222 12333333322 47
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 335
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.48 E-value=0.17 Score=45.52 Aligned_cols=99 Identities=19% Similarity=0.222 Sum_probs=65.9
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhcCCCc
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~ 265 (379)
.....+.++++||=+|+| .|..+..+++..+..+|++++.++.-.+.+++..... ++.. +.... .....+
T Consensus 24 l~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-----d~~~~---~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-----DIASW---QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-----chhcc---CCCCCc
Confidence 344556788999999885 4666778887765449999999999888887643221 2211 11110 112379
Q ss_pred cEEEEcCC------CHHHHHHHHHHhccCCceEEEE
Q 017000 266 DYSFECIG------NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 266 d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+|+-... ....+..+.+.|+++ |+++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 99885433 135688899999997 998875
No 336
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.48 E-value=0.069 Score=47.77 Aligned_cols=79 Identities=24% Similarity=0.303 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+... . .|..+ .....+.+.+.. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4679999988 9999999998888899 8999988877654332 223321 1 22222 123333333221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.+++.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 337
>PRK08264 short chain dehydrogenase; Validated
Probab=95.46 E-value=0.063 Score=47.49 Aligned_cols=75 Identities=23% Similarity=0.276 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-Ee--CCCCCCchHHHHHHHhcCCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~~~~d~vi 269 (379)
.+.+|||+|+ |.+|..+++.+...|+++|++++++.++.+. .+... ++ |..+ ...+.+.+... +.+|+||
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~~--~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEAA--SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 4678999987 9999999999999998678888888766543 22221 22 2222 12232223221 2589999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
.++|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 338
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.45 E-value=0.084 Score=47.32 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh--hHHHHHhcCCce-Ee--CCCCCCchHHHHHHHhc--CCCc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
.|+++||+|+ |++|.++++.+...|+ +|+.+++.+. ..+.+++++... .+ |..+ ..+..+.+.+.. .+.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 4789999988 9999999999999999 8888765432 223334444322 12 2222 123333333322 2379
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++++++|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 339
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.45 E-value=0.088 Score=47.34 Aligned_cols=76 Identities=24% Similarity=0.301 Sum_probs=49.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCceEe--CCCCCCchHHHHHHHhc--CCCccE
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--~~~~d~ 267 (379)
++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +.+..+.+ |..+ .++..+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899988 9999999999988999 8999988877654332 22322222 2222 123333333322 247999
Q ss_pred EEEcCCC
Q 017000 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|+++|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 340
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.45 E-value=0.065 Score=43.13 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=29.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
..+|+|.|+|++|..++..+-..|..+++.+|..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999899999854
No 341
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.44 E-value=0.14 Score=41.61 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
+|+|+|+|++|...+..+...|.++++.++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999889999754
No 342
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.44 E-value=0.1 Score=50.20 Aligned_cols=90 Identities=29% Similarity=0.382 Sum_probs=54.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHh--cCCce---EeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 198 VAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN--FGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 198 VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~--lg~~~---v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+... .+|..+ .. .+.++.. +.|+||+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~~-~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----PE-SLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----HH-HHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----HH-HHHHHHh-cCCEEEEC
Confidence 7889999999999999887764 389999999999776653 22211 233332 21 2344333 46999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEE
Q 017000 272 IGNVSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~ 294 (379)
+|.......+-.|+..+ -.++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 99854444444455553 55555
No 343
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.44 E-value=0.14 Score=46.34 Aligned_cols=131 Identities=18% Similarity=0.164 Sum_probs=86.1
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC---------CchHHHHHHH
Q 017000 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---------DKPIQQVLVD 259 (379)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~---------~~~~~~~i~~ 259 (379)
.+..-++.+||+.|+|..|+.++-.++..|+ .|...+-...+.+..+++|++.+-..++. +.+|...-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3445677889999999999999999999999 88888888888888888887643222111 3344443333
Q ss_pred hcC---CCccEEEEcCCC-----HH-HHHHHHHHhccCCceEEEEccCCC-CcccccCcceeee-ccEEEeee
Q 017000 260 LTD---GGVDYSFECIGN-----VS-VMRAALECCHKGWGTSVIVGVAAS-GQEISTRPFQLVT-GRVWKGTA 321 (379)
Q Consensus 260 ~~~---~~~d~vid~~g~-----~~-~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~~~-~~~i~~~~ 321 (379)
+.. .++|+||-+.=- |. ........++++ +.+|.+....+ +..+.-+-.-... +.+|.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 279999976422 22 346778889997 99999875433 2232222222222 77777764
No 344
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.44 E-value=0.09 Score=47.16 Aligned_cols=79 Identities=29% Similarity=0.409 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCce-Ee--CCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
.++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++... .+ |..+ ..+....+.+.. .+.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3678999988 9999999999988999 8999988887665443 333221 12 2222 123333333321 23699
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++++++|.
T Consensus 83 ~li~~ag~ 90 (257)
T PRK07067 83 ILFNNAAL 90 (257)
T ss_pred EEEECCCc
Confidence 99998763
No 345
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.41 E-value=0.14 Score=44.01 Aligned_cols=76 Identities=26% Similarity=0.307 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh-c----CCceE-eCCCCCCchHHHHHHHhcCCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GVTEF-VNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~-l----g~~~v-~~~~~~~~~~~~~i~~~~~~~~d 266 (379)
++.+++|+|+ |.+|..++..+...|+ +|+.++++.++.+.+.+ + +.... .+..+ ..++.+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcCC
Confidence 5789999987 9999998888888898 89998888877654432 2 22211 11211 12222222 2589
Q ss_pred EEEEcCCCHH
Q 017000 267 YSFECIGNVS 276 (379)
Q Consensus 267 ~vid~~g~~~ 276 (379)
+||.+++.+.
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999877644
No 346
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.39 E-value=0.094 Score=47.30 Aligned_cols=78 Identities=19% Similarity=0.263 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCceE--eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g--~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ .+.|.... .|..+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 4 799999888888999 788877764222222 23343332 23333 123333333322 2
Q ss_pred CCccEEEEcCC
Q 017000 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~~~d~vid~~g 273 (379)
+.+|++++++|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 47999999876
No 347
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.38 E-value=0.099 Score=46.84 Aligned_cols=79 Identities=19% Similarity=0.349 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ ..++...+.+.. .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5889999988 9999999988888899 899998887654432 2334322 2 23322 123333333322 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|.++|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 348
>PRK01581 speE spermidine synthase; Validated
Probab=95.38 E-value=0.25 Score=46.50 Aligned_cols=102 Identities=17% Similarity=0.068 Sum_probs=65.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC-ce----EeCCCCC---CchHHHHHHHhcCCC
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE----FVNPKDH---DKPIQQVLVDLTDGG 264 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~-~~----v~~~~~~---~~~~~~~i~~~~~~~ 264 (379)
...++|||+|+| .|.++..+++.-+..+|++++.+++-.+.++++.. .. .++.... -.+..+.+.+ ..+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 344799999875 56677777877666699999999999999986310 00 0000000 1233444443 3347
Q ss_pred ccEEEEcCCC-----------HHHHHHHHHHhccCCceEEEEcc
Q 017000 265 VDYSFECIGN-----------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 265 ~d~vid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+|+||--... .+++..+.+.|+++ |.++....
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 9998733221 34688899999997 99887643
No 349
>PRK06720 hypothetical protein; Provisional
Probab=95.38 E-value=0.12 Score=43.44 Aligned_cols=79 Identities=27% Similarity=0.281 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHh--cCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDL--TDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~--~~~ 263 (379)
.+.+++|+|+ +++|...+..+...|+ +|+.++++++..+.. ++.+... ++ |..+ ..++.+.+.+. ..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 8999999888888898 899998876654322 2234332 22 2221 12222222221 124
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68999888764
No 350
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.36 E-value=0.037 Score=49.34 Aligned_cols=106 Identities=19% Similarity=0.278 Sum_probs=66.1
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHh----cCCceE--eCCCCC-CchHHHHH
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDH-DKPIQQVL 257 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~----lg~~~v--~~~~~~-~~~~~~~i 257 (379)
+....++.||++||=.|.| .|-++..|++..| -.+|+..+.++++.+.+++ .|.... +...|. ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 4566789999999998764 4666777777776 3489999999998877753 555421 212220 1111
Q ss_pred HHhcCCCccEEE-EcCCCHHHHHHHHHHh-ccCCceEEEEcc
Q 017000 258 VDLTDGGVDYSF-ECIGNVSVMRAALECC-HKGWGTSVIVGV 297 (379)
Q Consensus 258 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~~G~iv~~g~ 297 (379)
.+.....+|.|| |--.....+..+.+.| +++ |+++.+..
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 111123688766 6655567899999999 886 99998854
No 351
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.34 E-value=0.24 Score=44.04 Aligned_cols=102 Identities=18% Similarity=0.147 Sum_probs=59.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC-ChhhH----HHHHhcCCce-E--eCCCCCCchHHHHHHHhcC--C
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~ 263 (379)
+.+|||+|+ |.+|...+.-+...|+ +++.+.+ +.++. ..+++.+... . .|..+ ..++...+.+... +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 679999988 9999998888888999 6665543 32222 2223333322 2 23322 1223233333221 3
Q ss_pred CccEEEEcCCC----------H---------------HHHHHHHHHhccCCceEEEEccCC
Q 017000 264 GVDYSFECIGN----------V---------------SVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 264 ~~d~vid~~g~----------~---------------~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
++|++|.++|. . ...+.+...+++. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 78999999873 1 1134455556675 8999887643
No 352
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.34 E-value=0.012 Score=48.29 Aligned_cols=95 Identities=18% Similarity=0.198 Sum_probs=57.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC----CchHHHHHHHhcCCCccEEEEcCC
Q 017000 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 198 VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~----~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
|+|+|+|++|.+.+..++..|. .|..+.+.+ +.+.+++.|........+. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888999 899998887 7777776654321111000 0000000 111237999999986
Q ss_pred CHH---HHHHHHHHhccCCceEEEEcc
Q 017000 274 NVS---VMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 274 ~~~---~~~~~~~~l~~~~G~iv~~g~ 297 (379)
..+ .++.+...+.+. ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 633 344444445553 56776654
No 353
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.15 Score=45.31 Aligned_cols=75 Identities=16% Similarity=0.106 Sum_probs=48.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc-eE--eCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+.. .. .|..+ ..++.+.+.+. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence 57899988 9999998888888899 899999988877666543321 11 23332 23343444433 2245776665
Q ss_pred CC
Q 017000 272 IG 273 (379)
Q Consensus 272 ~g 273 (379)
+|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 354
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.32 E-value=0.099 Score=47.55 Aligned_cols=78 Identities=23% Similarity=0.289 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+... . .|..+ .......+.+.. .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999989999 8998888776543322 223321 1 22222 122333333222 24
Q ss_pred CccEEEEcCC
Q 017000 264 GVDYSFECIG 273 (379)
Q Consensus 264 ~~d~vid~~g 273 (379)
.+|++|+++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 355
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.31 E-value=0.11 Score=46.44 Aligned_cols=79 Identities=20% Similarity=0.331 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... . .|..+ ...+.+.+.... .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4789999988 9999999999888999 899998887664432 2223222 2 22222 123333333221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 356
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.30 E-value=0.075 Score=54.81 Aligned_cols=76 Identities=25% Similarity=0.333 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh---------------------hHHHHHhcCCceEeCCCCC-C
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~---------------------~~~~~~~lg~~~v~~~~~~-~ 250 (379)
..+++|+|+|+|+.|+.++..+...|+ +|++++..+. ..+.++++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358999999999999999999999999 7888876532 3556677887544332110 0
Q ss_pred chHHHHHHHhcCCCccEEEEcCCC
Q 017000 251 KPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 251 ~~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
..+. .+. ..+|.||.++|.
T Consensus 404 i~~~-~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE-SLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCHH-HHH----hcCCEEEEeCCC
Confidence 1111 111 268999998886
No 357
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.29 E-value=0.15 Score=46.45 Aligned_cols=79 Identities=24% Similarity=0.306 Sum_probs=57.6
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEeCChhhHHHHH-----hcCCc---eEeCCCCCCchHHHHHHHhcC
Q 017000 193 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVT---EFVNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~-a~~la~~~g~~~vi~v~~~~~~~~~~~-----~lg~~---~v~~~~~~~~~~~~~i~~~~~ 262 (379)
+-|++.+|+|+ .++|.+ |-+||+ +|. +|+.++|+++|++..+ +.++. +++|..+.+. ..+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 44799999999 899987 556666 999 8999999999987664 34421 2456655333 4566666666
Q ss_pred C-CccEEEEcCCC
Q 017000 263 G-GVDYSFECIGN 274 (379)
Q Consensus 263 ~-~~d~vid~~g~ 274 (379)
+ .+-++++++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6 78889999886
No 358
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.29 E-value=0.25 Score=45.07 Aligned_cols=97 Identities=18% Similarity=0.192 Sum_probs=66.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceE--e-CCCCC--CchHHHHHHHhcCCCccEEE-
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--V-NPKDH--DKPIQQVLVDLTDGGVDYSF- 269 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v--~-~~~~~--~~~~~~~i~~~~~~~~d~vi- 269 (379)
++|||+|.| -|-.+-.++++...+++++++.+++-.++++++-...- . |.+-. -.|-.+.+++... ++|+||
T Consensus 78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 699999765 34555677888888899999999999999987432110 0 11100 1344455655543 799877
Q ss_pred EcCCC---------HHHHHHHHHHhccCCceEEEE
Q 017000 270 ECIGN---------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 270 d~~g~---------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+.-. .++.+.+-++|+++ |.++.-
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 44333 67899999999996 999877
No 359
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.28 E-value=0.2 Score=44.29 Aligned_cols=91 Identities=27% Similarity=0.392 Sum_probs=55.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-------------------h----HHHHHhcCCceEeCCCCCCc
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-------------------~----~~~~~~lg~~~v~~~~~~~~ 251 (379)
..+|+|+|.|++|..++..+-..|..+++.+|.+.- | .+.+++++.+.-+...+ .
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--~ 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--E 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee--e
Confidence 578999999999999999999999989999975431 1 11222233221111111 1
Q ss_pred hHH-HHHHHhcCCCccEEEEcCCCHHHHHHHHHHhcc
Q 017000 252 PIQ-QVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (379)
Q Consensus 252 ~~~-~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~ 287 (379)
.+. +...++....+|+|+||..+...-..+.+.+..
T Consensus 89 ~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~ 125 (231)
T cd00755 89 FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRK 125 (231)
T ss_pred ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHH
Confidence 111 122233333699999999986655555555555
No 360
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.28 E-value=0.097 Score=46.70 Aligned_cols=78 Identities=26% Similarity=0.359 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
+.+|||+|+ |.+|..++..+...|+ +|+++++++++.+.+.+ .+... + .|..+ ..++...+.+.. .++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 358999988 9999999988888999 89999888776654433 22221 1 23332 133333333321 236
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
.|+||.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988764
No 361
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.27 E-value=0.096 Score=47.01 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=49.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-h----cCCc--eEe--CCCCCCchHHHHHHHhc--C
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT--EFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~----lg~~--~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+++|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. + .+.. +.+ |..+ ..+....+.+.. .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 578999988 9999999998888999 8999988776543332 1 2211 122 2222 122333333321 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998874
No 362
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.26 E-value=0.12 Score=43.34 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=61.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC--ceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~--~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
+|.|+|| |-+|...++=|..+|. .|+++.+++.|....+..-+ ..+++.. ...+ .+ .|+|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~----~~a~---~l--~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT----SLAS---DL--AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh----hhHh---hh--cCCceEEEecc
Confidence 5788998 9999999999999999 89999999998755322111 1122211 1111 11 27999999887
Q ss_pred CH---------HHHHHHHHHhcc-CCceEEEEccCC
Q 017000 274 NV---------SVMRAALECCHK-GWGTSVIVGVAA 299 (379)
Q Consensus 274 ~~---------~~~~~~~~~l~~-~~G~iv~~g~~~ 299 (379)
.. ..++.++..++. +--|+..+|...
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 63 124445666665 224777887654
No 363
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.26 E-value=0.11 Score=47.26 Aligned_cols=102 Identities=14% Similarity=0.259 Sum_probs=64.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCChh---hHH-HHHhcCCceE--eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~~---~~~-~~~~lg~~~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.++++++ +.+ ...+++.... .|..+ .......+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4789999987 4899999998888999 8888877742 222 2234453322 33333 123333333332 2
Q ss_pred CCccEEEEcCCCH-----------------------------HHHHHHHHHhccCCceEEEEccC
Q 017000 263 GGVDYSFECIGNV-----------------------------SVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 263 ~~~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+.+|++++++|.. ...+..+..+.++ |+|+.++..
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 4799999988731 0245566667775 999988754
No 364
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.25 E-value=0.11 Score=47.42 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=55.3
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 193 ~~g~~VlI~Gag~-vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
-.|++|+|+|+|. +|...++++...|+ +|+.+.+..+ ++.+.+ ..+|+|+++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEEc
Confidence 5789999999976 99999999999999 8888854211 111111 258999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 272 IGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+|.+..+. ...++++ ..++.+|..
T Consensus 210 tG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 210 VGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred cCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 98866443 3558885 788888754
No 365
>PRK07574 formate dehydrogenase; Provisional
Probab=95.25 E-value=0.16 Score=48.48 Aligned_cols=46 Identities=24% Similarity=0.344 Sum_probs=37.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
.|++|.|+|.|.+|..+++.++.+|. +|++.+++....+..+.+|.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~ 236 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGL 236 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCc
Confidence 57899999999999999999999999 99999887643344444443
No 366
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.25 E-value=0.11 Score=46.30 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+. +.+... ++ |..+ ...+.+.+.+.. .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999999988999 8998888876654332 223222 22 2222 122333333322 13
Q ss_pred CccEEEEcCC
Q 017000 264 GVDYSFECIG 273 (379)
Q Consensus 264 ~~d~vid~~g 273 (379)
++|++|.++|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 367
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.25 E-value=0.27 Score=38.16 Aligned_cols=74 Identities=24% Similarity=0.332 Sum_probs=53.1
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 017000 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 198 VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 276 (379)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .-.+.+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~---~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA---TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T---TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc---hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999665 899999999999999998855 433322 1122344432237899888887743
No 368
>PRK06484 short chain dehydrogenase; Validated
Probab=95.21 E-value=0.084 Score=52.83 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCce---EeCCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~---v~~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
+++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5789999988 9999999999999999 899998888776544 4455432 233332 133333333322 24799
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998764
No 369
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.21 E-value=0.21 Score=44.55 Aligned_cols=74 Identities=30% Similarity=0.302 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCCccE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~d~ 267 (379)
+++++||+|+ |.+|...+..+...|+ +|++++++. ....+... . .|..+ ...+.+.+.+.. .+.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999988 9999999998888999 888887765 12222211 1 12222 123333333322 136899
Q ss_pred EEEcCCC
Q 017000 268 SFECIGN 274 (379)
Q Consensus 268 vid~~g~ 274 (379)
+|++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998875
No 370
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.20 E-value=0.11 Score=46.53 Aligned_cols=79 Identities=20% Similarity=0.207 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHH---HHHhcCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~---~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
.+++|||+|+ |.+|...++.+...|+ +|+++.++++..+ ...+.+.+. + .|..+ .......+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 5789999988 9999999999999999 7888877632111 222334322 1 23322 122222333322 236
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 371
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.20 E-value=0.12 Score=45.79 Aligned_cols=79 Identities=23% Similarity=0.214 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH-HhcCCce-Ee--CCCCCCchHHHHHHHhc--CCCcc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
++.++||+|+ |.+|..++..+...|+ .|+..+++.++.+.+ ..++... ++ |..+ ...+.+.+.+.. .+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4679999988 9999999998888998 788877776665543 3343322 22 2222 122222222221 13799
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 372
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.13 Score=47.13 Aligned_cols=80 Identities=26% Similarity=0.231 Sum_probs=49.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh---------hhHH-HHH---hcCCceE---eCCCCCCchHHH
Q 017000 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFD-RAK---NFGVTEF---VNPKDHDKPIQQ 255 (379)
Q Consensus 193 ~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~---------~~~~-~~~---~lg~~~v---~~~~~~~~~~~~ 255 (379)
-.++++||+|+ +++|...++.+...|+ +|+.++++. ++.+ .+. +.+.... .|..+ .++..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 35789999988 9999999998888999 788776543 3322 222 2343322 23222 123333
Q ss_pred HHHHhc--CCCccEEEEcCCC
Q 017000 256 VLVDLT--DGGVDYSFECIGN 274 (379)
Q Consensus 256 ~i~~~~--~~~~d~vid~~g~ 274 (379)
.+.+.. .+.+|++|+++|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 333322 2479999998874
No 373
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.16 E-value=0.12 Score=45.72 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |.+|..++..+...|+ +|+.+++++++.+.. +..+... ++ |..+ ..++.+.++... .+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999988 9999999988888999 899998887654432 2233222 22 2222 123333333322 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998864
No 374
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.14 E-value=0.084 Score=45.66 Aligned_cols=35 Identities=37% Similarity=0.541 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999889999877
No 375
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.13 E-value=0.3 Score=43.98 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=67.7
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhc-CC
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DG 263 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~-g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~-~~ 263 (379)
++......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. . +.. ++. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~~----~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DVR----DWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Chh----hCCCCC
Confidence 34555667889999998864 67777888775 55 899999999988888876654222 1 111 111 23
Q ss_pred CccEEEEcCC-----C-HHHHHHHHHHhccCCceEEEE
Q 017000 264 GVDYSFECIG-----N-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 264 ~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.||+|+-... . ...+..+.+.|+++ |+++..
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 7999986432 1 45678889999997 998765
No 376
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.10 E-value=0.092 Score=47.55 Aligned_cols=104 Identities=16% Similarity=0.326 Sum_probs=73.3
Q ss_pred hcchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce---Ee--CCCCCCch
Q 017000 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FV--NPKDHDKP 252 (379)
Q Consensus 182 a~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~---v~--~~~~~~~~ 252 (379)
++..+.++.+++||++||=+|+| =|-+++-+|+..|+ +|++++-|++..+.+++ .|... +. ++.+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 34446788999999999999885 36667778888899 99999999988766654 55541 11 2221
Q ss_pred HHHHHHHhcCCCccEEEE-----cCCC---HHHHHHHHHHhccCCceEEEEccCCC
Q 017000 253 IQQVLVDLTDGGVDYSFE-----CIGN---VSVMRAALECCHKGWGTSVIVGVAAS 300 (379)
Q Consensus 253 ~~~~i~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~~ 300 (379)
+ .+.||-|+. -.|. ++.+..+.+.|+++ |++++......
T Consensus 134 -------~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 134 -------F-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred -------c-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 1 124776653 3333 57789999999997 99988766543
No 377
>PLN03139 formate dehydrogenase; Provisional
Probab=95.07 E-value=0.18 Score=48.09 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=37.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 58899999999999999999999999 89999877544444444543
No 378
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.07 E-value=0.19 Score=44.42 Aligned_cols=34 Identities=35% Similarity=0.384 Sum_probs=30.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
..+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5799999999999999999999999888888643
No 379
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.06 E-value=0.12 Score=46.73 Aligned_cols=78 Identities=19% Similarity=0.279 Sum_probs=47.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEe--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Gag---~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.|+++||+|++ ++|.++++.+...|+ +|+.++++++..+.+++ .+....+ |..+ ..+....+.+.. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 57899999883 799998888888999 78887776321222222 2222222 3322 133333333322 2
Q ss_pred CCccEEEEcCC
Q 017000 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~~~d~vid~~g 273 (379)
+.+|++|+++|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 47999999987
No 380
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.099 Score=46.95 Aligned_cols=75 Identities=24% Similarity=0.202 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~d~vi 269 (379)
+|++|||+|+ |++|...++.+...|+ +|+++++++++. . .-.... ..|..+ .....+.+.+.. .+++|++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~--~-~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD--L-PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh--c-CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999988 9999999999888999 899988875532 1 111111 123322 122222222221 23799999
Q ss_pred EcCC
Q 017000 270 ECIG 273 (379)
Q Consensus 270 d~~g 273 (379)
+++|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 381
>PRK00536 speE spermidine synthase; Provisional
Probab=95.04 E-value=0.081 Score=47.62 Aligned_cols=99 Identities=13% Similarity=-0.043 Sum_probs=65.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEE-EcCC
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF-ECIG 273 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vi-d~~g 273 (379)
-++|||+|+|- |.++-.++|+- .+|+.++.+++-.+.++++-...--..++..-.+...+.+...+.+|+|| |+.-
T Consensus 73 pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs~~ 149 (262)
T PRK00536 73 LKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQEP 149 (262)
T ss_pred CCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcCCC
Confidence 49999997643 44556788775 38999999999888888743211000111111222233343334799866 7677
Q ss_pred CHHHHHHHHHHhccCCceEEEEcc
Q 017000 274 NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 274 ~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++++.+.+.++|+++ |.+|.-+.
T Consensus 150 ~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 150 DIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred ChHHHHHHHHhcCCC-cEEEECCC
Confidence 778889999999997 99987643
No 382
>PRK08328 hypothetical protein; Provisional
Probab=95.03 E-value=0.12 Score=45.94 Aligned_cols=35 Identities=40% Similarity=0.473 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999899998743
No 383
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.01 E-value=0.12 Score=42.46 Aligned_cols=74 Identities=19% Similarity=0.212 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHH-HHhcCCce-EeCCCCCCchHHHHHHHhcCCCccEEEE
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-~~~lg~~~-v~~~~~~~~~~~~~i~~~~~~~~d~vid 270 (379)
..+.+|+|+|+|.+|...++.+...|..+|+++++++++.+. +++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 457899999999999999998888874489999888876554 44555421 01111 11111 136999999
Q ss_pred cCCCH
Q 017000 271 CIGNV 275 (379)
Q Consensus 271 ~~g~~ 275 (379)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 98773
No 384
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.00 E-value=0.14 Score=46.24 Aligned_cols=79 Identities=22% Similarity=0.318 Sum_probs=48.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCceEe--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+.++..+.++ +.+....+ |..+ .++....+.+.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5789999984 5899999998888999 7887755543333332 23432222 3222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999998764
No 385
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.95 E-value=0.11 Score=44.69 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=58.6
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCC
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
+.....++.+||-+|+| .|..+..+++ .|. +|++++.+++-.+.+++ .+....... .++.. ... .+
T Consensus 24 ~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~----~d~~~--~~~-~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDA----YDINA--AAL-NE 93 (195)
T ss_pred HHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEe----ccchh--ccc-cC
Confidence 33444456789988875 4666666665 577 89999999876665543 232211100 11100 011 23
Q ss_pred CccEEEEcCC-----C---HHHHHHHHHHhccCCceEEEEc
Q 017000 264 GVDYSFECIG-----N---VSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 264 ~~d~vid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g 296 (379)
.+|+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6999875421 1 35678888899997 9965553
No 386
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.95 E-value=0.35 Score=44.22 Aligned_cols=61 Identities=20% Similarity=0.310 Sum_probs=45.4
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEe--CChhhHHHHHhcCCceEeCCC
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPK 247 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~--~~~~~~~~~~~lg~~~v~~~~ 247 (379)
...+.++||++|+=--+|..|++++.+|+.+|++-+++.. -+.+|+++++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 4556699999544433499999999999999994444443 367899999999997655443
No 387
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.95 E-value=0.21 Score=44.04 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=58.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh--cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN--FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~--lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
+++|.|+|.+|...++.+...|. .|++++.++++.+...+ ++. +++..+. .-.+.+++.--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999999 89999999998777333 554 3443332 12234555533489999998888
Q ss_pred HHHHHHHHHHh
Q 017000 275 VSVMRAALECC 285 (379)
Q Consensus 275 ~~~~~~~~~~l 285 (379)
.. .+..+-.+
T Consensus 77 d~-~N~i~~~l 86 (225)
T COG0569 77 DE-VNSVLALL 86 (225)
T ss_pred CH-HHHHHHHH
Confidence 33 44444333
No 388
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.15 Score=47.26 Aligned_cols=34 Identities=29% Similarity=0.279 Sum_probs=30.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.|+++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4789999988 9999999999999999 88888776
No 389
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.94 E-value=0.16 Score=42.93 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
+|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999899998899998764
No 390
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.93 E-value=0.086 Score=46.03 Aligned_cols=97 Identities=22% Similarity=0.195 Sum_probs=62.2
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHHHh
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~ 260 (379)
....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ ++... ++..+ ..+ ..
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d-----~~~---~~ 139 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD-----GWK---GW 139 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC-----ccc---CC
Confidence 4556788999999998852 55555666654 3 89999999877665543 34432 12111 100 11
Q ss_pred c-CCCccEEEEcCCCHHHHHHHHHHhccCCceEEEE
Q 017000 261 T-DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 261 ~-~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
. .+.||+|+-..........+.+.|+++ |+++..
T Consensus 140 ~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 140 PAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred CcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 1 137998886555556677888999997 998754
No 391
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.93 E-value=0.13 Score=46.81 Aligned_cols=79 Identities=18% Similarity=0.276 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhh-------H----HHHHhcCCce-E--eCCCCCCchHHHHHH
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------F----DRAKNFGVTE-F--VNPKDHDKPIQQVLV 258 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~-------~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~ 258 (379)
.++++||+|+ |.+|..++..+...|+ +|++++++.++ + +.+++.+... + .|..+ .....+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4679999988 9999999998888999 88888876432 1 1122334332 1 23332 122333333
Q ss_pred Hhc--CCCccEEEEcCCC
Q 017000 259 DLT--DGGVDYSFECIGN 274 (379)
Q Consensus 259 ~~~--~~~~d~vid~~g~ 274 (379)
+.. .+.+|++|+++|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 221 1379999998874
No 392
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.92 E-value=0.17 Score=45.96 Aligned_cols=95 Identities=20% Similarity=0.214 Sum_probs=65.0
Q ss_pred ccccccchhhcchhhhccCCC-CCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCC
Q 017000 173 CLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLG-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 173 a~l~~~~~ta~~al~~~~~~~-~g~~VlI~Gag-~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
+.+||+....+. +++..++. .|++|+|+|.| .+|.-+++++...|+ +|..+....
T Consensus 135 ~~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t--------------------- 191 (285)
T PRK14191 135 GFVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT--------------------- 191 (285)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc---------------------
Confidence 345655554444 44544543 69999999985 999999999999999 777762211
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.++.+.++ .+|+|+-++|.+.++. -..++++ ..++.+|..
T Consensus 192 ~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 12222222 3899999999977654 3457886 888999864
No 393
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.91 E-value=0.13 Score=49.22 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999876
No 394
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.91 E-value=0.25 Score=45.17 Aligned_cols=88 Identities=16% Similarity=0.232 Sum_probs=56.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCHH
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 276 (379)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|..... . .+. +.+ ..+|+||-|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~--~~~-~~~-----~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S--TDL-SLL-----KDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c--CCH-hHh-----cCCCEEEEcCCHHH
Confidence 58899999999988888888898 899999999988888877752111 0 111 111 25788888877633
Q ss_pred H---HHHHHHHhccCCceEEEEcc
Q 017000 277 V---MRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 277 ~---~~~~~~~l~~~~G~iv~~g~ 297 (379)
. +..+...++++ -.++.++.
T Consensus 70 ~~~~~~~l~~~l~~~-~ii~d~~S 92 (279)
T PRK07417 70 LLPPSEQLIPALPPE-AIVTDVGS 92 (279)
T ss_pred HHHHHHHHHHhCCCC-cEEEeCcc
Confidence 2 23333334443 44444443
No 395
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.89 E-value=0.21 Score=43.09 Aligned_cols=94 Identities=15% Similarity=0.179 Sum_probs=58.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-------------------h----HHHHHhcCCceEeCCCCCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-------------------K----FDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-------------------~----~~~~~~lg~~~v~~~~~~~ 250 (379)
...+|+|+|+|++|.-.+..+-..|..++..+|...= | .+.+++++.+..+....
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4688999999999999999999999988999875421 1 12244455543332221
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCce
Q 017000 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 291 (379)
Q Consensus 251 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~ 291 (379)
..+.+...+.. .++|+|++|..+.+....+-+.+... +.
T Consensus 98 ~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~i 136 (197)
T cd01492 98 DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GV 136 (197)
T ss_pred cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CC
Confidence 11111111221 26899999988866555555555553 44
No 396
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.89 E-value=0.26 Score=44.04 Aligned_cols=101 Identities=17% Similarity=0.291 Sum_probs=66.3
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhc---
Q 017000 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT--- 261 (379)
Q Consensus 190 ~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~--- 261 (379)
.+...-++||-+|.+ +|+.++.+|+.++- .+++.++.++++.+.+++ .|...-+.... .+..+.+.++.
T Consensus 75 ~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~~ 151 (247)
T PLN02589 75 LKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIEDG 151 (247)
T ss_pred HHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhcc
Confidence 344556789999873 68888899988742 389999999988777653 45433222222 34445555542
Q ss_pred --CCCccEEEEcCCC---HHHHHHHHHHhccCCceEEE
Q 017000 262 --DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 262 --~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~ 294 (379)
.+.||.||--+.. ...+..++.+++++ |.++.
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 2479998843222 45578889999996 77663
No 397
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.89 E-value=0.11 Score=49.32 Aligned_cols=37 Identities=35% Similarity=0.461 Sum_probs=33.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~ 230 (379)
-.|.+|.|.|.|.+|..+++.+..+|+ +|++++.+..
T Consensus 205 l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 205 LEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred cCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 489999999999999999999999999 8888877665
No 398
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.87 E-value=0.21 Score=46.95 Aligned_cols=37 Identities=32% Similarity=0.512 Sum_probs=33.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 58999999999999999999999999 89999876543
No 399
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.85 E-value=0.13 Score=45.72 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce--E--eCCCC-CCchHHHHHHHhc
Q 017000 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE--F--VNPKD-HDKPIQQVLVDLT 261 (379)
Q Consensus 192 ~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~--v--~~~~~-~~~~~~~~i~~~~ 261 (379)
..++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+... + .+.+. ...++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457899999988 9999999888888899 899998887654332 2333221 2 22221 1123333333222
Q ss_pred C--CCccEEEEcCCC
Q 017000 262 D--GGVDYSFECIGN 274 (379)
Q Consensus 262 ~--~~~d~vid~~g~ 274 (379)
. +.+|++|.++|.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 368999988764
No 400
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.15 Score=46.18 Aligned_cols=76 Identities=20% Similarity=0.234 Sum_probs=48.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCceE-e--CCCCCCchHHHHHHHhc--CCCcc
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGVD 266 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~v-~--~~~~~~~~~~~~i~~~~--~~~~d 266 (379)
+|||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ +..+.+.. + |..+ ..++.+.+.... .+++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899988 9999999988888899 888888887765432 22333321 1 2222 122333333221 23799
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
++|+++|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 401
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.83 E-value=0.26 Score=44.81 Aligned_cols=100 Identities=18% Similarity=0.107 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc--eEeCCCCC---CchHHHHHHHhcCCCccEE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~---~~~~~~~i~~~~~~~~d~v 268 (379)
..++||++|+|. |..+..+++.....++++++.+++-.+.+++.-.. ..++.... ..+..+.+++. .+.+|+|
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDvI 149 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDVI 149 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccEE
Confidence 346999998864 44556666666566899999998877777663211 00100000 02333334332 3489998
Q ss_pred EEcCC----------CHHHHHHHHHHhccCCceEEEEc
Q 017000 269 FECIG----------NVSVMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 269 id~~g----------~~~~~~~~~~~l~~~~G~iv~~g 296 (379)
+--.. ..++++.+.+.|+++ |.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 74222 235678889999997 9998763
No 402
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.82 E-value=0.17 Score=45.36 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+++|||+|+ +.+|...+..+...|+ +++.++++.++.+.+ ++.+.+. + .|..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999988 9999999998888999 788887777655433 2233322 2 23332 122333333321 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++++++|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 403
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.80 E-value=0.19 Score=45.39 Aligned_cols=79 Identities=23% Similarity=0.388 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ +.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .....+.+.+.. .+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5689999988 9999998888888899 788888887665433 2334332 1 23222 122222232221 13
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 404
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.78 E-value=0.2 Score=45.50 Aligned_cols=80 Identities=23% Similarity=0.346 Sum_probs=49.2
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCCh---hhHH-HHHhcCCceEe--CCCCCCchHHHHHHHhc-
Q 017000 192 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFD-RAKNFGVTEFV--NPKDHDKPIQQVLVDLT- 261 (379)
Q Consensus 192 ~~~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~---~~~~-~~~~lg~~~v~--~~~~~~~~~~~~i~~~~- 261 (379)
.-.++++||+|+ +++|.+.+..+...|+ +|+.+.+++ ++.+ +.++++....+ |..+ ..+..+.+.+..
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHH
Confidence 345789999987 5899999999989999 888776653 2332 22344532222 2222 123333333322
Q ss_pred -CCCccEEEEcCC
Q 017000 262 -DGGVDYSFECIG 273 (379)
Q Consensus 262 -~~~~d~vid~~g 273 (379)
.+.+|++++++|
T Consensus 85 ~~g~iD~lv~nAG 97 (272)
T PRK08159 85 KWGKLDFVVHAIG 97 (272)
T ss_pred hcCCCcEEEECCc
Confidence 247999999876
No 405
>PRK12743 oxidoreductase; Provisional
Probab=94.77 E-value=0.17 Score=45.38 Aligned_cols=78 Identities=19% Similarity=0.124 Sum_probs=47.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEe-CChhhHHH----HHhcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR----AKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~----~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
+++|||+|+ |.+|..+++.+...|+ +|+.+. ++.++.+. ++..+... . .|..+ .......+.+.. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 578999988 9999999999999999 777664 34443322 23345332 2 23322 122222222221 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 406
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.76 E-value=0.26 Score=43.73 Aligned_cols=76 Identities=22% Similarity=0.253 Sum_probs=48.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-h---cC-Cc-eEe--CCCCCCchHHHHHHHhcCCCcc
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FG-VT-EFV--NPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~---lg-~~-~v~--~~~~~~~~~~~~i~~~~~~~~d 266 (379)
++|+|+|+ |.+|...+..+...|+ +|+++++++++.+... + .+ .. +++ |..+ ..+..+.+.+.. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~-~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSLP-ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHHh-hcCC
Confidence 57999988 9999999999888999 8999988887654322 1 11 11 122 2222 123333333322 2579
Q ss_pred EEEEcCCC
Q 017000 267 YSFECIGN 274 (379)
Q Consensus 267 ~vid~~g~ 274 (379)
+++.++|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987764
No 407
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.76 E-value=0.31 Score=46.87 Aligned_cols=81 Identities=21% Similarity=0.319 Sum_probs=51.0
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHH-------HHHhc-CCceE-eCCCCCCchHHHHHHHh
Q 017000 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 191 ~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~-------~~~~l-g~~~v-~~~~~~~~~~~~~i~~~ 260 (379)
+-..+.+|||+|+ |.+|..++..+...|+ +|+++.++..+.+ ..... ++..+ .|..+ ...+...+...
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~ 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh
Confidence 4456789999988 9999999999888999 8999888765321 11112 22222 23332 12333333322
Q ss_pred cCCCccEEEEcCCC
Q 017000 261 TDGGVDYSFECIGN 274 (379)
Q Consensus 261 ~~~~~d~vid~~g~ 274 (379)
..++|+||+|++.
T Consensus 134 -~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 -GDPVDVVVSCLAS 146 (390)
T ss_pred -CCCCcEEEECCcc
Confidence 1169999998764
No 408
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.74 E-value=0.25 Score=45.96 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~ 230 (379)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 8999877554
No 409
>PLN02244 tocopherol O-methyltransferase
Probab=94.70 E-value=0.098 Score=49.32 Aligned_cols=95 Identities=22% Similarity=0.307 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce---EeCCCCCCchHHHHHHHhcCCCc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~---v~~~~~~~~~~~~~i~~~~~~~~ 265 (379)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .|... ++..+. .++ .+..+.|
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~--~~~-----~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA--LNQ-----PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc--ccC-----CCCCCCc
Confidence 688999999885 46677788887788 99999999887666554 23211 111111 000 1223479
Q ss_pred cEEEEcCCC------HHHHHHHHHHhccCCceEEEEcc
Q 017000 266 DYSFECIGN------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 266 d~vid~~g~------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
|+|+-.... ...+.++.+.|+++ |+++....
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 999854221 35678899999997 99987654
No 410
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.69 E-value=0.2 Score=47.45 Aligned_cols=36 Identities=31% Similarity=0.296 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
.+.+|||+|+|++|..+++.+...|..+++.++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 458999999999999999999999999999998653
No 411
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.68 E-value=0.13 Score=45.77 Aligned_cols=79 Identities=18% Similarity=0.216 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-eCChh-hHHHH---HhcCCceE---eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPK-KFDRA---KNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v-~~~~~-~~~~~---~~lg~~~v---~~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ |.+|..+++.+...|+ +|++. .+.+. +.+.+ ++.+.... .|..+ ..+..+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3678999988 9999999999999999 66664 33332 22222 33454332 23322 122333333221 1
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 412
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.65 E-value=0.2 Score=44.88 Aligned_cols=100 Identities=19% Similarity=0.132 Sum_probs=59.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc--CCceE-eCCCCCCchHHHHHHHhcCCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF--GVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l--g~~~v-~~~~~~~~~~~~~i~~~~~~~~d~vi 269 (379)
.+.+|||+|+ |.+|..++..+...|+ +|+++.+++++....... ++..+ .|..+ . . +.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~-~-~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G-S-DKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C-H-HHHHHHhhcCCCEEE
Confidence 4689999998 9999999988888898 888888887765433221 22211 23322 1 1 122222212689999
Q ss_pred EcCCCHH-------------HHHHHHHHhccC-CceEEEEccC
Q 017000 270 ECIGNVS-------------VMRAALECCHKG-WGTSVIVGVA 298 (379)
Q Consensus 270 d~~g~~~-------------~~~~~~~~l~~~-~G~iv~~g~~ 298 (379)
.+.|... ....+++.+... .+++|.++..
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 123344444432 2578887654
No 413
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.64 E-value=0.11 Score=46.77 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhc--CCCccEEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~--~~~~d~vi 269 (379)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+. ..... ..|..+ ..++.+.+.+.. .+.+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999988 9999999999999999 88888777654321 11111 123332 123333333322 23789999
Q ss_pred EcCCC
Q 017000 270 ECIGN 274 (379)
Q Consensus 270 d~~g~ 274 (379)
+++|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 414
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.64 E-value=0.47 Score=42.29 Aligned_cols=79 Identities=18% Similarity=0.237 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EeCChhhHHHH-Hh---cCCce-Ee--CCCCCCchHHHHHHHhc---
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~-v~~~~~~~~~~-~~---lg~~~-v~--~~~~~~~~~~~~i~~~~--- 261 (379)
.+.+++|+|+ |.+|..+++.+...|+ +|++ ..++.++.+.+ .+ .+... ++ |..+ ..++...+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 3679999988 9999999998888899 6655 45666544322 22 23222 22 3322 133333333321
Q ss_pred ----C-CCccEEEEcCCC
Q 017000 262 ----D-GGVDYSFECIGN 274 (379)
Q Consensus 262 ----~-~~~d~vid~~g~ 274 (379)
. +++|++|.++|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999998875
No 415
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.61 E-value=0.6 Score=41.63 Aligned_cols=104 Identities=19% Similarity=0.172 Sum_probs=60.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEe-CChhhHH-HHH---hcCCceE---eCCCCC--CchHHHHHHHh--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFD-RAK---NFGVTEF---VNPKDH--DKPIQQVLVDL-- 260 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~-~~~---~lg~~~v---~~~~~~--~~~~~~~i~~~-- 260 (379)
.++++||+|+ |++|.++++.+...|+ +|+.+. +.+++.+ ... +.+.... .|..+. ...+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999988 9999999999999999 777653 4444332 222 2232211 122220 01122222221
Q ss_pred --cC-CCccEEEEcCCCH----------H---------------HHHHHHHHhccCCceEEEEccCC
Q 017000 261 --TD-GGVDYSFECIGNV----------S---------------VMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 261 --~~-~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
.. +++|++++++|.. + +++.++..+.+. |+||.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 11 2699999988731 0 133456666775 9999887653
No 416
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.59 E-value=0.23 Score=45.59 Aligned_cols=57 Identities=18% Similarity=0.155 Sum_probs=47.3
Q ss_pred hhccCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC---ChhhHHHHHhcCCceEe
Q 017000 187 WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKNFGVTEFV 244 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~---~~~~~~~~~~lg~~~v~ 244 (379)
...+.+.||.++||=.. |..|...+.++...|+ ++|++-. +.||...++.+|+..+.
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 35567999999999977 9999999999999999 6776643 56889999999996553
No 417
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.58 E-value=1.9 Score=37.78 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=56.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC--hhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~--~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.+.+|||+|+|.+|.-=+..+...|+ +|++++.. ++-.+++ +.|.-..+. .+.... . + .++++||-|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~-~~~~i~~~~-r~~~~~---d---l--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLK-KYGNLKLIK-GNYDKE---F---I--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHH-hCCCEEEEe-CCCChH---H---h--CCCcEEEEC
Confidence 57899999999999988888888999 77777543 2322332 233222221 111111 0 1 378999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++.+..-..+....+. .+.++....
T Consensus 93 TdD~~vN~~I~~~a~~-~~~lvn~vd 117 (223)
T PRK05562 93 TDDEKLNNKIRKHCDR-LYKLYIDCS 117 (223)
T ss_pred CCCHHHHHHHHHHHHH-cCCeEEEcC
Confidence 9986644444444445 377776644
No 418
>PRK08618 ornithine cyclodeaminase; Validated
Probab=94.58 E-value=0.47 Score=44.40 Aligned_cols=94 Identities=15% Similarity=0.080 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEeCChhhHHHHHh-----cCCceEeCCCCCCchHHHHHHHhcCCCcc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDRAKN-----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~l-a~~~g~~~vi~v~~~~~~~~~~~~-----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d 266 (379)
...++++|+|+|..|...+.. +...++++|.++++++++.+.+.+ ++.. +..+. +..+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 346789999999999876654 456788899999999887654432 3432 22222 222233 2589
Q ss_pred EEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 017000 267 YSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 267 ~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
+|+.|+++.+.+- . ..++++ -.+..+|...
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 9999988865333 3 778885 7788888753
No 419
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.56 E-value=0.09 Score=49.68 Aligned_cols=75 Identities=20% Similarity=0.141 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHH-HHHhcC--Cce-Ee--CCCCCCchHHHHHHHhcCC-Cc
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFG--VTE-FV--NPKDHDKPIQQVLVDLTDG-GV 265 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~-~~~~lg--~~~-v~--~~~~~~~~~~~~i~~~~~~-~~ 265 (379)
+|.+|||+|+ |.+|..+++.+...|. +|+++++++.... ....++ ... .+ |..+ . +.+.+.... ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~---~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD--A---AKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC--H---HHHHHHHhhcCC
Confidence 4789999987 9999999999999999 8888877655322 111121 111 11 2222 1 123333333 68
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|+||++++.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
No 420
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.52 E-value=0.16 Score=42.23 Aligned_cols=46 Identities=24% Similarity=0.268 Sum_probs=39.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
.|..||++|+ -++|...++-+...|+ +||++.+.++.+..+.+.-.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p 52 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETP 52 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCC
Confidence 5789999998 7899999999999999 99999999998877765443
No 421
>PLN02823 spermine synthase
Probab=94.51 E-value=0.37 Score=45.16 Aligned_cols=99 Identities=19% Similarity=0.141 Sum_probs=62.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc--eEeCCCCC---CchHHHHHHHhcCCCccEE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKDH---DKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v~~~~~~---~~~~~~~i~~~~~~~~d~v 268 (379)
..++|||+|.| -|..+.++++..+..+|++++.+++-.++++++... ..++.... ..|-...+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG-~G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGG-EGSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCC-chHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 34789999875 355566777777777999999999999999875321 01110000 1233444533 33489987
Q ss_pred E-EcCC-----------CHHHHH-HHHHHhccCCceEEEE
Q 017000 269 F-ECIG-----------NVSVMR-AALECCHKGWGTSVIV 295 (379)
Q Consensus 269 i-d~~g-----------~~~~~~-~~~~~l~~~~G~iv~~ 295 (379)
| |... +.+++. .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 7 4321 124566 788899997 998754
No 422
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.50 E-value=0.23 Score=43.91 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh-hHH-H---HHhcCCce-Ee--CCCCCCchHHHHHHHhcC--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-R---AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~~~-~---~~~lg~~~-v~--~~~~~~~~~~~~i~~~~~-- 262 (379)
.+.++||+|+ |.+|..++..+...|+ +|+++.++.. +.+ . ++..+... ++ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3578999988 9999999999999999 6766655443 222 1 22233322 22 3322 1233333333222
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|.++.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999998874
No 423
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.49 E-value=0.23 Score=47.92 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCc-eE--eCCCCCCchHHHHHHHhcCCCccEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~-~v--~~~~~~~~~~~~~i~~~~~~~~d~v 268 (379)
.+++|+|+|+ |++|.+.+..+...|+ +|+++++++++.+... +.+.. .. .|..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4789999988 9999999998888999 8998888776553322 11111 12 23222 1 1222222 369999
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
|+++|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988764
No 424
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.49 E-value=0.17 Score=45.54 Aligned_cols=102 Identities=22% Similarity=0.281 Sum_probs=60.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCCh------hhHHHHHhcCCc-eE--eCCCCCCchHHHHHHHhc
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLT 261 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~------~~~~~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~ 261 (379)
.|+++||+|+ +++|.+++..+...|+ +|+.+.++. +..+.+.+.+.. .. .|..+ .++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4789999986 4899999988888999 777664332 222223222221 12 23322 123333333322
Q ss_pred --CCCccEEEEcCCCH-------H----------------------HHHHHHHHhccCCceEEEEccC
Q 017000 262 --DGGVDYSFECIGNV-------S----------------------VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 262 --~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
.+.+|++++++|.. . ..+.++..++++ |+|+.++..
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 24799999988731 0 134566667775 999988654
No 425
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.47 E-value=0.19 Score=44.69 Aligned_cols=79 Identities=18% Similarity=0.238 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EeCChhhHHH----HHhcCCceE---eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~-v~~~~~~~~~----~~~lg~~~v---~~~~~~~~~~~~~i~~~~--~ 262 (379)
++.++||+|+ |.+|..++..+...|+ +|+. ..++.++.+. +++.+.... .|..+ ..+....+.+.. .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4679999988 9999999999999999 6655 4555554332 233343322 22222 123333333322 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++|+++|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998874
No 426
>PLN00203 glutamyl-tRNA reductase
Probab=94.45 E-value=0.19 Score=50.05 Aligned_cols=72 Identities=14% Similarity=0.266 Sum_probs=51.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcC-Cce-EeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg-~~~-v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. .++ ... +.... +..+.+ ..+|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~----dl~~al-----~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD----EMLACA-----AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh----hHHHHH-----hcCCEEEEc
Confidence 689999999999999999999999878999999988866554 453 221 11111 121111 258999999
Q ss_pred CCCH
Q 017000 272 IGNV 275 (379)
Q Consensus 272 ~g~~ 275 (379)
++.+
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 8763
No 427
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.44 E-value=0.41 Score=42.06 Aligned_cols=95 Identities=25% Similarity=0.291 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce--EeCCCCCCchHHHHHHHhcCCCccEEEE
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~--v~~~~~~~~~~~~~i~~~~~~~~d~vid 270 (379)
-+|.+||=+|+| .|+++..+| .+|+ +|+++|-+++-.+.++.-.... -++|.. ...+.+.... +.||+|+.
T Consensus 58 l~g~~vLDvGCG-gG~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCG-GGILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCC-ccHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhcC-CCccEEEE
Confidence 478999999984 245444444 4678 9999999999888887432211 134433 3333333321 48999985
Q ss_pred c-----CCC-HHHHHHHHHHhccCCceEEEE
Q 017000 271 C-----IGN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 271 ~-----~g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
. +.. ..++..+.++++|+ |.+..-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 3 222 35788899999996 887644
No 428
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.42 E-value=0.76 Score=34.20 Aligned_cols=75 Identities=23% Similarity=0.339 Sum_probs=48.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEEEE-eCChhhHHHH-HhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAG---ASRVIGI-DIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g---~~~vi~v-~~~~~~~~~~-~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
+|.|+|+|.+|.+.+.-+...| . +|+.+ ++++++.+.+ ++++..... .+..+.++ ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 4778899999999999988888 6 77744 8999887666 456643221 12333333 37999999
Q ss_pred CCCHHHHHHHHHH
Q 017000 272 IGNVSVMRAALEC 284 (379)
Q Consensus 272 ~g~~~~~~~~~~~ 284 (379)
+.... +...+..
T Consensus 69 v~p~~-~~~v~~~ 80 (96)
T PF03807_consen 69 VKPQQ-LPEVLSE 80 (96)
T ss_dssp S-GGG-HHHHHHH
T ss_pred ECHHH-HHHHHHH
Confidence 88744 4444433
No 429
>PLN03075 nicotianamine synthase; Provisional
Probab=94.42 E-value=0.19 Score=46.03 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=65.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHhcCC-----ceEeCCCCCCchHHHHHHHhcCCCccE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGV-----TEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~lg~-----~~v~~~~~~~~~~~~~i~~~~~~~~d~ 267 (379)
+.++|+-+|.|+.++.++.+++... ..+++.++.+++..+.+++.-. ..-+.... .+..+... ..++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhhccc--ccCCcCE
Confidence 7799999999999999888887654 3489999999998888876432 11111111 12221110 1247999
Q ss_pred EEEcC-------CCHHHHHHHHHHhccCCceEEEE
Q 017000 268 SFECI-------GNVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~-------g~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
||-.+ .....+..+.+.|+++ |.++.=
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 98654 2246688999999996 887644
No 430
>PRK09135 pteridine reductase; Provisional
Probab=94.41 E-value=0.26 Score=43.67 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCC-hhhHHHHH----hcCC--ceE--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAK----NFGV--TEF--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~-~~~~~~~~----~lg~--~~v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.+++|||+|+ |.+|..++..+...|+ +|++++++ +++.+.+. +... .+. .|..+ ...+...+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999988 9999999988888899 88888775 33332221 2211 112 23322 122333333221
Q ss_pred CCCccEEEEcCC
Q 017000 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~~~d~vid~~g 273 (379)
.+++|+||.++|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 136899999987
No 431
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.40 E-value=0.29 Score=45.32 Aligned_cols=79 Identities=22% Similarity=0.301 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh-hhH-H---HHHhcCCceEe---CCCCCCchHHHHHHHhc-CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKF-D---RAKNFGVTEFV---NPKDHDKPIQQVLVDLT-DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~-~---~~~~lg~~~v~---~~~~~~~~~~~~i~~~~-~~ 263 (379)
.|+++||+|+ +++|...++.+...|+ +|+.+++.. ++. + .++..|....+ |..+ .+...+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 4789999988 9999999988888999 788876542 222 2 22333433222 2222 112222222211 25
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++|+++|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 432
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.39 E-value=0.22 Score=44.40 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=48.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-E--eCCCCCCchHHHHHHHhc--CCCc
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGV 265 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~~ 265 (379)
+++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... . .|..+ .....+.+.+.. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 36899988 9999999999989999 888888876554322 2334322 1 22222 123333333322 2368
Q ss_pred cEEEEcCCC
Q 017000 266 DYSFECIGN 274 (379)
Q Consensus 266 d~vid~~g~ 274 (379)
|++|+++|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 433
>PRK08223 hypothetical protein; Validated
Probab=94.38 E-value=0.21 Score=45.47 Aligned_cols=35 Identities=31% Similarity=0.285 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|||+|+|++|..+++.+..+|..++..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46899999999999999999999999899988764
No 434
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.37 E-value=0.68 Score=42.88 Aligned_cols=36 Identities=25% Similarity=0.287 Sum_probs=29.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCChhh
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|+++||+|+ +++|.+.++.+...|+ +|+. .+..++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~ 46 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPA 46 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcch
Confidence 5899999988 8999999999999999 7777 344433
No 435
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.36 E-value=0.49 Score=40.32 Aligned_cols=98 Identities=20% Similarity=0.271 Sum_probs=62.7
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHHHh
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~~ 260 (379)
+....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. + ... .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-d----~~~----~ 93 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-E----API----E 93 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-C----chh----h
Confidence 3455677889999888853 6666677776543489999999987766653 33322 2221 1 111 1
Q ss_pred cCCCccEEEEcCCC---HHHHHHHHHHhccCCceEEEE
Q 017000 261 TDGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 261 ~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~iv~~ 295 (379)
..+.+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 12369999854321 34678889999997 998764
No 436
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.32 E-value=0.3 Score=47.59 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=63.1
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHh
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~ 260 (379)
....+++|++||=+|+| .|..++++++.++..+|++++.++++++.++ .+|... + .+.+. ..... ..
T Consensus 232 ~~L~~~~g~~VLDlcag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~--~~~~~---~~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG--RGPSQ---WA 305 (426)
T ss_pred HHhCCCCCCeEEEeCCC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc--ccccc---cc
Confidence 34467889999988774 2444445555555338999999999877664 356542 2 22111 10000 00
Q ss_pred cCCCccEEE-E--cCCC-------------------------HHHHHHHHHHhccCCceEEEEcc
Q 017000 261 TDGGVDYSF-E--CIGN-------------------------VSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 261 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
..+.||.|| | |+|. ...+..+++.++++ |++|+.-.
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 123699887 3 4442 24678889999997 99987643
No 437
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.31 E-value=0.3 Score=49.45 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=57.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCH
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 275 (379)
+.|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...++-... -.+.+++..-+.+|.++-++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 688999999999999999999998 8999999999999999988765543221 12233333223788888776663
Q ss_pred H
Q 017000 276 S 276 (379)
Q Consensus 276 ~ 276 (379)
+
T Consensus 493 ~ 493 (558)
T PRK10669 493 Y 493 (558)
T ss_pred H
Confidence 3
No 438
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.30 E-value=0.37 Score=43.67 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=67.2
Q ss_pred hhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc--eE-eCCCCCCchHHHHHHHhcC
Q 017000 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EF-VNPKDHDKPIQQVLVDLTD 262 (379)
Q Consensus 186 l~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~--~v-~~~~~~~~~~~~~i~~~~~ 262 (379)
+....++.++.+||=+|+| .|..+..+++..++ +|++++.+++-.+.+++.... .+ +... ++.+ .....
T Consensus 44 ~l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~----D~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN----DILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC----Cccc--CCCCC
Confidence 4566778999999999886 35556677777787 899999999887777764221 11 1111 1100 01122
Q ss_pred CCccEEEEc--C---C---CHHHHHHHHHHhccCCceEEEEcc
Q 017000 263 GGVDYSFEC--I---G---NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 263 ~~~d~vid~--~---g---~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+.||+|+.. . + ...+++.+.+.|+|+ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 379999852 1 1 134678888999997 99987654
No 439
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.29 E-value=0.16 Score=50.76 Aligned_cols=71 Identities=23% Similarity=0.247 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-hcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
.+++|||+|+|++|.+++..+...|+ +|++++++.++.+.+. .++.. ++...+ + .+......|++++|+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~----~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD----L----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH----h----hhhccccCeEEEecc
Confidence 46789999999999999999999999 8999988877665544 44321 222211 1 111112578899876
Q ss_pred CC
Q 017000 273 GN 274 (379)
Q Consensus 273 g~ 274 (379)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 54
No 440
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.28 E-value=0.25 Score=43.72 Aligned_cols=78 Identities=23% Similarity=0.367 Sum_probs=47.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-eCChhhHHHHH----hcCCce-Ee--CCCCCCchHHHHHHHhcC--C
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v-~~~~~~~~~~~----~lg~~~-v~--~~~~~~~~~~~~i~~~~~--~ 263 (379)
++++||+|+ |.+|..++..+...|+ +|+.+ ++++++.+.+. ..+... ++ |..+ ...+.+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 578999988 9999999888888899 77777 78776554332 222222 22 2222 1223232322211 3
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998774
No 441
>PRK07411 hypothetical protein; Validated
Probab=94.28 E-value=0.26 Score=47.38 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|||+|+|++|..+++.+...|..+++.+|.+
T Consensus 37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35799999999999999999999999999998754
No 442
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.26 E-value=1.4 Score=38.35 Aligned_cols=94 Identities=15% Similarity=0.117 Sum_probs=62.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh-hhHH-HHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~-~~~~-~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
.|.+|||+|+|.+|.-=+.+....|+ +|+++..+. +.+. +..+.+.+ .+. .. +.. +.. ..+++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~-~~~-~~----~~~---~~~-~~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIK-WIE-RE----FDA---EDL-DDAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcc-hhh-cc----cCh---hhh-cCceEEEEe
Confidence 57899999999999999999999999 777775544 3333 33333211 111 11 100 011 148999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEccCC
Q 017000 272 IGNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
++.++.-....+.+.+ .+.+|...+..
T Consensus 80 t~d~~ln~~i~~~a~~-~~i~vNv~D~p 106 (210)
T COG1648 80 TDDEELNERIAKAARE-RRILVNVVDDP 106 (210)
T ss_pred CCCHHHHHHHHHHHHH-hCCceeccCCc
Confidence 9998866777777777 48888776543
No 443
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.26 E-value=0.32 Score=46.38 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
.+.+|||+|+|++|..+++.+...|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999999899999865
No 444
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.25 E-value=0.29 Score=50.08 Aligned_cols=77 Identities=18% Similarity=0.328 Sum_probs=58.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCC
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
.+.|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|.+.++- +. .-.+.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Da---t~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DA---TRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eC---CCHHHHHhcCCCcCCEEEEEeCC
Confidence 3689999999999999999999999 8999999999999999988754432 21 11223433322378999988888
Q ss_pred HH
Q 017000 275 VS 276 (379)
Q Consensus 275 ~~ 276 (379)
++
T Consensus 475 ~~ 476 (621)
T PRK03562 475 PQ 476 (621)
T ss_pred HH
Confidence 54
No 445
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.22 E-value=0.61 Score=38.27 Aligned_cols=97 Identities=24% Similarity=0.303 Sum_probs=63.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC----CchHHHHHHHhcCC-CccEE
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDYS 268 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~----~~~~~~~i~~~~~~-~~d~v 268 (379)
..+|+|.|. |++|-+-++..++.++ -|..++-++.. +..+..+++-++. .....+++.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe-----~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENE-----QADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccc-----cccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 358999988 9999999999999999 88888766542 1223344443331 12233334444455 99999
Q ss_pred EEcCCCH------------------------H--HHHHHHHHhccCCceEEEEccC
Q 017000 269 FECIGNV------------------------S--VMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 269 id~~g~~------------------------~--~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
|..+|+- + ....+...|+++ |-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence 9877651 0 123445568896 888777653
No 446
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.21 E-value=0.39 Score=43.03 Aligned_cols=99 Identities=14% Similarity=0.238 Sum_probs=63.7
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCc-eEeCCCCCCchHHHHHHHhcCCCcc
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 266 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~-~v~~~~~~~~~~~~~i~~~~~~~~d 266 (379)
+.....++++||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.... .++..+- .++ ....+.+|
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~--~~~-----~~~~~~fD 105 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI--ESL-----PLATATFD 105 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc--ccC-----cCCCCcEE
Confidence 333344678999999864 665555554 576 899999999998888875432 2221111 110 11223799
Q ss_pred EEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017000 267 YSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 267 ~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
+|+.... ....+..+.+.|+++ |.++....
T Consensus 106 ~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 106 LAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 9986432 135688899999997 99886643
No 447
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.20 E-value=0.32 Score=44.65 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=65.4
Q ss_pred ccccccchhhcchhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEe-CChhhHHHHHhcCCceEeCCCCC
Q 017000 173 CLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKNFGVTEFVNPKDH 249 (379)
Q Consensus 173 a~l~~~~~ta~~al~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~~~lg~~~v~~~~~~ 249 (379)
..+||+....+. +++..++ -.|++|+|+|- +.+|.-.+.++...|+ .|++.. ++..
T Consensus 136 ~~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~------------------- 194 (296)
T PRK14188 136 ALVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD------------------- 194 (296)
T ss_pred CCcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC-------------------
Confidence 345655444444 3444443 46999999995 9999999999999999 888873 3321
Q ss_pred CchHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 250 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+.+.+ ...|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 ---l~e~~-----~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 195 ---LPAVC-----RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred ---HHHHH-----hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 11111 14799999999988776655 8886 888888874
No 448
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.20 E-value=0.63 Score=40.90 Aligned_cols=34 Identities=32% Similarity=0.465 Sum_probs=30.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~ 227 (379)
+...|+|+|.|+||-+++..+-..|..++..++-
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~ 62 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDM 62 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEec
Confidence 4578999999999999999999999988888864
No 449
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.19 E-value=0.29 Score=45.54 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhh
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|++|||+|+ |.+|..++..+...|+ +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4789999988 9999999998888899 78877676554
No 450
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.18 E-value=0.21 Score=39.65 Aligned_cols=79 Identities=22% Similarity=0.383 Sum_probs=48.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEe-CChhhHHHHHh-cCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~~~-lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
.-+|-|+|+|-+|..+...++..|. .|..+- ++.++.+.+.. ++...+.+..+ .. ..+|++|-++
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav 76 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV 76 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence 3578899999999999999999999 788874 45555565554 34333332221 11 2589999998
Q ss_pred CCHHHHHHHHHHhcc
Q 017000 273 GNVSVMRAALECCHK 287 (379)
Q Consensus 273 g~~~~~~~~~~~l~~ 287 (379)
.. +.+......|..
T Consensus 77 pD-daI~~va~~La~ 90 (127)
T PF10727_consen 77 PD-DAIAEVAEQLAQ 90 (127)
T ss_dssp -C-CHHHHHHHHHHC
T ss_pred ch-HHHHHHHHHHHH
Confidence 88 457777777765
No 451
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.18 E-value=0.055 Score=28.81 Aligned_cols=22 Identities=27% Similarity=0.303 Sum_probs=16.1
Q ss_pred ceeeeeecCCCCeEEEEeeCCCC
Q 017000 10 CKAAVAWEPNKPLVIEDVQVAPP 32 (379)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~p~~ 32 (379)
|||+++.++++ +.++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999999 99999999875
No 452
>PRK04266 fibrillarin; Provisional
Probab=94.16 E-value=0.85 Score=40.25 Aligned_cols=102 Identities=13% Similarity=0.158 Sum_probs=60.7
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCC
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~ 263 (379)
+...+++|++||=.|+| .|..+..+++..+..+|++++.+++.++.+.+ ...-..+..+. .+. .....+ .+
T Consensus 66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~--~~~-~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA--RKP-ERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC--CCc-chhhhc-cc
Confidence 44678999999988874 24455666776653489999999976664432 21112221111 110 000111 13
Q ss_pred CccEEEEcCCCHH----HHHHHHHHhccCCceEEEE
Q 017000 264 GVDYSFECIGNVS----VMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 264 ~~d~vid~~g~~~----~~~~~~~~l~~~~G~iv~~ 295 (379)
.+|+++.-...+. ++..+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999995444322 367888899997 998874
No 453
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.14 E-value=0.31 Score=44.73 Aligned_cols=95 Identities=18% Similarity=0.195 Sum_probs=66.5
Q ss_pred ccccccchhhcchhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCC
Q 017000 173 CLLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (379)
Q Consensus 173 a~l~~~~~ta~~al~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~ 250 (379)
..+||+....+. +++..++ -.|++|.|+|. +.+|.-.+.++...|+ +|++..+..+
T Consensus 137 ~~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------- 194 (301)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC--------------------
Confidence 345665444444 3444444 46999999999 5999999999999999 8888843322
Q ss_pred chHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 251 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
+..+.++ .+|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1111111 3799999999988777655 8886 888888854
No 454
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.51 Score=42.79 Aligned_cols=79 Identities=18% Similarity=0.139 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~ 263 (379)
+..++||+|+ |.+|..++..+...|+ +|+++.++.++.+.+ +..+... ++ |..+ ...+.+.+.+.. .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999988 9999999988888899 888887776654322 2234322 21 2222 123333333321 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998875
No 455
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.09 E-value=0.53 Score=42.56 Aligned_cols=101 Identities=16% Similarity=0.203 Sum_probs=65.1
Q ss_pred hccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHhcC-------Cc--eEeCCCCCCchHHHHH
Q 017000 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFG-------VT--EFVNPKDHDKPIQQVL 257 (379)
Q Consensus 188 ~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~lg-------~~--~v~~~~~~~~~~~~~i 257 (379)
+...+.++++||-+|+| .|..+..+++..+. .+|++++.+++-++.+++.. .+ .++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcG-tG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~--~~l---- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCG-SGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA--TDL---- 139 (261)
T ss_pred HHhCCCCCCEEEEECCc-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc--ccC----
Confidence 34467789999999885 35567778877653 38999999998887775421 11 1121111 110
Q ss_pred HHhcCCCccEEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017000 258 VDLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 258 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+.++.||.|+-..+ ...++.++.+.|+|+ |+++.+..
T Consensus 140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~ 183 (261)
T PLN02233 140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDF 183 (261)
T ss_pred -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEEC
Confidence 122236999875322 135689999999997 99987754
No 456
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.07 E-value=0.52 Score=43.99 Aligned_cols=99 Identities=19% Similarity=0.307 Sum_probs=61.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcC----CCeEEEEeC--ChhhHHHHHhcCCce--------------EeCCCCCCchHH--
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAG----ASRVIGIDI--DPKKFDRAKNFGVTE--------------FVNPKDHDKPIQ-- 254 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g----~~~vi~v~~--~~~~~~~~~~lg~~~--------------v~~~~~~~~~~~-- 254 (379)
+|.|+|.|.+|..+++.+...+ . .|+++.. +.+.+.++.++...+ +++.+. -.+.
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~--i~v~~~ 77 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDC--IRVLHS 77 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeE--EEEEEc
Confidence 4789999999999999988764 5 6666643 334444554443211 111110 0000
Q ss_pred HHHHHhc-CC-CccEEEEcCCCHHHHHHHHHHhccCCceEEEEccCC
Q 017000 255 QVLVDLT-DG-GVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAA 299 (379)
Q Consensus 255 ~~i~~~~-~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~ 299 (379)
....+.. .. ++|+||+|+|.......+...+..+ ++.|.++.+.
T Consensus 78 ~~p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP~ 123 (325)
T TIGR01532 78 PTPEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHPG 123 (325)
T ss_pred CChhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCCC
Confidence 0111222 22 8999999999977778888888886 8999888653
No 457
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.05 E-value=0.31 Score=43.80 Aligned_cols=78 Identities=12% Similarity=0.200 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEe-CChhhHHHH-Hh----cCCce-E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KN----FGVTE-F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~-~~----lg~~~-v--~~~~~~~~~~~~~i~~~~-- 261 (379)
+++++||+|+ +++|...+..+...|+ +|+.+. +++++.+.+ ++ .+... . .|..+ ..+..+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5789999988 9999999999989999 777764 344443322 11 23321 2 23332 123333333322
Q ss_pred CCCccEEEEcCC
Q 017000 262 DGGVDYSFECIG 273 (379)
Q Consensus 262 ~~~~d~vid~~g 273 (379)
.+.+|++++++|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247999999875
No 458
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.05 E-value=0.24 Score=51.22 Aligned_cols=79 Identities=24% Similarity=0.394 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH-h----cCCce--E--eCCCCCCchHHHHHHHhc--
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE--F--VNPKDHDKPIQQVLVDLT-- 261 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~-~----lg~~~--v--~~~~~~~~~~~~~i~~~~-- 261 (379)
.+++|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+. + .+... . .|..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4789999988 9999999998888999 8999988877654432 1 23211 1 23222 123333333321
Q ss_pred CCCccEEEEcCCC
Q 017000 262 DGGVDYSFECIGN 274 (379)
Q Consensus 262 ~~~~d~vid~~g~ 274 (379)
.+++|++|+++|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
No 459
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.02 E-value=0.31 Score=43.07 Aligned_cols=78 Identities=22% Similarity=0.258 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC-ChhhHHHH----HhcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~----~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
+.++|||+|+ |.+|..++..+...|+ +|+++.+ ..+..+.+ ...+... ++ |..+ ...+.+.+.+.. .
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence 3578999988 9999999999999999 6555444 33333222 2223221 22 2222 123333333321 1
Q ss_pred CCccEEEEcCC
Q 017000 263 GGVDYSFECIG 273 (379)
Q Consensus 263 ~~~d~vid~~g 273 (379)
+++|.||.++|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37999999887
No 460
>PLN02928 oxidoreductase family protein
Probab=94.01 E-value=0.37 Score=45.49 Aligned_cols=36 Identities=19% Similarity=0.396 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~ 229 (379)
-.|++|.|+|.|.+|..+++.++.+|+ +|++.+++.
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 358999999999999999999999999 999998763
No 461
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.01 E-value=0.29 Score=43.74 Aligned_cols=77 Identities=22% Similarity=0.280 Sum_probs=46.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh-hH----HHHHhcCCce-E--eCCCCCCchHHHHHHHhcC--CC
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF----DRAKNFGVTE-F--VNPKDHDKPIQQVLVDLTD--GG 264 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~-~~----~~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~~--~~ 264 (379)
+++||+|+ |.+|..++..+...|+ +|+.+++... +. +.+++.+... + .|..+ ..++.+.+.+... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57899988 9999999998888999 7888876432 21 1222233321 2 23322 2333333333322 36
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 9999998874
No 462
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.01 E-value=0.6 Score=42.91 Aligned_cols=93 Identities=22% Similarity=0.277 Sum_probs=54.5
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEE-EeCChh--hHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEc
Q 017000 196 SIVAVFGLGTVGLA-VAEGAKAAGASRVIG-IDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (379)
Q Consensus 196 ~~VlI~Gag~vG~~-a~~la~~~g~~~vi~-v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~ 271 (379)
-+|.|+|.|.+|.. +..+.+.-+. .+.+ ++.+++ .+.+++++|....+ .++.+.+.......+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 47899999999987 4444443456 5554 445544 34677888865322 123333322111369999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017000 272 IGNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 272 ~g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++.......+..++.. |..+.--.
T Consensus 78 T~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 78 TSAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CCHHHHHHHHHHHHHc--CCeEEECC
Confidence 9985545555554444 55554433
No 463
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.96 E-value=0.74 Score=42.41 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=55.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCC--CchHHHHHHHhcCCCccEEEEcCCC
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN 274 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~ 274 (379)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|... +..+. .........+. ..+|+||-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 68999999999998888888898 8999988777777776656421 10000 00000001111 368999998876
Q ss_pred HHHHHHHHHHh----ccCCceEEEE
Q 017000 275 VSVMRAALECC----HKGWGTSVIV 295 (379)
Q Consensus 275 ~~~~~~~~~~l----~~~~G~iv~~ 295 (379)
.. +..++..+ .++ ..++.+
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEe
Confidence 33 34444443 342 456555
No 464
>PLN00016 RNA-binding protein; Provisional
Probab=93.94 E-value=0.57 Score=44.82 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=58.9
Q ss_pred CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHH-----------HHhcCCceEeCCCCCCchHHHHHH
Q 017000 195 GSIVAVF----GL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-----------AKNFGVTEFVNPKDHDKPIQQVLV 258 (379)
Q Consensus 195 g~~VlI~----Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~-----------~~~lg~~~v~~~~~~~~~~~~~i~ 258 (379)
..+|||+ |+ |-+|..++..+...|. +|+++.+++++... +...|...+. . +..+ +.
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-~-----D~~d-~~ 123 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-G-----DPAD-VK 123 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-e-----cHHH-HH
Confidence 4689999 98 9999999999888998 89999887654221 1223433222 1 2222 22
Q ss_pred HhcCC-CccEEEEcCCCH-HHHHHHHHHhccC-CceEEEEcc
Q 017000 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKG-WGTSVIVGV 297 (379)
Q Consensus 259 ~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~-~G~iv~~g~ 297 (379)
+.... ++|+||++.+.. .....+++.+... -.++|.++.
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 22233 799999987652 2244555655542 136887664
No 465
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=93.93 E-value=0.53 Score=43.00 Aligned_cols=89 Identities=22% Similarity=0.365 Sum_probs=55.6
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEE-EeCChhh--HHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 197 IVAVFGLGTVGLAV-AEGAKAAGASRVIG-IDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 197 ~VlI~Gag~vG~~a-~~la~~~g~~~vi~-v~~~~~~--~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
+|.|+|+|.+|... ..+.+..+. .+.+ ++.++++ +++++++|....+. ++...+. ...+|+|++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhc---CCCCCEEEECC
Confidence 68899999999854 555555566 5555 4445543 56778888764432 1222222 12699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017000 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
++......+..++.. |+.|..-.
T Consensus 73 p~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEECC
Confidence 996655666665555 56554433
No 466
>PRK05855 short chain dehydrogenase; Validated
Probab=93.90 E-value=0.26 Score=49.79 Aligned_cols=79 Identities=24% Similarity=0.301 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce-E--eCCCCCCchHHHHHHHhc--CC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~-v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
.+.++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. +.|... + .|..+ .....+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999988 9999999988889999 7999989877655432 334322 1 23332 122333333322 23
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.+|++++++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 69999999875
No 467
>PRK06849 hypothetical protein; Provisional
Probab=93.88 E-value=0.52 Score=45.30 Aligned_cols=92 Identities=21% Similarity=0.174 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeC---CCCCCchHHHHHHHhcCC-CccEE
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN---PKDHDKPIQQVLVDLTDG-GVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~---~~~~~~~~~~~i~~~~~~-~~d~v 268 (379)
...+|||+|+ .+.|+..+..++..|. +|+++++++....... ..++..+. +......+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s-~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFS-RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHH-HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3589999998 6689999999999999 8999988765433221 22333221 222224567777776555 89999
Q ss_pred EEcCCCHHHHHHHHHHhcc
Q 017000 269 FECIGNVSVMRAALECCHK 287 (379)
Q Consensus 269 id~~g~~~~~~~~~~~l~~ 287 (379)
|-+......+......+.+
T Consensus 81 IP~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSA 99 (389)
T ss_pred EECChHHHhHHhhhhhhcC
Confidence 9776543223333344555
No 468
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.88 E-value=1.1 Score=38.78 Aligned_cols=95 Identities=23% Similarity=0.301 Sum_probs=62.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHHH-hcCCCcc
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD-LTDGGVD 266 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~-~~~~~~d 266 (379)
++.+||-+|+| .|..+..+++.....+|++++.+++..+.+++ .+... ++. .+..+.+.. +.++.+|
T Consensus 40 ~~~~VLDiGcG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~-----~d~~~~l~~~~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC-----GDAVEVLLDMFPDGSLD 113 (202)
T ss_pred CCCeEEEEccC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe-----cCHHHHHHHHcCccccc
Confidence 57888889886 37777778877654489999999988877764 23221 221 222222322 2233789
Q ss_pred EEEEcCC--------------CHHHHHHHHHHhccCCceEEEE
Q 017000 267 YSFECIG--------------NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 267 ~vid~~g--------------~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.|+-... ...+++.+.+.|+++ |.++..
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~ 155 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFA 155 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEE
Confidence 8874322 245789999999997 998865
No 469
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.88 E-value=0.2 Score=43.89 Aligned_cols=47 Identities=32% Similarity=0.379 Sum_probs=36.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCCh----------hhHHHHHhcC
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKNFG 239 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~----------~~~~~~~~lg 239 (379)
-.|.+|+|.|.|.+|..+++++...|++.|.+.+.+. +..+..++.+
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 3689999999999999999999999994555566665 5666665544
No 470
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.87 E-value=0.59 Score=42.94 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=37.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999988888888898 89999999999888887765
No 471
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.87 E-value=0.48 Score=36.64 Aligned_cols=96 Identities=27% Similarity=0.363 Sum_probs=57.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHh----cCCceEeCCCCCCchHHHHHHHhcCCCccEEEE
Q 017000 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (379)
Q Consensus 195 g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~----lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid 270 (379)
|.+||-.|+| .|..++.+++.. ..++++++.+++..+.++. .+.+.-+... ..++.+.......+.+|+|+-
T Consensus 1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~--~~D~~~~~~~~~~~~~D~Iv~ 76 (117)
T PF13659_consen 1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVI--VGDARDLPEPLPDGKFDLIVT 76 (117)
T ss_dssp TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEE--ESHHHHHHHTCTTT-EEEEEE
T ss_pred CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEE--ECchhhchhhccCceeEEEEE
Confidence 5678877653 344444445444 4499999999998888774 2221001111 134544443444458999884
Q ss_pred cC--CC------------HHHHHHHHHHhccCCceEEEE
Q 017000 271 CI--GN------------VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 271 ~~--g~------------~~~~~~~~~~l~~~~G~iv~~ 295 (379)
.- +. ..++..+.+.|+++ |.++.+
T Consensus 77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 21 11 34588999999997 998865
No 472
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.85 E-value=0.45 Score=44.64 Aligned_cols=99 Identities=18% Similarity=0.188 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
.++.+||=+|+|. |..+..+++..+..++++++.+++-.+.+++.....-+.... .+..+ + .+..+.+|+|+.+.
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e~-l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAED-L-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHHh-C-CCCCCceeEEEEcC
Confidence 4678999998865 777778888775458999999988777776532111000000 11110 0 11223799988642
Q ss_pred C------CHHHHHHHHHHhccCCceEEEEcc
Q 017000 273 G------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
. ....++++.+.|+++ |+++.++.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 1 134678999999997 99987754
No 473
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.84 E-value=0.34 Score=41.07 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=43.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh-------hhHHHHHhcCCceEe---CCCCCCchHHHHHHHhcC--C
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDLTD--G 263 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-------~~~~~~~~lg~~~v~---~~~~~~~~~~~~i~~~~~--~ 263 (379)
++||+|+ |++|+..++.+...|..+++.+.++. +..+.+++.|....+ |..+ .+.+.+.+..... +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d-~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTD-PEAVAAALAQLRQRFG 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTS-HHHHHHHHHTSHTTSS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccC-HHHHHHHHHHHHhccC
Confidence 6899976 99999999999999888999998882 123444555654322 1111 1333333433332 2
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
.++.||.+.|.
T Consensus 81 ~i~gVih~ag~ 91 (181)
T PF08659_consen 81 PIDGVIHAAGV 91 (181)
T ss_dssp -EEEEEE----
T ss_pred Ccceeeeeeee
Confidence 56777777665
No 474
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.83 E-value=0.29 Score=44.00 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=48.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCCh--hhHH-HHHhcCCc-eE--eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD-RAKNFGVT-EF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~~--~~~~-~~~~lg~~-~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.++++||+|+ +++|.+.++.+...|+ +|+.++++. +..+ ...+++.. +. .|..+ .++..+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4689999985 7999999988888999 888887553 3323 33334321 11 23322 122333333322 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999998764
No 475
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.80 E-value=0.45 Score=42.33 Aligned_cols=78 Identities=17% Similarity=0.141 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEe-CChhhHHHH-HhcCCce-Ee--CCCCCCchHHHHHHH---hcCCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVD---LTDGG 264 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~-~~~~~~~~~-~~lg~~~-v~--~~~~~~~~~~~~i~~---~~~~~ 264 (379)
.++++||+|+ |.+|..++..+...|+ +|+.+. +++++.+.+ .+++.+. ++ |..+ ..++.+.+.+ ....+
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~ 81 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKP 81 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3578999988 9999999998888999 676653 344444333 3343221 22 2222 1223333333 22224
Q ss_pred ccEEEEcCC
Q 017000 265 VDYSFECIG 273 (379)
Q Consensus 265 ~d~vid~~g 273 (379)
+|++|+++|
T Consensus 82 id~li~~ag 90 (253)
T PRK08642 82 ITTVVNNAL 90 (253)
T ss_pred CeEEEECCC
Confidence 999999875
No 476
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.76 E-value=0.39 Score=43.11 Aligned_cols=79 Identities=16% Similarity=0.131 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCCh-hhHH----HHHhcCCce-E--eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~-~~~~----~~~~lg~~~-v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
+++++||+|+ |.+|...++.+...|+ +|+.+.++. ++.+ .++..+... + .|..+ .....+.+.... .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5789999988 9999999999999999 676665533 3222 222334322 1 23333 122323333221 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++++++|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 477
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.76 E-value=0.77 Score=42.67 Aligned_cols=101 Identities=15% Similarity=0.113 Sum_probs=61.7
Q ss_pred cchhhhccCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHH---HHHhc-CCc---eEeCCCCCCchHHH
Q 017000 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD---RAKNF-GVT---EFVNPKDHDKPIQQ 255 (379)
Q Consensus 183 ~~al~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~---~~~~l-g~~---~v~~~~~~~~~~~~ 255 (379)
|..+.......+|++||=+|+|. |..+..++. .|+..|++++.++.-.. .++++ +.. ++... +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~-----~--- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL-----G--- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC-----C---
Confidence 33344555667889999999864 666666654 47668999998885433 22222 111 11111 1
Q ss_pred HHHHhcC-CCccEEEEcC-----CC-HHHHHHHHHHhccCCceEEEE
Q 017000 256 VLVDLTD-GGVDYSFECI-----GN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 256 ~i~~~~~-~~~d~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
+..+.. ..||+|+-.. .. ...+.++.+.|+++ |++++-
T Consensus 180 -ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 -IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred -HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 112222 2799998532 11 35789999999997 999864
No 478
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=93.76 E-value=0.42 Score=48.79 Aligned_cols=93 Identities=10% Similarity=0.078 Sum_probs=65.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCCCH
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 275 (379)
+.|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...++- +. .-.+.+++..-..+|.++-+.++.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Da---t~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DA---TQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eC---CCHHHHHhcCCccCCEEEEEeCCH
Confidence 579999999999999999999999 8999999999999999988754432 21 112234443223789999998885
Q ss_pred HHHHHH---HHHhccCCceEEE
Q 017000 276 SVMRAA---LECCHKGWGTSVI 294 (379)
Q Consensus 276 ~~~~~~---~~~l~~~~G~iv~ 294 (379)
+.-..+ .+...|. -+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 432233 3344453 55553
No 479
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=93.74 E-value=0.82 Score=36.36 Aligned_cols=86 Identities=17% Similarity=0.304 Sum_probs=54.0
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEeCChh--h-HHHHHhcCCceEeCCCCCCchHHHHHH-------------
Q 017000 198 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPK--K-FDRAKNFGVTEFVNPKDHDKPIQQVLV------------- 258 (379)
Q Consensus 198 VlI~Ga-g~vG~~a~~la~~~g--~~~vi~v~~~~~--~-~~~~~~lg~~~v~~~~~~~~~~~~~i~------------- 258 (379)
|.|+|+ |.+|..++.+.+... + +|++...... + .+.++++.+..++..++ ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 578899 999999999999987 5 7777654432 2 45667788888766554 2222222
Q ss_pred -------HhcC-CCccEEEEcCCCHHHHHHHHHHhcc
Q 017000 259 -------DLTD-GGVDYSFECIGNVSVMRAALECCHK 287 (379)
Q Consensus 259 -------~~~~-~~~d~vid~~g~~~~~~~~~~~l~~ 287 (379)
+... ..+|+|+.++.+..-+.-.+..+..
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~ 113 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA 113 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC
Confidence 2222 2678888776665666667777776
No 480
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.74 E-value=0.39 Score=43.74 Aligned_cols=94 Identities=20% Similarity=0.238 Sum_probs=64.8
Q ss_pred cccccchhhcchhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCc
Q 017000 174 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 174 ~l~~~~~ta~~al~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 251 (379)
..||+....+. +++..++ -.|++|+|+|. ..+|.-++.++...|+ +|+.+.+.. .
T Consensus 137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~t---------------------~ 193 (285)
T PRK14189 137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSKT---------------------R 193 (285)
T ss_pred CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCCC---------------------C
Confidence 45655444433 3444443 36999999998 5569999999999999 788762211 2
Q ss_pred hHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 252 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.++ .+|+|+-++|.+.++.. ..++++ ..++.+|..
T Consensus 194 ~l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin 232 (285)
T PRK14189 194 DLAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN 232 (285)
T ss_pred CHHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence 2222222 38999999999876654 778996 889999864
No 481
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.72 E-value=0.42 Score=47.33 Aligned_cols=69 Identities=28% Similarity=0.293 Sum_probs=48.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChh-----hHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~-----~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~v 268 (379)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|......... . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~--~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP--T---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc--c---------ccCCCCEE
Confidence 46799999999999999999999999 7888875542 234566677754433221 1 01257888
Q ss_pred EEcCCC
Q 017000 269 FECIGN 274 (379)
Q Consensus 269 id~~g~ 274 (379)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 877665
No 482
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=93.70 E-value=0.65 Score=40.93 Aligned_cols=100 Identities=25% Similarity=0.311 Sum_probs=65.1
Q ss_pred ccCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHHHhcCCc-------eEeCCCCCCchHHHHHHHh
Q 017000 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVT-------EFVNPKDHDKPIQQVLVDL 260 (379)
Q Consensus 189 ~~~~~~g~~VlI~Gag~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~~~lg~~-------~v~~~~~~~~~~~~~i~~~ 260 (379)
.....++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-.. .++..+ +.+. ..
T Consensus 46 ~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d-----~~~~--~~ 117 (239)
T PRK00216 46 WLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD-----AEAL--PF 117 (239)
T ss_pred HhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc-----cccC--CC
Confidence 34456788999999976 788888888775 23999999999887777664211 111111 1110 11
Q ss_pred cCCCccEEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017000 261 TDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 261 ~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
..+.+|+|+-..+ ....+..+...|+++ |+++.+..
T Consensus 118 ~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~ 159 (239)
T PRK00216 118 PDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF 159 (239)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence 2236898874321 245678889999997 99887754
No 483
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.68 E-value=0.75 Score=41.37 Aligned_cols=93 Identities=24% Similarity=0.274 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc----CCc---eEeCCCCCCchHHHHHHHhcCCCc
Q 017000 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT---EFVNPKDHDKPIQQVLVDLTDGGV 265 (379)
Q Consensus 193 ~~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l----g~~---~v~~~~~~~~~~~~~i~~~~~~~~ 265 (379)
.++.+||-+|+| .|..+..+++. |. +|++++.+++..+.+++. |.. .++.. +..+ +.....+.+
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-----d~~~-l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-----AAQD-IAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-----CHHH-HhhhcCCCC
Confidence 456788888875 46777777774 77 899999999888777653 321 12211 1211 222223479
Q ss_pred cEEEEcC-----C-CHHHHHHHHHHhccCCceEEEE
Q 017000 266 DYSFECI-----G-NVSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 266 d~vid~~-----g-~~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+|+-.. . ....+..+.+.|+++ |.++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 9998432 1 235688999999997 998765
No 484
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.67 E-value=0.39 Score=43.02 Aligned_cols=79 Identities=14% Similarity=0.117 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC-ChhhHHHH-H---hcCCce-Ee--CCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-K---NFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~~~-~---~lg~~~-v~--~~~~~~~~~~~~i~~~~--~ 262 (379)
.+.++||+|+ |.+|..++..+...|+ +|+.+.+ +.++.+.+ . ..+... .+ |..+ .....+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999988888999 6766544 34433222 2 224322 12 3332 123333333321 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+++|++|+++|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 379999999874
No 485
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.65 E-value=0.41 Score=43.12 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=47.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEeCC---hhhHH-HHHhcCCceE--eCCCCCCchHHHHHHHhc--C
Q 017000 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID---PKKFD-RAKNFGVTEF--VNPKDHDKPIQQVLVDLT--D 262 (379)
Q Consensus 194 ~g~~VlI~Ga---g~vG~~a~~la~~~g~~~vi~v~~~---~~~~~-~~~~lg~~~v--~~~~~~~~~~~~~i~~~~--~ 262 (379)
.++++||+|+ +++|.++++.+...|+ +|+.+.+. +++.+ +.++++.... .|..+ .++..+.+.... .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4789999984 5899999988888999 78776443 23333 2233443322 23322 133333333332 2
Q ss_pred CCccEEEEcCCC
Q 017000 263 GGVDYSFECIGN 274 (379)
Q Consensus 263 ~~~d~vid~~g~ 274 (379)
+.+|++++++|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998763
No 486
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.64 E-value=0.45 Score=44.25 Aligned_cols=78 Identities=21% Similarity=0.206 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEeCChhhHHHH-HhcCC---c-eE--eCCCCCCchHHHHHHHhc--CC
Q 017000 195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGV---T-EF--VNPKDHDKPIQQVLVDLT--DG 263 (379)
Q Consensus 195 g~~VlI~Ga-g~vG~~a~~la~~~g-~~~vi~v~~~~~~~~~~-~~lg~---~-~v--~~~~~~~~~~~~~i~~~~--~~ 263 (379)
++++||+|+ +++|..++..+...| + +|+.+.+++++.+.+ +++.. . ++ .|..+ ..+....+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 578999988 999999888888889 7 888888887765433 33321 1 11 23332 122222333221 24
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
++|++|+++|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998763
No 487
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.64 E-value=0.58 Score=39.73 Aligned_cols=92 Identities=17% Similarity=0.193 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHH----hcCCce--EeCCCCCCchHHHHHHHhcCCCccE
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDY 267 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~----~lg~~~--v~~~~~~~~~~~~~i~~~~~~~~d~ 267 (379)
++++||=+|+| .|.+++.+++.....+|++++.+++..+.++ +.+.+. ++.. +..+ + ...+.+|+
T Consensus 42 ~~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~-----d~~~-~--~~~~~fD~ 112 (181)
T TIGR00138 42 DGKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG-----RAED-F--QHEEQFDV 112 (181)
T ss_pred CCCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec-----chhh-c--cccCCccE
Confidence 37899988874 3555556665554348999999988665554 345432 2221 1211 1 11237999
Q ss_pred EEEcC-CC-HHHHHHHHHHhccCCceEEEE
Q 017000 268 SFECI-GN-VSVMRAALECCHKGWGTSVIV 295 (379)
Q Consensus 268 vid~~-g~-~~~~~~~~~~l~~~~G~iv~~ 295 (379)
|+-.. .. +..++.+.+.|+++ |+++..
T Consensus 113 I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 113 ITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 88532 22 35567788889997 998865
No 488
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.63 E-value=0.42 Score=42.14 Aligned_cols=77 Identities=17% Similarity=0.191 Sum_probs=45.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeC-ChhhHH-HHHh---cCCce-E--eCCCCCCchHHHHHHHhc--CCC
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~-~~~~~~-~~~~---lg~~~-v--~~~~~~~~~~~~~i~~~~--~~~ 264 (379)
+++||+|+ |.+|..++..+...|+ +|+++.+ ++++.+ ...+ .+... + .|..+ ...+.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 46899988 9999999999999999 7777766 444332 2222 22211 1 22222 122333333322 236
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|+||++.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 489
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=93.62 E-value=0.44 Score=44.19 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=56.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhc-CCceEeCCCCCCchHHH-HHHHhcCCCccEEEEcCC
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQ-VLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~l-g~~~v~~~~~~~~~~~~-~i~~~~~~~~d~vid~~g 273 (379)
.+|+|+|+|++|.+.+-.+...|. .|..+.+.+++.+..++- |.. +...... ..+.- .......+.+|+||-|+=
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~-~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQA-SLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcc-eeeccCCCCcccccccCEEEEECC
Confidence 469999999999887777777788 788888887777766643 432 2111110 00000 000001136899998866
Q ss_pred CHH---HHHHHHHHhccCCceEEEEc
Q 017000 274 NVS---VMRAALECCHKGWGTSVIVG 296 (379)
Q Consensus 274 ~~~---~~~~~~~~l~~~~G~iv~~g 296 (379)
..+ .+..+...+.++ ..++.+-
T Consensus 80 ~~~~~~al~~l~~~l~~~-t~vv~lQ 104 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPG-AELLLLQ 104 (305)
T ss_pred HHhHHHHHHHHHhhCCCC-CEEEEEe
Confidence 633 334444445664 6666553
No 490
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.61 E-value=0.78 Score=42.24 Aligned_cols=44 Identities=23% Similarity=0.363 Sum_probs=36.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCC
Q 017000 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (379)
Q Consensus 196 ~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~ 240 (379)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 368899999999988777777888 89999999988887777665
No 491
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.61 E-value=0.82 Score=42.87 Aligned_cols=37 Identities=32% Similarity=0.441 Sum_probs=33.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCChhh
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~ 231 (379)
.|.+|.|+|.|.+|...+..++.+|. +|++.+++++.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence 57899999999999999999999999 89999887654
No 492
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.60 E-value=0.4 Score=46.13 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEeCC
Q 017000 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (379)
Q Consensus 194 ~g~~VlI~Gag~vG~~a~~la~~~g~~~vi~v~~~ 228 (379)
...+|||+|+|++|..++..+..+|..++..+|.+
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 45799999999999999999999999899988754
No 493
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.57 E-value=0.44 Score=43.33 Aligned_cols=94 Identities=18% Similarity=0.196 Sum_probs=65.3
Q ss_pred cccccchhhcchhhhccCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCceEeCCCCCCc
Q 017000 174 LLGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (379)
Q Consensus 174 ~l~~~~~ta~~al~~~~~~-~~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~v~~~~~~~~ 251 (379)
..||+....+. +++..++ -.|++|+|+|- ..+|.-+++++...|+ +|+.+.+.. .
T Consensus 138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------~ 194 (285)
T PRK10792 138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------K 194 (285)
T ss_pred CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC---------------------C
Confidence 45655444444 3444444 36999999998 5599999999999999 888774321 1
Q ss_pred hHHHHHHHhcCCCccEEEEcCCCHHHHHHHHHHhccCCceEEEEccC
Q 017000 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVA 298 (379)
Q Consensus 252 ~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~ 298 (379)
++.+.++ .+|+++.++|.+.++.. ..++++ ..++.+|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 48999999999886654 778886 888888853
No 494
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.53 E-value=0.51 Score=43.04 Aligned_cols=96 Identities=8% Similarity=0.018 Sum_probs=58.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce-EeCCCCCCchHHHHHHHhcC-CC-ccEEEEcC
Q 017000 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTD-GG-VDYSFECI 272 (379)
Q Consensus 197 ~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~-v~~~~~~~~~~~~~i~~~~~-~~-~d~vid~~ 272 (379)
+|||+|+ |.+|..++..+...|. +|.++.+++++.. ..+... ..|..+ ...+.+.++.... .+ +|.++.+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEEeC
Confidence 4899998 9999999999988998 7899888876542 223332 234433 2334333332211 25 89998776
Q ss_pred CCH----HHHHHHHHHhccC-CceEEEEcc
Q 017000 273 GNV----SVMRAALECCHKG-WGTSVIVGV 297 (379)
Q Consensus 273 g~~----~~~~~~~~~l~~~-~G~iv~~g~ 297 (379)
+.. ......++.++.. -.++|.++.
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 631 2234445555443 136777754
No 495
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.53 E-value=0.46 Score=41.96 Aligned_cols=70 Identities=24% Similarity=0.324 Sum_probs=48.6
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChh--hHHHHHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcCC
Q 017000 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (379)
Q Consensus 198 VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~--~~~~~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 273 (379)
|+|+|+ |.+|...++.+...+. +|.++.++.. +.+.+++.|+..+ ..+- .+. +.+.+... |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~--~~~-~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY--DDP-ESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T--T-H-HHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc--CCH-HHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 7888878753 4566677888644 2221 111 22333222 7999998888
No 496
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.50 E-value=0.36 Score=42.90 Aligned_cols=77 Identities=19% Similarity=0.155 Sum_probs=45.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-eCChhhHHH----HHhcCCce-Ee--CCCCCCchHHHHHHHhc--CCC
Q 017000 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (379)
Q Consensus 196 ~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v-~~~~~~~~~----~~~lg~~~-v~--~~~~~~~~~~~~i~~~~--~~~ 264 (379)
++|||+|+ |.+|..+++.+...|+ +|+.+ .+++++.+. ++..+... .+ |..+ ..++.+.+.+.. .++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN-EADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCC-HHHHHHHHHHHHHhcCC
Confidence 57999988 9999999999888999 66654 445444332 22233222 12 2222 133333333322 237
Q ss_pred ccEEEEcCCC
Q 017000 265 VDYSFECIGN 274 (379)
Q Consensus 265 ~d~vid~~g~ 274 (379)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999998873
No 497
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.49 E-value=0.32 Score=42.92 Aligned_cols=102 Identities=21% Similarity=0.317 Sum_probs=64.4
Q ss_pred hhccCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEeCChhhHHHHHh----cCCce--EeCCCCCCchHHHHHHH
Q 017000 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (379)
Q Consensus 187 ~~~~~~~~g~~VlI~Gag~vG~~a~~la~~~g~-~~vi~v~~~~~~~~~~~~----lg~~~--v~~~~~~~~~~~~~i~~ 259 (379)
.....++++++||=+|+| .|..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+. .++ .
T Consensus 38 l~~l~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~~-----~ 109 (231)
T TIGR02752 38 MKRMNVQAGTSALDVCCG-TADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA--MEL-----P 109 (231)
T ss_pred HHhcCCCCCCEEEEeCCC-cCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech--hcC-----C
Confidence 345567889999999885 35566777777642 389999999887766653 22221 121111 000 1
Q ss_pred hcCCCccEEEEcCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017000 260 LTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 260 ~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
...+.+|+|+-... ....++.+.+.|+++ |+++.+..
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 110 FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 22237999874321 134578889999997 99987643
No 498
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=93.48 E-value=1.6 Score=33.84 Aligned_cols=88 Identities=22% Similarity=0.319 Sum_probs=58.9
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEE-EEeCChhhHHH-HHhcCCceEeCCCCCCchHHHHHHHhcCCCccEEEEcC
Q 017000 197 IVAVFGLGTVGLAVAEGAKAA--GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (379)
Q Consensus 197 ~VlI~Gag~vG~~a~~la~~~--g~~~vi-~v~~~~~~~~~-~~~lg~~~v~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 272 (379)
+|.|+|+|..|..-..-++.. +. +++ +++.++++.+. .+++|.. .+ .++.+.+... .+|+|+.++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~~---~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLADE---DVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHHT---TESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHhh---cCCEEEEec
Confidence 688999999998887666655 34 555 45667766665 4567776 33 2233333332 699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcc
Q 017000 273 GNVSVMRAALECCHKGWGTSVIVGV 297 (379)
Q Consensus 273 g~~~~~~~~~~~l~~~~G~iv~~g~ 297 (379)
.+..-...+..++.. |.-|++..
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred CCcchHHHHHHHHHc--CCEEEEEc
Confidence 887666777777776 56666644
No 499
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=93.46 E-value=0.32 Score=35.66 Aligned_cols=84 Identities=27% Similarity=0.368 Sum_probs=53.5
Q ss_pred EcCChHHHHHHHHHHHcCCCeEEEEeCChhhHHHHHhcCCce---EeCCCCCCchHHHHHHHhcCCCccEEEEcCCC---
Q 017000 201 FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN--- 274 (379)
Q Consensus 201 ~Gag~vG~~a~~la~~~g~~~vi~v~~~~~~~~~~~~lg~~~---v~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~--- 274 (379)
+|+| .|..+..+++. +..++++++.+++..+.+++..... +...+. .++ ...++.+|+|+....-
T Consensus 3 iG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~--~~l-----~~~~~sfD~v~~~~~~~~~ 73 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQGDA--EDL-----PFPDNSFDVVFSNSVLHHL 73 (95)
T ss_dssp ET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEESBT--TSS-----SS-TT-EEEEEEESHGGGS
T ss_pred ecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchheeehH--HhC-----ccccccccccccccceeec
Confidence 4555 68888888888 4449999999999888888754432 222211 111 2223479999864221
Q ss_pred ---HHHHHHHHHHhccCCceEEE
Q 017000 275 ---VSVMRAALECCHKGWGTSVI 294 (379)
Q Consensus 275 ---~~~~~~~~~~l~~~~G~iv~ 294 (379)
...+.++.+.|+++ |+++.
T Consensus 74 ~~~~~~l~e~~rvLk~g-G~l~~ 95 (95)
T PF08241_consen 74 EDPEAALREIYRVLKPG-GRLVI 95 (95)
T ss_dssp SHHHHHHHHHHHHEEEE-EEEEE
T ss_pred cCHHHHHHHHHHHcCcC-eEEeC
Confidence 35689999999997 99873
No 500
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=93.42 E-value=0.55 Score=43.44 Aligned_cols=74 Identities=22% Similarity=0.326 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEeCChhh---HHHHHhcC-Cce---EeC--CCCCCchHHHHHHHhcCC
Q 017000 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK---FDRAKNFG-VTE---FVN--PKDHDKPIQQVLVDLTDG 263 (379)
Q Consensus 194 ~g~~VlI~Ga-g~vG~~a~~la~~~g~~~vi~v~~~~~~---~~~~~~lg-~~~---v~~--~~~~~~~~~~~i~~~~~~ 263 (379)
.+..|+|+|| |-+|...+..+..+|+ +|.++.++++. .+.++++. +++ ++. -.+ ...|.+.+ .
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d-~~sf~~ai-----~ 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD-EGSFDKAI-----D 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc-cchHHHHH-----h
Confidence 5789999999 9999999999999999 89999888765 33566654 221 121 111 12333332 2
Q ss_pred CccEEEEcCCC
Q 017000 264 GVDYSFECIGN 274 (379)
Q Consensus 264 ~~d~vid~~g~ 274 (379)
|.|.||.++..
T Consensus 78 gcdgVfH~Asp 88 (327)
T KOG1502|consen 78 GCDGVFHTASP 88 (327)
T ss_pred CCCEEEEeCcc
Confidence 68999998765
Done!