Query 017003
Match_columns 379
No_of_seqs 323 out of 1533
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:21:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017003.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017003hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ep6_A MCTP2 protein; beta san 99.8 3.6E-18 1.2E-22 141.8 11.9 109 256-366 5-132 (133)
2 1wfj_A Putative elicitor-respo 99.7 2.1E-17 7.3E-22 137.5 12.3 104 261-368 7-132 (136)
3 2dmh_A Myoferlin; beta-sandwic 99.7 4.3E-17 1.5E-21 136.4 14.1 104 261-366 4-133 (140)
4 3kwu_A MUNC13-1; calcium bindi 99.7 1.1E-16 3.9E-21 135.1 14.7 103 262-366 15-147 (148)
5 2fk9_A Protein kinase C, ETA t 99.7 1.5E-16 5E-21 135.8 12.1 79 261-341 26-114 (157)
6 1gmi_A Protein kinase C, epsil 99.7 1.5E-16 5.3E-21 132.5 11.8 96 262-365 4-132 (136)
7 3b7y_A E3 ubiquitin-protein li 99.7 2.9E-16 1E-20 133.3 12.8 104 260-364 16-151 (153)
8 1rlw_A Phospholipase A2, CALB 99.7 6.5E-16 2.2E-20 126.7 11.6 78 263-340 2-84 (126)
9 3pyc_A E3 ubiquitin-protein li 99.7 1.5E-15 5.3E-20 125.6 13.8 100 263-364 4-131 (132)
10 3m7f_B E3 ubiquitin-protein li 99.7 1.2E-15 4.1E-20 132.8 13.7 104 261-365 5-140 (176)
11 2z0u_A WW domain-containing pr 99.6 2.9E-16 9.8E-21 134.0 7.1 87 255-341 34-127 (155)
12 1a25_A CALB, protein kinase C 99.6 1E-15 3.6E-20 129.4 9.2 93 262-354 29-145 (149)
13 1v27_A Regulating synaptic mem 99.6 3.2E-16 1.1E-20 131.0 5.9 101 255-355 12-140 (141)
14 2nq3_A Itchy homolog E3 ubiqui 99.6 5.1E-15 1.7E-19 128.5 13.6 104 261-367 33-162 (173)
15 2b3r_A Phosphatidylinositol-4- 99.6 1.9E-15 6.4E-20 125.7 10.2 82 259-341 15-103 (134)
16 3fbk_A RGS3, RGP3, regulator o 99.6 2.4E-15 8.3E-20 127.8 10.8 100 253-354 16-143 (153)
17 1rsy_A Synaptotagmin I; calciu 99.6 1.8E-15 6.3E-20 128.4 9.9 88 254-341 32-123 (152)
18 3rdl_A Protein kinase C alpha 99.6 1.7E-15 5.6E-20 126.0 9.0 93 262-354 14-130 (137)
19 2bwq_A Regulating synaptic mem 99.6 1.8E-15 6.1E-20 124.5 9.0 86 255-340 9-101 (129)
20 3fdw_A Synaptotagmin-like prot 99.6 2.7E-15 9.4E-20 126.7 10.1 87 255-341 14-107 (148)
21 3f04_A Synaptotagmin-1; C2A, c 99.6 3.1E-15 1.1E-19 125.5 9.9 87 255-341 25-115 (143)
22 2d8k_A Synaptotagmin VII; exoc 99.6 2.3E-15 7.8E-20 126.1 8.1 87 255-341 17-108 (141)
23 1tjx_A Similar to synaptotagmi 99.6 1.9E-15 6.6E-20 129.2 7.8 87 255-341 16-108 (159)
24 1wfm_A Synaptotagmin XIII; C2 99.6 7.4E-15 2.5E-19 122.6 10.3 84 255-341 17-105 (138)
25 3n5a_A Synaptotagmin-7; calciu 99.6 8.9E-15 3E-19 121.6 10.0 87 255-341 7-99 (138)
26 2cm5_A Rabphilin-3A; protein t 99.6 1.3E-14 4.4E-19 125.0 10.8 87 255-341 28-120 (166)
27 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.1E-14 7.1E-19 134.2 13.1 111 255-365 10-146 (284)
28 1w15_A Synaptotagmin IV; metal 99.6 2.3E-14 7.7E-19 121.6 11.3 87 255-341 21-113 (153)
29 1rh8_A Piccolo protein; beta-s 99.5 3.1E-15 1.1E-19 125.3 5.1 79 263-341 17-111 (142)
30 1ugk_A Synaptotagmin IV, KIAA1 99.5 3E-14 1E-18 118.7 11.0 94 255-348 13-117 (138)
31 2dmg_A KIAA1228 protein; beta- 99.5 8.2E-15 2.8E-19 122.7 7.4 83 256-339 16-104 (142)
32 2chd_A Rabphilin-3A, exophilin 99.5 1.2E-14 4.2E-19 121.7 8.4 96 255-350 20-127 (142)
33 2q3x_A Regulating synaptic mem 99.5 2.5E-14 8.5E-19 123.9 9.2 88 262-350 28-141 (171)
34 3nsj_A Perforin-1; pore formin 99.5 3.3E-13 1.1E-17 136.4 18.2 142 196-341 310-470 (540)
35 1dqv_A Synaptotagmin III; beta 99.5 5.9E-14 2E-18 132.2 11.4 112 254-365 10-148 (296)
36 2enp_A B/K protein; C2 type 1, 99.5 1.2E-14 4E-19 122.5 5.3 87 255-341 17-114 (147)
37 3jzy_A Intersectin 2; C2 domai 99.5 3.8E-13 1.3E-17 135.9 14.9 102 261-367 384-509 (510)
38 2cjt_A UNC-13 homolog A, MUNC1 99.4 9.3E-13 3.2E-17 108.9 10.4 72 262-341 3-75 (131)
39 3l9b_A Otoferlin; C2-domain, b 99.4 5.8E-12 2E-16 103.9 12.6 99 262-366 19-140 (144)
40 1djx_A PLC-D1, phosphoinositid 99.4 4.4E-12 1.5E-16 130.7 14.6 104 262-366 495-622 (624)
41 2cjs_A UNC-13 homolog A, MUNC1 99.3 9.5E-12 3.2E-16 107.1 13.2 73 261-341 11-84 (167)
42 2r83_A Synaptotagmin-1; C2A-C2 99.3 2E-12 6.8E-17 120.7 9.7 83 259-341 145-233 (284)
43 1cjy_A CPLA2, protein (cytosol 99.3 7.5E-12 2.6E-16 130.4 9.3 80 260-339 14-98 (749)
44 1dqv_A Synaptotagmin III; beta 99.2 1.4E-11 4.9E-16 115.8 5.2 84 258-341 146-235 (296)
45 3pfq_A PKC-B, PKC-beta, protei 99.1 2.9E-10 9.8E-15 118.7 11.8 93 262-354 170-286 (674)
46 3bxj_A RAS GTPase-activating p 99.1 9.5E-12 3.2E-16 124.8 -1.4 69 261-335 8-79 (483)
47 3qr0_A Phospholipase C-beta (P 98.9 1.3E-08 4.4E-13 107.1 12.6 98 263-368 649-771 (816)
48 2zkm_X 1-phosphatidylinositol- 98.8 1.1E-08 3.8E-13 108.0 11.3 97 262-366 676-797 (799)
49 3ohm_B 1-phosphatidylinositol- 98.8 1.6E-08 5.6E-13 107.0 10.7 96 264-367 725-844 (885)
50 1yrk_A NPKC-delta, protein kin 98.2 1.1E-05 3.8E-10 64.6 11.0 73 262-336 4-80 (126)
51 2enj_A NPKC-theta, protein kin 98.1 1.2E-05 4.1E-10 65.2 8.4 73 262-336 8-85 (138)
52 3l4c_A Dedicator of cytokinesi 89.7 5.2 0.00018 34.9 12.2 67 297-365 77-156 (220)
53 2k1k_A Ephrin type-A receptor 84.6 0.92 3.1E-05 28.1 3.2 24 2-25 11-34 (38)
54 2ks1_B Epidermal growth factor 72.8 3.2 0.00011 26.5 3.0 24 5-28 15-38 (44)
55 2wxf_A Phosphatidylinositol-4, 68.9 17 0.00058 38.8 9.4 72 262-336 215-294 (940)
56 2l2t_A Receptor tyrosine-prote 63.9 5.3 0.00018 25.5 2.6 22 6-27 15-36 (44)
57 1ewf_A BPI, bactericidal/perme 61.5 1.1E+02 0.0038 29.2 13.2 21 162-182 102-122 (456)
58 3hhm_A Phosphatidylinositol-4, 61.3 68 0.0023 34.7 12.2 74 262-337 353-434 (1091)
59 2jwa_A Receptor tyrosine-prote 60.3 7.4 0.00025 24.8 2.8 22 4-25 14-35 (44)
60 1q90_G Cytochrome B6F complex 53.0 18 0.00061 21.8 3.5 10 3-12 5-14 (37)
61 2knc_B Integrin beta-3; transm 46.5 25 0.00086 25.3 4.2 19 4-22 14-33 (79)
62 2y3a_A Phosphatidylinositol-4, 42.8 17 0.00059 39.3 4.1 71 262-335 351-429 (1092)
63 2ks1_B Epidermal growth factor 41.3 17 0.00057 23.1 2.2 24 3-26 17-40 (44)
64 2l2t_A Receptor tyrosine-prote 38.7 18 0.00062 23.0 2.1 22 4-25 17-38 (44)
65 2l34_A TYRO protein tyrosine k 38.0 36 0.0012 20.1 3.2 23 2-24 7-29 (33)
66 1e7u_A Phosphatidylinositol 3- 37.6 97 0.0033 33.1 8.7 73 263-336 217-296 (961)
67 2k9j_B Integrin beta-3; transm 23.5 81 0.0028 19.7 3.2 21 5-25 14-35 (43)
68 2klu_A T-cell surface glycopro 22.5 43 0.0015 23.1 1.8 14 7-20 12-25 (70)
69 1vf5_G Protein PET G; photosyn 21.6 57 0.0019 19.6 2.0 10 3-12 5-14 (37)
70 2obd_A Cholesteryl ester trans 20.9 5.5E+02 0.019 24.5 12.4 18 163-180 112-130 (476)
71 1pi7_A VPU protein, U ORF prot 20.8 1.1E+02 0.0038 18.4 3.3 14 6-19 10-23 (36)
72 2knc_B Integrin beta-3; transm 20.6 1.3E+02 0.0044 21.5 4.2 17 2-19 16-33 (79)
No 1
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.76 E-value=3.6e-18 Score=141.78 Aligned_cols=109 Identities=27% Similarity=0.337 Sum_probs=94.6
Q ss_pred ccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEc
Q 017003 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIF 335 (379)
Q Consensus 256 ~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~ 335 (379)
+..|..+.|.|+|+|++|++|++++..|.+||||++++++ .+++|+++++++||.|||+|.|.+.+. .+.|.++|||+
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN-DRLQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT-EEEECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC-EEEEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 3345678999999999999999999899999999999998 688999999999999999999999875 57899999999
Q ss_pred ccCCCC------------------cEEEcccCC-CCceeeEEEEEEEEEE
Q 017003 336 LLFFPA------------------QWVPILNSE-YGAALSNMHLIYIYKY 366 (379)
Q Consensus 336 d~~~~d------------------~w~~L~~~~-~g~~~g~i~l~~~~~~ 366 (379)
|.+++| .|++|.+.+ .+...|+++++++|.|
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSCCEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CCCCCCCeeEEEEEEHHHccCCCceEEEeecCCCCCccceEEEEEEEEEe
Confidence 987543 799997554 3467899999998865
No 2
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.73 E-value=2.1e-17 Score=137.51 Aligned_cols=104 Identities=19% Similarity=0.323 Sum_probs=92.4
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccC-CCCCCeEeeEEEEEecCCCCceEEEEEEEcccCC
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDKETQSLIFEVYIFLLFF 339 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~-~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~~ 339 (379)
.+.|.|+|+|++|++|+..+..|.+||||++++++ .+++|++++ +++||.|||+|.|.+.+ ....|.++|||+|.++
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~~~ 84 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRT-QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDVGT 84 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSS-CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSSCT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECC-ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCCCC
Confidence 57899999999999999999889999999999988 578999998 89999999999999987 4778999999999987
Q ss_pred CC---------------------cEEEcccCCCCceeeEEEEEEEEEEee
Q 017003 340 PA---------------------QWVPILNSEYGAALSNMHLIYIYKYLR 368 (379)
Q Consensus 340 ~d---------------------~w~~L~~~~~g~~~g~i~l~~~~~~~~ 368 (379)
+| .|++|. ..++..|+++++++|.-..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~--~~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVV--KDEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEE--ETTEEEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEee--cCCccCEEEEEEEEEEeCC
Confidence 65 699996 5678899999999887543
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.3e-17 Score=136.36 Aligned_cols=104 Identities=30% Similarity=0.327 Sum_probs=89.3
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCC---CCceEEEEEEEccc
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDK---ETQSLIFEVYIFLL 337 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~---~~~~L~i~V~D~d~ 337 (379)
...|.|+|+|++|++|+..+. |.+||||++++++ .+++|+++++++||.|||+|.|.+.+. ....|.++|||+|.
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~ 81 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKD-EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET 81 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSS-CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECC-EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC
Confidence 357899999999999999998 9999999999997 679999999999999999999999653 35789999999998
Q ss_pred CCCC--------------------cEEE---cccCCCCceeeEEEEEEEEEE
Q 017003 338 FFPA--------------------QWVP---ILNSEYGAALSNMHLIYIYKY 366 (379)
Q Consensus 338 ~~~d--------------------~w~~---L~~~~~g~~~g~i~l~~~~~~ 366 (379)
+++| .|++ |.+....+..|+++++++|.-
T Consensus 82 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 82 IGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp SSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 8765 5877 766555567789888888753
No 4
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.71 E-value=1.1e-16 Score=135.14 Aligned_cols=103 Identities=23% Similarity=0.340 Sum_probs=89.9
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEcccC---
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFLLF--- 338 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~--- 338 (379)
..|.|+|+|++|++|+.+|..|.+||||++++++ .+++|+++++++||.|||+|.|.+.+. .+.|.++|||+|..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGK-TKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-EEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC-EEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCccc
Confidence 4799999999999999999999999999999987 788999999999999999999999775 57899999999985
Q ss_pred --------CCC------------------cEEEcccCC-CCceeeEEEEEEEEEE
Q 017003 339 --------FPA------------------QWVPILNSE-YGAALSNMHLIYIYKY 366 (379)
Q Consensus 339 --------~~d------------------~w~~L~~~~-~g~~~g~i~l~~~~~~ 366 (379)
++| .|++|.... .+...|+++++++|+.
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e~ 147 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTDKSAVSGAIRLHISVEI 147 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCCSEEEEEEECBCSSTTCCCCCEEEEEEEEEC
T ss_pred cccccccCCCCccEEEEEEEHHHCcCCCCEEEEcccCCCCCCCceEEEEEEEEEe
Confidence 444 799997433 3446799999999874
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.69 E-value=1.5e-16 Score=135.80 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=69.8
Q ss_pred cCCcEEEEEEeecccccccccC----------CCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEE
Q 017003 261 KPQGKVAVTIVKANNLKNMEMI----------GKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIF 330 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~----------g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i 330 (379)
...|.|+|+|++|++|+++|.. |.+||||++.+++.+..+|+++++|+||.|||+|.|.+.+ .+.|.+
T Consensus 26 ~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~~ 103 (157)
T 2fk9_A 26 KFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLEL 103 (157)
T ss_dssp CEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEEE
T ss_pred cCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEEE
Confidence 5689999999999999998843 5689999999988666899999999999999999999975 468999
Q ss_pred EEEEcccCCCC
Q 017003 331 EVYIFLLFFPA 341 (379)
Q Consensus 331 ~V~D~d~~~~d 341 (379)
+|||+|.+++|
T Consensus 104 ~V~D~d~~~~d 114 (157)
T 2fk9_A 104 AVFHETPLGYD 114 (157)
T ss_dssp EEEECCSSSSC
T ss_pred EEEECCCCCCC
Confidence 99999988765
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.69 E-value=1.5e-16 Score=132.49 Aligned_cols=96 Identities=16% Similarity=0.216 Sum_probs=81.6
Q ss_pred CCcEEEEEEeecccccccccCCC-----------CCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEE
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGK-----------SDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIF 330 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~-----------sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i 330 (379)
..|.|+|+|++|++|+++|..++ +||||++++++....+|+++++++||.|||+|.|.+.+. +.|.+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 36899999999999999886655 999999999886668999999999999999999999764 78999
Q ss_pred EEEEcccCCCC----------------------cEEEcccCCCCceeeEEEEEEEEE
Q 017003 331 EVYIFLLFFPA----------------------QWVPILNSEYGAALSNMHLIYIYK 365 (379)
Q Consensus 331 ~V~D~d~~~~d----------------------~w~~L~~~~~g~~~g~i~l~~~~~ 365 (379)
+|||+|.+++| .|++|. ..|+++++++|+
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~------~~G~i~l~l~~~ 132 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE------PEGKVYVIIDLS 132 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB------SSCEEEEEEEEE
T ss_pred EEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC------CCeEEEEEEEEE
Confidence 99999988765 477763 257788887775
No 7
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.68 E-value=2.9e-16 Score=133.34 Aligned_cols=104 Identities=22% Similarity=0.345 Sum_probs=82.3
Q ss_pred ccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC-----eeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEE
Q 017003 260 LKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYI 334 (379)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~-----~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D 334 (379)
....+.|+|+|++|++|+.+|..|.+||||++++.+ ...++|+++++++||.|||+|.|.+.+. ...|.++|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ-QHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT-TCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC-CCEEEEEEEE
Confidence 367899999999999999999889999999999874 2578999999999999999999999764 6789999999
Q ss_pred cccCCCC--------------------------cEEEcccCC-CCceeeEEEEEEEE
Q 017003 335 FLLFFPA--------------------------QWVPILNSE-YGAALSNMHLIYIY 364 (379)
Q Consensus 335 ~d~~~~d--------------------------~w~~L~~~~-~g~~~g~i~l~~~~ 364 (379)
+|.+++| .|++|.... .++..|+++++++|
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 151 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTY 151 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEE
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEE
Confidence 9987654 599986442 34668999998887
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.65 E-value=6.5e-16 Score=126.67 Aligned_cols=78 Identities=26% Similarity=0.480 Sum_probs=69.5
Q ss_pred CcEEEEEEeecccccc---cccCCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEccc
Q 017003 263 QGKVAVTIVKANNLKN---MEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFLL 337 (379)
Q Consensus 263 ~g~L~V~V~~A~~L~~---~d~~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~ 337 (379)
.|.|+|+|++|++|+. .+..|.+||||++++++ ..+++|+++++++||.|||+|.|.+.......|.++|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5889999999999998 46678999999999985 368899999999999999999999976667889999999998
Q ss_pred CCC
Q 017003 338 FFP 340 (379)
Q Consensus 338 ~~~ 340 (379)
++.
T Consensus 82 ~~~ 84 (126)
T 1rlw_A 82 VMD 84 (126)
T ss_dssp SCC
T ss_pred CCC
Confidence 754
No 9
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.65 E-value=1.5e-15 Score=125.63 Aligned_cols=100 Identities=22% Similarity=0.310 Sum_probs=84.1
Q ss_pred CcEEEEEEeecccccccccCCCCCcEEEEEEcC-eeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEcccCCC-
Q 017003 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFLLFFP- 340 (379)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~-~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~~~- 340 (379)
...|+|+|++|++|+++|..|++||||++++.+ ..+++|+++++++||.|||+|.|.+.+. +.|.++|||+|.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIHKK 81 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTTSS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCCCC
Confidence 457899999999999999999999999999975 4689999999999999999999999764 459999999999874
Q ss_pred --C---------------------cEEEcccCC---CCceeeEEEEEEEE
Q 017003 341 --A---------------------QWVPILNSE---YGAALSNMHLIYIY 364 (379)
Q Consensus 341 --d---------------------~w~~L~~~~---~g~~~g~i~l~~~~ 364 (379)
| .|++|.... ..+..|++.++++.
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 3 688887542 22358888888765
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.65 E-value=1.2e-15 Score=132.82 Aligned_cols=104 Identities=21% Similarity=0.333 Sum_probs=83.2
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcC-----eeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEc
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIF 335 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~-----~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~ 335 (379)
...|.|+|+|++|++|+.++..|++||||++++.+ ..+++|+++++++||.|||+|.|.+... ...|.++|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~-~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ-RHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT-TCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC-CCEEEEEEEEC
Confidence 56899999999999999999999999999999874 1578999999999999999999999754 57899999999
Q ss_pred ccCCCC--------------------------cEEEcccC-CCCceeeEEEEEEEEE
Q 017003 336 LLFFPA--------------------------QWVPILNS-EYGAALSNMHLIYIYK 365 (379)
Q Consensus 336 d~~~~d--------------------------~w~~L~~~-~~g~~~g~i~l~~~~~ 365 (379)
|.+++| .||+|... ..++..|+++++++|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEEC
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEE
Confidence 988664 39999753 3456689999988875
No 11
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.63 E-value=2.9e-16 Score=134.02 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=75.8
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC---e--eeEeeeccCCCCCCeEeeEEEEEecCC--CCce
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP---L--FKVKTNVVDNNLNPVWNQTFELIAEDK--ETQS 327 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~---~--~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~ 327 (379)
++..|....+.|+|+|++|+||+++|..|.+||||++++.+ . .+++|+++++|+||+|||+|.|.+... ....
T Consensus 34 ~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~ 113 (155)
T 2z0u_A 34 IALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKT 113 (155)
T ss_dssp EEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCE
T ss_pred EEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCE
Confidence 44456788999999999999999999999999999999975 2 379999999999999999999998542 2468
Q ss_pred EEEEEEEcccCCCC
Q 017003 328 LIFEVYIFLLFFPA 341 (379)
Q Consensus 328 L~i~V~D~d~~~~d 341 (379)
|.++|||+|.+++|
T Consensus 114 L~~~V~d~d~~~~~ 127 (155)
T 2z0u_A 114 LRVDVCTTDRSHLE 127 (155)
T ss_dssp EEEEEEEECTTSCE
T ss_pred EEEEEEECCCCCCC
Confidence 99999999998876
No 12
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.62 E-value=1e-15 Score=129.43 Aligned_cols=93 Identities=30% Similarity=0.497 Sum_probs=79.3
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCCC-CceEEEEEEEcc
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDKE-TQSLIFEVYIFL 336 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~~-~~~L~i~V~D~d 336 (379)
..+.|+|+|++|++|+.++..+.+||||++++.+ ..+++|+++++++||.|||+|.|.+.... ...|.++|||+|
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 4789999999999999999889999999999974 36789999999999999999999986532 468999999999
Q ss_pred cCCCC-------------------cEEEcccCCCCce
Q 017003 337 LFFPA-------------------QWVPILNSEYGAA 354 (379)
Q Consensus 337 ~~~~d-------------------~w~~L~~~~~g~~ 354 (379)
.+++| .||+|.+.+.|+.
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEY 145 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTCCEEEEEECBCHHHHTT
T ss_pred CCCCCCEEEEEEEEHHHhCcCccCCeEEccCCCCCcc
Confidence 98765 6888876555544
No 13
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.62 E-value=3.2e-16 Score=131.01 Aligned_cols=101 Identities=23% Similarity=0.291 Sum_probs=83.5
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEe-c--CCCCce
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIA-E--DKETQS 327 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v-~--~~~~~~ 327 (379)
++..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+ . +.....
T Consensus 12 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~ 91 (141)
T 1v27_A 12 IKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERM 91 (141)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCE
T ss_pred EEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCE
Confidence 34446678899999999999999999999999999999832 3678999999999999999999984 3 223578
Q ss_pred EEEEEEEcccCCC--C-------------------cEEEcccCCCCcee
Q 017003 328 LIFEVYIFLLFFP--A-------------------QWVPILNSEYGAAL 355 (379)
Q Consensus 328 L~i~V~D~d~~~~--d-------------------~w~~L~~~~~g~~~ 355 (379)
|.++|||+|.+++ | .||+|.+.+.|...
T Consensus 92 l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~~~~W~~L~~~~~g~~s 140 (141)
T 1v27_A 92 LEITLWDQARVREEESEFLGEILIELETALLDDEPHWYKLQTHDSGPSS 140 (141)
T ss_dssp EEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSSEEEEEECBCCSSCCCC
T ss_pred EEEEEEECCCCcCCCCceEEEEEEEccccCCCCCCceEECcccccCCCC
Confidence 9999999999875 3 58888877666554
No 14
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.62 E-value=5.1e-15 Score=128.54 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=84.7
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEcccCCC
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFLLFFP 340 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~~~ 340 (379)
...+.|+|+|++|++|+..+..+++||||++++++ .+++|+++++++||.|||+|.|.+.. .+.|.++|||+|.+++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~-~~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~~~ 109 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDG-QSKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTLKS 109 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETT-EEEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSSSC
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECC-EEeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCCCC
Confidence 46789999999999999444455699999999998 78999999999999999999999853 7889999999999876
Q ss_pred C-------------------------cEEEcccCC-CCceeeEEEEEEEEEEe
Q 017003 341 A-------------------------QWVPILNSE-YGAALSNMHLIYIYKYL 367 (379)
Q Consensus 341 d-------------------------~w~~L~~~~-~g~~~g~i~l~~~~~~~ 367 (379)
| .|++|...+ ..+..|++.++++|--.
T Consensus 110 dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 110 DVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp CEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred CceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 5 289887542 33567888777776543
No 15
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.61 E-value=1.9e-15 Score=125.68 Aligned_cols=82 Identities=17% Similarity=0.206 Sum_probs=70.5
Q ss_pred cccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEE-ecC--CCCceEEEE
Q 017003 259 ELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELI-AED--KETQSLIFE 331 (379)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~-v~~--~~~~~L~i~ 331 (379)
+....|.|+|+|++|++|+. +..|.+||||++++.+ ..+++|+++++++||.|||+|.|. +.. .....|.++
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp EEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 45678999999999999997 7788999999999832 357899999999999999999999 653 245789999
Q ss_pred EEEcccCCCC
Q 017003 332 VYIFLLFFPA 341 (379)
Q Consensus 332 V~D~d~~~~d 341 (379)
|||+|.+++|
T Consensus 94 V~d~d~~~~~ 103 (134)
T 2b3r_A 94 VLSAESLREN 103 (134)
T ss_dssp EEECCSSSCC
T ss_pred EEECCCCCCC
Confidence 9999998876
No 16
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.61 E-value=2.4e-15 Score=127.80 Aligned_cols=100 Identities=20% Similarity=0.303 Sum_probs=84.1
Q ss_pred cccccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEe--cCCCCc
Q 017003 253 VDTSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIA--EDKETQ 326 (379)
Q Consensus 253 ~d~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v--~~~~~~ 326 (379)
+.++..|....|.|+|+|++|++|+..+ .|.+||||++++.+ ..+++|+++++++||.|||+|.|.+ .+. ..
T Consensus 16 ~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~ 93 (153)
T 3fbk_A 16 GQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDD-QK 93 (153)
T ss_dssp CEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGT-TS
T ss_pred EEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHh-CC
Confidence 3455667889999999999999999999 68999999999843 2578999999999999999999998 443 35
Q ss_pred eEEEEEEEcccCCC-C---------------------cEEEcccCCCCce
Q 017003 327 SLIFEVYIFLLFFP-A---------------------QWVPILNSEYGAA 354 (379)
Q Consensus 327 ~L~i~V~D~d~~~~-d---------------------~w~~L~~~~~g~~ 354 (379)
.|.++|||+|.+++ | .||+|.+.++|+.
T Consensus 94 ~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g~~ 143 (153)
T 3fbk_A 94 RLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLGRT 143 (153)
T ss_dssp EEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGGGT
T ss_pred EEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhccc
Confidence 69999999998765 4 6999987777754
No 17
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.61 E-value=1.8e-15 Score=128.39 Aligned_cols=88 Identities=31% Similarity=0.402 Sum_probs=75.9
Q ss_pred ccccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEE
Q 017003 254 DTSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLI 329 (379)
Q Consensus 254 d~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~ 329 (379)
.++..|.+..+.|+|+|++|++|+..+..+.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.
T Consensus 32 ~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 111 (152)
T 1rsy_A 32 QYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLV 111 (152)
T ss_dssp EEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEE
T ss_pred EEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEE
Confidence 344557788999999999999999999889999999999953 3578999999999999999999988532 357899
Q ss_pred EEEEEcccCCCC
Q 017003 330 FEVYIFLLFFPA 341 (379)
Q Consensus 330 i~V~D~d~~~~d 341 (379)
++|||+|.+++|
T Consensus 112 i~V~d~d~~~~~ 123 (152)
T 1rsy_A 112 MAVYDFDRFSKH 123 (152)
T ss_dssp EEEEECCSSSCC
T ss_pred EEEEECCCCCCC
Confidence 999999998776
No 18
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.60 E-value=1.7e-15 Score=126.02 Aligned_cols=93 Identities=30% Similarity=0.461 Sum_probs=80.3
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEc----CeeeEeeeccCCCCCCeEeeEEEEEecCC-CCceEEEEEEEcc
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIK----PLFKVKTNVVDNNLNPVWNQTFELIAEDK-ETQSLIFEVYIFL 336 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~----~~~~~~T~v~~~tlnP~Wne~f~f~v~~~-~~~~L~i~V~D~d 336 (379)
..|.|+|+|++|++|+.++..|.+||||++++. ...+++|+++++++||.|||+|.|.+... ....|.++|||+|
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 579999999999999999999999999999984 23679999999999999999999998643 2357999999999
Q ss_pred cCCCC-------------------cEEEcccCCCCce
Q 017003 337 LFFPA-------------------QWVPILNSEYGAA 354 (379)
Q Consensus 337 ~~~~d-------------------~w~~L~~~~~g~~ 354 (379)
.+++| .|++|.+.++|+.
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~~~~W~~L~~~~~g~~ 130 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMPASGWYKLLNQEEGEY 130 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSCEEEEEECBCHHHHTT
T ss_pred CCCCCceEEEEEEeHHHhccCccCceEECcCcccccc
Confidence 98776 7999987766664
No 19
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.60 E-value=1.8e-15 Score=124.54 Aligned_cols=86 Identities=24% Similarity=0.244 Sum_probs=69.7
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEec---CCCCce
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAE---DKETQS 327 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~---~~~~~~ 327 (379)
++..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+. +.....
T Consensus 9 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~ 88 (129)
T 2bwq_A 9 IKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERM 88 (129)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCE
T ss_pred EEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCe
Confidence 44456778999999999999999999889999999999832 36899999999999999999999852 223578
Q ss_pred EEEEEEEcccCCC
Q 017003 328 LIFEVYIFLLFFP 340 (379)
Q Consensus 328 L~i~V~D~d~~~~ 340 (379)
|.++|||+|.+++
T Consensus 89 l~~~V~d~d~~~~ 101 (129)
T 2bwq_A 89 LEITLWDQARVRE 101 (129)
T ss_dssp EEEEEEEC-----
T ss_pred EEEEEEECCcCcC
Confidence 9999999999875
No 20
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.60 E-value=2.7e-15 Score=126.67 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=74.5
Q ss_pred cccccccCCcEEEEEEeecccccccc-cCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCC--CCce
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNME-MIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQS 327 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d-~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~ 327 (379)
++..|.+..+.|+|+|++|++|+.++ ..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....
T Consensus 14 ~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~ 93 (148)
T 3fdw_A 14 FSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRT 93 (148)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCE
T ss_pred EEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceE
Confidence 44557788999999999999999988 578999999999974 2478999999999999999999998653 2457
Q ss_pred EEEEEEEcccCCCC
Q 017003 328 LIFEVYIFLLFFPA 341 (379)
Q Consensus 328 L~i~V~D~d~~~~d 341 (379)
|.++|||+|.+++|
T Consensus 94 L~~~V~d~d~~~~~ 107 (148)
T 3fdw_A 94 LQFSVWHHGRFGRN 107 (148)
T ss_dssp EEEEEEEECGGGCE
T ss_pred EEEEEEECCCCcCC
Confidence 99999999998765
No 21
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.59 E-value=3.1e-15 Score=125.49 Aligned_cols=87 Identities=31% Similarity=0.403 Sum_probs=75.5
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEEE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIF 330 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~i 330 (379)
++..|....+.|+|+|++|++|+.++..+.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.+
T Consensus 25 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i 104 (143)
T 3f04_A 25 YSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVM 104 (143)
T ss_dssp EEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEE
T ss_pred EEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEE
Confidence 34456688999999999999999999889999999999943 3579999999999999999999988532 3578999
Q ss_pred EEEEcccCCCC
Q 017003 331 EVYIFLLFFPA 341 (379)
Q Consensus 331 ~V~D~d~~~~d 341 (379)
+|||+|.+++|
T Consensus 105 ~V~d~d~~~~~ 115 (143)
T 3f04_A 105 AVYDFDRFSKH 115 (143)
T ss_dssp EEEECCSSSCC
T ss_pred EEEeCCCCCCC
Confidence 99999998876
No 22
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=2.3e-15 Score=126.06 Aligned_cols=87 Identities=29% Similarity=0.371 Sum_probs=74.2
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecC---CCCceEE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAED---KETQSLI 329 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~---~~~~~L~ 329 (379)
++..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+.. .....|.
T Consensus 17 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~ 96 (141)
T 2d8k_A 17 FSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILY 96 (141)
T ss_dssp EEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEE
T ss_pred EEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEE
Confidence 34446678999999999999999999889999999999953 357899999999999999999998522 2357899
Q ss_pred EEEEEcccCCCC
Q 017003 330 FEVYIFLLFFPA 341 (379)
Q Consensus 330 i~V~D~d~~~~d 341 (379)
++|||+|.+++|
T Consensus 97 i~V~d~d~~~~~ 108 (141)
T 2d8k_A 97 LQVLDYDRFSRN 108 (141)
T ss_dssp EEEEECCSSSSC
T ss_pred EEEEECCCCCCC
Confidence 999999998776
No 23
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.58 E-value=1.9e-15 Score=129.17 Aligned_cols=87 Identities=31% Similarity=0.431 Sum_probs=74.7
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSL 328 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L 328 (379)
++..|.+..|.|+|+|++|++|+.+|..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|
T Consensus 16 ~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l 95 (159)
T 1tjx_A 16 FSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQV 95 (159)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEE
T ss_pred EEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEE
Confidence 34456788999999999999999999889999999999863 2478999999999999999999998543 24579
Q ss_pred EEEEEEcccCCCC
Q 017003 329 IFEVYIFLLFFPA 341 (379)
Q Consensus 329 ~i~V~D~d~~~~d 341 (379)
.++|||+|.+++|
T Consensus 96 ~i~V~d~d~~~~~ 108 (159)
T 1tjx_A 96 VVTVLDYDKIGKN 108 (159)
T ss_dssp EEEEEECCSSSCC
T ss_pred EEEEEECCCCCCC
Confidence 9999999998765
No 24
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.58 E-value=7.4e-15 Score=122.64 Aligned_cols=84 Identities=15% Similarity=0.126 Sum_probs=70.7
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC---eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP---LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLI 329 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~---~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~ 329 (379)
++..|....+.|+|+|++|+ ++|..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.
T Consensus 17 ~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~ 93 (138)
T 1wfm_A 17 YCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLT 93 (138)
T ss_dssp EEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEE
T ss_pred EEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEE
Confidence 44456778999999999999 367789999999999853 3468999999999999999999998643 356899
Q ss_pred EEEEEcccCCCC
Q 017003 330 FEVYIFLLFFPA 341 (379)
Q Consensus 330 i~V~D~d~~~~d 341 (379)
++|||+|.+++|
T Consensus 94 ~~V~d~d~~~~d 105 (138)
T 1wfm_A 94 LTLRTCDRFSRH 105 (138)
T ss_dssp EEEEECCSSCTT
T ss_pred EEEEECCCCCCC
Confidence 999999998775
No 25
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.57 E-value=8.9e-15 Score=121.63 Aligned_cols=87 Identities=30% Similarity=0.356 Sum_probs=75.3
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCCC--CceE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSL 328 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~~--~~~L 328 (379)
++..|.+..|.|+|+|++|++|+..+..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+.... ...|
T Consensus 7 ~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l 86 (138)
T 3n5a_A 7 LSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTI 86 (138)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEE
T ss_pred EEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEE
Confidence 34456788999999999999999999989999999999864 25789999999999999999999986532 3679
Q ss_pred EEEEEEcccCCCC
Q 017003 329 IFEVYIFLLFFPA 341 (379)
Q Consensus 329 ~i~V~D~d~~~~d 341 (379)
.++|||+|.+++|
T Consensus 87 ~~~V~d~~~~~~~ 99 (138)
T 3n5a_A 87 IITVMDKDKLSRN 99 (138)
T ss_dssp EEEEEECCSSSCC
T ss_pred EEEEEECCCCCCC
Confidence 9999999998776
No 26
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.56 E-value=1.3e-14 Score=125.00 Aligned_cols=87 Identities=28% Similarity=0.367 Sum_probs=75.7
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSL 328 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L 328 (379)
++..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|
T Consensus 28 ~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L 107 (166)
T 2cm5_A 28 VSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSL 107 (166)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEE
T ss_pred EEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEE
Confidence 34446678999999999999999999889999999999975 3589999999999999999999998542 25689
Q ss_pred EEEEEEcccCCCC
Q 017003 329 IFEVYIFLLFFPA 341 (379)
Q Consensus 329 ~i~V~D~d~~~~d 341 (379)
.++|||+|.+++|
T Consensus 108 ~i~V~d~d~~~~~ 120 (166)
T 2cm5_A 108 DISVWDYDIGKSN 120 (166)
T ss_dssp EEEEEECCSSSCC
T ss_pred EEEEEECCCCCCC
Confidence 9999999998776
No 27
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.56 E-value=2.1e-14 Score=134.19 Aligned_cols=111 Identities=28% Similarity=0.404 Sum_probs=93.0
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEEE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIF 330 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~i 330 (379)
++..|....|.|+|+|++|++|+.+|..|.+||||++++++ ..+++|+++++++||.|||+|.|.+... ....|.+
T Consensus 10 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~ 89 (284)
T 2r83_A 10 YSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVM 89 (284)
T ss_dssp EEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEE
T ss_pred EEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEE
Confidence 44557788999999999999999999899999999999964 3578999999999999999999998642 3578999
Q ss_pred EEEEcccCCCC--------------------cEEEcccCCC--CceeeEEEEEEEEE
Q 017003 331 EVYIFLLFFPA--------------------QWVPILNSEY--GAALSNMHLIYIYK 365 (379)
Q Consensus 331 ~V~D~d~~~~d--------------------~w~~L~~~~~--g~~~g~i~l~~~~~ 365 (379)
+|||+|.+++| .|++|..... .+..|++.+++.|.
T Consensus 90 ~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~ 146 (284)
T 2r83_A 90 AVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV 146 (284)
T ss_dssp EEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE
T ss_pred EEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec
Confidence 99999988765 6999975432 34678988888875
No 28
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.55 E-value=2.3e-14 Score=121.65 Aligned_cols=87 Identities=26% Similarity=0.208 Sum_probs=69.1
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC--e--eeEeeeccCCCCCCeEeeEEEEEecCC--CCceE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP--L--FKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSL 328 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~--~--~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L 328 (379)
++..|.+..+.|.|+|++|++|+.++..|.+||||++++.+ . .+++|+++++++||.|||+|.|.+... ....|
T Consensus 21 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l 100 (153)
T 1w15_A 21 VSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISV 100 (153)
T ss_dssp EEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEE
T ss_pred EEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEE
Confidence 34456778999999999999999999889999999999843 2 367999999999999999999998654 24679
Q ss_pred EEEEEEcccCCCC
Q 017003 329 IFEVYIFLLFFPA 341 (379)
Q Consensus 329 ~i~V~D~d~~~~d 341 (379)
.++|||+|.+++|
T Consensus 101 ~v~V~d~d~~~~~ 113 (153)
T 1w15_A 101 EFLVLDSERGSRN 113 (153)
T ss_dssp EEEEEECCTTSCC
T ss_pred EEEEEeCCCCCCC
Confidence 9999999998776
No 29
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.54 E-value=3.1e-15 Score=125.29 Aligned_cols=79 Identities=30% Similarity=0.444 Sum_probs=68.8
Q ss_pred CcEEEEEEeecccccccccCCCCCcEEEEEEcCe-------------eeEeeeccCCCCCCeEeeEEEEE-ec--CCCCc
Q 017003 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPL-------------FKVKTNVVDNNLNPVWNQTFELI-AE--DKETQ 326 (379)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~-------------~~~~T~v~~~tlnP~Wne~f~f~-v~--~~~~~ 326 (379)
.|.|+|+|++|++|+.+|..|.+||||++++.+. .+++|+++++++||.|||+|.|. +. +....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 7899999999999999999999999999999762 25789999999999999999997 53 22467
Q ss_pred eEEEEEEEcccCCCC
Q 017003 327 SLIFEVYIFLLFFPA 341 (379)
Q Consensus 327 ~L~i~V~D~d~~~~d 341 (379)
.|.++|||+|.+++|
T Consensus 97 ~l~i~V~d~d~~~~~ 111 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSN 111 (142)
T ss_dssp EEEEEEEEECSSSCE
T ss_pred EEEEEEEECCCCCCC
Confidence 899999999998765
No 30
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.54 E-value=3e-14 Score=118.70 Aligned_cols=94 Identities=28% Similarity=0.350 Sum_probs=77.5
Q ss_pred cccccccCCcEEEEEEeecccccccccC-CCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEE-ecCC--CCceE
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMI-GKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELI-AEDK--ETQSL 328 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~-g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~-v~~~--~~~~L 328 (379)
++..|.+..+.|+|+|++|++|+.+|.. +.+||||++++.+ ..+++|+++++++||.|||+|.|. +... ....|
T Consensus 13 ~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l 92 (138)
T 1ugk_A 13 FSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELAL 92 (138)
T ss_dssp EEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEE
T ss_pred EEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEE
Confidence 3444667899999999999999999985 8999999999964 368999999999999999999996 5432 34689
Q ss_pred EEEEEEcccCCCC-----cEEEccc
Q 017003 329 IFEVYIFLLFFPA-----QWVPILN 348 (379)
Q Consensus 329 ~i~V~D~d~~~~d-----~w~~L~~ 348 (379)
.++|||+|.+++| ..++|.+
T Consensus 93 ~i~V~d~d~~~~~~~lG~~~i~l~~ 117 (138)
T 1ugk_A 93 HFTILSFDRFSRDDIIGEVLIPLSG 117 (138)
T ss_dssp EEEEEEECSSCCCCCCEEEEEECTT
T ss_pred EEEEEECCCCCCCcEEEEEEEehhH
Confidence 9999999998776 3555543
No 31
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=8.2e-15 Score=122.75 Aligned_cols=83 Identities=27% Similarity=0.329 Sum_probs=71.0
Q ss_pred ccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEE
Q 017003 256 SELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLI 329 (379)
Q Consensus 256 ~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~ 329 (379)
+..|.+..+.|+|+|++|++|+.++..| +||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.
T Consensus 16 ~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 94 (142)
T 2dmg_A 16 TIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLD 94 (142)
T ss_dssp EEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEE
T ss_pred EEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEE
Confidence 4446678999999999999999999888 99999999853 2578999999999999999999988432 245899
Q ss_pred EEEEEcccCC
Q 017003 330 FEVYIFLLFF 339 (379)
Q Consensus 330 i~V~D~d~~~ 339 (379)
|+|||+|.++
T Consensus 95 i~V~d~d~~~ 104 (142)
T 2dmg_A 95 VAVKNSGGFL 104 (142)
T ss_dssp EEEEECCCSS
T ss_pred EEEEECCCcc
Confidence 9999999875
No 32
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.54 E-value=1.2e-14 Score=121.66 Aligned_cols=96 Identities=27% Similarity=0.378 Sum_probs=79.1
Q ss_pred cccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEE-ecC--CCCce
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELI-AED--KETQS 327 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~-v~~--~~~~~ 327 (379)
++..|.+..+.|+|+|++|++|+.++..|.+||||++++.+ ..+++|+++++++||.|||+|.|. +.. .....
T Consensus 20 ~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~ 99 (142)
T 2chd_A 20 FSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKT 99 (142)
T ss_dssp EEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCE
T ss_pred EEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCE
Confidence 44556678999999999999999999889999999999975 368999999999999999999998 532 12368
Q ss_pred EEEEEEEcccCCCC-----cEEEcccCC
Q 017003 328 LIFEVYIFLLFFPA-----QWVPILNSE 350 (379)
Q Consensus 328 L~i~V~D~d~~~~d-----~w~~L~~~~ 350 (379)
|.++|||+|.+++| ..++|.+-.
T Consensus 100 l~i~V~d~d~~~~d~~iG~~~i~l~~l~ 127 (142)
T 2chd_A 100 LRISVCDEDKFGHNEFIGETRFSLKKLK 127 (142)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEGGGCC
T ss_pred EEEEEEECCCCCCCcEEEEEEEEHHHcC
Confidence 99999999998876 355664433
No 33
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.52 E-value=2.5e-14 Score=123.91 Aligned_cols=88 Identities=18% Similarity=0.315 Sum_probs=75.5
Q ss_pred CCcEEEEEEeeccccccccc-CCCCCcEEEEEEcCe----eeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEE-Ec
Q 017003 262 PQGKVAVTIVKANNLKNMEM-IGKSDPYAVVHIKPL----FKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVY-IF 335 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~-~g~sdPyv~v~~~~~----~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~-D~ 335 (379)
..|.|.|+|++|++|+.+|. .|.+||||++++.+. .+++|+++++++||.|||+|.|.+.. ....|.++|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 58999999999999999985 689999999998642 37899999999999999999999864 4678999999 99
Q ss_pred ccCCCC--------------------cEEEcccCC
Q 017003 336 LLFFPA--------------------QWVPILNSE 350 (379)
Q Consensus 336 d~~~~d--------------------~w~~L~~~~ 350 (379)
|.+++| .||+|.+..
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 998775 799997543
No 34
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.51 E-value=3.3e-13 Score=136.38 Aligned_cols=142 Identities=19% Similarity=0.251 Sum_probs=105.0
Q ss_pred EecCCCcceEEEEeeecCcCcccccchHHHHHHHHHHHHhhhccc-----C--ceEEeeeCCCC---------ccccc-c
Q 017003 196 ALLSEPKPRIDYTLKAVGGSLTAIPGIADMIDDTVDSIITDMLQW-----P--HRIVVPIGGIP---------VDTSE-L 258 (379)
Q Consensus 196 sf~~~P~p~idf~l~~~g~~i~~iP~l~~~i~~~i~~~i~~~~v~-----P--~~~~vpl~~~~---------~d~~~-l 258 (379)
|+..-|. -|+|++.|+..-+..-+--.+-++.++.+.+.+.-.+ | |-. .++.+.+ .-.+. .
T Consensus 310 Sv~~~P~-~I~~~l~PI~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~-~~l~g~~C~C~C~~~~~t~~~~C 387 (540)
T 3nsj_A 310 SLPSNPG-LVDYSLEPLHTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQ-HKSSHDSCQCECQDSKVTNQDCC 387 (540)
T ss_dssp HTTTSCE-EEEEEEEEGGGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTE-EECSSCTTCEEESCTTTBCGGGC
T ss_pred HHhhCCc-eEEEEEEEHHHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCC-ccCCCCceEeeCCCCCCcccccc
Confidence 3444453 5999999986322223456778888888888887666 4 222 2343311 01111 1
Q ss_pred cc-cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecC-CCCceEEEEEEEcc
Q 017003 259 EL-KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAED-KETQSLIFEVYIFL 336 (379)
Q Consensus 259 ~~-~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~-~~~~~L~i~V~D~d 336 (379)
.. ...|.|+|+|++|++|+. |..|++||||++++++ .+++|+++++++||+|||+|.|.+.+ ...+.|.|+|||+|
T Consensus 388 ~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~-~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D 465 (540)
T 3nsj_A 388 PRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGG-QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDAD 465 (540)
T ss_dssp BSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETT-EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECC
T ss_pred cccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECC-EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECC
Confidence 11 346899999999999998 9899999999999997 57999999999999999999998643 35788999999999
Q ss_pred cCCCC
Q 017003 337 LFFPA 341 (379)
Q Consensus 337 ~~~~d 341 (379)
.+++|
T Consensus 466 ~~~~d 470 (540)
T 3nsj_A 466 YGWDD 470 (540)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99886
No 35
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.51 E-value=5.9e-14 Score=132.15 Aligned_cols=112 Identities=28% Similarity=0.371 Sum_probs=91.5
Q ss_pred ccccccccCCcEEEEEEeecccccccccCCCCCcEEEEEEc--CeeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEE
Q 017003 254 DTSELELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIK--PLFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLI 329 (379)
Q Consensus 254 d~~~l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~--~~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~ 329 (379)
.++..|....+.|+|+|++|++|+.+|..|.+||||++++. +..+++|+++++++||.|||+|.|.+... ....|.
T Consensus 10 ~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~ 89 (296)
T 1dqv_A 10 SFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLH 89 (296)
T ss_dssp EEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCE
T ss_pred EEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEE
Confidence 34555778899999999999999999999999999999994 23678999999999999999999998532 245899
Q ss_pred EEEEEcccCCCC----------------------cEEEcccCC-CCceeeEEEEEEEEE
Q 017003 330 FEVYIFLLFFPA----------------------QWVPILNSE-YGAALSNMHLIYIYK 365 (379)
Q Consensus 330 i~V~D~d~~~~d----------------------~w~~L~~~~-~g~~~g~i~l~~~~~ 365 (379)
++|||+|.+++| .|++|.... .....|++.+++.|.
T Consensus 90 ~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~ 148 (296)
T 1dqv_A 90 FSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYL 148 (296)
T ss_dssp EEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEE
T ss_pred EEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEec
Confidence 999999988654 488886433 234578888888875
No 36
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=1.2e-14 Score=122.54 Aligned_cols=87 Identities=18% Similarity=0.255 Sum_probs=72.3
Q ss_pred cccccccCCcEEEEEEeeccccccc-cc------CCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecCC--
Q 017003 255 TSELELKPQGKVAVTIVKANNLKNM-EM------IGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDK-- 323 (379)
Q Consensus 255 ~~~l~~~~~g~L~V~V~~A~~L~~~-d~------~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~~-- 323 (379)
++..|.+..+.|+|+|++|++|+.+ +. .+.+||||++++.+ ..+++|+++++++||.|||+|.|.+...
T Consensus 17 ~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 96 (147)
T 2enp_A 17 FSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEA 96 (147)
T ss_dssp EEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHH
T ss_pred EEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHh
Confidence 4455778899999999999999984 33 35899999999974 3578999999999999999999988532
Q ss_pred CCceEEEEEEEcccCCCC
Q 017003 324 ETQSLIFEVYIFLLFFPA 341 (379)
Q Consensus 324 ~~~~L~i~V~D~d~~~~d 341 (379)
....|.++|||+|.+++|
T Consensus 97 ~~~~L~~~V~d~d~~~~~ 114 (147)
T 2enp_A 97 QRRTLLLTVVDFDKFSRH 114 (147)
T ss_dssp HHSEEEEEEECCSTTCCS
T ss_pred ccCEEEEEEEECCCCcCC
Confidence 235899999999998765
No 37
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.47 E-value=3.8e-13 Score=135.86 Aligned_cols=102 Identities=20% Similarity=0.367 Sum_probs=87.4
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEEcccCCC
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFLLFFP 340 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~~~ 340 (379)
...|.|+|+|++|++|+++|..|.+||||++++++ .+++|+++++++||.|||+|.|.+.+...+.|.++|||+|.+++
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~-~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGS-QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETT-EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECC-eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 46789999999999999999999999999999987 68999999999999999999999987767889999999999887
Q ss_pred C------------------------cEEEcccCCCCceeeEEEEEEEEEEe
Q 017003 341 A------------------------QWVPILNSEYGAALSNMHLIYIYKYL 367 (379)
Q Consensus 341 d------------------------~w~~L~~~~~g~~~g~i~l~~~~~~~ 367 (379)
| .|+++.+. ..|++.+.+.++.+
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~----~~G~i~l~~~l~lf 509 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV----PTGEVWVRFDLQLF 509 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS----SSCEEEEEEEEEEC
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCCCC----CCceEEEEEEEEEc
Confidence 5 48888543 45677777777654
No 38
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.41 E-value=9.3e-13 Score=108.90 Aligned_cols=72 Identities=19% Similarity=0.205 Sum_probs=58.5
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccC-CCCCCeEeeEEEEEecCCCCceEEEEEEEcccCCC
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDKETQSLIFEVYIFLLFFP 340 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~-~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~~~ 340 (379)
..+.|+|+|++|+++.. .|.+||||++. . +..+|++++ +++||.|||+|.|.+.+. ...|.++|||+| +++
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~~ 74 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V--QNVKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LIW 74 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E--TTEEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-SSC
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e--cCEEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-CCC
Confidence 46899999999998853 57899999999 3 234555554 699999999999999864 567999999999 766
Q ss_pred C
Q 017003 341 A 341 (379)
Q Consensus 341 d 341 (379)
|
T Consensus 75 d 75 (131)
T 2cjt_A 75 D 75 (131)
T ss_dssp E
T ss_pred C
Confidence 5
No 39
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.37 E-value=5.8e-12 Score=103.89 Aligned_cols=99 Identities=12% Similarity=0.224 Sum_probs=83.3
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccC-CCCCCeEeeEEEEEecCC--CCceEEEEEEEcccC
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDK--ETQSLIFEVYIFLLF 338 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~-~tlnP~Wne~f~f~v~~~--~~~~L~i~V~D~d~~ 338 (379)
..-.|+|++.+|++|+ |++|||+++.+.+ .+++|++++ ++.||.|||.|+|++..+ .+..|.+.|+|++++
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg-~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v 92 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFRG-QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKV 92 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEETT-EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTT
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEec-cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccc
Confidence 3457999999999998 6899999999987 789999998 699999999999998643 467899999999999
Q ss_pred CCC--------------------cEEEcccCCCCceeeEEEEEEEEEE
Q 017003 339 FPA--------------------QWVPILNSEYGAALSNMHLIYIYKY 366 (379)
Q Consensus 339 ~~d--------------------~w~~L~~~~~g~~~g~i~l~~~~~~ 366 (379)
+++ .+-+|.+.+.....+++.+.+.|+-
T Consensus 93 ~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 93 FSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp SCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 987 3567776666666678888888864
No 40
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.37 E-value=4.4e-12 Score=130.70 Aligned_cols=104 Identities=21% Similarity=0.271 Sum_probs=83.9
Q ss_pred CCcEEEEEEeeccccccccc--CCCCCcEEEEEEcC----eeeEeeeccCCC-CCCeEeeEEEEEecCCCCceEEEEEEE
Q 017003 262 PQGKVAVTIVKANNLKNMEM--IGKSDPYAVVHIKP----LFKVKTNVVDNN-LNPVWNQTFELIAEDKETQSLIFEVYI 334 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~--~g~sdPyv~v~~~~----~~~~~T~v~~~t-lnP~Wne~f~f~v~~~~~~~L~i~V~D 334 (379)
..+.|+|+|++|++|+..+. .|.+||||++.+.+ ..+++|++++++ +||.|||+|.|.+..+....|.++|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56799999999999999884 68899999999843 257899999987 999999999999987656789999999
Q ss_pred cccCCCC-----------------cEEEcccCCCCceeeEEEEEEEEEE
Q 017003 335 FLLFFPA-----------------QWVPILNSEYGAALSNMHLIYIYKY 366 (379)
Q Consensus 335 ~d~~~~d-----------------~w~~L~~~~~g~~~g~i~l~~~~~~ 366 (379)
+|.+++| .|++|.+. .|+......|.+++.+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~r~v~L~d~-~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGYRHVHLLSK-NGDQHPSATLFVKISI 622 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEEEEEEEECT-TSCEEEEEEEEEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCcEEEeCCCC-CcCCCCceEEEEEEEE
Confidence 9998776 69999744 5665444444444444
No 41
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.35 E-value=9.5e-12 Score=107.14 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=60.0
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccC-CCCCCeEeeEEEEEecCCCCceEEEEEEEcccCC
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVD-NNLNPVWNQTFELIAEDKETQSLIFEVYIFLLFF 339 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~-~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d~~~ 339 (379)
...+.|+|+|++|+++. ..|++||||++. . +..+|++++ +++||.|||+|.|.+.+. ...|.++|||+| ++
T Consensus 11 g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~--~~~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~~ 82 (167)
T 2cjs_A 11 GILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V--QNVESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-LI 82 (167)
T ss_dssp SCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E--TTEEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC-SS
T ss_pred CceEEEEEEEEEEECCC---CCCCCCeEEEEE-e--cceEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC-CC
Confidence 35789999999999884 257899999999 3 345666665 699999999999999864 567999999999 76
Q ss_pred CC
Q 017003 340 PA 341 (379)
Q Consensus 340 ~d 341 (379)
+|
T Consensus 83 ~d 84 (167)
T 2cjs_A 83 WD 84 (167)
T ss_dssp CC
T ss_pred CC
Confidence 66
No 42
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.35 E-value=2e-12 Score=120.66 Aligned_cols=83 Identities=31% Similarity=0.472 Sum_probs=71.6
Q ss_pred cccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCCC--CceEEEEE
Q 017003 259 ELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDKE--TQSLIFEV 332 (379)
Q Consensus 259 ~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~~--~~~L~i~V 332 (379)
|.+..+.|.|+|++|++|+.+|..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+.... ...|.++|
T Consensus 145 ~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 224 (284)
T 2r83_A 145 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 224 (284)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEE
T ss_pred ecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEE
Confidence 4567899999999999999999989999999999853 24689999999999999999999986532 34799999
Q ss_pred EEcccCCCC
Q 017003 333 YIFLLFFPA 341 (379)
Q Consensus 333 ~D~d~~~~d 341 (379)
||+|.+++|
T Consensus 225 ~d~d~~~~~ 233 (284)
T 2r83_A 225 LDYDKIGKN 233 (284)
T ss_dssp EECCSSSCC
T ss_pred EeCCCCCCC
Confidence 999998765
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.26 E-value=7.5e-12 Score=130.36 Aligned_cols=80 Identities=25% Similarity=0.457 Sum_probs=72.9
Q ss_pred ccCCcEEEEEEeecccccc---cccCCCCCcEEEEEEcC--eeeEeeeccCCCCCCeEeeEEEEEecCCCCceEEEEEEE
Q 017003 260 LKPQGKVAVTIVKANNLKN---MEMIGKSDPYAVVHIKP--LFKVKTNVVDNNLNPVWNQTFELIAEDKETQSLIFEVYI 334 (379)
Q Consensus 260 ~~~~g~L~V~V~~A~~L~~---~d~~g~sdPyv~v~~~~--~~~~~T~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D 334 (379)
..+.|.|+|+|++|++|+. +|..|++||||++++.+ ..+++|+++++++||+|||+|.|.+.....+.|.++|||
T Consensus 14 ~~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D 93 (749)
T 1cjy_A 14 HQYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMD 93 (749)
T ss_dssp CCCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEE
T ss_pred CCCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEE
Confidence 3678999999999999999 88889999999999984 367899999999999999999999987667889999999
Q ss_pred cccCC
Q 017003 335 FLLFF 339 (379)
Q Consensus 335 ~d~~~ 339 (379)
+|.++
T Consensus 94 ~D~~~ 98 (749)
T 1cjy_A 94 ANYVM 98 (749)
T ss_dssp CCSSS
T ss_pred CCCCC
Confidence 99887
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.17 E-value=1.4e-11 Score=115.78 Aligned_cols=84 Identities=33% Similarity=0.431 Sum_probs=72.2
Q ss_pred ccccCCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCC--CCceEEEE
Q 017003 258 LELKPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK--ETQSLIFE 331 (379)
Q Consensus 258 l~~~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~--~~~~L~i~ 331 (379)
.|.+..|.|+|+|++|++|+.+|..|.+||||++++.+ ..+++|+++++++||.|||+|.|.+... ....|.++
T Consensus 146 ~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~ 225 (296)
T 1dqv_A 146 CYLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIA 225 (296)
T ss_dssp EEETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCE
T ss_pred EeccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEE
Confidence 34567899999999999999999999999999999862 2578999999999999999999988643 24579999
Q ss_pred EEEcccCCCC
Q 017003 332 VYIFLLFFPA 341 (379)
Q Consensus 332 V~D~d~~~~d 341 (379)
|||+|.+++|
T Consensus 226 V~d~d~~~~~ 235 (296)
T 1dqv_A 226 VVDYDCIGHN 235 (296)
T ss_dssp EEECCSSSCC
T ss_pred EEeCCCCCCC
Confidence 9999998765
No 45
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.10 E-value=2.9e-10 Score=118.73 Aligned_cols=93 Identities=30% Similarity=0.501 Sum_probs=79.7
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcC----eeeEeeeccCCCCCCeEeeEEEEEecCC-CCceEEEEEEEcc
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----LFKVKTNVVDNNLNPVWNQTFELIAEDK-ETQSLIFEVYIFL 336 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~~~~~T~v~~~tlnP~Wne~f~f~v~~~-~~~~L~i~V~D~d 336 (379)
..+.|.|++.+|++|.++|..|.+|||+++++.+ ..+++|+++++++||.|||+|.|.+... ....|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 4789999999999999999999999999999843 2578999999999999999999998643 2456999999999
Q ss_pred cCCCC-------------------cEEEcccCCCCce
Q 017003 337 LFFPA-------------------QWVPILNSEYGAA 354 (379)
Q Consensus 337 ~~~~d-------------------~w~~L~~~~~g~~ 354 (379)
.+++| .|++|++..+|+.
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~~~~w~~Lls~~~g~~ 286 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAGVDGWFKLLSQEEGEY 286 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCCEEEEEECBCTTGGGT
T ss_pred cccccccccccccchhhhccCCcccceeeccccccee
Confidence 98775 6999987766653
No 46
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.06 E-value=9.5e-12 Score=124.81 Aligned_cols=69 Identities=14% Similarity=0.255 Sum_probs=10.3
Q ss_pred cCCcEEEEEEeecccccccccCCCCCcEEEEEEcCeeeEeeeccCCC---CCCeEeeEEEEEecCCCCceEEEEEEEc
Q 017003 261 KPQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFKVKTNVVDNN---LNPVWNQTFELIAEDKETQSLIFEVYIF 335 (379)
Q Consensus 261 ~~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~~~T~v~~~t---lnP~Wne~f~f~v~~~~~~~L~i~V~D~ 335 (379)
+..|.|+|+|++|++|+++| ||||++++++....||++++++ +||.|||+|.|.+... .+.|.++|||+
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC--------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 45789999999999999876 9999999987557799999999 9999999999986543 57899999994
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.85 E-value=1.3e-08 Score=107.14 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=75.0
Q ss_pred CcEEEEEEeecccccccccCCCCCcEEEEEEcC----e--eeEeeeccCC-CCCCeEeeE-EEEE-ecCCCCceEEEEEE
Q 017003 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP----L--FKVKTNVVDN-NLNPVWNQT-FELI-AEDKETQSLIFEVY 333 (379)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~----~--~~~~T~v~~~-tlnP~Wne~-f~f~-v~~~~~~~L~i~V~ 333 (379)
.+.|+|+|++|++|+. ..+||||++.+.+ . .+++|+++++ ++||+|||+ |.|. +..++...|.++||
T Consensus 649 ~~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSD----KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCS----SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCC----CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 3689999999999975 3689999999854 1 4679999875 699999998 9998 76655678999999
Q ss_pred EcccCCCC----------------cEEEcccCCCCceeeEEEEEEEEEEee
Q 017003 334 IFLLFFPA----------------QWVPILNSEYGAALSNMHLIYIYKYLR 368 (379)
Q Consensus 334 D~d~~~~d----------------~w~~L~~~~~g~~~g~i~l~~~~~~~~ 368 (379)
|+| .| .++||.+ ..|+..+.-.|.++....+
T Consensus 725 D~d---ddfiG~~~ipL~~L~~GyR~vpL~~-~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN---GKFIGHRVMPLDGIKPGYRHVPLRN-ESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT---SCEEEEEEEESTTCCCEEEEEEEEC-TTSCEEEEEEEEEEEEEEE
T ss_pred ecC---CCeeeEEEEEHHHcCCcceEEEEeC-CCCCCCCceEEEEEEEEEe
Confidence 986 22 6888874 4666665555555555443
No 48
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.83 E-value=1.1e-08 Score=107.97 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=73.0
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcC-----eeeEeee-ccC-CCCCCeEee-EEEE-EecCCCCceEEEEE
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTN-VVD-NNLNPVWNQ-TFEL-IAEDKETQSLIFEV 332 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~-----~~~~~T~-v~~-~tlnP~Wne-~f~f-~v~~~~~~~L~i~V 332 (379)
..|.|+|+|++|++|+. +.+||||++.+.+ .++++|+ +++ +++||+||| +|.| .+..++...|.++|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 35789999999999985 4689999999842 1367899 776 569999999 6999 78666566899999
Q ss_pred EEcccCCCC----------------cEEEcccCCCCceeeEEEEEEEEEE
Q 017003 333 YIFLLFFPA----------------QWVPILNSEYGAALSNMHLIYIYKY 366 (379)
Q Consensus 333 ~D~d~~~~d----------------~w~~L~~~~~g~~~g~i~l~~~~~~ 366 (379)
||+| .| .|++|.+. .|+......|.+++.+
T Consensus 752 ~D~d---~d~iG~~~ipl~~L~~G~r~v~L~~~-~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG---NKFLGHRIIPINALNSGYHHLCLHSE-SNMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT---TEEEEEEEEEGGGBCCEEEEEEEECT-TCCEEEEEEEEEEEEE
T ss_pred EEeC---CCccceEeeehhhcCCCcEEEeccCC-CCCCCCceEEEEEEEE
Confidence 9996 22 68888744 4554444555555544
No 49
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.79 E-value=1.6e-08 Score=107.02 Aligned_cols=96 Identities=19% Similarity=0.227 Sum_probs=70.9
Q ss_pred cEEEEEEeecccccccccCCCCCcEEEEEEcC-----eeeEeeeccCC-CCCCeEee-EEEEE-ecCCCCceEEEEEEEc
Q 017003 264 GKVAVTIVKANNLKNMEMIGKSDPYAVVHIKP-----LFKVKTNVVDN-NLNPVWNQ-TFELI-AEDKETQSLIFEVYIF 335 (379)
Q Consensus 264 g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~-----~~~~~T~v~~~-tlnP~Wne-~f~f~-v~~~~~~~L~i~V~D~ 335 (379)
..|+|+|++|++|+. ..+||||++.+.+ ..+++|+++++ ++||+||| +|.|. +..++...|.++|||+
T Consensus 725 ~~L~V~Visaq~L~~----~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSD----RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCS----SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCcc----cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 479999999999985 3689999999854 13579999875 59999999 69998 7655567899999999
Q ss_pred ccCCCC----------------cEEEcccCCCCceeeEEEEEEEEEEe
Q 017003 336 LLFFPA----------------QWVPILNSEYGAALSNMHLIYIYKYL 367 (379)
Q Consensus 336 d~~~~d----------------~w~~L~~~~~g~~~g~i~l~~~~~~~ 367 (379)
| .| .++||.+. .|+....-.|.++..+.
T Consensus 801 d---ddfiG~~~lpL~~L~~GyR~vpL~~~-~g~~l~~atLfv~i~~~ 844 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSGYHYVCLRNE-ANQPLCLPALLIYTEAS 844 (885)
T ss_dssp T---TEEEEEEEEETTTCCCEEEEEEEECT-TSCEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCCceEEEecCC-CCCccCceEEEEEEEEE
Confidence 7 22 67888644 55553333444444433
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.24 E-value=1.1e-05 Score=64.56 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=52.0
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEEcCeee---Eee-eccCCCCCCeEeeEEEEEecCCCCceEEEEEEEcc
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHIKPLFK---VKT-NVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFL 336 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~~~~~~---~~T-~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d 336 (379)
..+.|+|...++.--.-+......||||.+.+..... .+| ..+++|.+|.|||+|.-.+++ ++.|.+.|++..
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 80 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAA 80 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEET
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCC
Confidence 4567888886654321111223579999999876322 255 677889999999999998876 688999999643
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.08 E-value=1.2e-05 Score=65.21 Aligned_cols=73 Identities=12% Similarity=0.107 Sum_probs=52.7
Q ss_pred CCcEEEEEEeecccccccc-cCCCCCcEEEEEEcCeee---Eee-eccCCCCCCeEeeEEEEEecCCCCceEEEEEEEcc
Q 017003 262 PQGKVAVTIVKANNLKNME-MIGKSDPYAVVHIKPLFK---VKT-NVVDNNLNPVWNQTFELIAEDKETQSLIFEVYIFL 336 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d-~~g~sdPyv~v~~~~~~~---~~T-~v~~~tlnP~Wne~f~f~v~~~~~~~L~i~V~D~d 336 (379)
..+.|+|...++.--+-.. .....||||.+.+..... .+| ..+++|..|.|||+|.-.+++ ++.|.+.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 4677888887765432221 122579999999876323 666 666779999999999988875 688999999543
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=89.69 E-value=5.2 Score=34.95 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=45.4
Q ss_pred eeEeeeccCCCCCCeEeeEEEEEecC--CCCceEEEEEEEcccCC-CC--------cEEEcccCCCCc--eeeEEEEEEE
Q 017003 297 FKVKTNVVDNNLNPVWNQTFELIAED--KETQSLIFEVYIFLLFF-PA--------QWVPILNSEYGA--ALSNMHLIYI 363 (379)
Q Consensus 297 ~~~~T~v~~~tlnP~Wne~f~f~v~~--~~~~~L~i~V~D~d~~~-~d--------~w~~L~~~~~g~--~~g~i~l~~~ 363 (379)
..++|.+...+.+|.|+|++.+.+.. .....|.+++++.-.-. +| .|+||.+.. |. ..|.=.|.+
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~~d-G~~L~DG~H~L~v- 154 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMRYD-GTTLRDGEHDLIV- 154 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBCTT-SCBCCSEEEEEEE-
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcccCC-CcEEccCCEEEEE-
Confidence 45788888889999999999888753 34667999998654321 22 699998543 33 345444433
Q ss_pred EE
Q 017003 364 YK 365 (379)
Q Consensus 364 ~~ 365 (379)
||
T Consensus 155 yk 156 (220)
T 3l4c_A 155 YK 156 (220)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 53
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=84.60 E-value=0.92 Score=28.09 Aligned_cols=24 Identities=33% Similarity=0.581 Sum_probs=17.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHh
Q 017003 2 GLISGVFMGMIFGIALMAGWRHMM 25 (379)
Q Consensus 2 ~~~~g~~~g~~~~l~l~~~~~~~~ 25 (379)
|-|+|.++|.+.|++++.+..+++
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeeeehHHHHHHHHHHHHHHHH
Confidence 347888899988888777655444
No 54
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=72.76 E-value=3.2 Score=26.49 Aligned_cols=24 Identities=21% Similarity=0.393 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhh
Q 017003 5 SGVFMGMIFGIALMAGWRHMMRYR 28 (379)
Q Consensus 5 ~g~~~g~~~~l~l~~~~~~~~~~~ 28 (379)
.|.+-|++...++...+..++++|
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eehhHHHHHHHHHHHHHHHHhhhh
Confidence 344445555444444444444333
No 55
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=68.88 E-value=17 Score=38.81 Aligned_cols=72 Identities=15% Similarity=0.264 Sum_probs=49.0
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEE--cCe---eeEeeeccCCCCCCeEeeEEEEEe--cC-CCCceEEEEEE
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPL---FKVKTNVVDNNLNPVWNQTFELIA--ED-KETQSLIFEVY 333 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~--~~~---~~~~T~v~~~tlnP~Wne~f~f~v--~~-~~~~~L~i~V~ 333 (379)
-...++|+|.++.++... ..++-|+.+.+ |.. ....|+.+.-..+|.|||...|.+ .+ +....|.+++|
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 457899999999988653 34677877654 431 223454444467899999988876 33 45778999999
Q ss_pred Ecc
Q 017003 334 IFL 336 (379)
Q Consensus 334 D~d 336 (379)
+..
T Consensus 292 ~~~ 294 (940)
T 2wxf_A 292 AVV 294 (940)
T ss_dssp EEC
T ss_pred Eec
Confidence 963
No 56
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=63.87 E-value=5.3 Score=25.48 Aligned_cols=22 Identities=18% Similarity=0.276 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 017003 6 GVFMGMIFGIALMAGWRHMMRY 27 (379)
Q Consensus 6 g~~~g~~~~l~l~~~~~~~~~~ 27 (379)
|.+-|++...++...+..++++
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred eehHHHHHHHHHHHHHHHHhhh
Confidence 3333344433444444444433
No 57
>1ewf_A BPI, bactericidal/permeability-increasing protein; lipid-binding, lipopolysaccharide-binding, antibiotic; HET: PC1; 1.70A {Homo sapiens} SCOP: d.83.1.1 d.83.1.1 PDB: 1bp1_A*
Probab=61.55 E-value=1.1e+02 Score=29.25 Aligned_cols=21 Identities=0% Similarity=0.169 Sum_probs=14.3
Q ss_pred eeEEEEEEEEEEEEEEEEEEE
Q 017003 162 ASIPIQLKDLQVFTVIRVIFQ 182 (379)
Q Consensus 162 ~~~~v~v~~~~~~g~~Rv~l~ 182 (379)
-.+.+.++++.+++.+|+...
T Consensus 102 G~~~~~v~~v~i~~~~~l~~~ 122 (456)
T 1ewf_A 102 GNFDLSIEGMSISADLKLGSN 122 (456)
T ss_dssp EEEEEEEEEEEEEEEEEEEEE
T ss_pred eEEEEEEeeEEEEEEEEEeec
Confidence 345666777777777777654
No 58
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=61.32 E-value=68 Score=34.72 Aligned_cols=74 Identities=18% Similarity=0.126 Sum_probs=49.4
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEEEE--cCe---eeEeeeccCCCCCCeEeeEEEEEe--cC-CCCceEEEEEE
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPL---FKVKTNVVDNNLNPVWNQTFELIA--ED-KETQSLIFEVY 333 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~--~~~---~~~~T~v~~~tlnP~Wne~f~f~v--~~-~~~~~L~i~V~ 333 (379)
-...++|+|.++.++.... ....+-||.+.+ |.. ...+|+.+ ...+|.|||...|.+ .+ +....|.++||
T Consensus 353 ~~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~ 430 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLSIC 430 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEEEC
T ss_pred CCCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEEEE
Confidence 4568899999998875322 234567887766 331 22344433 345788999988876 33 45778999999
Q ss_pred Eccc
Q 017003 334 IFLL 337 (379)
Q Consensus 334 D~d~ 337 (379)
+...
T Consensus 431 ~~~~ 434 (1091)
T 3hhm_A 431 SVKG 434 (1091)
T ss_dssp CCCC
T ss_pred EecC
Confidence 8654
No 59
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=60.29 E-value=7.4 Score=24.77 Aligned_cols=22 Identities=14% Similarity=0.323 Sum_probs=10.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 017003 4 ISGVFMGMIFGIALMAGWRHMM 25 (379)
Q Consensus 4 ~~g~~~g~~~~l~l~~~~~~~~ 25 (379)
++|.+.|+++.+.+...+..+.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~ 35 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILI 35 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhe
Confidence 5566666444444444444444
No 60
>1q90_G Cytochrome B6F complex subunit PETG; membrane protein complex, photosynthesis, electron transfer, oxydoreductase, chlorophyll; HET: HEM CL1 BCR TDS SQD LFA LMG; 3.10A {Chlamydomonas reinhardtii} SCOP: f.23.26.1
Probab=52.97 E-value=18 Score=21.85 Aligned_cols=10 Identities=30% Similarity=1.065 Sum_probs=6.0
Q ss_pred chhHHHHHHH
Q 017003 3 LISGVFMGMI 12 (379)
Q Consensus 3 ~~~g~~~g~~ 12 (379)
+++|+++|++
T Consensus 5 lL~GIVlGli 14 (37)
T 1q90_G 5 LLCGIVLGLV 14 (37)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhHHHhhH
Confidence 4556666665
No 61
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=46.53 E-value=25 Score=25.31 Aligned_cols=19 Identities=21% Similarity=0.597 Sum_probs=10.4
Q ss_pred hhHHHHHHH-HHHHHHHHHH
Q 017003 4 ISGVFMGMI-FGIALMAGWR 22 (379)
Q Consensus 4 ~~g~~~g~~-~~l~l~~~~~ 22 (379)
+.|.+.|++ +|+++++.|+
T Consensus 14 v~gvi~gilliGllllliwk 33 (79)
T 2knc_B 14 LLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 345555543 5666666665
No 62
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=42.76 E-value=17 Score=39.35 Aligned_cols=71 Identities=20% Similarity=0.276 Sum_probs=48.8
Q ss_pred CCcEEEEEEeecccccccccCCCCCcEEEE--EEcCe---eeEeeeccCCCCCCeEeeEEEEEe--cC-CCCceEEEEEE
Q 017003 262 PQGKVAVTIVKANNLKNMEMIGKSDPYAVV--HIKPL---FKVKTNVVDNNLNPVWNQTFELIA--ED-KETQSLIFEVY 333 (379)
Q Consensus 262 ~~g~L~V~V~~A~~L~~~d~~g~sdPyv~v--~~~~~---~~~~T~v~~~tlnP~Wne~f~f~v--~~-~~~~~L~i~V~ 333 (379)
-...++|+|.++.++... ..++-|+.+ +-|.. ....|+.+.-+.+|.|||...|.+ .+ +....|.+++|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 457899999999988653 346677664 34541 123344444467899999988876 33 45678999999
Q ss_pred Ec
Q 017003 334 IF 335 (379)
Q Consensus 334 D~ 335 (379)
+.
T Consensus 428 ~~ 429 (1092)
T 2y3a_A 428 AV 429 (1092)
T ss_dssp CC
T ss_pred Ee
Confidence 86
No 63
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=41.35 E-value=17 Score=23.14 Aligned_cols=24 Identities=4% Similarity=0.149 Sum_probs=12.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhh
Q 017003 3 LISGVFMGMIFGIALMAGWRHMMR 26 (379)
Q Consensus 3 ~~~g~~~g~~~~l~l~~~~~~~~~ 26 (379)
.+.|+++-.++++++++++++...
T Consensus 17 VVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHHHHHHhhhhHh
Confidence 345555444555555555555433
No 64
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=38.70 E-value=18 Score=22.96 Aligned_cols=22 Identities=27% Similarity=0.469 Sum_probs=10.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 017003 4 ISGVFMGMIFGIALMAGWRHMM 25 (379)
Q Consensus 4 ~~g~~~g~~~~l~l~~~~~~~~ 25 (379)
+.|++.-.+++++++++|++..
T Consensus 17 VgGv~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 17 IGGLFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhhhhh
Confidence 4455544444444455555543
No 65
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=37.99 E-value=36 Score=20.11 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=16.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHH
Q 017003 2 GLISGVFMGMIFGIALMAGWRHM 24 (379)
Q Consensus 2 ~~~~g~~~g~~~~l~l~~~~~~~ 24 (379)
|-++|+++|-+.+.+++....++
T Consensus 7 gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 7 GVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEeEeHHHHHHHHHHHHHHhh
Confidence 44788898888777776654444
No 66
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=37.61 E-value=97 Score=33.12 Aligned_cols=73 Identities=15% Similarity=0.113 Sum_probs=44.9
Q ss_pred CcEEEEEEeecccccccccCCCCCcEEEEEE--cCe--eeEeeeccCCCCCCeEeeEEEEEe--cC-CCCceEEEEEEEc
Q 017003 263 QGKVAVTIVKANNLKNMEMIGKSDPYAVVHI--KPL--FKVKTNVVDNNLNPVWNQTFELIA--ED-KETQSLIFEVYIF 335 (379)
Q Consensus 263 ~g~L~V~V~~A~~L~~~d~~g~sdPyv~v~~--~~~--~~~~T~v~~~tlnP~Wne~f~f~v--~~-~~~~~L~i~V~D~ 335 (379)
...++|+|.++......+ ...++-||.+.+ |.. ...+|+.+.-+.+|.|||...|.+ .+ +....|.+++|+.
T Consensus 217 ~~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~ 295 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCG 295 (961)
T ss_dssp CSEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEE
T ss_pred cCceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEec
Confidence 457888888876421111 123566776543 441 123444444456799999988766 33 4577899999985
Q ss_pred c
Q 017003 336 L 336 (379)
Q Consensus 336 d 336 (379)
.
T Consensus 296 ~ 296 (961)
T 1e7u_A 296 A 296 (961)
T ss_dssp E
T ss_pred c
Confidence 4
No 67
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=23.47 E-value=81 Score=19.71 Aligned_cols=21 Identities=19% Similarity=0.550 Sum_probs=13.0
Q ss_pred hHHHHHHH-HHHHHHHHHHHHh
Q 017003 5 SGVFMGMI-FGIALMAGWRHMM 25 (379)
Q Consensus 5 ~g~~~g~~-~~l~l~~~~~~~~ 25 (379)
.|.+.|++ +|++++..|+...
T Consensus 14 ~gvi~~ivliGl~lLliwk~~~ 35 (43)
T 2k9j_B 14 LSVMGAILLIGLAALLIWKLLI 35 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 35555533 6777777777664
No 68
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=22.46 E-value=43 Score=23.14 Aligned_cols=14 Identities=29% Similarity=0.702 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHH
Q 017003 7 VFMGMIFGIALMAG 20 (379)
Q Consensus 7 ~~~g~~~~l~l~~~ 20 (379)
+++|-++|++++++
T Consensus 12 ivlGg~~~lll~~g 25 (70)
T 2klu_A 12 IVLGGVAGLLLFIG 25 (70)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH
Confidence 45666666666554
No 69
>1vf5_G Protein PET G; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.23.26.1 PDB: 2d2c_G* 2e74_G* 2e75_G* 2e76_G* 2zt9_G*
Probab=21.61 E-value=57 Score=19.65 Aligned_cols=10 Identities=30% Similarity=1.036 Sum_probs=3.4
Q ss_pred chhHHHHHHH
Q 017003 3 LISGVFMGMI 12 (379)
Q Consensus 3 ~~~g~~~g~~ 12 (379)
+++|+++|++
T Consensus 5 lL~GIVlGli 14 (37)
T 1vf5_G 5 LLDGLVLGLV 14 (37)
T ss_dssp ----CHHHHH
T ss_pred hhhhHHHhhH
Confidence 3455555554
No 70
>2obd_A Cholesteryl ester transfer protein; lipid transfer protein, lipid transport; HET: NDG FU4 2OB PCW EPE 1PE PG4; 2.10A {Homo sapiens}
Probab=20.91 E-value=5.5e+02 Score=24.50 Aligned_cols=18 Identities=11% Similarity=0.250 Sum_probs=12.3
Q ss_pred eEEEEEE-EEEEEEEEEEE
Q 017003 163 SIPIQLK-DLQVFTVIRVI 180 (379)
Q Consensus 163 ~~~v~v~-~~~~~g~~Rv~ 180 (379)
.+.+.++ ++.+++.+++.
T Consensus 112 ~~~~~v~~gv~i~~~~~L~ 130 (476)
T 2obd_A 112 SIDFEIDSAIDLQINTQLT 130 (476)
T ss_dssp EEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEecCEEEEEEEEEe
Confidence 3556666 77777777776
No 71
>1pi7_A VPU protein, U ORF protein; alpha helix, viral protein; NMR {Human immunodeficiency virus 1} SCOP: j.35.1.1 PDB: 1pi8_A 1pje_A 2gof_A 2goh_A 2jpx_A
Probab=20.81 E-value=1.1e+02 Score=18.38 Aligned_cols=14 Identities=14% Similarity=0.442 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHH
Q 017003 6 GVFMGMIFGIALMA 19 (379)
Q Consensus 6 g~~~g~~~~l~l~~ 19 (379)
|++.+++..+.+|.
T Consensus 10 alivalIiaIVVWt 23 (36)
T 1pi7_A 10 ALVVAIIIAIVVWS 23 (36)
T ss_pred HHHHHHHHHHHHHH
Confidence 44444444444444
No 72
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.61 E-value=1.3e+02 Score=21.50 Aligned_cols=17 Identities=6% Similarity=0.442 Sum_probs=7.8
Q ss_pred cchhHHH-HHHHHHHHHHH
Q 017003 2 GLISGVF-MGMIFGIALMA 19 (379)
Q Consensus 2 ~~~~g~~-~g~~~~l~l~~ 19 (379)
|.++|++ +|+++ ++++-
T Consensus 16 gvi~gilliGlll-lliwk 33 (79)
T 2knc_B 16 SVMGAILLIGLAA-LLIWK 33 (79)
T ss_dssp HHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHH-HHHHH
Confidence 4455655 44443 33443
Done!