BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017009
(379 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297735238|emb|CBI17600.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/374 (91%), Positives = 362/374 (96%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LR+DVEA S+R EEIRASAGLQQLE+ELA LEMKAADSSFWD+RA+AQETL AL
Sbjct: 75 MQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLAL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LLTDFKT+++DA TIVKLTEEMDS D GLLEEAA+IIKELNKALD+FELTQL
Sbjct: 135 TDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS+GEEAGIKS
Sbjct: 195 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKS 254
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG EVMPLLPEESMDV+IPEE
Sbjct: 255 ATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEE 314
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV
Sbjct: 315 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 374
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSDI SVMDGELEPF
Sbjct: 375 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPF 434
Query: 361 IKSYLKYKYSMSLS 374
IK+YLK+K+SM+LS
Sbjct: 435 IKAYLKFKFSMTLS 448
>gi|225430898|ref|XP_002276037.1| PREDICTED: peptide chain release factor 2 [Vitis vinifera]
Length = 454
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/374 (91%), Positives = 362/374 (96%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LR+DVEA S+R EEIRASAGLQQLE+ELA LEMKAADSSFWD+RA+AQETL AL
Sbjct: 78 MQDFYTLRRDVEAISERAEEIRASAGLQQLEEELAALEMKAADSSFWDDRAKAQETLLAL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LLTDFKT+++DA TIVKLTEEMDS D GLLEEAA+IIKELNKALD+FELTQL
Sbjct: 138 TDVKDKIKLLTDFKTQVEDAETIVKLTEEMDSIDTGLLEEAANIIKELNKALDRFELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS+GEEAGIKS
Sbjct: 198 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSMGEEAGIKS 257
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG EVMPLLPEESMDV+IPEE
Sbjct: 258 ATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPEESMDVEIPEE 317
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV
Sbjct: 318 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 377
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSDI SVMDGELEPF
Sbjct: 378 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDITSVMDGELEPF 437
Query: 361 IKSYLKYKYSMSLS 374
IK+YLK+K+SM+LS
Sbjct: 438 IKAYLKFKFSMTLS 451
>gi|255547508|ref|XP_002514811.1| peptide chain release factor, putative [Ricinus communis]
gi|223545862|gb|EEF47365.1| peptide chain release factor, putative [Ricinus communis]
Length = 458
Score = 696 bits (1796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/376 (89%), Positives = 360/376 (95%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY+LR+DVEAAS+RVEEIR SAGLQQLE+E+ LE KAA++SFWD+RA AQETL AL
Sbjct: 83 MQDFYSLRRDVEAASERVEEIRTSAGLQQLEQEVTNLESKAANTSFWDDRATAQETLLAL 142
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LLT+FKTK++DA TIVKLTEEMDS D GLLEEA+SIIKELNK+L++FELTQL
Sbjct: 143 TDVKDKIKLLTEFKTKVEDAETIVKLTEEMDSIDTGLLEEASSIIKELNKSLERFELTQL 202
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKE AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 203 LSGPYDKESAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 262
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A+IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG EVMPLLPEESMDV++PEE
Sbjct: 263 AMIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGIEVMPLLPEESMDVELPEE 322
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV
Sbjct: 323 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 382
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSD+ SVMDGELE F
Sbjct: 383 IAVEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDVTSVMDGELEAF 442
Query: 361 IKSYLKYKYSMSLSAS 376
IK+YLKYKYSM+LS++
Sbjct: 443 IKAYLKYKYSMTLSST 458
>gi|224101237|ref|XP_002312196.1| predicted protein [Populus trichocarpa]
gi|222852016|gb|EEE89563.1| predicted protein [Populus trichocarpa]
Length = 379
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/379 (87%), Positives = 359/379 (94%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY+LRKDVE AS RVEE+RAS+GL LE+ELA+LE KAADSS WD+RA+AQETL AL
Sbjct: 1 MQDFYSLRKDVETASQRVEEMRASSGLHLLEQELADLESKAADSSLWDDRAKAQETLLAL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
TDVKDKI LL +FKTK+++A TIVKLTEEMDSTDAG LEEA IIKELNKALD++ELTQL
Sbjct: 61 TDVKDKIKLLAEFKTKVEEAETIVKLTEEMDSTDAGFLEEATGIIKELNKALDKYELTQL 120
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAV+SITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT+VVE S GEEAGIKS
Sbjct: 121 LSGPYDKEGAVLSITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTKVVESSPGEEAGIKS 180
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +EVEGRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLPEESMDV++PEE
Sbjct: 181 ATVEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESMDVELPEE 240
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEIS SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL+NKIKALSRLKAKLLV
Sbjct: 241 DLEISTSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLSNKIKALSRLKAKLLV 300
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDI SVMDGEL+PF
Sbjct: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIASVMDGELDPF 360
Query: 361 IKSYLKYKYSMSLSASDAN 379
I++YLK+KYSM+LSAS+ N
Sbjct: 361 IRAYLKHKYSMTLSASEPN 379
>gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus]
Length = 453
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/376 (86%), Positives = 357/376 (94%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
QDFY LRK+VE S+RVEEIR SAGL QL++ELA+LE KAAD+SFWD+R++AQ+ L A+T
Sbjct: 78 QDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMAMT 137
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
DVKDKI +LTDFKT++++A TIVKLTEEMDS D GLLEEA IIK+LNKALDQFEL++LL
Sbjct: 138 DVKDKIKMLTDFKTQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSELL 197
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
SGPYDKEGAVISI+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKSA
Sbjct: 198 SGPYDKEGAVISISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSA 257
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
IE+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLP+ESM+V++PEED
Sbjct: 258 TIEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEED 317
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI
Sbjct: 318 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 377
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSDIVSVMDGELEPFI
Sbjct: 378 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFI 437
Query: 362 KSYLKYKYSMSLSASD 377
K+YLKYKYS++LS D
Sbjct: 438 KAYLKYKYSIALSTGD 453
>gi|356531868|ref|XP_003534498.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
Length = 456
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/379 (86%), Positives = 352/379 (92%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY+LRKDVE S RV EIR S+GLQ LE+EL LE +AADSSFWDNR +AQETL L
Sbjct: 78 LQDFYSLRKDVEIMSQRVGEIRESSGLQLLEQELGNLEEQAADSSFWDNRGKAQETLSTL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
DVKDKI LL DFKT+++DA TIV LTEEMDS D GL EEA+++IKELNK++D++ELTQL
Sbjct: 138 ADVKDKIKLLNDFKTQVEDAETIVSLTEEMDSIDRGLFEEASNLIKELNKSIDRYELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMY+RWGEKQ+YKTRVVEKS GEEAGIKS
Sbjct: 198 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYMRWGEKQKYKTRVVEKSPGEEAGIKS 257
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG EVMPLLP+ESM+V+IPEE
Sbjct: 258 ATIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGVEVMPLLPDESMNVEIPEE 317
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKI+ALSRLKAKLLV
Sbjct: 318 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIRALSRLKAKLLV 377
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHET+DI SVMDGEL+PF
Sbjct: 378 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETTDITSVMDGELDPF 437
Query: 361 IKSYLKYKYSMSLSASDAN 379
IKSYLK+KY+MSLS S N
Sbjct: 438 IKSYLKHKYNMSLSTSGVN 456
>gi|357507841|ref|XP_003624209.1| Peptide chain release factor [Medicago truncatula]
gi|355499224|gb|AES80427.1| Peptide chain release factor [Medicago truncatula]
Length = 475
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/379 (84%), Positives = 354/379 (93%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY+LRKDVE AS RV+EIR S+GLQ LE+ELA+LE +A+ SSFWD+RA+AQ+TL L
Sbjct: 97 LQDFYSLRKDVEIASQRVKEIRESSGLQLLEQELAKLEEEASCSSFWDDRAKAQQTLSTL 156
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
DVK+KI LL D+KT+++DA TIV LTEEM+S D GL EEA+S+IKELNK++D+FELTQL
Sbjct: 157 ADVKEKIKLLNDYKTQVEDAETIVMLTEEMESVDKGLYEEASSLIKELNKSIDRFELTQL 216
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS
Sbjct: 217 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 276
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IEVEGRYAYGYLSGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLPEES++V+IPEE
Sbjct: 277 ATIEVEGRYAYGYLSGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEESLNVEIPEE 336
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT+RCTEERSQLANKIKALSRLKAKLLV
Sbjct: 337 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLKAKLLV 396
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRA+E KQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTGHET DI SV+DGEL+PF
Sbjct: 397 IAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGHETPDITSVIDGELDPF 456
Query: 361 IKSYLKYKYSMSLSASDAN 379
IKSYLK+KYSM++S S N
Sbjct: 457 IKSYLKHKYSMTMSTSGVN 475
>gi|297805172|ref|XP_002870470.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
gi|297316306|gb|EFH46729.1| HCF109 [Arabidopsis lyrata subsp. lyrata]
Length = 453
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/379 (81%), Positives = 351/379 (92%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASAGL+QLE+E+A LE KA D+SFWD+R +AQETL AL
Sbjct: 75 MQDFYTLRKDVEIASARVEEIRASAGLEQLEQEIANLESKATDTSFWDDRTKAQETLSAL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 135 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDRFELTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAV+ ITAGAGGTDAQDWADMLLRMY+RWGEKQRYKT+VVE S GEEAGIKS
Sbjct: 195 LSGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKS 254
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLPEE++ ++IPEE
Sbjct: 255 ATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEE 314
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV VRCTEERSQLANK +AL RLKAKLLV
Sbjct: 315 DLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLLV 374
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRA+EIK+IRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDI SVMDG+L+PF
Sbjct: 375 IAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPF 434
Query: 361 IKSYLKYKYSMSLSASDAN 379
IK+YLK+KY+++++++ N
Sbjct: 435 IKAYLKHKYTLAMASAVTN 453
>gi|30692908|ref|NP_851096.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|8777302|dbj|BAA96892.1| translation releasing factor RF-2 [Arabidopsis thaliana]
gi|15810391|gb|AAL07083.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
gi|21436317|gb|AAM51328.1| putative translation releasing factor RF-2 [Arabidopsis thaliana]
gi|21536944|gb|AAM61285.1| translation releasing factor RF-2 [Arabidopsis thaliana]
gi|332006668|gb|AED94051.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 456
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/379 (80%), Positives = 349/379 (92%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASA LQQLE+E+ LE KA D+SFWD+R +AQETL +L
Sbjct: 78 MQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 138 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAV+ ITAGAGGTDAQDWADMLLRMY+RWGEKQRYKT+VVE S GEEAGIKS
Sbjct: 198 LSGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKS 257
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLPEE++ ++IPEE
Sbjct: 258 ATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEE 317
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV VRCTEERSQLANK +AL RLKAKL+V
Sbjct: 318 DLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMV 377
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRA+EIK+IRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDI SVMDG+L+PF
Sbjct: 378 IAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPF 437
Query: 361 IKSYLKYKYSMSLSASDAN 379
IK+YLK+KY+++++++ N
Sbjct: 438 IKAYLKHKYTLAMASAVTN 456
>gi|30692913|ref|NP_851097.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|13568392|emb|CAC36322.1| translation releasing factor2 [Arabidopsis thaliana]
gi|332006670|gb|AED94053.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 455
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/379 (80%), Positives = 349/379 (92%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASA LQQLE+E+ LE KA D+SFWD+R +AQETL +L
Sbjct: 77 MQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSL 136
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 137 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQL 196
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAV+ ITAGAGGTDAQDWADMLLRMY+RWGEKQRYKT+VVE S GEEAGIKS
Sbjct: 197 LSGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKS 256
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLPEE++ ++IPEE
Sbjct: 257 ATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEE 316
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV VRCTEERSQLANK +AL RLKAKL+V
Sbjct: 317 DLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMV 376
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRA+EIK+IRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDI SVMDG+L+PF
Sbjct: 377 IAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDGDLDPF 436
Query: 361 IKSYLKYKYSMSLSASDAN 379
IK+YLK+KY+++++++ N
Sbjct: 437 IKAYLKHKYTLAMASAVTN 455
>gi|449442779|ref|XP_004139158.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
Length = 450
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/377 (83%), Positives = 347/377 (92%), Gaps = 3/377 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRK+VE S+RVEEIR SAGL QL++ELA+LE KAAD+SFWD+R++AQ+ L +
Sbjct: 77 MQDFYTLRKEVETTSERVEEIRNSAGLLQLDQELADLESKAADNSFWDDRSKAQKVLMGV 136
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ + + + ++++A TIVKLTEEMDS D GLLEEA IIK+LNKALDQFEL++L
Sbjct: 137 V-ILECVGCV--MMIQVEEAETIVKLTEEMDSVDVGLLEEATKIIKDLNKALDQFELSEL 193
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVISI+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 194 LSGPYDKEGAVISISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKS 253
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IE+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLP+ESM+V++PEE
Sbjct: 254 ATIEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEE 313
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV
Sbjct: 314 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 373
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG+ETSDIVSVMDGELEPF
Sbjct: 374 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPF 433
Query: 361 IKSYLKYKYSMSLSASD 377
IK+YLKYKYS++LS D
Sbjct: 434 IKAYLKYKYSIALSTGD 450
>gi|115472651|ref|NP_001059924.1| Os07g0546600 [Oryza sativa Japonica Group]
gi|33146529|dbj|BAC79675.1| putative translation releasing factor2 [Oryza sativa Japonica
Group]
gi|113611460|dbj|BAF21838.1| Os07g0546600 [Oryza sativa Japonica Group]
Length = 460
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/370 (83%), Positives = 336/370 (90%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE A RV E+R SAGL QLE+E+A LE K+ADSS WD+ ++AQE L AL
Sbjct: 82 MQDFYALRKDVELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVAL 141
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKD++ LL D K ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 142 TEVKDRVKLLNDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 201
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 202 LSGPYDKEGAVINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 261
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESMDV+IPEE
Sbjct: 262 ATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEE 321
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRCTEERSQLANKIKALSRLKAKLLV
Sbjct: 322 DLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLV 381
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT ETSDI VMDGEL+ F
Sbjct: 382 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTF 441
Query: 361 IKSYLKYKYS 370
I++YLKYK S
Sbjct: 442 IRAYLKYKLS 451
>gi|222637229|gb|EEE67361.1| hypothetical protein OsJ_24645 [Oryza sativa Japonica Group]
Length = 498
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/370 (83%), Positives = 336/370 (90%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE A RV E+R SAGL QLE+E+A LE K+ADSS WD+ ++AQE L AL
Sbjct: 120 MQDFYALRKDVELAVARVSEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVAL 179
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKD++ LL D K ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 180 TEVKDRVKLLNDLKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 239
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 240 LSGPYDKEGAVINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 299
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A IE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESMDV+IPEE
Sbjct: 300 ATIELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEE 359
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRCTEERSQLANKIKALSRLKAKLLV
Sbjct: 360 DLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLV 419
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT ETSDI VMDGEL+ F
Sbjct: 420 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTF 479
Query: 361 IKSYLKYKYS 370
I++YLKYK S
Sbjct: 480 IRAYLKYKLS 489
>gi|125558711|gb|EAZ04247.1| hypothetical protein OsI_26391 [Oryza sativa Indica Group]
Length = 457
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 307/368 (83%), Positives = 335/368 (91%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DFY LRKDVE A RV E+R SAGL QLE+E+A LE K+ADSS WD+ ++AQE L ALT+
Sbjct: 81 DFYALRKDVELALARVGEVRQSAGLDQLEEEIASLEKKSADSSLWDDPSKAQEILVALTE 140
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VKD++ LL D K+++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQLLS
Sbjct: 141 VKDRVKLLNDLKSQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQLLS 200
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
GPYDKEGAVI+ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKSA
Sbjct: 201 GPYDKEGAVINITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKSAT 260
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
IE+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESMDV+IPEEDL
Sbjct: 261 IELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMDVEIPEEDL 320
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
EISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRCTEERSQLANKIKALSRLKAKLLVIA
Sbjct: 321 EISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLKAKLLVIA 380
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT ETSDI VMDGEL+ FI+
Sbjct: 381 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDGELDTFIR 440
Query: 363 SYLKYKYS 370
+YLKYK S
Sbjct: 441 AYLKYKLS 448
>gi|226531101|ref|NP_001152654.1| peptide chain release factor 2 [Zea mays]
gi|195658609|gb|ACG48772.1| peptide chain release factor 2 [Zea mays]
gi|223950205|gb|ACN29186.1| unknown [Zea mays]
gi|414887031|tpg|DAA63045.1| TPA: peptide chain release factor 2 [Zea mays]
Length = 449
Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/375 (80%), Positives = 339/375 (90%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGLQQLE+++A LE K++DSS WD+ ++AQ L +L
Sbjct: 75 LQDFYILRKDVELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKDK+ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 135 TEVKDKVKLLNDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 195 LSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 254
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEE
Sbjct: 255 ATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEE 314
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC+EERSQLANKIKALSRLKAKLLV
Sbjct: 315 DLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLV 374
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA EQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETSDI VMDGEL+PF
Sbjct: 375 IALEQRASEIKQIRGDIVKAEWGQQIRNYVFHPYKLVKDVRTGCETSDITGVMDGELDPF 434
Query: 361 IKSYLKYKYSMSLSA 375
I++YLKYK + + ++
Sbjct: 435 IRAYLKYKLTAAATS 449
>gi|357116694|ref|XP_003560113.1| PREDICTED: peptide chain release factor 2-like [Brachypodium
distachyon]
Length = 459
Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust.
Identities = 297/372 (79%), Positives = 338/372 (90%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE + DRV E+R SAGL+ LE+E+A LE K+ DS+ WD+ ++AQE L AL
Sbjct: 81 MQDFYALRKDVELSVDRVNEVRRSAGLELLEEEIASLEKKSGDSTLWDDPSKAQELLVAL 140
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VK+K+ +L DFK+++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+T L
Sbjct: 141 TEVKEKVKILNDFKSQVEEADTIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTLL 200
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYK+RVVEKS GEEAGIKS
Sbjct: 201 LSGPYDKEGAVITISAGAGGTDAQDWADMLLRMYVRWGEKQRYKSRVVEKSPGEEAGIKS 260
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGR+AYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEES+DV+IPEE
Sbjct: 261 ATVEIEGRFAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESLDVEIPEE 320
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC+EERSQLANKIKAL RLKAKLLV
Sbjct: 321 DLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALRRLKAKLLV 380
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRT ETSDI VMDGEL+PF
Sbjct: 381 IAEEQRASEIKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTACETSDISGVMDGELDPF 440
Query: 361 IKSYLKYKYSMS 372
I++YL+YK S++
Sbjct: 441 IRAYLQYKLSVA 452
>gi|326511439|dbj|BAJ87733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 517
Score = 624 bits (1609), Expect = e-176, Method: Compositional matrix adjust.
Identities = 296/370 (80%), Positives = 336/370 (90%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE A +RV E+R AGL+QL +E+A LE K+ DS+ WD+ ++AQE L AL
Sbjct: 139 MQDFYALRKDVELAVERVNEVRQDAGLEQLLEEIASLENKSGDSTLWDDPSKAQELLVAL 198
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T++K+K+ LL DFK+++++A TIV+LTEE+DS D GLLEEA+ IIK LNKALD FE+T+L
Sbjct: 199 TELKEKVKLLNDFKSQVEEADTIVQLTEELDSIDTGLLEEASKIIKALNKALDNFEMTRL 258
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDK+GAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYK+RVVEKS GEEAGIKS
Sbjct: 259 LSGPYDKDGAVITISAGAGGTDAQDWADMLLRMYVRWGEKQRYKSRVVEKSPGEEAGIKS 318
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEES+DV+IPEE
Sbjct: 319 ATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESLDVEIPEE 378
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+ISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC EERSQLANKIKAL RLKAKLLV
Sbjct: 379 DLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCAEERSQLANKIKALRRLKAKLLV 438
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT ETSDI VMDGEL+PF
Sbjct: 439 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDISGVMDGELDPF 498
Query: 361 IKSYLKYKYS 370
IK+YL+YK S
Sbjct: 499 IKAYLQYKLS 508
>gi|242050470|ref|XP_002462979.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
gi|241926356|gb|EER99500.1| hypothetical protein SORBIDRAFT_02g035755 [Sorghum bicolor]
Length = 363
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 284/347 (81%), Positives = 318/347 (91%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGL+QLE+++A LE K+ADSS WD+ ++AQE L +L
Sbjct: 17 LQDFYTLRKDVELALERVNEVRQSAGLEQLEEDIASLEKKSADSSLWDDPSKAQEILVSL 76
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKD++ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 77 TEVKDRVKLLNDFKLQVEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 136
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 137 LSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 196
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGY+SGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEE
Sbjct: 197 ATVELEGRYAYGYISGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEE 256
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+ISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC+EERSQLANKIKAL+RLKAKLLV
Sbjct: 257 DLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCSEERSQLANKIKALNRLKAKLLV 316
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETS 347
IAEEQRASEIKQIRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETS
Sbjct: 317 IAEEQRASEIKQIRGDMVKAEWGQQIRNYVFHPYKLVKDVRTGCETS 363
>gi|302820696|ref|XP_002992014.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
gi|300140136|gb|EFJ06863.1| hypothetical protein SELMODRAFT_134701 [Selaginella moellendorffii]
Length = 382
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/370 (65%), Positives = 301/370 (81%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+FY+LRKDVE + RV ++ SA L+Q E LA+LE +A+D +FW+ R++AQ+ L L +
Sbjct: 8 EFYSLRKDVENVAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNE 67
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KD++NL F+ K+DDA IV+L EEM+S DA L EAA + + A+D+FEL +LLS
Sbjct: 68 IKDRVNLYKTFRAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLS 127
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YDKEGA I+ITAGAGGTDAQDWA+MLLRMY RW + +K+ VVE S GEEAGIKSA
Sbjct: 128 GTYDKEGARITITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSAT 187
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+E++GRYAYGY+SGEKGTHR+VRQSPFN+KGLRQTSF+G EVMPLL E ++V+IPE DL
Sbjct: 188 LEIDGRYAYGYISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDL 247
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
EI+ R+GGKGGQNVNKVETAVR+THIPTG+ +RC+EERSQL NKIKA++ LK+KLLVI
Sbjct: 248 EITTCRSGGKGGQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVIL 307
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
E+QRA+EIK+IRGD VKAEWGQQIRNYVFHPYKLVKD+RT ETSDI +MDG LEP +
Sbjct: 308 EDQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLT 367
Query: 363 SYLKYKYSMS 372
+YL K S S
Sbjct: 368 AYLMSKQSSS 377
>gi|302762182|ref|XP_002964513.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
gi|300168242|gb|EFJ34846.1| hypothetical protein SELMODRAFT_64370 [Selaginella moellendorffii]
Length = 366
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 242/366 (66%), Positives = 299/366 (81%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+FY+LRKDVE + RV ++ SA L+Q E LA+LE +A+D +FW+ R++AQ+ L L +
Sbjct: 1 EFYSLRKDVENVAARVRQLLDSADLEQQEAVLADLENQASDPAFWEERSKAQKILSELNE 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KD++NL F+ K+DDA IV+L EEM+S DA L EAA + + A+D+FEL +LLS
Sbjct: 61 IKDRVNLYKTFRAKVDDAQCIVELLEEMESPDAALKLEAAETVSWITAAMDRFELNKLLS 120
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YDKEGA I+ITAGAGGTDAQDWA+MLLRMY RW + +K+ VVE S GEEAGIKSA
Sbjct: 121 GTYDKEGARITITAGAGGTDAQDWAEMLLRMYQRWATRSGFKSTVVESSPGEEAGIKSAT 180
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+E++GRYAYGY+SGEKGTHR+VRQSPFN+KGLRQTSF+G EVMPLL E ++V+IPE DL
Sbjct: 181 LEIDGRYAYGYISGEKGTHRLVRQSPFNSKGLRQTSFAGVEVMPLLEESEIEVEIPEGDL 240
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
EI+ R+GGKGGQNVNKVETAVR+THIPTG+ +RC+EERSQL NKIKA++ LK+KLLVI
Sbjct: 241 EITTCRSGGKGGQNVNKVETAVRVTHIPTGIALRCSEERSQLQNKIKAIALLKSKLLVIL 300
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
EEQRA+EIK+IRGD VKAEWGQQIRNYVFHPYKLVKD+RT ETSDI +MDG LEP +
Sbjct: 301 EEQRAAEIKEIRGDVVKAEWGQQIRNYVFHPYKLVKDLRTNVETSDISGIMDGNLEPLLT 360
Query: 363 SYLKYK 368
+YL K
Sbjct: 361 AYLMSK 366
>gi|168025410|ref|XP_001765227.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683546|gb|EDQ69955.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 406
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/374 (63%), Positives = 301/374 (80%), Gaps = 1/374 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+FY +RK VE RV E+ AS+ + + + LA+LE++A+ + WD+ AQ TL L +
Sbjct: 31 EFYAVRKKVEELVRRVGEVLASSDIAEKKARLADLELQASQDTLWDDPDAAQRTLSDLAE 90
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VK+ ++LL F+ K+++A I++L E + D GL++EA+ I+ L+ ALD+FEL +LLS
Sbjct: 91 VKENLDLLQQFENKVEEAQLIIELMGEKEGPDGGLVQEASEIVSWLSNALDKFELAKLLS 150
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
GPYD+ GA ++I+AGAGGTDAQDWA+MLLRMY RW EKQ Y +V+EKS GEEAGIKS
Sbjct: 151 GPYDRRGARVTISAGAGGTDAQDWAEMLLRMYSRWAEKQGYTVKVMEKSPGEEAGIKSVT 210
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
EV+GR+AYGYL+ EKGTHR+VRQSPFNAKGLRQTSF+G EVMP+ EES+DV+IPE +L
Sbjct: 211 FEVDGRFAYGYLASEKGTHRLVRQSPFNAKGLRQTSFAGVEVMPIFEEESLDVEIPETEL 270
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
E++ +RAGGKGGQNVNKVETAVRI HIPTG+ VRCTEERSQLANKIK L LKAKLLVIA
Sbjct: 271 EVTTTRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTEERSQLANKIKGLRLLKAKLLVIA 330
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
EQ+AS++K+IRGD VKAEWGQQIRNYVFHPYKLVKDVRT ETSD+ VMDGEL FI
Sbjct: 331 LEQKASDLKEIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTATETSDVAGVMDGELGSFIT 390
Query: 363 SYLKYKYSMSLSAS 376
++L++K ++S S+S
Sbjct: 391 AFLRWK-TLSESSS 403
>gi|30692917|ref|NP_198466.2| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
gi|332006669|gb|AED94052.1| high chlorophyll fluorescent 109 protein [Arabidopsis thaliana]
Length = 391
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 225/279 (80%), Positives = 254/279 (91%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
MQDFY LRKDVE AS RVEEIRASA LQQLE+E+ LE KA D+SFWD+R +AQETL +L
Sbjct: 78 MQDFYTLRKDVEIASARVEEIRASANLQQLEQEITNLESKATDTSFWDDRTKAQETLSSL 137
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+KD++ LL++FKT ++DA TIVKLTEEMDSTD LLEEA IIKELNK+LD+FELTQL
Sbjct: 138 NDLKDRMRLLSEFKTMVEDAETIVKLTEEMDSTDVSLLEEAMGIIKELNKSLDKFELTQL 197
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAV+ ITAGAGGTDAQDWADMLLRMY+RWGEKQRYKT+VVE S GEEAGIKS
Sbjct: 198 LSGPYDKEGAVVYITAGAGGTDAQDWADMLLRMYMRWGEKQRYKTKVVEMSNGEEAGIKS 257
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGY+SGEKGTHRIVRQSPFN+KGLRQTSFSG EVMPLLPEE++ ++IPEE
Sbjct: 258 ATLEIEGRYAYGYISGEKGTHRIVRQSPFNSKGLRQTSFSGVEVMPLLPEEAVGIEIPEE 317
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
DL+ISF+RAGGKGGQNVNKVETAVRITHIPTGV VRCT+
Sbjct: 318 DLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTD 356
>gi|449485390|ref|XP_004157153.1| PREDICTED: peptide chain release factor 2-like, partial [Cucumis
sativus]
Length = 237
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 221/237 (93%), Positives = 232/237 (97%)
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKSA IE+EGRYAYGY+SGEKGT
Sbjct: 1 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSAGEEAGIKSATIEIEGRYAYGYISGEKGT 60
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HRIVRQSPFN+KGLRQTSFSG EVMPLLP+ESM+V++PEEDLEISFSRAGGKGGQNVNKV
Sbjct: 61 HRIVRQSPFNSKGLRQTSFSGVEVMPLLPDESMNVELPEEDLEISFSRAGGKGGQNVNKV 120
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA
Sbjct: 121 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 180
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
EWGQQIRNYVFHPYKLVKDVRTG+ETSDIVSVMDGELEPFIK+YLKYKYS++LS D
Sbjct: 181 EWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDGELEPFIKAYLKYKYSIALSTGD 237
>gi|414887032|tpg|DAA63046.1| TPA: hypothetical protein ZEAMMB73_861498, partial [Zea mays]
Length = 421
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/278 (79%), Positives = 250/278 (89%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGLQQLE+++A LE K++DSS WD+ ++AQ L +L
Sbjct: 132 LQDFYILRKDVELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSL 191
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKDK+ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 192 TEVKDKVKLLNDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 251
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 252 LSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 311
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEE
Sbjct: 312 ATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEE 371
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
DLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC+
Sbjct: 372 DLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCS 409
>gi|414887030|tpg|DAA63044.1| TPA: hypothetical protein ZEAMMB73_861498 [Zea mays]
Length = 364
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 220/278 (79%), Positives = 250/278 (89%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QDFY LRKDVE A +RV E+R SAGLQQLE+++A LE K++DSS WD+ ++AQ L +L
Sbjct: 75 LQDFYILRKDVELALERVNEVRQSAGLQQLEEDIASLENKSSDSSLWDDPSKAQGILVSL 134
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T+VKDK+ LL DFK ++++A TIVKLTEE+DS D GLLEEA+ IIK LNKALD FE+TQL
Sbjct: 135 TEVKDKVKLLNDFKLQIEEAETIVKLTEELDSIDTGLLEEASKIIKALNKALDNFEMTQL 194
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEAGIKS
Sbjct: 195 LSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEAGIKS 254
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEE
Sbjct: 255 ATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEE 314
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
DLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC+
Sbjct: 315 DLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCS 352
>gi|7388055|sp|P74476.2|RF2_SYNY3 RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 372
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/367 (57%), Positives = 275/367 (74%), Gaps = 2/367 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+ + +L++++E S R+ + + L L+ ++ +LE AA FWD+ +AQ+ LQ L
Sbjct: 2 ITELTDLKRNLELISSRLGQTQDYLDLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTL 61
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ K ++ ++ + D+ IV+L E D D LL EA + +++L K LD++EL QL
Sbjct: 62 NETKSQLEQWGIWQQQWQDSQAIVELLELED--DQALLTEAETTLEQLQKELDRWELQQL 119
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYD +GA ++I AGAGGTDAQDWA+MLLRMY RW EKQ YK + E S G+EAG+KS
Sbjct: 120 LSGPYDAKGATLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKS 179
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+E+EGRYAYGYL EKGTHR+VR SPFNA G RQTSF+G EVMPLL EE++ + IP++
Sbjct: 180 VTLEIEGRYAYGYLKSEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDK 239
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+IS SRAGGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+
Sbjct: 240 DLDISTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLI 299
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ EEQRA I +IRGD V+A WG QIRNYVFHPY+LVKD+RT ET+D+ VMDGEL F
Sbjct: 300 VLEEQRAQAIAEIRGDMVEAAWGTQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDF 359
Query: 361 IKSYLKY 367
I++YL++
Sbjct: 360 IEAYLRH 366
>gi|440684132|ref|YP_007158927.1| Peptide chain release factor 2 [Anabaena cylindrica PCC 7122]
gi|428681251|gb|AFZ60017.1| Peptide chain release factor 2 [Anabaena cylindrica PCC 7122]
Length = 373
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/364 (57%), Positives = 274/364 (75%), Gaps = 3/364 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D L++++E S R+ + + + L+ ++ +LE +A FWD++ +AQ+TLQ L D
Sbjct: 2 DVLELKREIETLSGRLGKTQDYLDVPALKAKIHDLEQISAQPEFWDDQTQAQQTLQELND 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KD + + +DD +++L E TD LL+EA S I +LN+ LDQ+EL QLLS
Sbjct: 62 LKDHLEQYYQWHANLDDTRVVIELLEL--ETDESLLQEAESTITKLNRELDQWELQQLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
GPYD +GAV++I AGAGGTDAQDWA ML+RMY RW E YK + E+S G+EAGIKSA
Sbjct: 120 GPYDIQGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEDHGYKVILSEESEGDEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+E+ GRYAYGYL E GTHR+VR SPFNA G RQTSF+G EVMP + + ++ + IPE+DL
Sbjct: 180 LEITGRYAYGYLRSEMGTHRLVRISPFNANGKRQTSFAGVEVMPQI-DNTVKLDIPEKDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
EI+ +R+GGKGGQNVNKVETAVRI H+PTG+ VRCTEERSQL NK KAL+RLKAKLLVIA
Sbjct: 239 EITTTRSGGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALARLKAKLLVIA 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+EQRA EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I +M+GE++ FI+
Sbjct: 299 KEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNTETTAIGDIMNGEIDAFIQ 358
Query: 363 SYLK 366
+YL+
Sbjct: 359 AYLR 362
>gi|428300612|ref|YP_007138918.1| peptide chain release factor 2 (bRF-2) [Calothrix sp. PCC 6303]
gi|428237156|gb|AFZ02946.1| bacterial peptide chain release factor 2 (bRF-2) [Calothrix sp. PCC
6303]
Length = 372
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/374 (58%), Positives = 278/374 (74%), Gaps = 3/374 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +++++EA S R+ + + + L ++ +LE +A FW+++ EAQ+TL+ L +
Sbjct: 2 DVLEIKREIEALSRRLGKTQDYLDIPALTAKIQDLEQISAQPEFWNDQTEAQQTLRELDE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K ++ + + ++D +V+L E TD GLLEEA S + LN+ LDQ+EL QLLS
Sbjct: 62 LKVHLSQYHGWLSSVEDTRAVVELLEL--ETDEGLLEEATSTVIRLNRELDQWELEQLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
YD GAV++I AGAGGTDAQDWA+MLLRMY RWGE YK ++E S G+EAG+KSA
Sbjct: 120 NEYDHLGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEDHNYKVHLIEISEGDEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
IEV GRYAYGYL E GTHR+VR SPFNA G RQTSF+G EVMP + + S+ + IPE+DL
Sbjct: 180 IEVTGRYAYGYLRSEMGTHRLVRISPFNANGKRQTSFAGVEVMPQI-DSSVQLDIPEKDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+I+ SRAGGKGGQNVNKVETAVR+ HIPTGV VRCTEERSQL NK KAL+RLKAKLLVIA
Sbjct: 239 DITTSRAGGKGGQNVNKVETAVRVVHIPTGVAVRCTEERSQLQNKEKALARLKAKLLVIA 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+EQRA EI +IRGD V A WG QIRNYVFHPY+LVKD+RT ET+ I VM+GEL+ FI+
Sbjct: 299 KEQRAKEIAEIRGDMVDASWGNQIRNYVFHPYQLVKDLRTNVETTAIGDVMNGELDQFIQ 358
Query: 363 SYLKYKYSMSLSAS 376
+YL+ + + SAS
Sbjct: 359 TYLRQENQLVESAS 372
>gi|427723106|ref|YP_007070383.1| peptide chain release factor 2 (bRF-2) [Leptolyngbya sp. PCC 7376]
gi|427354826|gb|AFY37549.1| bacterial peptide chain release factor 2 (bRF-2) [Leptolyngbya sp.
PCC 7376]
Length = 373
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/366 (56%), Positives = 276/366 (75%), Gaps = 2/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + +L++ + S+R+ + + + L ++ +LE AA FW+N+ AQ T+Q L
Sbjct: 1 MIELADLKRSLVMVSERLGKTQEYLDPKTLNAKIFDLEQVAAQPEFWENQDTAQTTMQEL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D+K ++ + ++ +DA I +L E D D LL+EA ++ L K LD++EL Q+
Sbjct: 61 NDLKANLDQYEQWHSQFEDAEAIAELLELED--DPALLDEAIQNLETLQKELDRWELQQM 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD GAV++I AGAGGTDAQDWA+MLLRMY RW EKQ YK ++ E S G+EAG+KS
Sbjct: 119 LSGEYDNNGAVLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKVKLAEISEGDEAGLKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYA+GYL EKGTHR+VR SPFNA G RQTSF+G E+MP+L ++++ V+IP++
Sbjct: 179 ATLEIEGRYAFGYLKSEKGTHRLVRISPFNANGKRQTSFAGIEIMPVLGDDAVKVEIPDK 238
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LKAKLLV
Sbjct: 239 DLEITTSRAGGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKAMALLKAKLLV 298
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA+EQR EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ VMDG+L+ F
Sbjct: 299 IAQEQRTQEIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNKETTDVSGVMDGDLDSF 358
Query: 361 IKSYLK 366
I++YL+
Sbjct: 359 IEAYLR 364
>gi|427721077|ref|YP_007069071.1| peptide chain release factor 2 [Calothrix sp. PCC 7507]
gi|427353513|gb|AFY36237.1| peptide chain release factor 2 [Calothrix sp. PCC 7507]
Length = 370
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 273/364 (75%), Gaps = 3/364 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +++++E S R+ + + + L ++ +LE +A FW ++ +AQ+TLQ L +
Sbjct: 2 DVLEIKREIETLSSRLGKTQDYLDVPALTAKIQDLEQISAQPEFWVDQTQAQQTLQELNN 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KD + + ++D +V+L E TD GLL+EA S I +LN+ LDQ+EL QLLS
Sbjct: 62 LKDHLAQYHQWHVSLEDTKAVVELLEL--ETDEGLLQEAESTITKLNRELDQWELQQLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD EGAV++I+AGAGGTDAQDWA ML+RMY RW E YK + E+S G+EAGIKSA
Sbjct: 120 GLYDAEGAVLTISAGAGGTDAQDWAFMLMRMYTRWAEAHGYKVTLAEESKGDEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+E+ GRYAYGYL E GTHR+VR SPFNA G RQTSF+G EVMP + + S+ + IPE+DL
Sbjct: 180 LEITGRYAYGYLRSEMGTHRLVRISPFNANGKRQTSFAGVEVMPQI-DNSVQLDIPEKDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
EI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCTEERSQL NK KAL+RLKAKLLVIA
Sbjct: 239 EITTTRSGGKGGQNVNKVETAVRVVHLPTGLAVRCTEERSQLQNKEKALARLKAKLLVIA 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+EQRA EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I VM+G+L+ FI+
Sbjct: 299 QEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNTETTGISDVMNGDLDTFIQ 358
Query: 363 SYLK 366
+YL+
Sbjct: 359 AYLR 362
>gi|428779410|ref|YP_007171196.1| peptide chain release factor 2 [Dactylococcopsis salina PCC 8305]
gi|428693689|gb|AFZ49839.1| peptide chain release factor 2 [Dactylococcopsis salina PCC 8305]
Length = 367
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/363 (56%), Positives = 273/363 (75%), Gaps = 3/363 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E S R+ + + L ++ ++ +LE +AA FWD+ AQ TLQ L D+K
Sbjct: 6 LKREMETISQRLGKAQEYLDLPLIQAQIEDLEQQAAQPEFWDDPETAQGTLQKLNDLKSA 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ + +D I++L E D L EEA ++ LN+ALD++EL QLLS PYD
Sbjct: 66 WEQYQKWRDRAEDTKAILELLE--TEADHALWEEATENLQTLNQALDRWELQQLLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ GAV++I GAGGTDAQDWA MLLRMY RWGEKQ Y + E S G+EAGIKSA +E+E
Sbjct: 124 ERGAVLTINTGAGGTDAQDWAQMLLRMYSRWGEKQGYTVNLAELSEGDEAGIKSATLEIE 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESM-DVQIPEEDLEIS 245
GRY YGYL GEKGTHR+VR SP+NA G RQTSF+G EVMP+L + ++ D+++PE+DLEI+
Sbjct: 184 GRYGYGYLKGEKGTHRLVRISPYNANGKRQTSFAGVEVMPMLDQTTIQDIELPEKDLEIT 243
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
SRAGGKGGQNVNKVETAVR+ H+PTG+ VRCT+ERSQL N+ KA++ LK+KL+VIA+EQ
Sbjct: 244 TSRAGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQNREKAIALLKSKLIVIAQEQ 303
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
RA +I +IRGDAV+A WG QIRNYVFHPY++VKD+RT ETS + V+DGE+ PF+++YL
Sbjct: 304 RAQKIAEIRGDAVEAAWGNQIRNYVFHPYQMVKDLRTNVETSAVEDVLDGEINPFVEAYL 363
Query: 366 KYK 368
+ K
Sbjct: 364 RSK 366
>gi|209527406|ref|ZP_03275912.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
gi|376006049|ref|ZP_09783392.1| Peptide chain release factor 2 (RF-2) [Arthrospira sp. PCC 8005]
gi|423067877|ref|ZP_17056667.1| peptide chain release factor 2 [Arthrospira platensis C1]
gi|209492141|gb|EDZ92490.1| peptide chain release factor 2 [Arthrospira maxima CS-328]
gi|375325573|emb|CCE19145.1| Peptide chain release factor 2 (RF-2) [Arthrospira sp. PCC 8005]
gi|406710620|gb|EKD05827.1| peptide chain release factor 2 [Arthrospira platensis C1]
Length = 339
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/330 (61%), Positives = 259/330 (78%), Gaps = 2/330 (0%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E AA +FWD++ +AQ+TLQ L+D+K + D++ ++D I +L E D D
Sbjct: 1 MEQLAAQPNFWDDQTQAQKTLQTLSDLKSVLQQQQDWRKTLEDTGAIAELLELED--DES 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L +EA S + L + +D++EL QLLSGPYD+ GAV++I AGAGGTDAQDWA+MLLRMY R
Sbjct: 59 LRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTR 118
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
WGE Q YK + E S G+EAGIKSA +E+EG YAYGYL EKGTHR+VR SPFNA G RQ
Sbjct: 119 WGEAQGYKVHLAEISEGDEAGIKSATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQ 178
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+G E+MP+L E ++++ IPE+DLEI+ SRAGGKGGQNVNKVETAVRI HIPTG+ VR
Sbjct: 179 TSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVR 238
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
CT+ERSQL N+ KA++ LKAKLLV+A+EQRA I +IRGD V+A WG QIRNYVFHPY++
Sbjct: 239 CTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQM 298
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VKD+RTG ET+ I VM+GEL+ FI++YL+
Sbjct: 299 VKDLRTGEETTAINDVMNGELDGFIQAYLR 328
>gi|443316594|ref|ZP_21046032.1| peptide chain release factor 2 [Leptolyngbya sp. PCC 6406]
gi|442783787|gb|ELR93689.1| peptide chain release factor 2 [Leptolyngbya sp. PCC 6406]
Length = 364
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 199/343 (58%), Positives = 269/343 (78%), Gaps = 3/343 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E ++ +LE +AA WD+ +AQ +Q+L D K +++ + + +++DA +++L +E
Sbjct: 20 IEAQIHDLEQQAAQPELWDDPTQAQGIMQSLNDYKAQLSQIQQWWGQLEDAEAVLELLDE 79
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D LL EA + + +L++ALDQ+EL QLLSGPYDK GAV+SI AGAGGTDAQDWA+M
Sbjct: 80 --DADEALLAEAQTSLSDLDRALDQWELQQLLSGPYDKNGAVLSINAGAGGTDAQDWAEM 137
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RWGE+Q Y+ +VE S GEEAG+KS +E++GRYA+GYL EKGTHR+VR SPF
Sbjct: 138 LLRMYTRWGERQGYQVYLVELSEGEEAGLKSVTLEIQGRYAFGYLKAEKGTHRLVRISPF 197
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
N+ G RQTSF+G EVMP+L + ++ + IP++DLEI SR+GG GGQNVNKVETAVRITH+
Sbjct: 198 NSNGKRQTSFAGVEVMPIL-DRTVTLDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHL 256
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG++VRCT+ERSQL N+ KA++ L A+L+VIA+EQ+A I +IRGD V+A WG QIRNY
Sbjct: 257 PTGISVRCTQERSQLQNREKAMALLTARLMVIAQEQKAQAIAEIRGDMVEAAWGNQIRNY 316
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
VFHPY++VKD+RT ET+ I +VMDGELEPFI++YL+ M+
Sbjct: 317 VFHPYQMVKDLRTNEETTAIDTVMDGELEPFIQAYLRQGTQMA 359
>gi|218439666|ref|YP_002377995.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
gi|218172394|gb|ACK71127.1| peptide chain release factor 2 [Cyanothece sp. PCC 7424]
Length = 360
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/340 (62%), Positives = 271/340 (79%), Gaps = 2/340 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ ++ +LE +AA FWD+ AQ TLQ L ++K + L ++T+++DA I +L
Sbjct: 17 LPALKAKIKDLEQRAAQPEFWDSPETAQSTLQELNELKSSLELYQQWQTQLEDAKAISEL 76
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E + D LL+EA + +++LN L+++EL QLLSGPYD +G +++I AGAGGTDAQDW
Sbjct: 77 LELEE--DTSLLQEAQTNLQQLNHELERWELQQLLSGPYDAKGVLLTINAGAGGTDAQDW 134
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMY RWGEK+ YK +VE S G+EAGIKSA +E+EGRYAYGYL GEKGTHR+VR
Sbjct: 135 AAMLLRMYTRWGEKRGYKVHLVESSEGDEAGIKSATLEIEGRYAYGYLKGEKGTHRLVRI 194
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPFNA G RQTSF+G E+MP + EE+++V+IPE+DLEI+ SRAGGKGGQNVNKVETAVR+
Sbjct: 195 SPFNANGKRQTSFAGVEIMPNIEEEALNVEIPEKDLEITTSRAGGKGGQNVNKVETAVRV 254
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
H+PTG+ VRCTEERSQL NK KAL+ LKAKLLVIA EQRA EI +IRGD V+A WG QI
Sbjct: 255 VHLPTGIAVRCTEERSQLQNKEKALALLKAKLLVIAVEQRAQEIAEIRGDMVEAAWGNQI 314
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
RNYVFHPY++VKD+RT ETSDI +VMDG+L+ FI++YL+
Sbjct: 315 RNYVFHPYQMVKDLRTNVETSDIGAVMDGDLDAFIEAYLR 354
>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
Length = 359
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/340 (60%), Positives = 263/340 (77%), Gaps = 2/340 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ L+ ++ +LE +AA FW+++ AQ+ LQ LT++K + ++ + +DA I +L
Sbjct: 15 LKTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAAAIAEL 74
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E + D LL EA + +L K L+++EL Q+LSG YD GAV++I AGAGGTDAQDW
Sbjct: 75 LTE--AEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDAQDW 132
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY RW EKQ YK R+ E S G+EAG+KSA +EV GRYA+GYL EKGTHR+VR
Sbjct: 133 AEMLLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRLVRI 192
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPFNA G RQTSF+G EVMP+L + ++ V IPE+DLEI+ SRAGGKGGQNVNKVETAVRI
Sbjct: 193 SPFNANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETAVRI 252
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
H+PTGV VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V+A WG QI
Sbjct: 253 VHLPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWGNQI 312
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
RNYVFHPY++VKD+RT HET+D+ VMDG+L+ FI++ L+
Sbjct: 313 RNYVFHPYQMVKDLRTNHETTDVDGVMDGDLDAFIEASLR 352
>gi|334118073|ref|ZP_08492163.1| peptide chain release factor 2 [Microcoleus vaginatus FGP-2]
gi|333460058|gb|EGK88668.1| peptide chain release factor 2 [Microcoleus vaginatus FGP-2]
Length = 377
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/361 (59%), Positives = 280/361 (77%), Gaps = 3/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+++ ++E SDR+ + + L ++ +LE A +FWD++ AQETLQ L D+K
Sbjct: 5 DIKHNIETLSDRLGTTQDYLDIPALTAKIQDLEQICAQPAFWDDQDRAQETLQELNDLKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ ++++T ++DA I++L E D L +EA+S + +L + LDQ+EL QLLSGPY
Sbjct: 65 HLEQYSNWQTSLEDAKAILELLEL--EADESLFQEASSSLSQLTRELDQWELQQLLSGPY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ GAV++I AGAGGTDAQDWA+MLLRMY RWGE Q YK ++E S GEEAG+KSA +E+
Sbjct: 123 DEGGAVLTINAGAGGTDAQDWAEMLLRMYTRWGESQGYKVHLMEISEGEEAGVKSASLEI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
GRYAYGY+ EKGTHR+VR SPFNA RQTSF+G EVMP+L + S+ + IPE+DLE++
Sbjct: 183 VGRYAYGYMRSEKGTHRLVRISPFNANDKRQTSFAGVEVMPIL-DRSVQLDIPEKDLEVT 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
SRAGGKGGQNVNKVETAVRI H+PTG+ VRCTEERSQL NK KAL+ LKA+LLVIA+EQ
Sbjct: 242 TSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALALLKARLLVIAKEQ 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
RASEI +IRGD V+A WGQQIRNYVFHPY++VKD+RTG ET+ I VM+GEL+PFI++YL
Sbjct: 302 RASEIAEIRGDMVEAAWGQQIRNYVFHPYQMVKDLRTGVETTAIADVMNGELDPFIQAYL 361
Query: 366 K 366
+
Sbjct: 362 R 362
>gi|383322914|ref|YP_005383767.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383326083|ref|YP_005386936.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491967|ref|YP_005409643.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384437235|ref|YP_005651959.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|339274267|dbj|BAK50754.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|359272233|dbj|BAL29752.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359275403|dbj|BAL32921.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359278573|dbj|BAL36090.1| peptide chain release factor [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407961451|dbj|BAM54691.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
Length = 335
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/331 (61%), Positives = 255/331 (77%), Gaps = 2/331 (0%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E AA FWD+ +AQ+ LQ L + K ++ ++ + D+ IV+L E D D
Sbjct: 1 MEQCAAQPDFWDDTDQAQQILQTLNETKSQLEQWGIWQQQWQDSQAIVELLELED--DQA 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
LL EA + +++L K LD++EL QLLSGPYD +GA ++I AGAGGTDAQDWA+MLLRMY R
Sbjct: 59 LLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQDWAEMLLRMYTR 118
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
W EKQ YK + E S G+EAG+KS +E+EGRYAYGYL EKGTHR+VR SPFNA G RQ
Sbjct: 119 WSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVRISPFNANGKRQ 178
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+G EVMPLL EE++ + IP++DL+IS SRAGGKGGQNVNKVETAVRI H+PTG+ VR
Sbjct: 179 TSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVHLPTGLAVR 238
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
CT+ERSQL NK KAL+ LKAKLL++ EEQRA I +IRGD V+A WG QIRNYVFHPY+L
Sbjct: 239 CTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQIRNYVFHPYQL 298
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
VKD+RT ET+D+ VMDGEL FI++YL++
Sbjct: 299 VKDLRTNVETTDVGGVMDGELSDFIEAYLRH 329
>gi|428770307|ref|YP_007162097.1| peptide chain release factor 2 (bRF-2) [Cyanobacterium aponinum PCC
10605]
gi|428684586|gb|AFZ54053.1| bacterial peptide chain release factor 2 (bRF-2) [Cyanobacterium
aponinum PCC 10605]
Length = 368
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 209/361 (57%), Positives = 266/361 (73%), Gaps = 4/361 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+KD+ S+R+ + + L L ++ +LE AA FW+ +AQETLQ L D K
Sbjct: 6 LKKDISIISERLGKTQDYLDLPNLNAQIRDLEQVAAQPEFWEAGEKAQETLQQLNDFKSL 65
Query: 67 INLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ +++ ++D IV+L E E+DS L EA +K L + LD++EL QLLSG Y
Sbjct: 66 WDTFHQWQSSLEDTKAIVELLEMELDSE---LFNEAQCNLKSLAQDLDKWELQQLLSGTY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D++GA+++I AGAGGTDAQDWA MLLRMY RW E Q Y+ + E S G+EAGIKSA +E+
Sbjct: 123 DQKGAILTINAGAGGTDAQDWAQMLLRMYTRWAENQNYRVTLTELSEGDEAGIKSATLEI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G+YA+GYL GEKGTHR+VR SP+NA G RQTSF+G +VMP L EE++ + IPE+DLE++
Sbjct: 183 DGKYAFGYLKGEKGTHRLVRISPYNANGKRQTSFAGVDVMPSLGEEAIKIDIPEKDLEVT 242
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
SRAGGKGGQNVNKVETAVRI HIPTG+ VRCT+ERSQL NK KAL+ LK KLLVI EEQ
Sbjct: 243 TSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNKEKALAILKGKLLVILEEQ 302
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
RA I IRGD V+A WG QIRNYVFHPY+LVKDVRT ET+ + V+DG LE FI++YL
Sbjct: 303 RAKAIADIRGDIVEAAWGNQIRNYVFHPYQLVKDVRTNVETAAVDDVLDGNLEAFIEAYL 362
Query: 366 K 366
+
Sbjct: 363 R 363
>gi|220910508|ref|YP_002485819.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
gi|219867119|gb|ACL47458.1| peptide chain release factor 2 [Cyanothece sp. PCC 7425]
Length = 361
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/337 (61%), Positives = 263/337 (78%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+ ++++LE AA +FWD++A AQ TLQ L ++K + L ++ + DAV ++L E
Sbjct: 20 LQAKISDLEQVAAQPNFWDDQATAQVTLQELNELKSHLEQLHRWQATLSDAVAALELVEL 79
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D LL+EA+ +K+L++ L Q+EL QLLSG YD+ GAV++I AGAGGTDAQDWA+M
Sbjct: 80 --EPDESLLQEASDNLKQLDQQLSQWELEQLLSGTYDRNGAVLTINAGAGGTDAQDWAEM 137
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW E+ YK + E S G+EAGIKSA +E++GRYAYGYL EKGTHR+VR SPF
Sbjct: 138 LLRMYTRWAEQHGYKVHLAELSEGDEAGIKSATLEIDGRYAYGYLRSEKGTHRLVRISPF 197
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
NA G RQTSF+G EVMP L + S+ ++IP++DLEI+ SR+GGKGGQNVNKVETAVRI H+
Sbjct: 198 NANGKRQTSFAGVEVMPQL-DHSVQLEIPDKDLEITTSRSGGKGGQNVNKVETAVRIVHL 256
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQ+A EI IRGDAV+A WG QIRNY
Sbjct: 257 PTGLAVRCTQERSQLQNKEKALAILKAKLLIIAQEQKAQEIADIRGDAVEAAWGTQIRNY 316
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VF PYKLVKDVRTG ET I VM+GEL+ FI++YL+
Sbjct: 317 VFDPYKLVKDVRTGVETQAIEVVMNGELDEFIQAYLR 353
>gi|428777383|ref|YP_007169170.1| peptide chain release factor 2 (bRF-2) [Halothece sp. PCC 7418]
gi|428691662|gb|AFZ44956.1| bacterial peptide chain release factor 2 (bRF-2) [Halothece sp. PCC
7418]
Length = 368
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/365 (55%), Positives = 275/365 (75%), Gaps = 3/365 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ +L++DVE +R+ + + L ++ ++ +LE +AA FWD+ AQ+TLQ L D
Sbjct: 2 EITDLKRDVETVMERLGKAQEYLDLPWIQAKIEDLEQEAAQPEFWDDPDSAQQTLQKLND 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K + ++ + +D I++L E D L EEA ++ L ++L+++EL QLL
Sbjct: 62 LKSALEQYHQWRDRAEDTQAIIELLE--TEADPALWEEATQNLEALQQSLERWELQQLLC 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD+ GAV+++ GAGGTDAQDWA MLLRMY RW EK+ YK + E S G+EAGIKSA
Sbjct: 120 EPYDERGAVLTLNTGAGGTDAQDWAQMLLRMYSRWAEKRGYKAHLAELSEGDEAGIKSAS 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESM-DVQIPEED 241
+E+EGRYAYGYL GEKGTHR+VR SPFNA G RQTSF+G EVMP+L + ++ D+++PE+D
Sbjct: 180 LEIEGRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPMLDQTTIQDIELPEKD 239
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
LEI+ SRAGGKGGQNVNKVETAVRI HIPTG+ VRCT+ERSQL N+ KA++ LK+KL+VI
Sbjct: 240 LEITTSRAGGKGGQNVNKVETAVRILHIPTGIAVRCTQERSQLQNREKAIALLKSKLIVI 299
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
A+EQRA +I +IRG+AV+A WG QIRNYVFHPY++VKD+RT ETS + V+DGE++ FI
Sbjct: 300 AQEQRAQKIAEIRGEAVEAAWGNQIRNYVFHPYQMVKDLRTNVETSAVEDVLDGEIDAFI 359
Query: 362 KSYLK 366
++YL+
Sbjct: 360 EAYLR 364
>gi|307155327|ref|YP_003890711.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
gi|306985555|gb|ADN17436.1| hypothetical protein Cyan7822_5564 [Cyanothece sp. PCC 7822]
Length = 370
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/360 (60%), Positives = 277/360 (76%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E R+ + + L L ++ +LE AA FWD+ AQ TLQ L ++K
Sbjct: 6 LKREIELIGSRLGKTQDYLDLPTLGAKIKDLEQVAAQPEFWDSPDMAQTTLQELNELKSA 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L ++T+++DA IV+L E + D LLEEA + +++LN L+++EL QLLSG YD
Sbjct: 66 LELYQQWQTQLEDAKAIVELLELEE--DTSLLEEAQTNLEQLNHELERWELQQLLSGLYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+GAV++I AGAGGTDAQDWA+MLLRMY RWGEKQ YK + E S G+EAG+KSA +E+E
Sbjct: 124 AKGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVHLAEISEGDEAGLKSATLEIE 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GRYAYGYL GEKGTHR+VR SPFNA G RQTSF+G EVMP L E+++V+IPE+DLEI+
Sbjct: 184 GRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPNLGVEAVNVEIPEKDLEITT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
SR+GGKGGQNVNKVETAVR+ HIPTG+ VRCT+ERSQL NK KAL+ LKAKLLVI EQR
Sbjct: 244 SRSGGKGGQNVNKVETAVRVVHIPTGLAVRCTQERSQLQNKEKALALLKAKLLVILTEQR 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A EI QIRGD V+A WG QIRNYVFHPY++VKD+RT ETSD+ +VMDG+L FI++YL+
Sbjct: 304 AKEIAQIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETSDVGAVMDGDLNGFIEAYLR 363
>gi|354565707|ref|ZP_08984881.1| Peptide chain release factor 2 [Fischerella sp. JSC-11]
gi|353548580|gb|EHC18025.1| Peptide chain release factor 2 [Fischerella sp. JSC-11]
Length = 372
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/360 (57%), Positives = 270/360 (75%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E DR+ + + + L ++ +LE AA FW+++ +AQ TLQ L D+K
Sbjct: 6 LKREIETLCDRLGKTQDYLDIPALTAKIQDLEQIAAQPEFWEDQVKAQGTLQELNDLKAH 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++ ++D +++L E L+EA + + +LN+ LDQ+EL QLLSGPYD
Sbjct: 66 LQQYEQWQSSLEDTKAVLELLELETDEAL--LQEAEATVTKLNRELDQWELQQLLSGPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+GAV++I AGAGGTDAQDWA+MLLRMY RW E YK + ++S G+EAGIKSA IE+
Sbjct: 124 DKGAVLTINAGAGGTDAQDWAEMLLRMYTRWAENHGYKVNLTDESEGDEAGIKSATIEIT 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GRYAYGYL E GTHR+VR SPFNA G RQTSF+G EVMP L + S+ ++IPE+DLEI+
Sbjct: 184 GRYAYGYLRSETGTHRLVRISPFNANGKRQTSFAGVEVMPQL-DNSVQLEIPEKDLEITT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
SR+GGKGGQNVNKVETAVRI HIPTG+ VRCTEERSQL NK KAL+RLKAKLLVIA+EQ
Sbjct: 243 SRSGGKGGQNVNKVETAVRIVHIPTGIAVRCTEERSQLQNKEKALARLKAKLLVIAQEQH 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I VM+GEL+ FI++YL+
Sbjct: 303 AKEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNVETTAIADVMNGELDMFIQAYLR 362
>gi|354552620|ref|ZP_08971928.1| Peptide chain release factor 2 [Cyanothece sp. ATCC 51472]
gi|353555942|gb|EHC25330.1| Peptide chain release factor 2 [Cyanothece sp. ATCC 51472]
Length = 370
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/367 (58%), Positives = 271/367 (73%), Gaps = 2/367 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++++E R+ + + L L+ + LE AA FWD+ AQ TLQ L D+K +
Sbjct: 6 LKREIELIGSRLGKTQDYLDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQ 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E D D L +EA I +LN LD++EL QLLSG YD
Sbjct: 66 LEQYQRWCHQLEDTKAIAELLELED--DTTLRQEAQENITQLNHNLDRWELQQLLSGIYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+GA+++I AGAGGTDAQDWA MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+E
Sbjct: 124 TKGAILTINAGAGGTDAQDWAQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIE 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GRYA+GYL GEKGTHR+VR SPFNA G RQTSF+G EVMP L E+ + V+IP++DLEIS
Sbjct: 184 GRYAFGYLKGEKGTHRLVRISPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEIST 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
SR+GGKGGQNVNKVETAVR+ HIPTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQR
Sbjct: 244 SRSGGKGGQNVNKVETAVRVVHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQR 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A EI +IRGD V A WG QIRNYVFHPY++VKD+RT ET+DI VMDG L+PFI++YL+
Sbjct: 304 AQEIAEIRGDMVDAAWGNQIRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYLR 363
Query: 367 YKYSMSL 373
Y S L
Sbjct: 364 YDTSSDL 370
>gi|413938323|gb|AFW72874.1| hypothetical protein ZEAMMB73_942412 [Zea mays]
Length = 227
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 197/227 (86%), Positives = 212/227 (93%)
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
MLLRMYVRWGEKQRYKTRVVEKS GE+AGIKSA +E+EGRYAYGYLSGEKGTHRIVRQSP
Sbjct: 1 MLLRMYVRWGEKQRYKTRVVEKSPGEQAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSP 60
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
FNAKGLRQTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAVR+ H
Sbjct: 61 FNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAVRMVH 120
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
IPTG+ VRC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQQIRN
Sbjct: 121 IPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQQIRN 180
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
YVFHPYKLVKDVRTG ETSDI VMDGEL+PFI++YLKYK + + ++
Sbjct: 181 YVFHPYKLVKDVRTGCETSDITGVMDGELDPFIRAYLKYKLTAAATS 227
>gi|307111728|gb|EFN59962.1| hypothetical protein CHLNCDRAFT_133064 [Chlorella variabilis]
Length = 426
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/368 (56%), Positives = 266/368 (72%), Gaps = 1/368 (0%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q L++ + +R+++ A L L++ +AELE A S W+ RA A LQ LT
Sbjct: 40 QSLGILKRRQQELQERIQDAVKVADLPSLKRRMAELEEAAGASDLWEQRARATAVLQQLT 99
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA-SIIKELNKALDQFELTQL 120
+++++ L F +++D ++L E D A + A SI L L+ +EL +L
Sbjct: 100 ALREEVAALERFCGQLEDLGVAMELLEMEDEAGAQAMAAEAGSICDGLAAGLEAWELRRL 159
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L GPYD GAV++I AGAGGTDAQDWA+ML RMY+RW EKQ ++TRVV++ GEEAGIKS
Sbjct: 160 LGGPYDDRGAVLTIQAGAGGTDAQDWAEMLERMYLRWAEKQGHRTRVVDRQQGEEAGIKS 219
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
IEV+GRYAYGYL GEKGTHR+VRQSPFNAK RQTSF+ EVMP+L E +V++PE
Sbjct: 220 VEIEVDGRYAYGYLHGEKGTHRLVRQSPFNAKAARQTSFAAVEVMPMLGELVDEVELPES 279
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEI+ R+ G GGQNVNKVETAVRI H+PTG+ V+C ERSQ NK AL LKAKLLV
Sbjct: 280 DLEITTMRSAGAGGQNVNKVETAVRIKHLPTGIAVKCQMERSQAQNKSIALGMLKAKLLV 339
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+A+EQ+ E+ +IRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETSD+ VMDGEL+PF
Sbjct: 340 VAQEQQLQEVAEIRGDLVKAEWGQQIRNYVFHPYKLVKDVRTGQETSDVAGVMDGELQPF 399
Query: 361 IKSYLKYK 368
+++YL+++
Sbjct: 400 MQAYLQHR 407
>gi|172039100|ref|YP_001805601.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
gi|171700554|gb|ACB53535.1| peptide chain release factor 2 [Cyanothece sp. ATCC 51142]
Length = 358
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 214/352 (60%), Positives = 263/352 (74%), Gaps = 2/352 (0%)
Query: 22 RASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAV 81
R + L L+ + LE AA FWD+ AQ TLQ L D+K ++ + +++D
Sbjct: 9 RTTFDLPALKAAIKNLENTAAQPQFWDDPETAQTTLQELNDLKSQLEQYQRWCHQLEDTK 68
Query: 82 TIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGT 141
I +L E D D L +EA I +LN LD++EL QLLSG YD +GA+++I AGAGGT
Sbjct: 69 AIAELLELED--DTTLRQEAQENITQLNHNLDRWELQQLLSGIYDTKGAILTINAGAGGT 126
Query: 142 DAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTH 201
DAQDWA MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+EGRYA+GYL GEKGTH
Sbjct: 127 DAQDWAQMLLRMYTRWGEQQGYKVDLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTH 186
Query: 202 RIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVE 261
R+VR SPFNA G RQTSF+G EVMP L E+ + V+IP++DLEIS SR+GGKGGQNVNKVE
Sbjct: 187 RLVRISPFNANGKRQTSFAGVEVMPALEEDDLKVEIPDKDLEISTSRSGGKGGQNVNKVE 246
Query: 262 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 321
TAVR+ HIPTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V A
Sbjct: 247 TAVRVVHIPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVDAA 306
Query: 322 WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
WG QIRNYVFHPY++VKD+RT ET+DI VMDG L+PFI++YL+Y S L
Sbjct: 307 WGNQIRNYVFHPYQMVKDLRTNIETTDITGVMDGYLDPFIEAYLRYDTSSDL 358
>gi|443311195|ref|ZP_21040827.1| peptide chain release factor 2 [Synechocystis sp. PCC 7509]
gi|442778725|gb|ELR88986.1| peptide chain release factor 2 [Synechocystis sp. PCC 7509]
Length = 361
Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/346 (58%), Positives = 262/346 (75%), Gaps = 3/346 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + L ++ +LE A+ FW+N+ AQ+TLQ L +KD + ++ ++D
Sbjct: 11 LRTIFDIPALNAKIQDLEQVASQPEFWENQEAAQKTLQELGSLKDHYSQYHQWQASLEDT 70
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L E D GLL EA + ++ L+K LD +EL QLLSG YD++GAV++I AGAGG
Sbjct: 71 KAVVELLEL--ENDEGLLTEAQTNVRHLHKELDGWELQQLLSGTYDEKGAVLTINAGAGG 128
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDWA+MLLRMY RW E+Q YK + E S G+EAG+KSA IE+ GRYAYGYL EKGT
Sbjct: 129 TDAQDWAEMLLRMYTRWAEEQGYKVTLEEISQGDEAGLKSATIEIAGRYAYGYLRSEKGT 188
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPFNA RQTSF+G E+MPL+ + S+ + IPE+DLEI+ +RAGGKGGQNVNKV
Sbjct: 189 HRLVRISPFNANDKRQTSFAGVEIMPLI-DNSVHLDIPEKDLEITTTRAGGKGGQNVNKV 247
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRI HIPTGV VRCT+ERSQL NK KAL+ LKAKLL+IAEEQRA EI +IRGD V+A
Sbjct: 248 ETAVRIVHIPTGVAVRCTQERSQLQNKEKALAILKAKLLIIAEEQRAQEIAEIRGDIVEA 307
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
WG QIRNYVFHPY++VKD+RT ET+ + VM+GE++ FI++YL+
Sbjct: 308 AWGNQIRNYVFHPYQMVKDLRTNVETTAVTDVMNGEIDLFIQAYLR 353
>gi|257060501|ref|YP_003138389.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
gi|256590667|gb|ACV01554.1| hypothetical protein Cyan8802_2694 [Cyanothece sp. PCC 8802]
Length = 375
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 273/360 (75%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+++++ + R+ + + L L + +LE AA FWDN+ AQ+TLQ L D+K
Sbjct: 16 LKREIQQIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSS 75
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E + DA L EEA + + +LN LD++EL +LLSG YD
Sbjct: 76 VEEYHQWMGQLEDLKAIAELLELEE--DATLNEEAEANLTQLNHELDRWELQRLLSGIYD 133
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+GAV++I AGAGGTDAQDWA+MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+E
Sbjct: 134 SKGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIE 193
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GRYAYGYL GEKGTHR+VR SPFNA G RQTSF+G EVMP L EE + V+IPE+DLEI+
Sbjct: 194 GRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITT 253
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
+R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQR
Sbjct: 254 TRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQR 313
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A I +IRGD V+A WG QIRNYVFHPY++VKDVRT ET+D+ VMDG+L+ FI+SYL+
Sbjct: 314 AQAIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 373
>gi|218248175|ref|YP_002373546.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
gi|226739124|sp|B7K0A6.1|RF2_CYAP8 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|218168653|gb|ACK67390.1| hypothetical protein PCC8801_3422 [Cyanothece sp. PCC 8801]
Length = 365
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 273/360 (75%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+++++ + R+ + + L L + +LE AA FWDN+ AQ+TLQ L D+K
Sbjct: 6 LKREIQQIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSS 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E + DA L EEA + + +LN LD++EL +LLSG YD
Sbjct: 66 VEEYHQWMGQLEDLKAIAELLELEE--DATLNEEAEANLTQLNHELDRWELQRLLSGIYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+GAV++I AGAGGTDAQDWA+MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+E
Sbjct: 124 SKGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIE 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GRYAYGYL GEKGTHR+VR SPFNA G RQTSF+G EVMP L EE + V+IPE+DLEI+
Sbjct: 184 GRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
+R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQR
Sbjct: 244 TRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQR 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A I +IRGD V+A WG QIRNYVFHPY++VKDVRT ET+D+ VMDG+L+ FI+SYL+
Sbjct: 304 AQAIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 363
>gi|113953765|ref|YP_731847.1| peptide chain release factor 2 [Synechococcus sp. CC9311]
gi|113881116|gb|ABI46074.1| peptide chain release factor 2, programmed frameshift
[Synechococcus sp. CC9311]
Length = 375
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/366 (56%), Positives = 266/366 (72%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D + ++D+ +DR+ + + L + +LE AA FW+++ AQ+ ++ L
Sbjct: 1 MLDLTDFKRDLSELTDRLGHAQDCLDVPALNAKQQDLEQLAAQPDFWNDQQNAQKQMRRL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+VK ++ L D++ +DD ++L E D LL EA + +L +ALD++EL +L
Sbjct: 61 DEVKAQLQQLVDWRGAIDDGQATLELHEL--EPDEDLLGEAQQGLNQLRQALDRWELERL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY RW E Q V E S GEEAGIKS
Sbjct: 119 LSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDQGMSVSVNELSEGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
IE+EGRYAYGYL EKGTHR+VR SPFNA RQTSF+G EVMP L EE +++ IPE+
Sbjct: 179 TTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGVEVMPKLDEE-VELDIPEK 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LKAKLLV
Sbjct: 238 DLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLV 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA+EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ VMDG+L PF
Sbjct: 298 IAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTQEETTDVQGVMDGDLNPF 357
Query: 361 IKSYLK 366
I++ L+
Sbjct: 358 IQALLR 363
>gi|148243347|ref|YP_001228504.1| peptide chain release factor 2, partial [Synechococcus sp. RCC307]
gi|147851657|emb|CAK29151.1| Protein chain release factor B [Synechococcus sp. RCC307]
Length = 349
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 206/331 (62%), Positives = 258/331 (77%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ A++ ++ L DVK ++ L ++ +DDA ++L + ++ DA
Sbjct: 11 DLEQLAAQPDFWDDQNNARKQMRQLDDVKAQLEQLRTWRASVDDAAATLELYD-LEPDDA 69
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LLEEA ++EL ALD++EL +LLSG YD+EGAVISI AGAGGTDAQDWA ML+RMY
Sbjct: 70 -LLEEANGGLQELRLALDRWELERLLSGTYDQEGAVISINAGAGGTDAQDWALMLMRMYT 128
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E + K V E S GEEAGIKS IEVEGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 129 RWAEDRGMKVTVDELSEGEEAGIKSCTIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKR 188
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE +D++IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 189 QTSFAGVEVMPKL-EEEVDLEIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 247
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LK+KLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 248 RCTQERSQLQNKEKAMALLKSKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 307
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG+L+PFI+S L+
Sbjct: 308 MVKDLRTNEETTDVQGVMDGDLDPFIQSLLR 338
>gi|33866841|ref|NP_898400.1| peptide chain release factor 2 [Synechococcus sp. WH 8102]
gi|81573750|sp|Q7U3W6.1|RF2_SYNPX RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|33639442|emb|CAE08826.1| peptide chain release factor RF-2 [Synechococcus sp. WH 8102]
Length = 374
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 264/364 (72%), Gaps = 3/364 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D + ++D+ +DR+ + + L+ +LE AA FWD++ AQ+ ++ L +
Sbjct: 2 DLTDFKRDLSELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VK ++ L D+ +DDA ++L E D +L EA + +L + LD++EL +LLS
Sbjct: 62 VKAQLQQLADWGGAVDDAKATLELYEL--EPDEEMLTEAQEGLNQLRQGLDRWELERLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YDKEGAV++I AGAGGTDAQDWA MLLRMY RW E K V E S GEEAGIKS
Sbjct: 120 GDYDKEGAVLTINAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
IEVEGRYAYGYL EKGTHR+VR SPFNA RQTSF+G EVMP + EE +D+ IPE+DL
Sbjct: 180 IEVEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGIEVMPKIDEE-VDIDIPEKDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
E++ SR+GG GGQNVNKVETAVRI HIPTG+ VRCT+ERSQL NK KA++ LKAKLLVIA
Sbjct: 239 EVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIA 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +VMDG L+PFI
Sbjct: 299 QEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFID 358
Query: 363 SYLK 366
+ L+
Sbjct: 359 ASLR 362
>gi|428773350|ref|YP_007165138.1| peptide chain release factor 2 (bRF-2) [Cyanobacterium stanieri PCC
7202]
gi|428687629|gb|AFZ47489.1| bacterial peptide chain release factor 2 (bRF-2) [Cyanobacterium
stanieri PCC 7202]
Length = 368
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 270/364 (74%), Gaps = 1/364 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ +L++++ ++R+ + + L+ + +LE A+ FWD +AQ+ LQ L +
Sbjct: 2 ELADLKREISVITERLSTTQDYLDIPSLKANIHDLEQVASQPQFWDEADKAQKILQDLNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K + +T ++ ++D IV+L E + E ++ + L + LD++EL +LLS
Sbjct: 62 LKSSLAQITRWQKSLEDTKAIVELLELEEEDLELFTEAEHNLTR-LAQELDRWELRKLLS 120
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
GPYD+ GAV++I AGAGGTDAQDWA MLLRMY RW EKQ YK + + S G+EAGIKS
Sbjct: 121 GPYDQRGAVLTINAGAGGTDAQDWAQMLLRMYTRWAEKQDYKVTLTDMSEGDEAGIKSVS 180
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+E+EGRYA+GYL GEKGTHR+VR SPFNA G RQTSF+G +VMPLL E++DV IP++DL
Sbjct: 181 LEIEGRYAFGYLRGEKGTHRLVRISPFNANGKRQTSFAGVDVMPLLENEALDVDIPDKDL 240
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
E++ SRAGGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KAL+ LKAKLLVIA
Sbjct: 241 EVTTSRAGGKGGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALAILKAKLLVIA 300
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+EQ+ EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I +VMDG+L+ FI+
Sbjct: 301 QEQKIQEIAEIRGDIVEAAWGMQIRNYVFHPYQMVKDLRTNVETNAIDNVMDGDLDAFIE 360
Query: 363 SYLK 366
+YLK
Sbjct: 361 AYLK 364
>gi|158336840|ref|YP_001518014.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
gi|158307081|gb|ABW28698.1| peptide chain release factor 2 [Acaryochloris marina MBIC11017]
Length = 304
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/297 (66%), Positives = 242/297 (81%), Gaps = 3/297 (1%)
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
L D++ +DDA +V+L + + DAGLL+EAA +++LN+ LDQ+EL QLLSGPYDK G
Sbjct: 4 LQDWQGTLDDAEALVELLQLEE--DAGLLQEAAGNLRQLNQQLDQWELQQLLSGPYDKVG 61
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I GAGGTDAQDWA+MLLRMY RW E+Q YK + E S G+EAGIKSA +EVEGRY
Sbjct: 62 AVLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGRY 121
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL EKGTHR+VR SPFNA G RQTSF+G EVMP L E +++ IP+ DLEI+ SR+
Sbjct: 122 AYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHE-VELDIPDTDLEITTSRS 180
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
GGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LKAKLLVIA+EQ+A E
Sbjct: 181 GGKGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKE 240
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
I IRGDAV+A WG QIRNYVFHPY++VKD+RT ET+ I SVMDG L+ FI++YL+
Sbjct: 241 IADIRGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYLR 297
>gi|359460154|ref|ZP_09248717.1| peptide chain release factor 2 [Acaryochloris sp. CCMEE 5410]
Length = 304
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/297 (66%), Positives = 242/297 (81%), Gaps = 3/297 (1%)
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
L D++ +DDA +V+L + + DAGLL+EAA +++LN+ LDQ+EL QLLSGPYDK G
Sbjct: 4 LQDWQGTLDDAEALVELLQLEE--DAGLLQEAAGNLEQLNQQLDQWELQQLLSGPYDKVG 61
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I GAGGTDAQDWA+MLLRMY RW E+Q YK + E S G+EAGIKSA +EVEGRY
Sbjct: 62 AVLTINTGAGGTDAQDWAEMLLRMYTRWSERQGYKVHLAELSEGDEAGIKSATLEVEGRY 121
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL EKGTHR+VR SPFNA G RQTSF+G EVMP L E +++ IP+ DLEI+ SR+
Sbjct: 122 AYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPQLDHE-VELDIPDTDLEITTSRS 180
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
GGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LKAKLLVIA+EQ+A E
Sbjct: 181 GGKGGQNVNKVETAVRIVHVPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIAQEQKAKE 240
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
I IRGDAV+A WG QIRNYVFHPY++VKD+RT ET+ I SVMDG L+ FI++YL+
Sbjct: 241 IADIRGDAVEAAWGNQIRNYVFHPYQMVKDLRTNQETTAIESVMDGALDNFIEAYLR 297
>gi|116072022|ref|ZP_01469290.1| peptide chain release factor 2 [Synechococcus sp. BL107]
gi|116065645|gb|EAU71403.1| peptide chain release factor 2 [Synechococcus sp. BL107]
Length = 356
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 253/331 (76%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ AQ+ ++ L +VK ++ L D+++ +DDA ++L E D
Sbjct: 17 DLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLKQLADWRSAIDDAKATLELYEL--EADE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA + EL + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E + + E S GEEAGIKSA IEVEGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGIEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHLPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTQEETNDVQAVMDGALDPFIDASLR 344
>gi|126657098|ref|ZP_01728269.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
gi|126621641|gb|EAZ92351.1| peptide chain release factor 2 [Cyanothece sp. CCY0110]
Length = 358
Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 257/341 (75%), Gaps = 2/341 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ + LE AA FWD AQ+TLQ L D+K ++ + +++D I +L
Sbjct: 14 LPALKANIKNLENTAAQPQFWDEPETAQKTLQKLNDLKSQLEQYQQWCEQLEDTEAIAEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D D L EA I +LN LD++EL QLLSG YD +GAV++I AGAGGTDAQDW
Sbjct: 74 LELED--DTTLRREAQENITQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQDW 131
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+EG YA+GYL GEKGTHR+VR
Sbjct: 132 AQMLLRMYTRWGEQQGYKVNLTELSEGDEAGIKSATLEIEGCYAFGYLKGEKGTHRLVRI 191
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPFNA G RQTSF+G EVMP+L E+ + V IP++DL+IS SR+GGKGGQNVNKVETAVRI
Sbjct: 192 SPFNANGKRQTSFAGVEVMPMLEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVRI 251
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +IRGD V+A WG QI
Sbjct: 252 VHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAEIRGDMVEAAWGNQI 311
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
RNYVFHPY++VKD+RT ET+D+ VMDG L+ FI++YL+Y
Sbjct: 312 RNYVFHPYQMVKDLRTNVETTDVTGVMDGNLDSFIEAYLRY 352
>gi|78185691|ref|YP_378125.1| peptide chain release factor 2 [Synechococcus sp. CC9902]
gi|78169985|gb|ABB27082.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus sp.
CC9902]
Length = 356
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 253/331 (76%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ AQ+ ++ L +VK ++ L D+++ +DDA ++L E D
Sbjct: 17 DLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLADWRSAIDDAKATLELYEL--EADE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA + EL + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 EMLGEAQQGLTELRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E + + E S GEEAGIKSA IEVEGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHDMRVTIDEISEGEEAGIKSATIEVEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGIEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRIQHLPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTQEETNDVQAVMDGALDPFIDASLR 344
>gi|416376039|ref|ZP_11683417.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 0003]
gi|357266445|gb|EHJ15072.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 0003]
Length = 358
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 259/341 (75%), Gaps = 2/341 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ + +LE +A FWD AQ TLQ L D+K ++ + ++DD I +L
Sbjct: 14 LPALKAAIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAIAEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA L +EA I +LN LD++EL QLLSG YD +GAV++I AGAGGTDAQDW
Sbjct: 74 LELED--DATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQDW 131
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+EGRYA+GYL GEKGTHR+VR
Sbjct: 132 AQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVRI 191
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPFNA G RQTSF+G E+MP L E+ + V IP++DL+IS SR+GGKGGQNVNKVETAVR+
Sbjct: 192 SPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVRV 251
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IAEEQRA EI +IRGD V+A WG QI
Sbjct: 252 VHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWGTQI 311
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
RNYVFHPY++VKD+RT ET+D+ VMDG L+ FI++YL++
Sbjct: 312 RNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYLRF 352
>gi|254422250|ref|ZP_05035968.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
gi|196189739|gb|EDX84703.1| peptide chain release factor 2 [Synechococcus sp. PCC 7335]
Length = 345
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 196/347 (56%), Positives = 261/347 (75%), Gaps = 3/347 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+ ++ +LE +A FWD + AQ++LQ L D K ++ + + T ++D+ I++L +
Sbjct: 1 MNAKIKDLEQLSAQPDFWDEQESAQKSLQELNDYKANLDQVEGWSTSLEDSEAILELLDL 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D LL EA S + L+K LDQ+EL QLLSGPYDK GAV++I AGAGGTDAQDW++M
Sbjct: 61 --EQDESLLLEAESTVNRLSKELDQWELQQLLSGPYDKAGAVLTINAGAGGTDAQDWSEM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW E+ Y+ +++EKS G+EAG+KS +EV GRYAYGYL GEKGTHR+VR SPF
Sbjct: 119 LLRMYTRWSEQNGYQFKLIEKSEGDEAGLKSVTMEVYGRYAYGYLKGEKGTHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
NA G RQTSF+G EVMP+L ++ +++ IP++DLEI SR+GG GGQNVNKVETAVRITH+
Sbjct: 179 NANGKRQTSFAGVEVMPIL-DQKVELDIPDKDLEIKTSRSGGAGGQNVNKVETAVRITHL 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PT ++VRCT+ERSQL NK KA++ L +KLLVIA+EQR I IRGD V+A WG QIRNY
Sbjct: 238 PTSISVRCTQERSQLQNKEKAMALLTSKLLVIAQEQRTQAIADIRGDMVEAAWGNQIRNY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
VFHPY++VKD+RT ET+ + VM+G+LE FI++YL + + L +
Sbjct: 298 VFHPYQMVKDLRTSVETTAVDDVMNGDLEAFIQAYLHQENQLILETT 344
>gi|352095544|ref|ZP_08956558.1| Peptide chain release factor 2 [Synechococcus sp. WH 8016]
gi|351678686|gb|EHA61831.1| Peptide chain release factor 2 [Synechococcus sp. WH 8016]
Length = 356
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/331 (61%), Positives = 250/331 (75%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ AQ+ ++ L +VK ++ L D++ +DD ++L E D
Sbjct: 17 DLEQLAAQPDFWNDQQNAQKQMRRLDEVKAQLQQLVDWRGAIDDGQATLELYEL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL EA + L +ALD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DLLGEAQQGLNRLRQALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E Q V E S GEEAGIKS IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDQGMSVTVNELSEGEEAGIKSTTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE +D+ IPE+DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGVEVMPKLDEE-VDLDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG+L PFI++ L+
Sbjct: 314 MVKDLRTQEETTDVQGVMDGDLNPFIQALLR 344
>gi|67920292|ref|ZP_00513812.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
gi|67857776|gb|EAM53015.1| Peptide chain release factor 2 [Crocosphaera watsonii WH 8501]
Length = 358
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 208/341 (60%), Positives = 259/341 (75%), Gaps = 2/341 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ + +LE +A FWD AQ TLQ L D+K ++ + ++DD I +L
Sbjct: 14 LPALKAVIKDLENTSAQPQFWDQPETAQTTLQELNDLKSQLEQYQQWCLQLDDTKAIAEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA L +EA I +LN LD++EL QLLSG YD +GAV++I AGAGGTDAQDW
Sbjct: 74 LELED--DATLRQEAEDNIIQLNHNLDRWELQQLLSGIYDTKGAVLTINAGAGGTDAQDW 131
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+EGRYA+GYL GEKGTHR+VR
Sbjct: 132 AQMLLRMYTRWGEQQGYKVHLTELSEGDEAGIKSATLEIEGRYAFGYLKGEKGTHRLVRI 191
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPFNA G RQTSF+G E+MP L E+ + V IP++DL+IS SR+GGKGGQNVNKVETAVR+
Sbjct: 192 SPFNANGKRQTSFAGIEIMPALEEDDLKVDIPDKDLDISTSRSGGKGGQNVNKVETAVRV 251
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IAEEQRA EI +IRGD V+A WG QI
Sbjct: 252 VHVPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAEEQRAQEIAEIRGDIVEAAWGTQI 311
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
RNYVFHPY++VKD+RT ET+D+ VMDG L+ FI++YL++
Sbjct: 312 RNYVFHPYQMVKDLRTNIETTDVNGVMDGSLDEFIEAYLRF 352
>gi|434389323|ref|YP_007099934.1| peptide chain release factor 2 [Chamaesiphon minutus PCC 6605]
gi|428020313|gb|AFY96407.1| peptide chain release factor 2 [Chamaesiphon minutus PCC 6605]
Length = 371
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/371 (54%), Positives = 270/371 (72%), Gaps = 3/371 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D ++++D+ SDR+ + + + L ++ +LE AA FWDN+ AQ +Q L
Sbjct: 1 MIDLVDIKRDINTLSDRLGKTQQYLDIPALTAKIQDLEQVAAQPEFWDNQNVAQAAMQEL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
D K + +++ + DA T ++L E D L +EA + +++ LD++EL QL
Sbjct: 61 NDYKSHLEQFQHWQSSVADAQTALELLEL--EPDEALYQEAKQNLSQMSLELDRWELEQL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD +GA+++I AGAGGTDAQDWA+MLLRMY RW E ++YK ++ E S GEEAG+KS
Sbjct: 119 LSGTYDAKGAILTINAGAGGTDAQDWAEMLLRMYTRWAEDRKYKVQLAEISEGEEAGLKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EG+YAYGYL EKGTHR+VR SPFNA RQTSF+G EVMPL+ + S+ + IP+
Sbjct: 179 ATLEIEGKYAYGYLRSEKGTHRLVRISPFNANDKRQTSFAGVEVMPLI-DNSVQLDIPDT 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEI+ +RAGGKGGQNVNKVETAVRI H PTGV VRCT+ERSQL NK KAL LKAKLL+
Sbjct: 238 DLEITTTRAGGKGGQNVNKVETAVRIVHKPTGVAVRCTQERSQLQNKEKALVILKAKLLI 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA+EQ+ EI +IRGD V+A WGQQIRNYVFHPY++VKD+RT ET+ + VM+GE++ F
Sbjct: 298 IAQEQKTKEIAEIRGDMVEAAWGQQIRNYVFHPYQMVKDLRTSVETTAVGDVMNGEIDEF 357
Query: 361 IKSYLKYKYSM 371
I++YL+ + M
Sbjct: 358 IEAYLRQENMM 368
>gi|254432093|ref|ZP_05045796.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
gi|197626546|gb|EDY39105.1| peptide chain release factor 2 [Cyanobium sp. PCC 7001]
Length = 358
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/330 (62%), Positives = 249/330 (75%), Gaps = 3/330 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ AQ+ ++ L DVK ++ L +K + DA ++L E D
Sbjct: 17 DLEQLASQPDFWDDQQAAQKQMRQLDDVKAQLEQLERWKAAVSDAEATLELHEL--EPDG 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LLEEA + + L LD++EL +LLSGPYDKEGAV++I AGAGGTDAQDWA MLLRMY
Sbjct: 75 DLLEEANAGLTSLRGDLDRWELERLLSGPYDKEGAVLTINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E V E S GEEAGIKSA IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMTVSVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP + EE + + IP++DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
LVKD+RT HET+D+ VMDG+L+PFI+S L
Sbjct: 314 LVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343
>gi|88809865|ref|ZP_01125371.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
gi|88786249|gb|EAR17410.1| peptide chain release factor 2 [Synechococcus sp. WH 7805]
Length = 356
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 251/331 (75%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK + L ++ + DA ++L + D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLETWQGAVSDAQATLELYDL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DMLGEAQGGLNQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E + K V E S GEEAGIKSA IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG+LEPFI++ L+
Sbjct: 314 MVKDLRTQEETNDVQGVMDGDLEPFIQALLR 344
>gi|148240661|ref|YP_001226048.1| peptide chain release factor 2 [Synechococcus sp. WH 7803]
gi|147849200|emb|CAK24751.1| Protein chain release factor B [Synechococcus sp. WH 7803]
Length = 356
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/331 (60%), Positives = 252/331 (76%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK + L ++ + DA ++L + D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAMLQQLDTWQGAVSDAQATLELYDL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA S + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DMLGEAQSGLTQLRRDLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E + K V E S GEEAGIKSA IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDRGMKVTVDELSEGEEAGIKSATIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEDVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG+L+PFI++ L+
Sbjct: 314 MVKDLRTQEETNDVQGVMDGDLDPFIQALLR 344
>gi|384249824|gb|EIE23305.1| peptide chain release factor 2 [Coccomyxa subellipsoidea C-169]
Length = 368
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/364 (55%), Positives = 262/364 (71%), Gaps = 8/364 (2%)
Query: 14 ASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDF 73
A+ +VEE L L + A LE A+D +FW+++ AQ TLQ ++++K + + F
Sbjct: 6 AAKQVEEAAHVTNLISLRDQYAALEQAASDGAFWEDQESAQATLQQMSELKGIVQEVEGF 65
Query: 74 KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
+ + D T ++L E M++ L E ++ L K L ++EL +LL G YDK A +S
Sbjct: 66 QGLLGDVQTAIELAE-MEAGPFCL--EGVEALERLQKGLARWELQRLLGGEYDKGSATLS 122
Query: 134 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSL-----GEEAGIKSAVIEVEGR 188
I AGAGGTDA DWA+ L RMY RW EKQ YKTR + L GEEAG+KS +EV GR
Sbjct: 123 IQAGAGGTDAMDWAEKLERMYTRWAEKQGYKTRSLSFLLCNVQSGEEAGVKSVEMEVHGR 182
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
YAYGYL+GEKGTHR+VRQSPFNAK RQTSF+ EVMP+L E++ V+IPE DLEI+ +R
Sbjct: 183 YAYGYLAGEKGTHRLVRQSPFNAKAARQTSFAAVEVMPILGEKATQVEIPESDLEITTTR 242
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+ G GGQNVNK+ET VRI HIPTG+ VRC ++RSQL NK A+ +LKAKL+V+ +EQ+A
Sbjct: 243 SQGAGGQNVNKLETCVRIKHIPTGIAVRCQQQRSQLQNKALAMEQLKAKLVVVQQEQQAR 302
Query: 309 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
EI +IRGD VKAEWGQQIRNYVFHPYKLVKDVRTG ETSD+ VMDG+++ F+++YL++K
Sbjct: 303 EIAEIRGDIVKAEWGQQIRNYVFHPYKLVKDVRTGMETSDVPGVMDGDIDQFVQAYLRHK 362
Query: 369 YSMS 372
+S
Sbjct: 363 GRLS 366
>gi|87123562|ref|ZP_01079413.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
gi|86169282|gb|EAQ70538.1| Peptide chain release factor 2 [Synechococcus sp. RS9917]
Length = 356
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/331 (60%), Positives = 250/331 (75%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ AQ+ ++ L +VK ++ L ++ +DDA ++L + D
Sbjct: 17 DLEQLASQPDFWDDQPNAQKQMRRLDEVKAQLQQLEQWRGAIDDAQATLELYDL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA + L ALD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DMLSEAQEGLTTLRHALDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKSA IE++GRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVSVDELSEGEEAGIKSATIEIDGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L E+ +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EDEVDIDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG L+PFI++ L+
Sbjct: 314 MVKDLRTQEETTDVQGVMDGHLDPFIQALLR 344
>gi|33239657|ref|NP_874599.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237182|gb|AAP99251.1| Protein chain release factor B [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 356
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/330 (60%), Positives = 256/330 (77%), Gaps = 3/330 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FW+++ +A++ ++ L +VKD++ L ++ ++DA ++L E D
Sbjct: 17 DLEQIAAQPDFWNDQQKARKQMRQLDEVKDQLTKLANWNAAIEDAKVSLELYEL--EPDN 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
++EEA + +L LD +EL +LLSGPYDKEGAV++I AGAGGTDAQDWA MLLRMY+
Sbjct: 75 EMIEEAQIGLCQLKTELDLWELERLLSGPYDKEGAVLAINAGAGGTDAQDWAQMLLRMYM 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K + E S GEEAGIKSA IE+EGRYAYGYL EKGTHR+VR SPFNA G R
Sbjct: 135 RWAESHGMKVILSELSEGEEAGIKSATIEIEGRYAYGYLQNEKGTHRLVRISPFNANGKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE + ++IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGIEVMPQL-EEDVHLEIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKL++IA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMIIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+VKD+R+G E++D+ SVM+G+L+ FI+S L
Sbjct: 314 MVKDLRSGTESNDVESVMNGDLDLFIQSLL 343
>gi|186681801|ref|YP_001864997.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
gi|186464253|gb|ACC80054.1| peptide chain release factor 2 [Nostoc punctiforme PCC 73102]
Length = 289
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/274 (69%), Positives = 229/274 (83%), Gaps = 1/274 (0%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
TD LL+EA S I +LN+ LDQ+EL QLLSGPYD EGAV++I+AGAGGTDAQDWA ML+R
Sbjct: 6 TDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTISAGAGGTDAQDWAFMLMR 65
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RWGE YK + E+S G+EAGIKSA +E+ GRYAYGYL E GTHR+VR SPFNA
Sbjct: 66 MYTRWGEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRSEMGTHRLVRISPFNAN 125
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G EVMP + + S+ ++IP++DLEI+ +R+GGKGGQNVNKVETAVRI HIPTG
Sbjct: 126 GKRQTSFAGVEVMPQI-DNSVQLEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHIPTG 184
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ VRCTEERSQL NK KAL+RLKAKLLVIA+EQRA EI +IRGD V+A WG QIRNYVFH
Sbjct: 185 LAVRCTEERSQLQNKEKALNRLKAKLLVIAKEQRAQEIAEIRGDMVEASWGNQIRNYVFH 244
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
PY++VKD+RT ET+ I VM+GEL+PFI++YL+
Sbjct: 245 PYQMVKDLRTNTETTAIGDVMNGELDPFIQAYLR 278
>gi|116074014|ref|ZP_01471276.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
gi|116069319|gb|EAU75071.1| peptide chain release factor 2 [Synechococcus sp. RS9916]
Length = 356
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/330 (61%), Positives = 248/330 (75%), Gaps = 3/330 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK ++ L +K +DDA V+L D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLEQLNQWKRAVDDADATVELYAL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA + + +L LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA ML+RMY
Sbjct: 75 DMLGEAQTGLTQLRTELDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWALMLMRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEDVQLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+VKD+RT HET+D+ VMDG+L+PFI+S L
Sbjct: 314 MVKDLRTQHETNDVQGVMDGDLDPFIQSLL 343
>gi|260436566|ref|ZP_05790536.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
gi|260414440|gb|EEX07736.1| peptide chain release factor 2 [Synechococcus sp. WH 8109]
Length = 356
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/331 (61%), Positives = 252/331 (76%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK +++ L ++ +DDA ++L E +D D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLAGWRGAVDDAQATLELYE-LDP-DE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL+EA + + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEDVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVF PY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFQPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTNEETNDVQAVMDGALDPFIDACLR 344
>gi|291568918|dbj|BAI91190.1| peptide chain release factor 2 [Arthrospira platensis NIES-39]
Length = 316
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/307 (62%), Positives = 242/307 (78%), Gaps = 2/307 (0%)
Query: 60 LTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQ 119
++D+K + D++ ++D I +L E D D L +EA S + L + +D++EL Q
Sbjct: 1 MSDLKSVLQQQQDWRKTLEDTGAIAELLELED--DESLRQEAESNVVHLGRDIDRWELQQ 58
Query: 120 LLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIK 179
LLSGPYD+ GAV++I AGAGGTDAQDWA+MLLRMY RWGE Q YK + E S G+EAGIK
Sbjct: 59 LLSGPYDRSGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIK 118
Query: 180 SAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPE 239
SA +E+EG YAYGYL EKGTHR+VR SPFNA G RQTSF+G E+MP+L E ++++ IPE
Sbjct: 119 SATLEMEGPYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPE 178
Query: 240 EDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLL 299
+DLEI+ SRAGGKGGQNVNKVETAVRI HIPTG+ VRCT+ERSQL N+ KA++ LKAKLL
Sbjct: 179 KDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLL 238
Query: 300 VIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEP 359
V+A+EQRA I +IRGD V+A WG QIRNYVFHPY++VKD+RTG ET+ I VM+GEL+
Sbjct: 239 VVAQEQRAQAIAEIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDG 298
Query: 360 FIKSYLK 366
FI++YL+
Sbjct: 299 FIQAYLR 305
>gi|414076417|ref|YP_006995735.1| peptide chain release factor 2 [Anabaena sp. 90]
gi|413969833|gb|AFW93922.1| peptide chain release factor 2 [Anabaena sp. 90]
Length = 315
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/310 (62%), Positives = 239/310 (77%), Gaps = 3/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q L D+K ++ + +DD +V+L E TD LLEEA S I +LN LDQ+E
Sbjct: 1 MQELNDLKSHLDQYYKWHANLDDTRVVVELLEL--ETDTALLEEAESTISKLNHDLDQWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
L QLLSG YD +GAV++I AGAGGTDAQDWA ML+RMY RW E YK + E+S GEEA
Sbjct: 59 LQQLLSGTYDDKGAVLTINAGAGGTDAQDWAFMLMRMYTRWAEDHSYKVTLAEESKGEEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKS +E+ GRYAYGYL E GTHR+VR SPFNA G RQTSF+G EVMP + + ++ +
Sbjct: 119 GIKSVTLEITGRYAYGYLRSEMGTHRLVRISPFNANGKRQTSFAGIEVMPQI-DNTVKLD 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
IPE+DL+IS +R+GGKGGQNVNKVETAVRI H+PTG+ VRCTEERSQL NK KAL+RLKA
Sbjct: 178 IPEKDLDISTTRSGGKGGQNVNKVETAVRIVHLPTGLAVRCTEERSQLQNKEKALARLKA 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
KLL+IA+EQRA EI +IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I VM+GE
Sbjct: 238 KLLIIAKEQRAQEIAEIRGDMVEASWGNQIRNYVFHPYQMVKDLRTNIETTAITDVMNGE 297
Query: 357 LEPFIKSYLK 366
L+ FI++YL+
Sbjct: 298 LDMFIQAYLR 307
>gi|326493842|dbj|BAJ85383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/217 (87%), Positives = 203/217 (93%)
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RWG KQRYK+RVVEKS GEEAGIKSA +E+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLR
Sbjct: 13 RWGGKQRYKSRVVEKSPGEEAGIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 72
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMPLLPEES+DV+IPEEDL+ISF+RAGGKGGQNVNKVETAVR+ HIPTG+ V
Sbjct: 73 QTSFAGVEVMPLLPEESLDVEIPEEDLDISFTRAGGKGGQNVNKVETAVRMVHIPTGIAV 132
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RC EERSQLANKIKAL RLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK
Sbjct: 133 RCAEERSQLANKIKALRRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 192
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
LVKDVRT ETSDI VMDGEL+PFIK+YL+YK S +
Sbjct: 193 LVKDVRTACETSDISGVMDGELDPFIKAYLQYKLSAA 229
>gi|427704047|ref|YP_007047269.1| peptide chain release factor 2 [Cyanobium gracile PCC 6307]
gi|427347215|gb|AFY29928.1| peptide chain release factor 2 [Cyanobium gracile PCC 6307]
Length = 355
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/341 (59%), Positives = 256/341 (75%), Gaps = 3/341 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ +AQ+ ++ L +VK ++ L ++ +DDA ++L + D
Sbjct: 17 DLEQLASQPGFWDDQQQAQKQMRQLDEVKAQLEQLQQWQAAIDDARATLELYDL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL EA ++ L ALD++EL +LLSGPYDKEGAVISI AGAGGTDAQDWA ML+RMY
Sbjct: 75 ELLGEANGGLQSLKGALDRWELERLLSGPYDKEGAVISINAGAGGTDAQDWALMLMRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE++GRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVTVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE + + IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEEVKLDIPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
+VKD+RTG ET+D+ VMDG+L+PFI+S L+ ++ A+
Sbjct: 314 MVKDLRTGEETTDVQGVMDGDLDPFIQSLLRQGVEIAADAA 354
>gi|318040666|ref|ZP_07972622.1| peptide chain release factor 2 [Synechococcus sp. CB0101]
Length = 356
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 200/330 (60%), Positives = 249/330 (75%), Gaps = 3/330 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ +AQ ++ L +VK ++ L+ ++ + DA V++ D
Sbjct: 17 DLEQLASQPDFWDDQKQAQAKMRQLDEVKAQLEQLSQWQGAVADAEATVEIYGL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL E+ +++L LD++EL +LLSGPYDKEGAVISI AGAGGTDAQDWA ML+RMY
Sbjct: 75 ELLSESNEALQKLRSDLDRWELERLLSGPYDKEGAVISINAGAGGTDAQDWALMLMRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP + EE + + IP++DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPDKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+VKD+RT HET+D+ VMDG+L+PFI+S L
Sbjct: 314 MVKDLRTQHETTDVQGVMDGDLDPFIQSLL 343
>gi|37520802|ref|NP_924179.1| peptide chain release factor 2 [Gloeobacter violaceus PCC 7421]
gi|35211797|dbj|BAC89174.1| peptide chain release factor [Gloeobacter violaceus PCC 7421]
Length = 354
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/343 (55%), Positives = 258/343 (75%), Gaps = 3/343 (0%)
Query: 29 QLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE 88
Q + +A LE +A+ FWD++A AQ+ LQ L ++K + ++ + DA +++L +
Sbjct: 15 QRQIRIAALEQQASAPDFWDDQAAAQKALQNLNNLKQPLEQFGRWRNLLSDAEVVLELVQ 74
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
E + D LL EA I+ L LD++EL QLLSGPYD+ GA++SI AGAGGTDAQDWA+
Sbjct: 75 E--TGDESLLPEAEGNIEALVGELDRWELEQLLSGPYDERGAILSINAGAGGTDAQDWAE 132
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
MLLRMY RW E+Q Y+ ++E S GEEAG+KSA +E++GRYAYGYLS EKGTHR+VR SP
Sbjct: 133 MLLRMYTRWAERQGYQAHLLELSEGEEAGVKSATLEIDGRYAYGYLSAEKGTHRLVRISP 192
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
FNA RQTSF+G EVMP+L ++S+ V I +D+EI R+GGKGGQNVNKVET VR+TH
Sbjct: 193 FNANDKRQTSFAGVEVMPVL-DDSVQVDIRPDDIEIDTFRSGGKGGQNVNKVETGVRVTH 251
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
PTG++VRCT+ER+QL N+ KA+ LKA+LLV+ EE+R + IRG+AV A WG QIR+
Sbjct: 252 KPTGISVRCTQERAQLQNRNKAMEMLKARLLVLEEEKRQQHLSDIRGEAVDAAWGNQIRS 311
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
YVFHPY++VKD+RT ETSD+ VM+G++EPFI+ YL+ ++ +
Sbjct: 312 YVFHPYQMVKDLRTEEETSDVTGVMNGKIEPFIERYLRRQHKL 354
>gi|317968157|ref|ZP_07969547.1| peptide chain release factor 2 [Synechococcus sp. CB0205]
Length = 356
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/342 (59%), Positives = 254/342 (74%), Gaps = 3/342 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ AQ ++ L +VK ++ L+ +K + DA V++ D
Sbjct: 17 DLEQLASQPDFWDDQKLAQSKMRQLDEVKAQLEQLSQWKGAVADAEATVEIYGL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL E+ + +K+L LD++EL +LLSG YDKEGAVISI AGAGGTDAQDWA ML+RMY
Sbjct: 75 ELLSESDAALKKLRADLDRWELERLLSGTYDKEGAVISINAGAGGTDAQDWALMLMRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVTVDELSDGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
+VKD+RT HET+D+ VMDG+L+PFI+S L ++ ++SD
Sbjct: 314 MVKDLRTQHETTDVQGVMDGDLDPFIQSLLHAGVEVAGASSD 355
>gi|78213950|ref|YP_382729.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
gi|78198409|gb|ABB36174.1| peptide chain release factor 2 [Synechococcus sp. CC9605]
Length = 356
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/331 (60%), Positives = 250/331 (75%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE AA FWD++ AQ+ ++ L +VK +++ L ++ +DDA ++L E D
Sbjct: 17 DLEQLAAQPDFWDDQQNAQKQMRRLDEVKAQLSQLGGWRGAVDDAQATLELYEL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL+EA + + +L + LD++EL +LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 DLLQEAQNGLNQLRQGLDRWELERLLSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE+EGRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVTVDELSEGEEAGIKSCTIEIEGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP + EE + + IPE+DLEI+ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKI-EEEVKLDIPEKDLEITTSRSGGAGGQNVNKVETAVRILHIPTGLFV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRA+EI IRGD V+A WG QIRNYVF PY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFQPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ +VMDG L+PFI + L+
Sbjct: 314 MVKDLRTNEETNDVQAVMDGALDPFIDASLR 344
>gi|17227769|ref|NP_484317.1| peptide chain release factor 2 [Nostoc sp. PCC 7120]
gi|17135251|dbj|BAB77797.1| peptide chain release factor [Nostoc sp. PCC 7120]
Length = 292
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/274 (68%), Positives = 226/274 (82%), Gaps = 1/274 (0%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
TD LL+EA S I +LN+ LDQ+EL QLLSGPYD EGAV++I AGAGGTDAQDWA MLLR
Sbjct: 9 TDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLLR 68
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RW E Q YK + E+S G+EAGIKSA +E+ GRYAYGYL E GTHR+VR SPFNA
Sbjct: 69 MYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNAN 128
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G EVMP L + ++ + IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG
Sbjct: 129 GKRQTSFAGVEVMPQL-DNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTG 187
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ VRCTEERSQL NK KAL+RLKAKLLVIA+EQ+A EI QIRGD V+A WG QIRNYVFH
Sbjct: 188 IAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFH 247
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
PY++VKD+RT ET+ I VM+GEL+ FI+SYL+
Sbjct: 248 PYQMVKDLRTNVETTAIADVMNGELDMFIQSYLR 281
>gi|75908996|ref|YP_323292.1| peptide chain release factor 2 [Anabaena variabilis ATCC 29413]
gi|75702721|gb|ABA22397.1| bacterial peptide chain release factor 2 (bRF-2) [Anabaena
variabilis ATCC 29413]
Length = 292
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/274 (68%), Positives = 226/274 (82%), Gaps = 1/274 (0%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
TD LL+EA S I +LN+ LDQ+EL QLLSGPYD EGAV++I AGAGGTDAQDWA MLLR
Sbjct: 9 TDEALLQEAESTITKLNRDLDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLLR 68
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RW E Q YK + E+S G+EAGIKSA +E+ GRYAYGYL E GTHR+VR SPFNA
Sbjct: 69 MYTRWAEDQGYKVALAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNAN 128
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G EVMP L + ++ + IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG
Sbjct: 129 GKRQTSFAGVEVMPQL-DNTVQLDIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTG 187
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ VRCTEERSQL NK KAL+RLKAKLLVIA+EQ+A EI QIRGD V+A WG QIRNYVFH
Sbjct: 188 IAVRCTEERSQLQNKEKALARLKAKLLVIAQEQKAQEIAQIRGDMVEASWGNQIRNYVFH 247
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
PY++VKD+RT ET+ I VM+GEL+ FI++YL+
Sbjct: 248 PYQMVKDLRTNAETTAIADVMNGELDMFIQAYLR 281
>gi|409993206|ref|ZP_11276356.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
gi|409935920|gb|EKN77434.1| peptide chain release factor 2 [Arthrospira platensis str. Paraca]
Length = 309
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/295 (64%), Positives = 236/295 (80%), Gaps = 2/295 (0%)
Query: 72 DFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAV 131
D++ ++D I +L E D D L +EA S + L + +D++EL QLLSGPYD+ GAV
Sbjct: 6 DWRKTLEDTGAIAELLELED--DESLRQEAESNVVHLGRDIDRWELQQLLSGPYDRSGAV 63
Query: 132 ISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAY 191
++I AGAGGTDAQDWA+MLLRMY RWGE Q YK + E S G+EAGIKSA +E+EG YAY
Sbjct: 64 LTINAGAGGTDAQDWAEMLLRMYTRWGEAQGYKVHLAELSEGDEAGIKSATLEMEGPYAY 123
Query: 192 GYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGG 251
GYL EKGTHR+VR SPFNA G RQTSF+G E+MP+L E ++++ IPE+DLEI+ SRAGG
Sbjct: 124 GYLKAEKGTHRLVRISPFNANGKRQTSFAGVEIMPILDEGAINLDIPEKDLEITTSRAGG 183
Query: 252 KGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIK 311
KGGQNVNKVETAVRI HIPTG+ VRCT+ERSQL N+ KA++ LKAKLLV+A+EQRA I
Sbjct: 184 KGGQNVNKVETAVRIVHIPTGIAVRCTQERSQLQNREKAMALLKAKLLVVAQEQRAQAIA 243
Query: 312 QIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+IRGD V+A WG QIRNYVFHPY++VKD+RTG ET+ I VM+GEL+ FI++YL+
Sbjct: 244 EIRGDLVEAAWGNQIRNYVFHPYQMVKDLRTGEETTAINDVMNGELDGFIQAYLR 298
>gi|87300848|ref|ZP_01083690.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
gi|87284719|gb|EAQ76671.1| peptide chain release factor 2 [Synechococcus sp. WH 5701]
Length = 355
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/331 (60%), Positives = 252/331 (76%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD++ +AQ+ ++ L +VK ++ L ++T +DDA ++L + D
Sbjct: 17 DLEQLASQPDFWDDQQQAQKQMRQLDEVKAQLEQLQQWRTAVDDARATLELYDL--EPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL EA ++ L ALD++EL +LLSGPYDKEGAVISI AGAGGTDAQDWA ML+RMY
Sbjct: 75 ELLSEANGGLQSLKAALDRWELERLLSGPYDKEGAVISINAGAGGTDAQDWALMLMRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K V E S GEEAGIKS IE++GRYAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWAEDHGMKVSVDELSEGEEAGIKSCTIEIDGRYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L EE + + IP++DLE++ SR+GG GGQNVNKVETAVRI H+PTG+ V
Sbjct: 195 QTSFAGVEVMPKL-EEDVKLDIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHVPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ L AKLLVIA+EQRASEI IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLMAKLLVIAQEQRASEIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG+L+PFI++ L+
Sbjct: 314 MVKDLRTAVETTDVQGVMDGDLDPFIQALLR 344
>gi|81299215|ref|YP_399423.1| peptide chain release factor 2 [Synechococcus elongatus PCC 7942]
gi|81168096|gb|ABB56436.1| bacterial peptide chain release factor 2 (bRF-2) [Synechococcus
elongatus PCC 7942]
Length = 304
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/283 (66%), Positives = 226/283 (79%), Gaps = 1/283 (0%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D L EEA + ++ L + LDQ+EL QLLSGPYD EGA++SI AGAGGTDAQDWA+MLLRM
Sbjct: 22 DPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAGGTDAQDWAEMLLRM 81
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E Q YK R+ E S GEEAGIKS +E+EG+YAYGYL EKGTHR+VR SPFNA
Sbjct: 82 YTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGYLKAEKGTHRLVRISPFNAND 141
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+G EVMP+L + +D++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+
Sbjct: 142 KRQTSFAGVEVMPVL-DTDIDLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGL 200
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
VRCTEERSQL NK KAL LKAKLLV+ +EQ+A E+ +IRGD V+A WG QIRNYVFHP
Sbjct: 201 AVRCTEERSQLQNKEKALVILKAKLLVVLQEQKAKEVAEIRGDMVEAAWGNQIRNYVFHP 260
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
Y+LVKD+RTG ET I VM+G+L PFI++YL+ M + +
Sbjct: 261 YQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQDNQMLIETT 303
>gi|119511140|ref|ZP_01630258.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
gi|119464235|gb|EAW45154.1| peptide chain release factor 2 [Nodularia spumigena CCY9414]
Length = 288
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/274 (68%), Positives = 225/274 (82%), Gaps = 1/274 (0%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
TD LL+EA S + +LN+ LDQ+EL QLLSGPYD EGAV++I AGAGGTDAQDWA ML+R
Sbjct: 5 TDEALLQEAESTVTKLNRELDQWELQQLLSGPYDAEGAVLTINAGAGGTDAQDWAFMLMR 64
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RW E YK + E+S G+EAGIKSA +E+ GRYAYGYL E GTHR+VR SPFNA
Sbjct: 65 MYTRWAEDHGYKVSLAEESEGDEAGIKSATLEITGRYAYGYLRSETGTHRLVRISPFNAN 124
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G E+MP L + S+ ++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG
Sbjct: 125 GKRQTSFAGVEIMPQL-DHSVQLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTG 183
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ VRCTEERSQL NK KAL+RLKAKLLVIA EQ+A E+ +IRGD V+A WG QIRNYVFH
Sbjct: 184 IAVRCTEERSQLQNKDKALARLKAKLLVIAREQKAQEVAEIRGDMVEASWGNQIRNYVFH 243
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
PY++VKD+RT ET+ I VMDG+L+ FI++YL+
Sbjct: 244 PYQMVKDLRTNVETTAISDVMDGDLDSFIQAYLR 277
>gi|16331171|ref|NP_441899.1| peptide chain release factor 2 [Synechocystis sp. PCC 6803]
gi|451815327|ref|YP_007451779.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|1653665|dbj|BAA18577.1| peptide chain release factor [Synechocystis sp. PCC 6803]
gi|451781296|gb|AGF52265.1| peptide chain release factor [Synechocystis sp. PCC 6803]
Length = 288
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/274 (67%), Positives = 225/274 (82%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D LL EA + +++L K LD++EL QLLSGPYD +GA ++I AGAGGTDAQDWA+MLLRM
Sbjct: 9 DQALLTEAETTLEQLQKELDRWELQQLLSGPYDAKGATLTINAGAGGTDAQDWAEMLLRM 68
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW EKQ YK + E S G+EAG+KS +E+EGRYAYGYL EKGTHR+VR SPFNA G
Sbjct: 69 YTRWSEKQGYKVHLAEISEGDEAGLKSVTLEIEGRYAYGYLKSEKGTHRLVRISPFNANG 128
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+G EVMPLL EE++ + IP++DL+IS SRAGGKGGQNVNKVETAVRI H+PTG+
Sbjct: 129 KRQTSFAGVEVMPLLGEEAISLDIPDKDLDISTSRAGGKGGQNVNKVETAVRIVHLPTGL 188
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
VRCT+ERSQL NK KAL+ LKAKLL++ EEQRA I +IRGD V+A WG QIRNYVFHP
Sbjct: 189 AVRCTQERSQLQNKEKALAILKAKLLIVLEEQRAQAIAEIRGDMVEAAWGTQIRNYVFHP 248
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
Y+LVKD+RT ET+D+ VMDGEL FI++YL++
Sbjct: 249 YQLVKDLRTNVETTDVGGVMDGELSDFIEAYLRH 282
>gi|56751121|ref|YP_171822.1| peptide chain release factor 2 [Synechococcus elongatus PCC 6301]
gi|56686080|dbj|BAD79302.1| peptide chain release factor RF-2 [Synechococcus elongatus PCC
6301]
Length = 304
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 187/283 (66%), Positives = 226/283 (79%), Gaps = 1/283 (0%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D L EEA + ++ L + LDQ+EL QLLSGPYD EGA++SI AGAGGTDAQDWA+MLLRM
Sbjct: 22 DPALFEEAETNVQRLQRELDQWELQQLLSGPYDAEGAILSINAGAGGTDAQDWAEMLLRM 81
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E Q YK R+ E S GEEAGIKS +E+EG+YAYGYL EKGTHR+VR SPFNA
Sbjct: 82 YTRWAEDQGYKVRITELSEGEEAGIKSVTLEIEGKYAYGYLKAEKGTHRLVRISPFNAND 141
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+G EVMP+L + +D++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+
Sbjct: 142 KRQTSFAGVEVMPVL-DTDIDLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGL 200
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
VRCTEERSQL NK KAL L+AKLLV+ +EQ+A E+ +IRGD V+A WG QIRNYVFHP
Sbjct: 201 AVRCTEERSQLQNKEKALVILRAKLLVVLQEQKAKEVAEIRGDMVEAAWGNQIRNYVFHP 260
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
Y+LVKD+RTG ET I VM+G+L PFI++YL+ M + +
Sbjct: 261 YQLVKDLRTGVETKAIADVMNGDLNPFIQAYLRQDNQMLIETT 303
>gi|282898121|ref|ZP_06306116.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
gi|281197265|gb|EFA72166.1| Peptide chain release factor 2 [Raphidiopsis brookii D9]
Length = 290
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/282 (65%), Positives = 229/282 (81%), Gaps = 1/282 (0%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D GLL+EA + I ++++ LDQ+EL QLLSGPYD +GAV++I AGAGGTDAQDWA ML+RM
Sbjct: 9 DEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDWAFMLMRM 68
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E YK + E+S G+EAGIKSA +E+ GRYAYGYL E GTHR+VR SPFNA G
Sbjct: 69 YTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRISPFNANG 128
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+G EVMP + + S+ ++IPE+DLE++ SRAGGKGGQNVNKVETAVRI HIPTG+
Sbjct: 129 KRQTSFAGVEVMPQI-DNSVTLEIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHIPTGI 187
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
VRCTEERSQL NK KAL+RLKAKLLVIA EQRA EI +IRGD V+A WG QIRNYVFHP
Sbjct: 188 AVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIRNYVFHP 247
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
Y++VKD+RT ET+ I+ VM+G+L+ FI++YL+ + + S
Sbjct: 248 YQIVKDLRTNLETTAIIDVMNGDLDNFIQAYLRQENQLVTSG 289
>gi|443323118|ref|ZP_21052128.1| peptide chain release factor 2 [Gloeocapsa sp. PCC 73106]
gi|442787173|gb|ELR96896.1| peptide chain release factor 2 [Gloeocapsa sp. PCC 73106]
Length = 302
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/292 (63%), Positives = 234/292 (80%), Gaps = 2/292 (0%)
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+++D I +L E+ DA L +EA + I LN ALD++EL QLLSGPYD +GAVI+I
Sbjct: 9 NQLEDTKAIAELLEQ--EADASLQQEAVTTISNLNLALDRWELQQLLSGPYDAKGAVITI 66
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
AGAGGTDAQDW +MLLRMY RW +KQ YK + E S G+EAGIKS +E+EGRYA+G L
Sbjct: 67 NAGAGGTDAQDWVEMLLRMYTRWSQKQGYKVHLAELSEGDEAGIKSVTLEIEGRYAFGSL 126
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
GEKGTHR+VR SPFNA G RQTSF+G EVMP L ++++V+IPE+DLEI+ SR+GGKGG
Sbjct: 127 KGEKGTHRLVRISPFNANGKRQTSFAGVEVMPALGLDAVNVEIPEKDLEITTSRSGGKGG 186
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
QNVNKVETAVR+ H+PTG+ VRCT+ERSQL NK KAL+ LKAKL++IA+EQRA I QIR
Sbjct: 187 QNVNKVETAVRVVHLPTGLAVRCTQERSQLQNKEKALTLLKAKLMIIAQEQRAQAIAQIR 246
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
GD V+A WG QIRNYVFHPY++VKD+RT ET+ + V+DGE++ FI++YL+
Sbjct: 247 GDMVEAAWGNQIRNYVFHPYQMVKDLRTNVETTAVEDVLDGEIDQFIEAYLQ 298
>gi|282900531|ref|ZP_06308475.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
CS-505]
gi|281194584|gb|EFA69537.1| Peptide chain release factor 2 [Cylindrospermopsis raciborskii
CS-505]
Length = 291
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 188/282 (66%), Positives = 228/282 (80%), Gaps = 1/282 (0%)
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D GLL+EA + I ++++ LDQ+EL QLLSGPYD +GAV++I AGAGGTDAQDWA ML+RM
Sbjct: 10 DEGLLQEAETTINQMHRDLDQWELQQLLSGPYDSQGAVLTINAGAGGTDAQDWAFMLMRM 69
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E YK + E+S G+EAGIKSA +E+ GRYAYGYL E GTHR+VR SPFNA G
Sbjct: 70 YTRWAEAHGYKVTLAEESEGDEAGIKSATLEITGRYAYGYLRAEMGTHRLVRISPFNANG 129
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+G EVMP + + S+ ++IPE+DLEI+ SRAGGKGGQNVNKVETAVRI HIPTGV
Sbjct: 130 KRQTSFAGVEVMPQI-DNSVTLEIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHIPTGV 188
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
VRCTEERSQL NK KAL+RLKAKLLVIA EQRA EI +IRGD V+A WG QIRNYVFHP
Sbjct: 189 AVRCTEERSQLQNKEKALARLKAKLLVIAREQRAQEIAEIRGDMVEASWGNQIRNYVFHP 248
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
Y++VKD+RT ET+ I VM+G+L+ FI++YL+ + + S
Sbjct: 249 YQIVKDLRTNLETTAIGDVMNGDLDNFIQAYLRQENQLVTSG 290
>gi|33864328|ref|NP_895888.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9313]
gi|33641108|emb|CAE22237.1| peptide-chain-release factor RF-2 [Prochlorococcus marinus str. MIT
9313]
Length = 375
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/366 (55%), Positives = 271/366 (74%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D + ++D+ +DR+ + + + L +LE AA FW+++ AQ+ ++ L
Sbjct: 1 MLDLTDFKRDLSELTDRLGQAQDCLDVPALNARQQDLEQLAAQPDFWNDQQNAQKQMRQL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+VK ++ +T +++ ++DA ++L + D +L EA S +K+L + LD++EL +L
Sbjct: 61 DEVKAQLTQITLWRSAVNDAQATLELYDL--EPDDEMLSEAQSGLKQLRQGLDRWELERL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY RW E V E S GEEAGIKS
Sbjct: 119 LSGEYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMTVTVDELSEGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A +E+EGRYAYGYL EKGTHR+VR SPFNA G RQTSF+G E+MP + +E +++ IPE+
Sbjct: 179 ATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQE-VELDIPEK 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ VRCT+ERSQL NK KAL+ LKAKL+V
Sbjct: 238 DLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKAKLMV 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA+EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +VM+G+L+ F
Sbjct: 298 IAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGDLDRF 357
Query: 361 IKSYLK 366
I++ L+
Sbjct: 358 IQTLLR 363
>gi|425457642|ref|ZP_18837341.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9807]
gi|389800946|emb|CCI19823.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9807]
Length = 330
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 251/326 (76%), Gaps = 2/326 (0%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA S+FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVSTFWDNPDTAQKTLQELNECKSYLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW EK
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEK 119
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Q YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF+
Sbjct: 120 QGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFA 179
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+E
Sbjct: 180 GVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQE 239
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD+
Sbjct: 240 RSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDL 299
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 300 RSNVETTDVTGVMNGDLDSFIEAYLR 325
>gi|159902739|ref|YP_001550083.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9211]
gi|159887915|gb|ABX08129.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9211]
Length = 356
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/330 (58%), Positives = 250/330 (75%), Gaps = 3/330 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FW+++ +A++ ++ L +VK ++ L D+ ++DA ++L E D
Sbjct: 17 DLEQIASQPEFWNDQQKAKKEMRRLDEVKAQLKKLVDWDAAIEDAQVSLELYEL--EPDD 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L EA + L LD +EL +LLSG YDKEG V+SI AGAGGTDAQDWA MLLRMY
Sbjct: 75 EMLAEAIKGLDNLKSDLDLWELERLLSGQYDKEGVVLSINAGAGGTDAQDWAQMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW + K V E S GEEAGIKSA +E++GRYAYGYL EKGTHR+VR SPFNA G R
Sbjct: 135 RWADDHGMKVTVDELSEGEEAGIKSATLEIDGRYAYGYLQNEKGTHRLVRISPFNANGKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G E+MP L EE +++ IPE+DLEI+ SR+GG GGQNVNKVETAVRI H+P+G+ V
Sbjct: 195 QTSFAGVEIMPKL-EEEVELDIPEKDLEITTSRSGGAGGQNVNKVETAVRIVHLPSGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKL++IA+EQRAS+I IRGD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMIIAQEQRASQIADIRGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+VKD+RTG E++D+ VM+G+L+PFI++ L
Sbjct: 314 MVKDLRTGKESTDVEGVMNGDLDPFIQALL 343
>gi|443327861|ref|ZP_21056468.1| peptide chain release factor 2 [Xenococcus sp. PCC 7305]
gi|442792472|gb|ELS01952.1| peptide chain release factor 2 [Xenococcus sp. PCC 7305]
Length = 314
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/310 (64%), Positives = 244/310 (78%), Gaps = 2/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q L D+K + + +DDA I +L E TD L EEA + + +L + LD +E
Sbjct: 1 MQELNDLKSNLAQYQQWHDVLDDAQAIAELLEL--ETDQALAEEAQTSLIQLKQELDLWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
L QLLSG YD GA+++I AGAGGTDAQDWA+MLLRMY RWGEKQ YK R+VE+S G+EA
Sbjct: 59 LQQLLSGTYDSRGAILTINAGAGGTDAQDWAEMLLRMYTRWGEKQGYKVRLVEESAGDEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKSA +E+EGRYAYGYL EKGTHR+VR SPFNA G RQTSF+G EVMP L +ES++++
Sbjct: 119 GIKSATLEIEGRYAYGYLKAEKGTHRLVRISPFNANGKRQTSFAGIEVMPNLGDESIELE 178
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
IPE+DLEI+ SRAGGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KAL+ LKA
Sbjct: 179 IPEKDLEITTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALALLKA 238
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
KLLV+ EEQRA ++ +IRGD V+A WG QIRNYVFHPY++VKD+RT +T DI VMDG
Sbjct: 239 KLLVVVEEQRAQQVAEIRGDMVEAAWGNQIRNYVFHPYQMVKDLRTELDTGDINDVMDGN 298
Query: 357 LEPFIKSYLK 366
L PFI++YL+
Sbjct: 299 LNPFIEAYLR 308
>gi|422303193|ref|ZP_16390547.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9806]
gi|425438279|ref|ZP_18818684.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9432]
gi|389676584|emb|CCH94420.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9432]
gi|389791881|emb|CCI12350.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9806]
Length = 336
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW EK
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEK 119
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Q YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF+
Sbjct: 120 QGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFA 179
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+E
Sbjct: 180 GVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQE 239
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD+
Sbjct: 240 RSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDL 299
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 300 RSNVETTDVTGVMNGDLDSFIEAYLR 325
>gi|425463014|ref|ZP_18842477.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9808]
gi|440756279|ref|ZP_20935480.1| peptide chain release factor 2 [Microcystis aeruginosa TAIHU98]
gi|389823793|emb|CCI27765.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9808]
gi|440173501|gb|ELP52959.1| peptide chain release factor 2 [Microcystis aeruginosa TAIHU98]
Length = 336
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW EK
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEK 119
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Q YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF+
Sbjct: 120 QGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFA 179
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+E
Sbjct: 180 GVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQE 239
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD+
Sbjct: 240 RSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDL 299
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 300 RSNVETTDVTGVMNGDLDSFIEAYLR 325
>gi|425444731|ref|ZP_18824775.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9443]
gi|389735466|emb|CCI01036.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9443]
Length = 334
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW EK
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEK 119
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Q YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF+
Sbjct: 120 QGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFA 179
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+E
Sbjct: 180 GVEVMPILGDDAVRVEIPDKDLEITTARSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQE 239
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD+
Sbjct: 240 RSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDL 299
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 300 RSNVETTDVTGVMNGDLDSFIEAYLR 325
>gi|425452562|ref|ZP_18832379.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 7941]
gi|389765600|emb|CCI08556.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 7941]
Length = 336
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 250/326 (76%), Gaps = 2/326 (0%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A + L LD++EL QLL+GPYD +GAV+++ AGAGGTDAQDW +MLLRMY RW EK
Sbjct: 60 ATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTVNAGAGGTDAQDWTEMLLRMYSRWAEK 119
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Q YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF+
Sbjct: 120 QGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFA 179
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+E
Sbjct: 180 GVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQE 239
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD+
Sbjct: 240 RSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDL 299
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 300 RSNVETTDVTGVMNGDLDSFIEAYLR 325
>gi|443667516|ref|ZP_21133963.1| peptide chain release factor 2 [Microcystis aeruginosa DIANCHI905]
gi|159027417|emb|CAO86901.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443331007|gb|ELS45688.1| peptide chain release factor 2 [Microcystis aeruginosa DIANCHI905]
Length = 330
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/326 (60%), Positives = 249/326 (76%), Gaps = 2/326 (0%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
AA +FWDN AQ+TLQ L + K + + +++D I++L E +D LLEE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQSWCEQLEDTKAIIELLEL--ESDRALLEE 59
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A I L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW EK
Sbjct: 60 ATDNITHLQHDLDRWELQQLLNGPYDPKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAEK 119
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Q YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF+
Sbjct: 120 QGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSFA 179
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G EVMP+L ++ + V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+E
Sbjct: 180 GVEVMPILGDDVVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQE 239
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD+
Sbjct: 240 RSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKDL 299
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 300 RSNVETTDVTGVMNGDLDSFIEAYLR 325
>gi|425469717|ref|ZP_18848630.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9701]
gi|389880407|emb|CCI38837.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9701]
Length = 336
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/327 (60%), Positives = 251/327 (76%), Gaps = 4/327 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLE 99
AA +FWDN AQ+TLQ L + K + + +++D I++L E E D T LLE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLELESDRT---LLE 58
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW E
Sbjct: 59 EATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAE 118
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
KQ YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF
Sbjct: 119 KQGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSF 178
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+
Sbjct: 179 AGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQ 238
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD
Sbjct: 239 ERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKD 298
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLK 366
+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 299 LRSNVETTDVTRVMNGDLDSFIEAYLR 325
>gi|166363701|ref|YP_001655974.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
gi|425440004|ref|ZP_18820315.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9717]
gi|425467766|ref|ZP_18847045.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9809]
gi|166086074|dbj|BAG00782.1| peptide chain release factor 2 [Microcystis aeruginosa NIES-843]
gi|389719660|emb|CCH96545.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9717]
gi|389829362|emb|CCI29359.1| Peptide chain release factor 2 [Microcystis aeruginosa PCC 9809]
Length = 330
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/327 (60%), Positives = 251/327 (76%), Gaps = 4/327 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLE 99
AA +FWDN AQ+TLQ L + K + + +++D I++L E E D T LLE
Sbjct: 2 AAVPTFWDNLDTAQKTLQELNECKSSLETYQGWCGQLEDTKAIIELLELESDRT---LLE 58
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW E
Sbjct: 59 EATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAE 118
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
KQ YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF
Sbjct: 119 KQGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSF 178
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+
Sbjct: 179 AGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQ 238
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD
Sbjct: 239 ERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKD 298
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLK 366
+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 299 LRSNVETTDVTRVMNGDLDSFIEAYLR 325
>gi|390439243|ref|ZP_10227653.1| Peptide chain release factor 2 [Microcystis sp. T1-4]
gi|389837370|emb|CCI31777.1| Peptide chain release factor 2 [Microcystis sp. T1-4]
Length = 336
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/327 (60%), Positives = 251/327 (76%), Gaps = 4/327 (1%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE-EMDSTDAGLLE 99
AA +FWDN AQ+TLQ L + K + + +++D I++L E E D T LLE
Sbjct: 2 AAVPTFWDNPDTAQKTLQELNECKSSLETYQGWCEQLEDTKAIIELLELESDRT---LLE 58
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA + L LD++EL QLL+GPYD +GAV++I AGAGGTDAQDW +MLLRMY RW E
Sbjct: 59 EATDNLTHLQHDLDRWELQQLLNGPYDAKGAVLTINAGAGGTDAQDWTEMLLRMYSRWAE 118
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
KQ YK + E S G+EAGIKS IE+ G YAYGYL GEKGTHR+VR SPFNA G RQTSF
Sbjct: 119 KQGYKVTLAEISEGDEAGIKSVTIEIAGTYAYGYLKGEKGTHRLVRISPFNANGKRQTSF 178
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
+G EVMP+L ++++ V+IP++DLEI+ +R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+
Sbjct: 179 AGVEVMPILGDDAVRVEIPDKDLEITTTRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQ 238
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQL NK KAL+ LKAKLL+IA EQ+A I +IRGD V+A WG QIRNYVFHPY+LVKD
Sbjct: 239 ERSQLQNKEKALALLKAKLLIIAREQQAQAIAEIRGDMVEAAWGNQIRNYVFHPYQLVKD 298
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLK 366
+R+ ET+D+ VM+G+L+ FI++YL+
Sbjct: 299 LRSNVETTDVSGVMNGDLDSFIEAYLR 325
>gi|413948643|gb|AFW81292.1| hypothetical protein ZEAMMB73_079544 [Zea mays]
Length = 377
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/199 (91%), Positives = 190/199 (95%)
Query: 145 DWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIV 204
DWADMLLRMYVRWGEKQRYKTRVVEKS GE+AGIKSA +E+EGRYAYGYLSGEKGTHRIV
Sbjct: 118 DWADMLLRMYVRWGEKQRYKTRVVEKSPGEQAGIKSATVELEGRYAYGYLSGEKGTHRIV 177
Query: 205 RQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAV 264
RQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAV
Sbjct: 178 RQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAV 237
Query: 265 RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQ 324
R+ HIPTG+ VRC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQ
Sbjct: 238 RMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQ 297
Query: 325 QIRNYVFHPYKLVKDVRTG 343
QIRNYVFHPYKLVKDVRTG
Sbjct: 298 QIRNYVFHPYKLVKDVRTG 316
>gi|414872707|tpg|DAA51264.1| TPA: hypothetical protein ZEAMMB73_478053 [Zea mays]
Length = 289
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/199 (91%), Positives = 190/199 (95%)
Query: 145 DWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIV 204
DWADMLLRMYVRWGEKQRYKTRVVEKS GE+AGIKSA +E+EGRYAYGYLSGEKGTHRIV
Sbjct: 30 DWADMLLRMYVRWGEKQRYKTRVVEKSPGEQAGIKSATVELEGRYAYGYLSGEKGTHRIV 89
Query: 205 RQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAV 264
RQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETAV
Sbjct: 90 RQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETAV 149
Query: 265 RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQ 324
R+ HIPTG+ VRC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWGQ
Sbjct: 150 RMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWGQ 209
Query: 325 QIRNYVFHPYKLVKDVRTG 343
QIRNYVFHPYKLVKDVRTG
Sbjct: 210 QIRNYVFHPYKLVKDVRTG 228
>gi|22298070|ref|NP_681317.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
gi|22294248|dbj|BAC08079.1| peptide chain release factor 2 [Thermosynechococcus elongatus BP-1]
Length = 290
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/272 (67%), Positives = 224/272 (82%), Gaps = 1/272 (0%)
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
A +++KEL+ L+++EL QLLSGPYDK A+++I AGAGGTDAQDWA+MLLRMY RW E+
Sbjct: 20 ATTLLKELDTQLNRWELEQLLSGPYDKNNAIVTINAGAGGTDAQDWAEMLLRMYTRWAER 79
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
Y+T + E S GEEAGIKSA +E+ GRYAYGYL EKGTHR+VR SPFNA G RQTSF+
Sbjct: 80 HGYQTHLAELSEGEEAGIKSATLEIRGRYAYGYLRSEKGTHRLVRISPFNANGKRQTSFA 139
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G +VMP L ++S+ V+IPE DLEI+ SR+GGKGGQNVNKVETAVRI H PTG+ VRCT+E
Sbjct: 140 GVDVMPEL-DQSVTVEIPESDLEITTSRSGGKGGQNVNKVETAVRIVHKPTGLAVRCTQE 198
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL NK KAL+ LKAKLLVIA+EQ+A EI IRG+AV+A WG QIRNYVFHPY+LVKD+
Sbjct: 199 RSQLQNKEKALAILKAKLLVIAQEQKAKEIADIRGEAVEAAWGNQIRNYVFHPYQLVKDL 258
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
RT ET+ I VMDG L+PFI++YL+ + + S
Sbjct: 259 RTEVETTAIQDVMDGNLDPFIQAYLRQQTAAS 290
>gi|254526132|ref|ZP_05138184.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9202]
gi|221537556|gb|EEE40009.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9202]
Length = 354
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 258/350 (73%), Gaps = 3/350 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A +FW+N+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESKQGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDW ++LLRMY RW + + + E S GEEAGIKS E++G+YAYGYL EKGT
Sbjct: 120 TDAQDWVEILLRMYSRWADNNQMTLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGT 179
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPFNA G RQTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKV
Sbjct: 180 HRLVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKV 238
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A
Sbjct: 239 ETAVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEA 298
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG QIRNYVFHPY++VKD+RT ET+D+ SV+DG LEPFI L+ S
Sbjct: 299 AWGNQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRMNIS 348
>gi|157412537|ref|YP_001483403.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9215]
gi|157387112|gb|ABV49817.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9215]
Length = 354
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 258/350 (73%), Gaps = 3/350 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A +FW+N+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPAFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESKQGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDW ++LLRMY RW + + + E S GEEAGIKS E++G+YAYGYL EKGT
Sbjct: 120 TDAQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGT 179
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPFNA G RQTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKV
Sbjct: 180 HRLVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKV 238
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A
Sbjct: 239 ETAVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEA 298
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG QIRNYVFHPY++VKD+RT ET+D+ SV+DG LEPFI L+ S
Sbjct: 299 AWGNQIRNYVFHPYQMVKDLRTMQETNDLDSVLDGGLEPFIHELLRMNIS 348
>gi|123967735|ref|YP_001008593.1| peptide chain release factor 2 [Prochlorococcus marinus str.
AS9601]
gi|123197845|gb|ABM69486.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
AS9601]
Length = 354
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/350 (54%), Positives = 257/350 (73%), Gaps = 3/350 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A FWDN+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRKELEQISAQPEFWDNQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESQLGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDW ++LLRMY RW + + + E S GEEAGIKS E+EG+YAYGYL EKGT
Sbjct: 120 TDAQDWVEILLRMYSRWADNNQMSLVINELSQGEEAGIKSVTFEIEGKYAYGYLQHEKGT 179
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPFNA G RQTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKV
Sbjct: 180 HRLVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKV 238
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A
Sbjct: 239 ETAVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEA 298
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG QIRNYVFHPY++VKD+RT ET+++ SV+DG L+PFI L+ S
Sbjct: 299 AWGNQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLDPFIHELLRMNIS 348
>gi|126695538|ref|YP_001090424.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9301]
gi|126542581|gb|ABO16823.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9301]
Length = 354
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/350 (54%), Positives = 257/350 (73%), Gaps = 3/350 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A FW+N+ EA++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPEFWENQEEAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L + LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESKQGL-KKLRENLDKWEFERLLCGEYDKEGAVVSINAGAGG 119
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDW ++LLRMY RW + + + E S GEEAGIKS E++G+YAYGYL EKGT
Sbjct: 120 TDAQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQHEKGT 179
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPFNA G RQTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKV
Sbjct: 180 HRLVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKV 238
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+E+ I+GD V+A
Sbjct: 239 ETAVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEVADIKGDIVEA 298
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG QIRNYVFHPY++VKD+RT ET+++ SV+DG LEPFI L+ S
Sbjct: 299 AWGNQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRMNIS 348
>gi|194476812|ref|YP_002048991.1| peptide chain release factor 2 [Paulinella chromatophora]
gi|171191819|gb|ACB42781.1| peptide chain release factor 2 [Paulinella chromatophora]
Length = 354
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 188/331 (56%), Positives = 244/331 (73%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+LE A+ FWD + +AQ+ ++ L +V++++ L ++ + DA ++L D
Sbjct: 17 DLEQLASQPKFWDLQDQAQKQMRQLDEVREQLEKLRQWQGTIADAKATLELYN--IEPDE 74
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+L E ++ L LD++EL +LL+G YDK GAVISI AGAGGTDAQDWA MLLRMY
Sbjct: 75 SMLNEGNEGMQRLKNNLDRWELERLLNGTYDKGGAVISINAGAGGTDAQDWARMLLRMYT 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E K + E S GEEAGIKS E++G YAYGYL EKGTHR+VR SPFNA R
Sbjct: 135 RWSEDHGMKVNICEISEGEEAGIKSVTFEIDGSYAYGYLRNEKGTHRLVRISPFNANDKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L E+ +D+ IP++DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ V
Sbjct: 195 QTSFAGVEVMPKLNED-IDMFIPDKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA++ LKAKL+VIA+EQRA+EI IRG+ V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMALLKAKLMVIAQEQRAAEIADIRGEIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+VKD+RT ET+D+ VMDG+L+ FI++ L+
Sbjct: 314 MVKDLRTNKETTDVQGVMDGDLDLFIQALLR 344
>gi|78778568|ref|YP_396680.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9312]
gi|78712067|gb|ABB49244.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
marinus str. MIT 9312]
Length = 354
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/350 (54%), Positives = 255/350 (72%), Gaps = 3/350 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + +L+ + ELE +A FW+N+ A++ + L DVK ++ LL +KT + DA
Sbjct: 2 LRIVFDVPRLKAKRRELEQISAQPEFWENQEAAKKQMLILDDVKAQLELLDKWKTFISDA 61
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
++L ++ + +LE + K+L LD++E +LL G YDKEGAV+SI AGAGG
Sbjct: 62 NASLELYS-LEPEEEMILESQQGL-KKLRDNLDKWEFERLLCGEYDKEGAVVSIKAGAGG 119
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
TDAQDW ++LLRMY RW + + + E S GEEAGIKS E++G+YAYGYL EKGT
Sbjct: 120 TDAQDWVEILLRMYSRWADNNQMSLIINELSQGEEAGIKSVTFEIDGKYAYGYLQYEKGT 179
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPFNA G RQTSF+G EVMP L ++++ + IPE+DLEI+ SR+GG GGQNVNKV
Sbjct: 180 HRLVRISPFNANGKRQTSFAGVEVMPKL-DDNISLDIPEKDLEITTSRSGGAGGQNVNKV 238
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
ETAVRI H+P+G++VRCT+ERSQL NK KA+ LK+KLLVIA+EQRA+EI I+GD V+A
Sbjct: 239 ETAVRIVHLPSGISVRCTQERSQLQNKEKAMLLLKSKLLVIAKEQRAAEIADIKGDIVEA 298
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG QIRNYVFHPY++VKD+RT ET+++ SV+DG LEPFI L+ S
Sbjct: 299 AWGNQIRNYVFHPYQMVKDLRTMQETNELDSVLDGGLEPFIHELLRMNIS 348
>gi|113475767|ref|YP_721828.1| peptide chain release factor 2 [Trichodesmium erythraeum IMS101]
gi|110166815|gb|ABG51355.1| bacterial peptide chain release factor 2 (bRF-2) [Trichodesmium
erythraeum IMS101]
Length = 288
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/284 (66%), Positives = 232/284 (81%), Gaps = 1/284 (0%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
TD LL EA I LN+ LDQ+EL QLLSG YD+ GAV++I AGAGGTDAQDWA+MLLR
Sbjct: 5 TDESLLAEANLTIANLNQELDQWELQQLLSGLYDQNGAVVTINAGAGGTDAQDWAEMLLR 64
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RWGE+ +YK ++ E S G+EAG+KSA +E+ GRYAYGYL EKGTHR+VR SPFNA
Sbjct: 65 MYTRWGEEHKYKVQLAEISEGDEAGLKSATLEIIGRYAYGYLKAEKGTHRLVRISPFNAN 124
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G EVMP+L + S+++ IPE+DLEI+ SR+GGKGGQNVNKVETAVR+ HIPTG
Sbjct: 125 GKRQTSFAGVEVMPIL-DHSVELDIPEKDLEITTSRSGGKGGQNVNKVETAVRVVHIPTG 183
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
++VRCT+ERSQL NK KAL+ LKA+LL+IA+EQRA EI +IRGD V+A WG QIRNYVFH
Sbjct: 184 LSVRCTQERSQLQNKDKALALLKARLLIIAQEQRAQEINEIRGDMVEAAWGNQIRNYVFH 243
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
PY++VKD+RT ET+ I VM+GEL+ FI++YL+ + M S S
Sbjct: 244 PYQMVKDLRTQKETTAINDVMNGELDQFIEAYLRQENQMVESQS 287
>gi|300868546|ref|ZP_07113164.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
gi|300333459|emb|CBN58356.1| peptide chain release factor 2 [Oscillatoria sp. PCC 6506]
Length = 291
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/284 (67%), Positives = 233/284 (82%), Gaps = 1/284 (0%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
TD LL+EA + + +L++ LDQ+EL QLLSGPYD GAV++I AGAGGTDAQDWA+MLLR
Sbjct: 8 TDESLLQEAYTNLSQLSRELDQWELQQLLSGPYDAGGAVLTINAGAGGTDAQDWAEMLLR 67
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RWGE+Q YK + E S G+EAG+KSA +E+ GRYAYGYL EKGTHR+VR SPFNA
Sbjct: 68 MYTRWGERQGYKVHLAEISEGDEAGLKSATLEIVGRYAYGYLRSEKGTHRLVRISPFNAN 127
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
RQTSF+G EVMP+L + S+++ IPE+DLE++ SRAGGKGGQNVNKVETAVRI H+PTG
Sbjct: 128 DKRQTSFAGVEVMPIL-DRSVELDIPEKDLEVTTSRAGGKGGQNVNKVETAVRIVHLPTG 186
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ VRCTEERSQL NK KAL LKAKLLV+A EQRA EI +IRGD V+A WG QIRNYVFH
Sbjct: 187 LAVRCTEERSQLQNKEKALVLLKAKLLVVAREQRAKEIAEIRGDMVEAAWGNQIRNYVFH 246
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
PY++VKD+RTG ET+ I VM+GELEPFI++YL+ + + SA+
Sbjct: 247 PYQMVKDLRTGVETTAIADVMNGELEPFIQAYLRQENQLVESAA 290
>gi|284929451|ref|YP_003421973.1| peptide chain release factor 2 [cyanobacterium UCYN-A]
gi|284809895|gb|ADB95592.1| bacterial peptide chain release factor 2 (bRF-2) [cyanobacterium
UCYN-A]
Length = 344
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/336 (58%), Positives = 251/336 (74%), Gaps = 2/336 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+ + +LE +FWDN AQ+ Q L++ K +++ + K++D I+ L
Sbjct: 4 LQASIKDLENTTIQPNFWDNPETAQKISQELSNFKSQLDQYHQWYNKLEDTKIIMDLL-- 61
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
+ D LLEEA + I +L K LD ++L QLLSG YD +GA+++I G GGTDAQDW++M
Sbjct: 62 ILDNDKSLLEEAQNNITQLKKNLDNWDLQQLLSGTYDIKGAILNINTGVGGTDAQDWSEM 121
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RWGE Q YK +VE S G+EAGIKSA +E EG YA+GYL GEKGTHR+VR SPF
Sbjct: 122 LLRMYRRWGESQGYKVNLVEISEGDEAGIKSATLEFEGCYAFGYLKGEKGTHRLVRISPF 181
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
NA G RQTSF+G EVMP L + V+IP++DLEI+ +R+GGKGGQNVNKVETAVRI H+
Sbjct: 182 NANGKRQTSFTGIEVMPKLEGNDIKVEIPDKDLEITTTRSGGKGGQNVNKVETAVRIVHL 241
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG++VRCT+ERSQL NK KAL LKAKLL+IA+EQRA +I +IRGD V+A WG QIR+Y
Sbjct: 242 PTGISVRCTQERSQLQNKEKALILLKAKLLIIAQEQRAKKIAEIRGDIVEAAWGNQIRSY 301
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
VFHPY++VKD+RT ET++I VMDG+L FI++YL
Sbjct: 302 VFHPYQMVKDLRTNVETTNINDVMDGDLGLFIEAYL 337
>gi|119486315|ref|ZP_01620374.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
gi|119456528|gb|EAW37658.1| Peptide chain release factor 2 [Lyngbya sp. PCC 8106]
Length = 308
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/304 (62%), Positives = 238/304 (78%), Gaps = 3/304 (0%)
Query: 73 FKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVI 132
++ ++D IV+L E +D LL EA S + LN LD++EL QLLS PYDK GAV+
Sbjct: 7 WQKTIEDTDAIVELLEL--ESDESLLAEAESNLTRLNHDLDRWELQQLLSAPYDKNGAVL 64
Query: 133 SITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYG 192
+I AGAGGTDAQDWA+MLLRMY RWGE YK + E S G+EAGIKS +E+EGRYAYG
Sbjct: 65 TINAGAGGTDAQDWAEMLLRMYTRWGEAHGYKVYLAELSEGDEAGIKSVTLEIEGRYAYG 124
Query: 193 YLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGK 252
YL EKGTHR+VR SPFNA G RQTSF+G E+MP++ ++ + ++IPE+DLE++ SRAGGK
Sbjct: 125 YLKCEKGTHRLVRISPFNANGKRQTSFAGVEIMPMI-DQGVHLEIPEKDLEVTTSRAGGK 183
Query: 253 GGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQ 312
GGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQRA EI +
Sbjct: 184 GGQNVNKVETAVRIVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQRAQEIAE 243
Query: 313 IRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
IRGD V+A WG QIRNYVFHPY++VKD+RT ET+ I VM+GEL+ FI++YL+ + +
Sbjct: 244 IRGDLVEAAWGNQIRNYVFHPYQMVKDLRTSEETTAIDDVMNGELDRFIQAYLRQENQLV 303
Query: 373 LSAS 376
S S
Sbjct: 304 TSES 307
>gi|124024969|ref|YP_001014085.1| peptide chain release factor 2 [Prochlorococcus marinus str.
NATL1A]
gi|123960037|gb|ABM74820.1| peptide chain release factor RF-2 [Prochlorococcus marinus str.
NATL1A]
Length = 313
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 241/310 (77%), Gaps = 3/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
++ L +VK ++ L ++ ++DA ++L E +D D +L EA + +++L + LD++E
Sbjct: 1 MRQLDEVKAQLEKLITWRGAIEDANLSLELYE-LD-LDEEILSEAHNGLEKLKQELDRWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
+LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY RW + K + E S GEEA
Sbjct: 59 TERLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWADNNGMKVIINELSEGEEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKS IE+EG YAYG+L EKGTHR+VR SPFNA G RQTSF+G EVMP L EE ++++
Sbjct: 119 GIKSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEE-VELE 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
IPE+DLEI+ SR+GG GGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LK+
Sbjct: 178 IPEKDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKS 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
KL+VIA EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ SVM+GE
Sbjct: 238 KLMVIALEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGE 297
Query: 357 LEPFIKSYLK 366
++ FI+S L+
Sbjct: 298 IDIFIQSLLR 307
>gi|72383384|ref|YP_292739.1| peptide chain release factor 2 [Prochlorococcus marinus str.
NATL2A]
gi|72003234|gb|AAZ59036.1| bacterial peptide chain release factor 2 (bRF-2) [Prochlorococcus
marinus str. NATL2A]
Length = 313
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/310 (60%), Positives = 241/310 (77%), Gaps = 3/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
++ L +VK ++ L ++ ++DA V+L E +D D +L EA + +++L + L+++E
Sbjct: 1 MRQLDEVKAELEKLITWRGAIEDANLSVELYE-LDP-DEEILSEAHNGLEQLKQELERWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
+LLSG YDKEGAV+SI AGAGGTDAQDWA MLLRMY RW E K + E S GEEA
Sbjct: 59 TERLLSGIYDKEGAVLSINAGAGGTDAQDWAQMLLRMYTRWAENNGMKVSINELSEGEEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKS IE+EG YAYG+L EKGTHR+VR SPFNA G RQTSF+G EVMP L EE ++++
Sbjct: 119 GIKSVTIEIEGVYAYGFLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKLDEE-VELE 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
IPE+DLEI+ SR+GG GGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KA++ LK+
Sbjct: 178 IPEKDLEITTSRSGGAGGQNVNKVETAVRILHVPTGIAVRCTQERSQLQNKDKAMALLKS 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
KL+VIA EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ SVM+G+
Sbjct: 238 KLMVIAVEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTEQETTDVDSVMNGK 297
Query: 357 LEPFIKSYLK 366
++ FI+S L+
Sbjct: 298 IDIFIQSLLR 307
>gi|443475640|ref|ZP_21065582.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudanabaena
biceps PCC 7429]
gi|443019475|gb|ELS33558.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudanabaena
biceps PCC 7429]
Length = 368
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/334 (57%), Positives = 249/334 (74%), Gaps = 3/334 (0%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
++++LE AA FW+N +AQ+T++ L +K + ++ +++ I +L D
Sbjct: 32 KISDLEQTAAQPEFWENSDQAQKTMRELDALKSYLEKFASWRQTIENLEAIAELLALEDD 91
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
EA + +L + +++++L QLLSG YDK AV++I AGAGGTD+QDW +MLLR
Sbjct: 92 LAL--ANEAKQSLTQLLQEMERWDLEQLLSGTYDKYDAVLTINAGAGGTDSQDWTEMLLR 149
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY R+ E Q YK + E S GEEAGIKS + V GRYAYGYL+ EKGTHR+VR SPFNA
Sbjct: 150 MYTRFCESQGYKVEISEISEGEEAGIKSVTLLVHGRYAYGYLAPEKGTHRLVRISPFNAN 209
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
RQTSF+G EVMPLL EE +D+ I ++LEI+ +RAGGKGGQNVNKVETAVRITH+PTG
Sbjct: 210 DKRQTSFAGVEVMPLL-EEDVDLDIDPKELEITTTRAGGKGGQNVNKVETAVRITHLPTG 268
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
++VRCT+ERSQL NK A+ LKAKLL+IA+EQRA +I IRGD V+A WG QIRNYVFH
Sbjct: 269 ISVRCTQERSQLQNKENAMRLLKAKLLIIAQEQRAQKIADIRGDMVEAAWGNQIRNYVFH 328
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
PY+LVKD+RTG ET++I +VMDG+LEPFI+SYL+
Sbjct: 329 PYQLVKDLRTGEETTNIQNVMDGDLEPFIQSYLR 362
>gi|255074407|ref|XP_002500878.1| predicted protein [Micromonas sp. RCC299]
gi|226516141|gb|ACO62136.1| predicted protein [Micromonas sp. RCC299]
Length = 428
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/378 (49%), Positives = 255/378 (67%), Gaps = 16/378 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR+ A RV++ +++L +A+L+ A++ + WD+ +A+ + L D K++
Sbjct: 36 LRRRANALETRVKDALDVVDVERLAATVADLDAAASEGTLWDDPIKAKAVMAELADAKEQ 95
Query: 67 I-------NLLTDFKTKM--------DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKA 111
+ NLL D + DD+++ + D +L E + L +
Sbjct: 96 LATARGFENLLGDAAVALEMIDAEREDDSLSGAAANDASAGPDPTILAELSDACDNLERQ 155
Query: 112 LDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS 171
LD++E+ +LL G YD A++++ AGAGGTDAQDWA+ML RMY W + + R VE+S
Sbjct: 156 LDKWEVRRLLGGKYDAMPALVNVYAGAGGTDAQDWAEMLERMYRGWCNSRGFTWRTVERS 215
Query: 172 LGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEE 231
GEEAG+KS EV+GR+AYGYL E+GTHR+VRQSPF RQTSF+ EV P+L E
Sbjct: 216 EGEEAGLKSVTFEVQGRFAYGYLRSERGTHRLVRQSPFKKDATRQTSFAAVEVTPVLDEG 275
Query: 232 SMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKA 290
S++ + + + DLEIS R+GG GGQNVNKVETAVRI H+PTG+TVRC EERSQ ANK K
Sbjct: 276 SVEELTLRDSDLEISTMRSGGAGGQNVNKVETAVRIKHVPTGITVRCEEERSQAANKAKG 335
Query: 291 LSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIV 350
L+RLKAKL+ +AEEQRA+++ IRGDAV+AEWGQQIRNYVFHPYK+VKDVRTG ETSD+
Sbjct: 336 LARLKAKLVAVAEEQRAADVAAIRGDAVRAEWGQQIRNYVFHPYKMVKDVRTGKETSDVD 395
Query: 351 SVMDGELEPFIKSYLKYK 368
VM G+L+ F+ +L++K
Sbjct: 396 GVMSGDLDEFMDEFLRWK 413
>gi|332707784|ref|ZP_08427811.1| bacterial peptide chain release factor 2 [Moorea producens 3L]
gi|332353487|gb|EGJ33000.1| bacterial peptide chain release factor 2 [Moorea producens 3L]
Length = 294
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 233/296 (78%), Gaps = 3/296 (1%)
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
M+D I++L E TD LL EA + + +LNK LD++EL QLLSG YD +GAV++I A
Sbjct: 1 MEDTKAILELLEL--ETDDALLAEAQTNLTQLNKELDRWELEQLLSGTYDAKGAVLTINA 58
Query: 137 GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSG 196
GAGGTDAQDWAD+LLRMY RW E YK + E S G+EAGIKSA +E++G AYGYL
Sbjct: 59 GAGGTDAQDWADLLLRMYTRWAENHGYKVHLAELSPGDEAGIKSATLEIDGLRAYGYLKA 118
Query: 197 EKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQN 256
EKGTHR+VR SPFNA G RQTSF+G EVMP + + +++++IPE+DLEI+ SRAGGKGGQN
Sbjct: 119 EKGTHRLVRISPFNANGKRQTSFAGVEVMPAV-DNTVELEIPEKDLEITTSRAGGKGGQN 177
Query: 257 VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 316
VNKVETAVRI HIPTG+ VRCT+ERSQL NK KAL LKAKLLVIAEEQRA EI +IRGD
Sbjct: 178 VNKVETAVRIVHIPTGLAVRCTQERSQLQNKEKALVLLKAKLLVIAEEQRAQEIAEIRGD 237
Query: 317 AVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
V+A WG QIRNYVFHPY++VKD+RT ET+ + V+DG L+ FI++YL+ + ++
Sbjct: 238 MVEAAWGNQIRNYVFHPYQMVKDLRTSVETTAVNDVLDGNLDLFIEAYLRQENQLT 293
>gi|124024426|ref|YP_001018733.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9303]
gi|123964712|gb|ABM79468.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9303]
Length = 319
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/310 (60%), Positives = 243/310 (78%), Gaps = 3/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
++ L +VK ++ + +++ ++DA ++L + D +L EA S +++L + LD++E
Sbjct: 1 MRQLDEVKAQLVQIKLWRSAVNDAQATLELYDL--EPDDEMLSEAQSGLQQLRQGLDRWE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
L +LLSG YDK+GAV+SI AGAGGTDAQDWA MLLRMY RW E + V E S GEEA
Sbjct: 59 LERLLSGEYDKKGAVLSINAGAGGTDAQDWAQMLLRMYTRWAEDHDMRVTVDELSEGEEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKSA +E+EGRYAYGYL EKGTHR+VR SPFNA G RQTSF+G E+MP + +E +++
Sbjct: 119 GIKSATVEIEGRYAYGYLRNEKGTHRLVRISPFNANGKRQTSFAGVEIMPKIDQE-VELD 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
IPE+DLE++ SR+GG GGQNVNKVETAVRI HIPTG+ VRCT+ERSQL NK KAL+ LKA
Sbjct: 178 IPEKDLEVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKALALLKA 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
KL+VIA+EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +VM+GE
Sbjct: 238 KLMVIAQEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTAEETTDVQAVMNGE 297
Query: 357 LEPFIKSYLK 366
L+ FI++ L+
Sbjct: 298 LDRFIQTLLR 307
>gi|254411738|ref|ZP_05025514.1| peptide chain release factor 2 [Coleofasciculus chthonoplastes PCC
7420]
gi|196181460|gb|EDX76448.1| peptide chain release factor 2 [Coleofasciculus chthonoplastes PCC
7420]
Length = 305
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 224/274 (81%), Gaps = 1/274 (0%)
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
+EA + + +LN+ LD++EL QLLSGPYD GAV++I AGAGGTDAQDWA+MLLRMY RW
Sbjct: 33 QEAQTNVVKLNRELDRWELEQLLSGPYDANGAVLAINAGAGGTDAQDWAEMLLRMYTRWA 92
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E Q YK ++ E S G+EAGIKSA +E++G AYGYL EKGTHR+VR SP+NA G RQTS
Sbjct: 93 ENQGYKVQLAEFSEGDEAGIKSATLEIQGLRAYGYLKAEKGTHRLVRISPYNANGKRQTS 152
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+G EVMP+L E+ +D+ IPE DLEI+ SR+GGKGGQNVNKVETAVR+ HIPT + VRCT
Sbjct: 153 FAGVEVMPILNED-VDLDIPETDLEITTSRSGGKGGQNVNKVETAVRVKHIPTDIAVRCT 211
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
+ERSQL NK KAL+ LKAKLLVIA+EQRA EI +IRGD V+A WG QIRNYVFHPY+LVK
Sbjct: 212 QERSQLQNKEKALALLKAKLLVIAQEQRAQEIAEIRGDMVEAAWGNQIRNYVFHPYQLVK 271
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
D+RT ET+ + V++G L+PFI++YL+ + ++
Sbjct: 272 DLRTNVETTGVDDVLNGTLDPFIEAYLRQENQLT 305
>gi|33860740|ref|NP_892301.1| peptide chain release factor 2 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633682|emb|CAE18639.1| peptide chain release factor RF-2 [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 373
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 191/370 (51%), Positives = 257/370 (69%), Gaps = 3/370 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +KD+ + R+ + + L + ELE AA FW N+A+A++ + L
Sbjct: 1 MIDITEFKKDLSELTKRLGNAQDCLDVPNLVAKKKELEQIAAQPEFWGNQADAKKHMLNL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
DV+D++ LL +K + DA ++L ++ + ++E ++ L + LD++E +L
Sbjct: 61 DDVRDQLQLLDKWKMFISDAEASLELYS-LEPEEEMIVESHQGLVT-LRENLDKWEFQRL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L G YDKE A++SI AGAGGTDAQDW ++LLRMY RW + + + S GEEAGIKS
Sbjct: 119 LCGEYDKEAAIVSINAGAGGTDAQDWVEILLRMYSRWVDNNGMSLEITDLSDGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
EV G+YAYGYL EKGTHR+VR SPFNA G RQTSF+G EVMP L ++S+ + IP++
Sbjct: 179 VTFEVNGKYAYGYLQNEKGTHRLVRISPFNANGKRQTSFAGVEVMPKL-DQSISLDIPDK 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DLEI+ SR+GG GGQNVNKVETAVRI H+P+G+ VRCT+ERSQL NK KA+ LKAKLLV
Sbjct: 238 DLEITTSRSGGAGGQNVNKVETAVRIVHLPSGIAVRCTQERSQLQNKEKAMLLLKAKLLV 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IA+EQRASEI I+GD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +V++G L+ F
Sbjct: 298 IAKEQRASEISDIKGDIVEAAWGNQIRNYVFHPYQMVKDLRTMKETNDLDAVLNGGLDQF 357
Query: 361 IKSYLKYKYS 370
I L+ S
Sbjct: 358 IHELLRMNIS 367
>gi|298706071|emb|CBJ29181.1| peptide chain release factor [Ectocarpus siliculosus]
Length = 789
Score = 360 bits (925), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 181/369 (49%), Positives = 264/369 (71%), Gaps = 4/369 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D ++R+ + +A +R+ + R +LE EL LE ++++ FW++ A++TL L
Sbjct: 86 DVGDVRRGLSSARERLGKNRQLFDEAKLEGELEYLEGVSSEAEFWNDANSARKTLGDLNR 145
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDST---DAGLLEEAASIIKELNKALDQFELTQ 119
+K +++ L ++ DA T+++L E + +L+EA ++ L + LD +EL Q
Sbjct: 146 LKLQLDRLHRWRGWEADAETVIELCGEEEGGDEETVAMLDEAMEALQLLQRDLDAWELQQ 205
Query: 120 LLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIK 179
LLSG YD G ++I AGAGGT+AQDWA+ML RMY+R+ +++ +K ++VE+ GE AGIK
Sbjct: 206 LLSGKYDNCGCRLTIMAGAGGTEAQDWAEMLQRMYIRFFQRRGFKYKMVEEESGEVAGIK 265
Query: 180 SAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESM-DVQIP 238
S ++VEG +AYGYL+GEKGTHR+VRQSPFNA+ RQTSF+G E P++ ++ + D+ +P
Sbjct: 266 SCEMQVEGDFAYGYLAGEKGTHRLVRQSPFNAQAKRQTSFAGVESFPIIEQDDLSDLVVP 325
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
E +LE+S R+GG GGQNVNKVET VR+ HIPTG+ VRCT+ERSQ+ NK AL+ LK KL
Sbjct: 326 EGELEVSTMRSGGSGGQNVNKVETGVRMKHIPTGIAVRCTQERSQMLNKELALNMLKEKL 385
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
+V+ +EQ+ ++ +IRGD V+A WGQQIRNYVFHPYKLVKD RTG ET + VMDG+L+
Sbjct: 386 VVVMQEQQTRDLAEIRGDMVEASWGQQIRNYVFHPYKLVKDTRTGAETVQVQDVMDGDLD 445
Query: 359 PFIKSYLKY 367
I++YL++
Sbjct: 446 ALIEAYLRH 454
>gi|123965444|ref|YP_001010525.1| peptide chain release factor 2 [Prochlorococcus marinus str. MIT
9515]
gi|123199810|gb|ABM71418.1| peptide chain release factor RF-2 [Prochlorococcus marinus str. MIT
9515]
Length = 354
Score = 358 bits (918), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 245/335 (73%), Gaps = 3/335 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
ELE AA+ FW N+A A++ + L DV+D++ LL +K + DA ++L +D +
Sbjct: 17 ELEQIAAEPDFWINQAAAKKHMLNLDDVRDQLQLLDKWKILIADAEASLELYS-LDPEEE 75
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
++E ++ L + LD++E +LLSG YDKE A++SI AGAGGTDAQDW ++LLRMY
Sbjct: 76 MIVESHLGLVT-LRENLDKWEFQRLLSGEYDKESAIVSINAGAGGTDAQDWVEILLRMYS 134
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW + + + S GEEAGIKS EV G+YAYGYL EKGTHR+VR SPFNA G R
Sbjct: 135 RWADNNGMSLEITDLSNGEEAGIKSVTFEVNGKYAYGYLQNEKGTHRLVRISPFNANGKR 194
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+G EVMP L ++S+ ++IP++DLEI+ SR+GG GGQNVNKVETAVRI H+P+G+ V
Sbjct: 195 QTSFAGVEVMPKL-DQSISLEIPDKDLEITTSRSGGAGGQNVNKVETAVRILHLPSGIAV 253
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
RCT+ERSQL NK KA+ LKAKLLVIA+EQRA+EI I+GD V+A WG QIRNYVFHPY+
Sbjct: 254 RCTQERSQLQNKEKAMLLLKAKLLVIAKEQRAAEISDIKGDIVEAAWGNQIRNYVFHPYQ 313
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+VKD+RT ET+D+ V++G L+ FI L+ S
Sbjct: 314 MVKDLRTMKETNDLDGVLNGGLDQFIHELLRMNIS 348
>gi|308804958|ref|XP_003079791.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
gi|116058248|emb|CAL53437.1| putative translation releasing factor2 (ISS) [Ostreococcus tauri]
Length = 419
Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 248/348 (71%), Gaps = 3/348 (0%)
Query: 25 AGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIV 84
A ++ L+ L+ +++ W++ +A+ + L V+++++ F+ + DA T +
Sbjct: 68 ADVKGLKMRFESLDERSSAGDLWEDANKARVVMAELAGVREELDAARAFEEHVSDAKTAL 127
Query: 85 KLTE--EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTD 142
+L E E D+ + +L EA + ++ L++AL+Q+EL +LL G YD GAV+ I AGAGG D
Sbjct: 128 ELAEVGESDNEMSEMLCEAMASVEALDEALEQWELRRLLGGKYDALGAVVQIYAGAGGLD 187
Query: 143 AQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHR 202
AQDW +ML RMY+ W EK+ Y RV E+ GE G+K+A +EV+GR+AYGYLS EKGTHR
Sbjct: 188 AQDWTEMLERMYIGWCEKRGYGVRVTERQEGEGGGLKTATLEVDGRHAYGYLSSEKGTHR 247
Query: 203 IVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 262
+VRQSPFN RQTSF+ +V+PLL +E +V++PE DLEI+ R+ G GGQNVNK+ET
Sbjct: 248 LVRQSPFNKDAARQTSFAAVDVIPLLQDED-EVKVPEGDLEITTMRSSGAGGQNVNKLET 306
Query: 263 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 322
AVRI H+PTG++V+ E R+Q N+ A+ R+KAKL +AEE R ++I ++RGD VKAEW
Sbjct: 307 AVRIKHVPTGISVKAEEHRTQALNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEW 366
Query: 323 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
GQQIRNYV HPYK+VKDVRTG ETSD+ V++G L+ ++ YL++K S
Sbjct: 367 GQQIRNYVLHPYKMVKDVRTGVETSDVTRVLNGGLDEYMNGYLRWKAS 414
>gi|452821121|gb|EME28155.1| peptide chain release factor RF-2 [Galdieria sulphuraria]
Length = 419
Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 176/366 (48%), Positives = 257/366 (70%), Gaps = 1/366 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+++++ +RV+++ S + +L KE+ L+++ D+SFW+N+ +A++ L+ L+ +
Sbjct: 47 DIQREFSYLRERVDDVFKSIAMDRLRKEIELLQLETNDASFWENKTQAEKVLKDLSSKRY 106
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ + ++ ++ D ++L D+ LLEEA I +L K L+++E L SG Y
Sbjct: 107 KLEKFSSWEQRLQDLQAYLQLQSTEGEPDSSLLEEATQHIVQLKKELNRWETQHLFSGRY 166
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++ITAGAGGTDAQDWA +LLRMY RW E+Q + VV+ + GEEAG+KSA +++
Sbjct: 167 DVNAAMLTITAGAGGTDAQDWASLLLRMYTRWCERQDFSFTVVDIADGEEAGVKSAYLQI 226
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ-IPEEDLEI 244
+ YAYGYL GEKG HR+VR SPFNA RQTSF+G +V+PLL EE ++ IP EDL +
Sbjct: 227 QNEYAYGYLQGEKGAHRLVRLSPFNANNKRQTSFAGVDVIPLLQEEELETLIIPPEDLVV 286
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RAGGKGGQNVNKVETAVRI HIP+G+ VR +ERSQ NK A+ L++KLL++ +E
Sbjct: 287 TTMRAGGKGGQNVNKVETAVRIHHIPSGIQVRSAKERSQYQNKQIAMQLLRSKLLLLEKE 346
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ ++RGD V+AEWG QIRNYVFHPYK+VKD+RT E D+ SV+DG+L+ FI ++
Sbjct: 347 RMERVRNEVRGDVVEAEWGNQIRNYVFHPYKVVKDLRTNVEKGDVESVLDGDLDDFIHAF 406
Query: 365 LKYKYS 370
L++ S
Sbjct: 407 LRWNAS 412
>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
Length = 371
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 173/363 (47%), Positives = 246/363 (67%), Gaps = 2/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L++D+ ++R+EE+R S + + + LE K A+ FWDN EAQ+ ++ + D+KD
Sbjct: 4 DLKRDLIELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLKD 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
I L K + DD T+ +L E D D + +E A I+ L ++Q ELT LL Y
Sbjct: 64 TIGLYNTLKRQYDDVYTLWELGMEDDDPDE-IEKEVARDIRHLRHNVEQAELTLLLGDKY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
DK A+IS+ AGAGGT+AQDW MLLRMY RW E++ YK ++ G+EAGIKSA I +
Sbjct: 123 DKGNAIISLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
EG YAYGYL EKG HR+VR SPF+A G R TSF+ +V+P + +E+ ++ I DL I
Sbjct: 183 EGPYAYGYLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEVDDET-EIVIDPADLRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+GG GGQ+VNK ++AVRITHIPTG+ V+C ERSQ +N++KA+ L+A+LL + ++
Sbjct: 242 TFRSGGAGGQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKK 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ E+ ++RG+ + WG QIR+YVFHPY LVKD RTG ET ++ +VMDGE++ FI +YL
Sbjct: 302 KEEELNKLRGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYL 361
Query: 366 KYK 368
K +
Sbjct: 362 KSR 364
>gi|412993319|emb|CCO16852.1| peptide chain release factor 2 [Bathycoccus prasinos]
Length = 423
Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 180/386 (46%), Positives = 248/386 (64%), Gaps = 28/386 (7%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
F +LRK ++A D + + + LEK LE K D FW N+ EA+ + L+ V
Sbjct: 38 FQSLRKRADSAMDILNKTK-------LEKSRELLETKQNDPEFWSNQTEAKRVTKELSFV 90
Query: 64 KDKINLLTDFKTKMDDA----VTIVKLTEEMDSTDAG-------------LLEEAASIIK 106
+ ++ + DD + + ++ D+ + G L EA
Sbjct: 91 QSQLRRAELVEATRDDVELSLEMLEEEQQQQDADNGGNDENKGGNEDYELLRTEAIRSSI 150
Query: 107 ELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTR 166
+LN+ L +FE ++L G YDK G+ + I AGAGGTDAQDWA+ML R Y+ W +K+ +K
Sbjct: 151 KLNEMLSEFETEKMLGGKYDKLGSELFIYAGAGGTDAQDWAEMLERAYLNWAQKRGFKAT 210
Query: 167 VVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF-NAKGLRQTSFSGAEVM 225
+ ++ GEEAGIKS IE+EG YA+G+L EKGTHR+VR SPF RQTSF+ +V
Sbjct: 211 ITSRNKGEEAGIKSVTIEIEGTYAFGFLRSEKGTHRLVRLSPFKKGDSSRQTSFAAVDVC 270
Query: 226 PLL---PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
PL EE+ ++ IPE+DLEI+ R+GG GGQNVNKVETAVRI HIPT +TVRC E+RS
Sbjct: 271 PLFEDESEEAGEMNIPEKDLEITTMRSGGAGGQNVNKVETAVRIRHIPTDITVRCDEDRS 330
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q+ NK KA+ RLKAKL + E+QR ++K+IRGD VKAE+G+QIRNYV HPYK+VKDVR+
Sbjct: 331 QMMNKAKAMVRLKAKLAAVLEQQRLQDVKEIRGDVVKAEFGEQIRNYVLHPYKVVKDVRS 390
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYK 368
G ET+D V++G +PF+K YL+++
Sbjct: 391 GWETADTEGVLNGNFDPFMKEYLRFR 416
>gi|145347488|ref|XP_001418196.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578425|gb|ABO96489.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 278
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 207/274 (75%), Gaps = 3/274 (1%)
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+L EA + ++ L+KALD +EL +LL G YD GAV+ I AGAGG DAQDW +ML RMY+
Sbjct: 1 MLREALTSVEALDKALDAWELRRLLGGKYDAFGAVLQIYAGAGGLDAQDWTEMLERMYLG 60
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
W EK+ + R E+ GE G+K+A +EVEGRYAYGYLS EKGTHR+VRQSPFN RQ
Sbjct: 61 WCEKRGFAVRATERLEGEGGGLKTATLEVEGRYAYGYLSSEKGTHRLVRQSPFNKDAARQ 120
Query: 217 TSFSGAEVMPLLPEESMD--VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 274
TSF+ +V+PL EE M+ V++P+ DLE++ R+GG GGQNVNKVETAVRI HIPTG+T
Sbjct: 121 TSFAAVDVIPLF-EEDMEEVVKVPDTDLEVTTMRSGGAGGQNVNKVETAVRIKHIPTGIT 179
Query: 275 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 334
V+ E R+Q N+ A+ R+KAKL +AEE R ++I ++RGD VKAEWGQQIRNYV HPY
Sbjct: 180 VKAEEHRTQQLNRQAAMLRIKAKLTALAEEARVADIAELRGDIVKAEWGQQIRNYVLHPY 239
Query: 335 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KLVKDVRTG ETSD V++G L+ ++ YL++K
Sbjct: 240 KLVKDVRTGVETSDANKVLNGALDEYMNGYLRWK 273
>gi|414585985|tpg|DAA36556.1| TPA: hypothetical protein ZEAMMB73_481691 [Zea mays]
Length = 983
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 163/200 (81%), Positives = 171/200 (85%), Gaps = 21/200 (10%)
Query: 144 QDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
+DWADMLLRMY AGIKSA +E+EGRYAYGYLSGEKGTHRI
Sbjct: 744 KDWADMLLRMY---------------------AGIKSATVELEGRYAYGYLSGEKGTHRI 782
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VRQSPFNAKGLRQTSF+G EVMPLLPEESM V IPEEDLEISF+RAGGKGGQNVNKVETA
Sbjct: 783 VRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVDIPEEDLEISFTRAGGKGGQNVNKVETA 842
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VR+ HIPTG+ VRC+EERSQLANKIKALSRLKAKLLVIA EQRASEIKQIRGD VKAEWG
Sbjct: 843 VRMVHIPTGIAVRCSEERSQLANKIKALSRLKAKLLVIALEQRASEIKQIRGDIVKAEWG 902
Query: 324 QQIRNYVFHPYKLVKDVRTG 343
QQIRNYVFHPYKLVKDVRTG
Sbjct: 903 QQIRNYVFHPYKLVKDVRTG 922
>gi|449015961|dbj|BAM79363.1| chloroplast peptide chain release factor RF-2 [Cyanidioschyzon
merolae strain 10D]
Length = 526
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/392 (47%), Positives = 239/392 (60%), Gaps = 41/392 (10%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
+ +LR+ V+ R E+ L+ K L ELE W++ EAQ L+AL
Sbjct: 100 HEVSSLRQSVQEQVHRTSEL---LDLEAQRKRLKELERATLSPEMWNDAKEAQRKLRALA 156
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLT----EEMDSTDAG--------------------- 96
K + + + DA ++V+L EE+ A
Sbjct: 157 HQKALVERAERWLRAVADADSVVQLATATIEELQELPATHEPGTTGVQTSATANQDLDDV 216
Query: 97 --LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMY 154
LL + ++ + L FEL +L SG YD+ GA +++ AGAGGTDAQDWA++LLRMY
Sbjct: 217 RVLLHGTLAELERIASDLGSFELERLFSGQYDRFGARVTVQAGAGGTDAQDWAEILLRMY 276
Query: 155 VRWGEKQRYK-----------TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
RW E++ RV + S GE AGIKSAV+EV YAYGYL EKGTHR+
Sbjct: 277 TRWCERKFGNAASESGGTSKVVRVSDLSPGETAGIKSAVLEVNAPYAYGYLRWEKGTHRL 336
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VRQSPFNA RQTSF+G EV+P+L +E ++QIP+ DLEI+ R+GG GGQNVNKVETA
Sbjct: 337 VRQSPFNADAKRQTSFAGVEVLPILEDEEEELQIPDSDLEITTMRSGGSGGQNVNKVETA 396
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VRI HIPTGV+VRC+ ERSQ N+ K + LKAKLLVI EEQR+S ++IRG+AV+A WG
Sbjct: 397 VRIVHIPTGVSVRCSSERSQSQNRTKGMQILKAKLLVIREEQRSSRWEEIRGEAVEAAWG 456
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDG 355
QQIRNYV HPYKLVKD+R G ET ++ +DG
Sbjct: 457 QQIRNYVLHPYKLVKDLRNGWETGNVSDFLDG 488
>gi|332798808|ref|YP_004460307.1| peptide chain release factor 2 [Tepidanaerobacter acetatoxydans
Re1]
gi|332696543|gb|AEE91000.1| peptide chain release factor 2 [Tepidanaerobacter acetatoxydans
Re1]
Length = 365
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 171/359 (47%), Positives = 239/359 (66%), Gaps = 3/359 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R ++EAA + E+R S + +++ E+ +LE K + FW+++ AQ+TLQ L D+K+K
Sbjct: 6 RIEIEAAKPVLTELRDSLEIDKIKFEINQLEQKTFAADFWNDQELAQKTLQRLNDLKEKF 65
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ T + K DD +T+++L E D D L E + +K+ K L++ +L LLSG YD
Sbjct: 66 DNFTLLEKKYDDLLTLIELCTETD--DEELRTELLNEMKDFKKQLEKMKLQTLLSGKYDG 123
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++++ AGAGGT+AQDW MLLRMY RW E + YK +++ G+EAGIKSA + VEG
Sbjct: 124 RNAILTLHAGAGGTEAQDWVSMLLRMYTRWAEDKGYKVSILDMLPGDEAGIKSAAVLVEG 183
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYGYL EKG HR+VR SPF+A G R TSF+ +VMP + ++ PE DL+I
Sbjct: 184 PNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASVDVMPEIDDDIEIDIKPE-DLKIDTF 242
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQ+VNK E+AVRITHIPTG V C ERSQ +N+ A+ L+AKL I +E++
Sbjct: 243 RSGGAGGQHVNKTESAVRITHIPTGTVVSCQNERSQQSNRNTAMKILRAKLFDIYQEEQQ 302
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG + WG QIR+Y+FHPY LVKD RT E ++ +VMDGEL+ FI +YLK
Sbjct: 303 KELDKIRGSQKEIAWGSQIRSYIFHPYSLVKDHRTDVEVGNVQAVMDGELDEFINAYLK 361
>gi|188590075|ref|YP_001919915.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
Alaska E43]
gi|188500356|gb|ACD53492.1| peptide chain release factor 2 [Clostridium botulinum E3 str.
Alaska E43]
Length = 344
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 166/337 (49%), Positives = 223/337 (66%), Gaps = 4/337 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
LEK+L+ELE + + FW++ A+E + +KDKI + ++K+DD I L E
Sbjct: 9 LEKQLSELEFQMQEDGFWNDTKRAEEITKESKRIKDKIQRVESVQSKLDD---IEVLKEM 65
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
MD D E + IKE+ + +D + + LLSG YDK A++++ G GGTDA DW +M
Sbjct: 66 MDDDDEESAYEIINNIKEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEM 125
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ YK V++ G+EAGIKS ++V G YAYGYL EKG HR+VR SPF
Sbjct: 126 LLRMYTRWCEKKNYKVEVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPF 185
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
NA G RQTSF+ EV+P L +E D+ I ED+++ RA G GGQ++NK ++AVRITHI
Sbjct: 186 NANGKRQTSFASMEVLPELTKEQ-DIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHI 244
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTGV V+C ERSQ +NK A+ LKAKL+ + E +I+ + G+ WG QIR+Y
Sbjct: 245 PTGVVVQCQNERSQFSNKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSY 304
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY LVKD RT E S++ +VMDG+L+ FI SYLK
Sbjct: 305 VFHPYNLVKDHRTNVEVSNVTAVMDGDLDLFINSYLK 341
>gi|302390246|ref|YP_003826067.1| peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani
DSM 16646]
gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
[Thermosediminibacter oceani DSM 16646]
Length = 365
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 241/360 (66%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++EA ++E+R + + +L+ E+A+LE K +FWD+ AQ+ LQ L +K+
Sbjct: 5 IRSEIEAFEPHIQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKET 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ K K +D +T+++L ++ D GL E ++ +E K ++ L LL G YD
Sbjct: 65 VEKFEAIKKKWEDLMTLIELG--IEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++S+ AGAGGT+AQDW MLLRMY RW E + YK +V++ GEEAGIKSA I VE
Sbjct: 123 KNNAILSLHAGAGGTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVE 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGYL E+G HR+VR SPF+A G R TSF+ +V+P + E+ ++V+I EDL+I
Sbjct: 183 GPYAYGYLKSEQGVHRLVRISPFDAAGRRHTSFASVDVIPEI-EDDIEVEIKPEDLKIET 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQ VNK E+AVRITHIPTG+ V C ERSQ +N+ A+ L+AKL + E++
Sbjct: 242 FRSGGAGGQYVNKTESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQ 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+I ++RG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 302 QKKINELRGEQKEIAWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLK 361
>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
Length = 362
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/350 (46%), Positives = 231/350 (66%), Gaps = 4/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 15 NNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 75 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLH 131
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G GG+DA DW +MLLRMY RW EK+ Y ++ G+EAG+KS ++V+G +AYGYL
Sbjct: 132 TGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLK 191
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR+VR SPFNA G RQTSF+ EV+P L + D++I DL I RAGG GGQ
Sbjct: 192 AEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQ 250
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVFHPY +VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360
>gi|281185482|sp|Q0TNE1.2|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
perfringens ATCC 13124]
Length = 362
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/350 (46%), Positives = 231/350 (66%), Gaps = 4/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 15 NNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 75 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLH 131
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G GG+DA DW +MLLRMY RW EK+ Y ++ G+EAG+KS ++V+G +AYGYL
Sbjct: 132 TGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLK 191
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR+VR SPFNA G RQTSF+ EV+P L + D++I DL I RAGG GGQ
Sbjct: 192 AEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQ 250
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVFHPY +VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360
>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
Length = 332
Score = 330 bits (846), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 161/330 (48%), Positives = 227/330 (68%), Gaps = 3/330 (0%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FWD+ AEAQ+ Q +T +KD I+ +++ D + +L MD D
Sbjct: 1 MEHKMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLG--MDEGDDS 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E A+ ++ L K L+Q ELT LL+G YD A++++ AGAGGT+AQDWA MLLRMY+R
Sbjct: 59 VYDEVAAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMR 118
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
W EK+ YK +++ GEEAGIKSA I V GR AYGYL EKG HR+VR SPF+A G R
Sbjct: 119 WAEKRGYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRH 178
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ +VMP + +++ ++ I DL+I R+GG GGQ+VNK E+AVRITH+PTG+ V+
Sbjct: 179 TSFAAVDVMPEI-DDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQ 237
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
C ERSQ+ N+ +A+ L+AKL + ++R + ++ GD EWG QIR+YVFHPY L
Sbjct: 238 CQSERSQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNL 297
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VKD RT ET ++ +VMDGE++ FI++YL+
Sbjct: 298 VKDHRTNAETGNVQAVMDGEIDLFIEAYLR 327
>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
gi|6225943|sp|O67695.1|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
Length = 373
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 167/362 (46%), Positives = 243/362 (67%), Gaps = 4/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ VE R+E+++ ++LE EL EL+ K ++ +FW+++ +A++ +Q V++
Sbjct: 6 LKGKVEELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N L + + + D +V++T E D+ +++E IKE+ + L + EL LSG D
Sbjct: 66 LNKLKNLEKSVKDLEELVEITSEEDTETWAMMDEE---IKEVERTLRELELKTYLSGEMD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A ++I AGAGGT+A DWADML RMY RW EK+ Y+ +++ + + AGIKS + V+
Sbjct: 123 AKNAYLTIQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVK 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGYL GE+G HR+VR SPF+A R TSF+ VMP + +E + ++I EDL+I
Sbjct: 183 GPYAYGYLKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQI-DEDIKIEIKPEDLKIET 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ VNK +TAVRITHIPTG+TV C +ERSQ NK KAL LKAKL + ++
Sbjct: 242 FRASGAGGQYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKL 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+ KQ G+ WG QIR+YVFHPYKL+KD+RTG+ET ++ +VMDGE++ FI+SYLK
Sbjct: 302 EEKKKQYEGEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLK 361
Query: 367 YK 368
+K
Sbjct: 362 WK 363
>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
Length = 364
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/350 (46%), Positives = 230/350 (65%), Gaps = 4/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 17 NNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 76
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 77 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLH 133
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G GG+DA DW +MLLRMY RW EK+ Y ++ G+EAG+KS ++V+G +AYGYL
Sbjct: 134 TGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLK 193
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR+VR SPFNA G RQTSF+ EV+P L + D++I DL I RAGG GGQ
Sbjct: 194 AEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQ 252
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVFHPY +VKD RT ETS++ VM G+++ FI +YL
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362
>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
gi|123145940|sp|Q0SR12.1|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 364
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/350 (46%), Positives = 230/350 (65%), Gaps = 4/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 17 NNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 76
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 77 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLH 133
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G GG+DA DW +MLLRMY RW EK+ Y ++ G+EAG+KS ++V+G +AYGYL
Sbjct: 134 TGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLK 193
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR+VR SPFNA G RQTSF+ EV+P L + D++I DL I RAGG GGQ
Sbjct: 194 AEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQ 252
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVFHPY +VKD RT ETS++ VM G+++ FI +YL
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362
>gi|442805591|ref|YP_007373740.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741441|gb|AGC69130.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 339
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/338 (46%), Positives = 227/338 (67%), Gaps = 3/338 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+EKELAEL+ KA + FWD+ +Q+ LQ +++DK++ KT +D +T+V+L
Sbjct: 1 MEKELAELDQKAQEPGFWDDIENSQKILQRSKNLRDKLDGFNKLKTDCEDLLTLVELA-- 58
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
++ D + +E S KE+ ++ +L LL G YDK A+ ++ AGAGGT+A DW M
Sbjct: 59 LEEKDESVFDEVESNFKEIKSRFEKLKLQTLLKGEYDKNDAIFTLHAGAGGTEAMDWVQM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW E Y+TR+++ GEEAGIKS +EV+G AYG+L EKG HR+VR SPF
Sbjct: 119 LLRMYTRWAENNNYETRILDLLEGEEAGIKSVTVEVKGENAYGFLKSEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+A G R TSF+ EV+P++ +S ++ I ED+++ RA G GGQ+VNK +AVR+THI
Sbjct: 179 DASGRRHTSFASMEVLPVM-NDSDEIHIDPEDIKMDVFRASGAGGQHVNKTSSAVRLTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C ERSQ N+ A+ L AKLL + E ++ +I +++G+ + WG QIR+Y
Sbjct: 238 PTGIVVTCQNERSQHQNRETAMKMLYAKLLELKEREKQQKINELKGEQMDIAWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+F PY LVKD RTG+E +++ VMDGE++ FI +YLK+
Sbjct: 298 IFCPYTLVKDHRTGYEEANVQKVMDGEIDEFISAYLKW 335
>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
771]
gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
acetoxidans DSM 771]
Length = 366
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 242/365 (66%), Gaps = 3/365 (0%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ ++K +E S RV ++R S + E E+ +L+ FWD++A+AQ+ + +
Sbjct: 2 YTEIKKTLEELSGRVADLRVSLDIAGKESEIEKLDKLMMAPGFWDDQAQAQKISRQQAVL 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KD ++L + + ++D + +L +E D A L E A +K+L + + EL LLSG
Sbjct: 62 KDSVSLYGELRQSLEDLEVLAELAQEEDDDIA--LRETAKDLKQLELRVSELELDVLLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD+ A+IS+ AGAGGT+AQDW +MLLRM+ RW E RY+ V++ G+EAGIKS +
Sbjct: 120 EYDRGNAIISLHAGAGGTEAQDWVEMLLRMFTRWAEDHRYRVIVLDMLSGDEAGIKSVTV 179
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
E+ G A+GYL EKG HR+VR SPF+ G R TSF+ EV+P + +E +D++I EDL+
Sbjct: 180 EIVGPNAFGYLKSEKGVHRLVRISPFDTAGRRHTSFASVEVLPEV-DEDVDIEIKTEDLK 238
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I RAGG GGQ+VNK ++AVRITH+PTG+ V C ERSQL+N+ A+ LKAKL +
Sbjct: 239 IDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQLSNRNSAMKLLKAKLAELEL 298
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+++ +E+ +RGD + WG QIR+YVFHPY LVKD RTG ET +I +VM+GEL+ F+ +
Sbjct: 299 QKKEAEMASLRGDHQEIAWGSQIRSYVFHPYSLVKDHRTGAETGNIEAVMNGELDKFMAA 358
Query: 364 YLKYK 368
+L ++
Sbjct: 359 FLLWQ 363
>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 383
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 160/365 (43%), Positives = 235/365 (64%), Gaps = 2/365 (0%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ LR+++++ + R+ + S + E +A LE A FWD+ AQ+ + + V
Sbjct: 5 YGELRQELKSMATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMNGV 64
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
K ++ + ++ + DA ++L +E D D L EA + ++L +D+FEL +LSG
Sbjct: 65 KSVVDTMRRLESLLQDAEVALQLAQEEDDHD--LFAEANRLAEQLKSEMDEFELQLMLSG 122
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YDK A++ + GAGGT++QDWA MLLRMY RW E YK V++ GEEAGIKS +
Sbjct: 123 EYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTL 182
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
V+G AYGYL EKG HR+VR SPF+A G R TSF+ +V+P + E+ ++I E+L
Sbjct: 183 LVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELR 242
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I R+ G GGQ+VN ++AVRITHIPTG+ V C ERSQ+ N+ +A+ LK++L
Sbjct: 243 IDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRR 302
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
E+R E+ Q+RG+ + WG QIR+YVFHPY LVKD RT +ETS+ +VMDGE++PFI +
Sbjct: 303 EEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHA 362
Query: 364 YLKYK 368
YL+++
Sbjct: 363 YLRWQ 367
>gi|333924707|ref|YP_004498287.1| peptide chain release factor 2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750268|gb|AEF95375.1| Peptide chain release factor 2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 375
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 237/370 (64%), Gaps = 3/370 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E R+E++R S + ++E+ +LE + FWDN +Q+ Q L +KDK
Sbjct: 9 VRRELELLGKRIEDLRVSLDIANQQQEIEKLEHEMTQEGFWDNTEHSQQVTQKLALLKDK 68
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ ++ D +++L E D L +E S + L K + EL +LSGPYD
Sbjct: 69 VEAFNSLESAYQDLEVMLELCNE--EEDPLLDDELKSDLASLTKRVADMELEVMLSGPYD 126
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A++S+ AGAGGT++QDW MLLRM+ R+ E YK V++ G+EAG+KSA I+V
Sbjct: 127 RNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHNYKVEVLDLLPGDEAGVKSATIQVS 186
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF+A G R TSF+ +V+P++ +E ++V I EDL+I
Sbjct: 187 GPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASVDVLPVVDDE-VEVNIRPEDLKIDT 245
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ N+ A+ LKAKL+ + ++
Sbjct: 246 YRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTYNRAAAMKLLKAKLIDLELRKK 305
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +RGD WG QIR+YVFHPY LVKD RTG E ++ +VMDG ++ FI +YL+
Sbjct: 306 EEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTGVEVGNVYAVMDGAIDEFIAAYLR 365
Query: 367 YKYSMSLSAS 376
+K S + +S
Sbjct: 366 HKASSQVGSS 375
>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
Length = 368
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/364 (44%), Positives = 240/364 (65%), Gaps = 4/364 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ +K++E+ R+ ++R S + Q E +++ LE++ FWDN AQ+ +Q L+
Sbjct: 2 IFEWKKELESLEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQ 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
++K+ + ++DD +T+ ++ EE D + LEE I L + LD EL LLS
Sbjct: 62 QEKVKTYYTLQQQLDDMLTLYQMAVEEKDESLEPELEEG---ILALQQRLDGLELEILLS 118
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
GPYD+ A++++ AGAGGT+AQDW ML RMY+R+GE+ YK ++ G+EAGIKSA
Sbjct: 119 GPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKSAT 178
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ G A+GYL EKG HR+VR SPF+A G R TSF+ +V+P + E++ ++QIP EDL
Sbjct: 179 LSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPEDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ RA G GGQ+VNK +AVRITH+PTG+ V+ ERSQ+ N+ L L+AKLL +
Sbjct: 239 KVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLELK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+Q+ EI +IRG+ + WG QIR+YVFHPY +VKD RT ET++ +VMDGE++ FI
Sbjct: 299 RKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEIDQFIA 358
Query: 363 SYLK 366
+YL+
Sbjct: 359 AYLQ 362
>gi|325291337|ref|YP_004267518.1| peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
glycolicus DSM 8271]
Length = 371
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 236/359 (65%), Gaps = 3/359 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
+K++E R+ ++R S + E ++ +LE + FWD+R+ AQ+ +Q LT KDK+
Sbjct: 6 KKEIENLVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQELTGNKDKV 65
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
L + KT+ +D + ++ M+ D+ L +E I + D+ EL LLSG YD+
Sbjct: 66 ALFGELKTETEDLEVLWQMA--MEEDDSSLEDEIVKDIHRIRAQYDELELEILLSGEYDR 123
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A+I++ +GAGGT+AQDW ML RMY+RWGE++RYK ++ GEEAGIKS + G
Sbjct: 124 NNAIITLHSGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTFSLAG 183
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
A+GY EKG HR+VR SPF++ G R TSF+ +V+P + E+ M++ I EDL++
Sbjct: 184 ENAFGYAKCEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNED-MEINIDSEDLKVDTY 242
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQ+VNK ++AVRITHIP+G+ V+C ERSQ+ N+ + L+AKLL + +Q+
Sbjct: 243 RSGGAGGQHVNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKRKQQE 302
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ WG QIR+YVFHPY +VKD RT ET ++ SVMDGE++ FI +YLK
Sbjct: 303 EELLEIRGELNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISAYLK 361
>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
Length = 341
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 155/337 (45%), Positives = 229/337 (67%), Gaps = 3/337 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+ +AELE+ D +FW+++ +AQ+T+Q LT +KDK+ D K +D + +L E
Sbjct: 5 EERIAELELMITDPTFWEDQEQAQKTMQELTGLKDKVKSFFDLYQKWEDLGVLRELGAEE 64
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
+ D +L+E I+ + LD++ L LL+GPYD+ A++++ AGAGGT+A DW +ML
Sbjct: 65 EDPD--ILQEIEEGIQTIQSELDRWHLQLLLNGPYDRNNALVTLHAGAGGTEAMDWNEML 122
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
+RMY+RWGEK+ YK +++ G+EAG+KSA + G AYGYL GE G HR+VR SPF+
Sbjct: 123 MRMYIRWGEKKGYKVDILDSLAGDEAGMKSATLSFSGENAYGYLKGEMGVHRLVRISPFD 182
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A G R TSF+ EV+P + ++ +D+QI EDL++ RA G GGQ+VNK E+AVRITHIP
Sbjct: 183 ASGRRHTSFASVEVLPEVSDD-IDIQINSEDLKVDTFRASGAGGQHVNKTESAVRITHIP 241
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V C ERSQ+ N+ A+ L+AKL +++A E+ +++GD +G QIR+YV
Sbjct: 242 TGIVVACQSERSQIQNRATAMRMLQAKLFERQRQEQADEVNRLKGDQQDIAFGSQIRSYV 301
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
FHPY LVKD RT E + +VMDGE++ F+ +Y+ +
Sbjct: 302 FHPYNLVKDHRTNCEVGAVYNVMDGEIDDFVSAYMIW 338
>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
Length = 373
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 244/362 (67%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++ V ++ EIR L ++++ L+E+E + A FW++ +AQ ++ +
Sbjct: 8 LKEQVSKLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQE 67
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + K++D+ ++++ EE D LL+EA ++ +L+K LD+ E+ ++LSG +D
Sbjct: 68 LEAFKSVEQKIEDSEVLIEMAEE--EQDGSLLDEAEQMLSDLDKTLDRLEVKKVLSGEFD 125
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A+++I AGAGGT++ DWA ML+RMY+RW E++ ++ +++ EEAGIKSA + ++
Sbjct: 126 KNNAIVTIHAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIK 185
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYG+L E GTHR+VR SPF+A R TSF G V+P + +E ++V+I EEDL I
Sbjct: 186 GPYAYGFLRAEHGTHRLVRISPFDANARRHTSFCGVIVVPEI-DEDIEVEIKEEDLRIDT 244
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK ++AVRITHIPTG+ V C ERSQ+ N+ +A+ LKA+L + ++R
Sbjct: 245 YRASGAGGQHVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKR 304
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+I Q RG+ WG QIR+Y+F PY+LVKD RTG ETS+I +VMDG+++ FI++YLK
Sbjct: 305 EEKIAQARGEHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYLK 364
Query: 367 YK 368
K
Sbjct: 365 QK 366
>gi|302875854|ref|YP_003844487.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
gi|302578711|gb|ADL52723.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
Length = 369
Score = 327 bits (837), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 230/356 (64%), Gaps = 3/356 (0%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D++ S +EE+ A + +L L ELE +S FWDN AQ +KD+I+L
Sbjct: 10 DIKELSKTIEEMGALLDIPKLTLTLEELEGSMQESGFWDNLERAQSVTARAKGIKDRIDL 69
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+F++ ++D ++++ ++ D+ L+ E + I L+ +++ L +LSG YD
Sbjct: 70 YNNFQSSVEDIKVLIEMA--IEENDSSLVTEVYNEISTLSDSVENLRLELMLSGEYDTNN 127
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
A++++ +G GGTDA DW +MLLRMY RW EK+ + ++ +G+EAGIKSA ++V G Y
Sbjct: 128 AIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKAFNVETLDLQVGDEAGIKSATLKVTGLY 187
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL EKG HR+VR SPFNA G RQTSF+ EV P L ++ +V+I DL++ RA
Sbjct: 188 AYGYLKAEKGIHRLVRISPFNANGKRQTSFASLEVTPELRQDQ-NVEINPSDLKVDTYRA 246
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VNK E+A+RITHIPTG+ V+C ERSQ+ N+ AL+ LK+KL+ + E +
Sbjct: 247 SGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQIQNRETALNMLKSKLVELKERAHKEK 306
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
I+ + GD WG QIR+YVFHPY +VKD RT + +D+ VMDGEL+ FIK YL
Sbjct: 307 IEDLTGDLKDMGWGSQIRSYVFHPYTMVKDHRTNIQVNDVYKVMDGELDVFIKGYL 362
>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 372
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 234/356 (65%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + LE EL LE + + FW + +Q+ LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMRVSLDIDGLESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ ++ + + EE + L + +D+F++ LL+GPYDK A
Sbjct: 71 QKLYSQWEDLKVLTELS--IEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ I + G A
Sbjct: 129 ILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI R+
Sbjct: 189 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTYRSS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 248 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ + WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 308 QKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|333980674|ref|YP_004518619.1| peptide chain release factor 2 [Desulfotomaculum kuznetsovii DSM
6115]
gi|333824155|gb|AEG16818.1| peptide chain release factor 2 [Desulfotomaculum kuznetsovii DSM
6115]
Length = 366
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 240/365 (65%), Gaps = 3/365 (0%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ L +++E R+EE+R S + Q E+E+ LE D FW++ +AQ+ Q L +
Sbjct: 2 YAELSRELENLGKRIEELRVSLDIAQKEEEIKRLEEAMLDPGFWNDPEQAQQVTQKLAAL 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KD++ + +D V V L + D + E A +K+L + +++ EL LLSG
Sbjct: 62 KDRVAQYRELARVQEDLV--VLLDLGEEEEDETVAREVAGELKKLARRVEKMELEVLLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
PYD+ A++S+ AGAGGT+AQDW +MLLRMY RW E++ Y+ +++ G+EAGIKS
Sbjct: 120 PYDRGNAIVSLHAGAGGTEAQDWVEMLLRMYTRWAEEKGYRVTIMDMLPGDEAGIKSVTF 179
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
V G AYGYL EKG HR+VR SPF+A G R TSF+ +V+P + EE + ++I EDL+
Sbjct: 180 SVAGPNAYGYLRAEKGVHRLVRISPFDAAGRRHTSFASVDVLPEV-EEDVQLEIRPEDLK 238
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I R+ G GGQ+VNK E+AVRITH+PTG+ V+C ERSQ+AN+ A+ L+AKLL +
Sbjct: 239 IDTFRSSGAGGQHVNKTESAVRITHLPTGIVVQCQSERSQIANRNAAMKLLRAKLLDLEM 298
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+++ +E+ +RG+ + WG QIR+YVFHPY LVKD RTG E ++ +VMDGE++ FI +
Sbjct: 299 KKKEAELAALRGEQGEIAWGNQIRSYVFHPYSLVKDHRTGVEVGNVQAVMDGEIDEFISA 358
Query: 364 YLKYK 368
YL+ K
Sbjct: 359 YLRQK 363
>gi|303280341|ref|XP_003059463.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459299|gb|EEH56595.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 289
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/280 (53%), Positives = 202/280 (72%), Gaps = 16/280 (5%)
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L E + + L AL+ +E +LL G YD GA + I AGAGGTDAQDW++ML R Y++
Sbjct: 14 LASEVSDAVNALEGALEAWEARRLLGGTYDALGATVFIYAGAGGTDAQDWSEMLERCYLQ 73
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGL-- 214
W +++ + RV ++ G+EAG+KS +E+EGRYAYGYL+ EKGTHR+VR SPFN
Sbjct: 74 WADRRGFAVRVEARTPGDEAGLKSVTLEIEGRYAYGYLASEKGTHRLVRTSPFNKGAFSF 133
Query: 215 ----RQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
RQTSF+ +VMP L E+ +E++ R+GG GGQNVNKVETAVR+ H+P
Sbjct: 134 IHATRQTSFAAVDVMPTL----------EDKIEVTTMRSGGAGGQNVNKVETAVRMKHLP 183
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ VRC EERSQ N+ KA++RLKAKL +AEE+R +++ +RGD VKAEWGQQIRNYV
Sbjct: 184 TGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVKAEWGQQIRNYV 243
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
FHPYK+VKDVRTG ETSD+ VM+G+L+ F ++L+++ S
Sbjct: 244 FHPYKMVKDVRTGMETSDVEGVMNGKLDEFQNAWLRWRAS 283
>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
Length = 365
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 241/365 (66%), Gaps = 3/365 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ + +R +++ S+R+ + + S ++Q E E+ E + + + FWD++ +AQE + A
Sbjct: 2 EIHEIRSEIKKMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+KDK+N + ++++ +L ++ DA L E S I+E+++ L++FEL LLS
Sbjct: 62 IKDKVNTFYSLEGEVEELAVAFELI--LEEPDADLQAELESQIEEVSEHLNKFELEILLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
GPYD A++ + GAGGT++QDWA+ML RMY R+ E++ +K V++ +GEEAGIKS
Sbjct: 120 GPYDANNAILELHPGAGGTESQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
I+++G A+GY E+G HR+VR SPF++ G R TSF +VMP + +D++I EDL
Sbjct: 180 IKIKGTNAFGYFKAERGVHRLVRISPFDSGGRRHTSFCSCDVMPEFSGD-IDIEIRAEDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+I RA G GGQ++N ++AVRITHIPT V C +RSQ+ N+ A+ LK+KL
Sbjct: 239 KIDTYRASGAGGQHINTTDSAVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT +E ++ SVMDG+L+ FI
Sbjct: 299 LEEQEAELAKIRGEVKEIGWGSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFID 358
Query: 363 SYLKY 367
+YL+Y
Sbjct: 359 AYLRY 363
>gi|384136540|ref|YP_005519254.1| hypothetical protein TC41_2844 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290625|gb|AEJ44735.1| hypothetical protein TC41_2844 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 342
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/330 (46%), Positives = 217/330 (65%), Gaps = 4/330 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWDN AQ+ + + VK ++ + ++ DA ++L +E D D L
Sbjct: 1 MAAPD--FWDNPDRAQKIIAEMNGVKSVVDTMKRLESLHQDAEVALQLAQEEDDPD--LF 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
EA + ++L +D+FEL +LSG YDK A++ + GAGGT++QDWA MLLRMY RW
Sbjct: 57 AEANRLAEQLKSEMDEFELQLMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E YK V++ GEEAGIKS + V+G AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 117 EDHGYKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ +V+P + E+ ++I E+L I R+ G GGQ+VN ++AVRITHIPTG+ V C
Sbjct: 177 FASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQ 236
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A+ LK++L E+R E+ Q+RG+ + WG QIR+YVFHPY LVK
Sbjct: 237 SERSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVK 296
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
D RT +ETS+ +VMDGE++PFI +YL+++
Sbjct: 297 DHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 326
>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
Length = 373
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 233/353 (66%), Gaps = 3/353 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+RAS + + E+AELE KA++ FW++ +Q+ LQ +K KI+ + ++
Sbjct: 18 LEEMRASLDIASISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIDRFNNITSQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ +L ++ D ++ E ++ L L+ L LL+GPYDK A++++ AG
Sbjct: 78 EDLFTLSELG--LEEQDESVIPEVGEGLQLLKHNLEALRLETLLTGPYDKNNAILTLHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDW MLLRM+ RWGE + Y+ ++++ G+EAGIKS I V G AYGYL E
Sbjct: 136 AGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
KG HR+VR SPF++ G R TSF+ A+VMP L ++++++ I +DL + RA G GGQ++
Sbjct: 196 KGVHRLVRISPFDSSGRRHTSFASADVMPEL-DDTIEININPDDLRVDTYRASGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++A+RITHIPTGV V C ERSQ NK A+ LKAKL + E ++ +I+ ++G
Sbjct: 255 NKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
++ WG QIR+YVF PY LVKD RT +E ++ +VMDGEL+ FI +YL + S
Sbjct: 315 MEIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYLSMEKS 367
>gi|251780395|ref|ZP_04823315.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
E Beluga']
gi|243084710|gb|EES50600.1| peptide chain release factor 2 [Clostridium botulinum E1 str. 'BoNT
E Beluga']
Length = 325
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 212/321 (66%), Gaps = 4/321 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ A+E + +KDKI + ++K+DD I L E MD D E + I
Sbjct: 6 FWNDTKRAEEITKESKRIKDKIQRVESVQSKLDD---IEVLKEMMDDDDEESAYEIINNI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
KE+ + +D + + LLSG YDK A++++ G GGTDA DW +MLLRMY RW EK+ YK
Sbjct: 63 KEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKNYKV 122
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS ++V G YAYGYL EKG HR+VR SPFNA G RQTSF+ EV+
Sbjct: 123 EVIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVL 182
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +E D+ I ED+++ RA G GGQ++NK ++AVRITHIPTGV V+C ERSQ +
Sbjct: 183 PELTKEQ-DIDIRSEDIKVDTYRASGAGGQHINKTDSAVRITHIPTGVVVQCQNERSQFS 241
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ LKAKL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT E
Sbjct: 242 NKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTNVE 301
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
S++ +VMDG+L+ FI SYLK
Sbjct: 302 VSNVTAVMDGDLDLFINSYLK 322
>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
gi|254790911|sp|B8G607.1|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
Length = 367
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 161/360 (44%), Positives = 235/360 (65%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L +++E +R +R L + E+ +LE++A+D W+ AQE +Q LT +K++
Sbjct: 5 LHEELETIRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEE 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L D +M +++L E+ D L + A+ ++ + + + Q EL LLSGPYD
Sbjct: 65 VALWNDLDHRMTSLAELIELAEQ--EGDESLAADLAAELRAVQREVAQRELEILLSGPYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A +SI AG GGTDAQDWA MLLRMY RW E++ Y +++ S GEEAGIKSA IE+
Sbjct: 123 DRDAFLSIQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIR 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGY E G HR++R SPFNA RQTSF+ EVMP + +++ +V+I EDL I
Sbjct: 183 GPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEV-DDAPEVEIKPEDLRIDV 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQ VN ++AVRITH+PTG+ V C ERSQ+ N+ AL L+A+LL +++
Sbjct: 242 FRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQ 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E ++RG+ +A +G Q+R Y HP LVKD RT +ETS++ +V+DGE++PFI+++L+
Sbjct: 302 AEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLR 361
>gi|359410417|ref|ZP_09202882.1| peptide chain release factor 2 [Clostridium sp. DL-VIII]
gi|357169301|gb|EHI97475.1| peptide chain release factor 2 [Clostridium sp. DL-VIII]
Length = 364
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 165/349 (47%), Positives = 223/349 (63%), Gaps = 4/349 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+ AS LE+EL ELE + ++ FWD+ A+E + +KDKI K+ +
Sbjct: 19 IEEMGASLDRGGLERELHELECQMQEAGFWDDSKRAEEVTKKSKLIKDKIENFDKLKSDI 78
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D I L E M+ D E IK + +D + + LLSG YDK A++++ G
Sbjct: 79 ED---IEVLKEIMEEDDEESASEIIQTIKGIEDKIDDYNMKVLLSGEYDKNNAILTLHVG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
GGTDA DW +MLLRMY RW EKQ Y ++ G+EAGIKS ++V G YAYGYL E
Sbjct: 136 VGGTDANDWTEMLLRMYTRWCEKQGYSLETLDLLPGDEAGIKSVTLKVIGEYAYGYLKAE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
KG HR+VR SP+NA G RQTSF+ EV+P L +E D+ I +DL I R+GG GGQ+V
Sbjct: 196 KGIHRLVRISPYNANGKRQTSFASMEVLPELTKEQ-DINIKPDDLRIDTYRSGGAGGQHV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++AVRITH+PTG+ V+C ERSQ ANK A+ LK+KL+ + E +I+ + G+
Sbjct: 255 NKTDSAVRITHLPTGIVVQCQNERSQFANKDTAMEMLKSKLVELKERAHKEKIEDLTGEL 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
WG QIR+YVFHPY +VKD RT ETS++ +VMDGE++ FI +YLK
Sbjct: 315 KDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVTAVMDGEIDMFINAYLK 363
>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
OL]
gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
OL]
Length = 372
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 166/356 (46%), Positives = 236/356 (66%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + +LE EL LE + ++ FW + +Q+ LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMRVSLDIDRLENELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ E + D + EE + +L + ++ F++ LL+GPYDK A
Sbjct: 71 QKLYSQWEDLKVLTELSLEEGNHD--MAEELEKELLDLERKIEDFKIEVLLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ + + G A
Sbjct: 129 ILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI RA
Sbjct: 189 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRAS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 248 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ + WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 308 QKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|440783102|ref|ZP_20960913.1| peptide chain release factor 2 [Clostridium pasteurianum DSM 525]
gi|440219677|gb|ELP58888.1| peptide chain release factor 2 [Clostridium pasteurianum DSM 525]
Length = 327
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 153/321 (47%), Positives = 215/321 (66%), Gaps = 3/321 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN +AQE Q +KD++ L+ +++D +++++++E + D +L E S I
Sbjct: 6 FWDNMKKAQEITQKSKMLKDRVELVNSLDERLEDTRSLIEMSKEEEDED--ILNEIVSEI 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL ++ F + LLSG YD+ A++ + GAGGTDAQDW +MLLRMY RW E + +K
Sbjct: 64 NELTVRIENFRIELLLSGEYDRNNAILDLHTGAGGTDAQDWTEMLLRMYTRWAESKNFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAG+KSA +++ G +AYGYL EKG HR+VR SPFNA G RQTSF+ EV+
Sbjct: 124 ETIDLLPGDEAGVKSAALKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVI 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L E+ D+ I EDL I RA G GGQ+VNK E+A+RITHIPTG+ V+C ERSQ +
Sbjct: 184 PELT-ENQDINIKAEDLRIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQHS 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A++ LKAKL+ + E +I+ + G+ +G QIR+YVFHPY +VKD RTG E
Sbjct: 243 NRESAMAMLKAKLVELKERAHKEKIEDLTGELKDNGFGSQIRSYVFHPYTMVKDHRTGFE 302
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
++I SVMDG ++ FI YLK
Sbjct: 303 VANINSVMDGNIDSFITEYLK 323
>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
Length = 351
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 223/339 (65%), Gaps = 6/339 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
L +L+ +A + WD+ AQ ++ + D++++I F + D + + +S
Sbjct: 16 LEQLQKEAENPGIWDDPTSAQRLMKRIADLREEIEGWNQFLKRCQDGLELA------ESE 69
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D L E+ I L K L Q ELT LLSGPYD E A+++I AGAGGTD+QDWA ML+RM
Sbjct: 70 DESLREDLEKEISALEKELQQRELTTLLSGPYDHENALLTINAGAGGTDSQDWASMLMRM 129
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y+RW E++ + + +++ S GEEAGIKS I V G YAYGYL GEKG HR+VR SPF+A
Sbjct: 130 YLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRLVRLSPFDAAH 189
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF+ EV+P + ++QI +DL I R+ GGQNV K TAVRITHIPTG+
Sbjct: 190 RRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATAVRITHIPTGI 249
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ A+ L+A+L + +++ ++ ++RG+ +KAEWG QIR+YV HP
Sbjct: 250 VVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWGSQIRSYVLHP 309
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
Y+LVKD RT +ET + +V+DGEL+ FI++YL+ + + S
Sbjct: 310 YQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQKTKS 348
>gi|344997089|ref|YP_004799432.1| hypothetical protein Calla_1875 [Caldicellulosiruptor lactoaceticus
6A]
gi|343965308|gb|AEM74455.1| hypothetical protein Calla_1875 [Caldicellulosiruptor lactoaceticus
6A]
Length = 370
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 235/356 (66%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + +LE EL LE + + FW + +Q+ LQ + +KDKI
Sbjct: 9 LEKAEEDLKEMRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERF 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ +D + + EE + +L + ++ F++ LL+GPYDK A
Sbjct: 69 QKLYSQWEDLKVLTELS--LDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNA 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ + + G A
Sbjct: 127 ILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI RA
Sbjct: 187 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRAS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 246 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ + WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 306 QKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361
>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
LAA1]
Length = 342
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 218/330 (66%), Gaps = 4/330 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ AQ+ + + VK ++ + ++ + DA ++L +E D D L
Sbjct: 1 MAAPD--FWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHD--LF 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
EA + ++L +D+FEL +LSG YDK A++ + GAGGT++QDWA MLLRMY RW
Sbjct: 57 AEANRLAEQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E YK V++ GEEAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 117 EDHGYKVEVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ +V+P + E+ ++I E+L I R+ G GGQ+VN ++AVRITHIPTG+ V C
Sbjct: 177 FASVDVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQ 236
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A+ LK++L E+R E+ Q+RG+ + WG QIR+YVFHPY LVK
Sbjct: 237 SERSQIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVK 296
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
D RT +ETS+ +VMDGE++PFI +YL+++
Sbjct: 297 DHRTNYETSNTQAVMDGEIDPFIHAYLRWQ 326
>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
Length = 373
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 156/348 (44%), Positives = 229/348 (65%), Gaps = 3/348 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+RAS + ++ E+AELE KA++ FW++ +Q+ LQ +K KI + ++
Sbjct: 18 LEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ +L ++ D ++ E + +L L+ L LL+GPYDK A++++ AG
Sbjct: 78 EDLFTLAELG--LEEQDESVIPEVGEGLVQLKNNLESLRLETLLTGPYDKNNAILTLHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDW MLLRM+ RWGE + Y+ ++++ G+EAGIKS I V G AYGYL E
Sbjct: 136 AGGTEAQDWVQMLLRMFTRWGEAKGYEVKILDYLDGDEAGIKSVTIHVIGENAYGYLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
KG HR+VR SPF++ G R TSF+ +VMP L ++++++ I +DL I RA G GGQ++
Sbjct: 196 KGVHRLVRISPFDSSGRRHTSFASLDVMPEL-DDTIEININPDDLRIDTYRASGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++A+RITHIPTGV V C ERSQ NK A+ LKAKL + E ++ +I+ ++G
Sbjct: 255 NKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVF PY LVKD RT +E ++ +VMDGEL+ FI +YL
Sbjct: 315 MDIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGFINAYL 362
>gi|312792717|ref|YP_004025640.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179857|gb|ADQ40027.1| hypothetical protein Calkr_0478 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 372
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 235/356 (66%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + +LE EL LE + + FW + +Q+ LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMRVSLDIDRLESELKSLENETSSPDFWQDLENSQKVLQKIKRLKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ +D + + EE + +L + ++ F++ LL+GPYDK A
Sbjct: 71 QKLYSQWEDLKVLTELS--LDEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ + + G A
Sbjct: 129 ILSIHAGAGGTEAQDWAEMLLRMYTRWAVKKGYKVETLDILPGEEAGIKNVTVRIVGENA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI RA
Sbjct: 189 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRAS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 248 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ + WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 308 QKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|376261889|ref|YP_005148609.1| peptide chain release factor 2 [Clostridium sp. BNL1100]
gi|373945883|gb|AEY66804.1| peptide chain release factor 2 [Clostridium sp. BNL1100]
Length = 373
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/348 (45%), Positives = 230/348 (66%), Gaps = 3/348 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+EE+RAS + ++ E+AELE KA++ FW++ +Q+ LQ +K KI + ++
Sbjct: 18 LEEMRASLDIARISDEIAELEHKASEPEFWNDMENSQKILQKTKILKTKIERFNNITSQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D T+ +L ++ D ++ E ++ L L+ L LL+GPYDK A++++ AG
Sbjct: 78 EDLFTLSELG--LEEQDESVIPEVGEGLQLLKHNLESLRLETLLTGPYDKNNAILTLHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDW MLLRM+ RWGE + Y+ +V++ G+EAGIKS I V G AYGYL E
Sbjct: 136 AGGTEAQDWVQMLLRMFTRWGEAKGYEVKVLDYLDGDEAGIKSVTIHVIGENAYGYLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
KG HR+VR SPF++ G R TSF+ A+VMP L ++++++ I +DL I RA G GGQ++
Sbjct: 196 KGVHRLVRISPFDSSGRRHTSFASADVMPEL-DDTIEININPDDLRIDTYRASGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++A+RITHIPTGV V C ERSQ NK A+ LKAKL + E ++ +I+ ++G
Sbjct: 255 NKTDSAIRITHIPTGVVVSCQTERSQFQNKDTAMKMLKAKLFELKEREQKEKIEDLKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
++ WG QIR+YVF PY LVKD RT +E ++ +VMDGEL+ I +YL
Sbjct: 315 MEIAWGSQIRSYVFCPYTLVKDHRTNYEEGNVDAVMDGELDGIINAYL 362
>gi|336429368|ref|ZP_08609334.1| peptide chain release factor 2 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336002679|gb|EGN32781.1| peptide chain release factor 2 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 334
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/322 (46%), Positives = 214/322 (66%), Gaps = 3/322 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN + + ++ L ++KD + + T+ +D T++++ E D D + EE S +
Sbjct: 6 FWDNPEYSNKKMKELKNLKDTVEQIEHLSTQYEDIETLIEMGNEED--DESMAEEIRSEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
L+ ++ LL+G YDK GA++ + AGAGGT++ DW ML RMY RW E++ +
Sbjct: 64 DSFTDELETLRISTLLTGEYDKNGAILKLNAGAGGTESCDWCSMLYRMYTRWAERKGFTL 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS +V G AYGYL EKG HR+VR SPFNA+G RQTSF +VM
Sbjct: 124 EVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAQGKRQTSFVSLDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +D++I EEDL I R+ G GGQ++NK +A+RITH+PTG+ V+C ERSQ
Sbjct: 184 PDI-EEDLDIEINEEDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKL ++ +E+ A ++ IRG+ + WG QIR+YVF PY +VKD RT HE
Sbjct: 243 NKDKAMQMLKAKLYMLRQEENAQKLSGIRGEVKEIGWGNQIRSYVFQPYTMVKDHRTNHE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKY 367
T ++ +VMDG L+PFI +YLK+
Sbjct: 303 TGNVDAVMDGALDPFINAYLKW 324
>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
Length = 333
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 221/325 (68%), Gaps = 3/325 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ FWD+ AQ+T+Q LT +KDK+ D +++ +D + +L E DA +L E
Sbjct: 4 EPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAE--ENDAEILAEIE 61
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+ I+ + LD++ L LL+GPYD+ A++++ AGAGGT+A DW +MLLRMY+RWGEK+
Sbjct: 62 AGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKRG 121
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
YK +++ G+EAGIKSA + V G AYGYL GE G HR+VR SPF++ G R TSF+
Sbjct: 122 YKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFASL 181
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P + + ++QI EDL++ RAGG GGQ+VNK E+AVRITHIPTG+ V C ERS
Sbjct: 182 EVLPEVS-DGAEIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERS 240
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q+ N+ A+ L+AKL +++ +E+ +++GD +G QIR+YVFHPY LVKD RT
Sbjct: 241 QIQNRATAMRMLQAKLFERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVKDHRT 300
Query: 343 GHETSDIVSVMDGELEPFIKSYLKY 367
E ++ +VMDGEL+ FI +YL +
Sbjct: 301 NTEVGNVHAVMDGELDEFISAYLVW 325
>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
2522]
gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
2522]
Length = 366
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 157/362 (43%), Positives = 233/362 (64%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+++++ A + R+ + R S L++ E +AELE +D SFWDN+ AQ+ + +K+
Sbjct: 6 IKQELAAMAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEM 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ + + + +D +L +E D L + + IKEL K + FEL LLS PYD
Sbjct: 66 VDTYRELEAEQEDLDVSYELVKE--EGDEELAADLHAGIKELGKKFNDFELQLLLSEPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDWA MLLRMY RW + + +K ++ G+EAG+KS + +
Sbjct: 124 KNNAILELHPGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMIS 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF EVMP L +++++++I + L+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEL-DDNVEIEISPDQLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVRITH+PT V C ERSQ+ N+ +A+ LKAKL + E++
Sbjct: 243 YRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQ 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ WG QIR+YVFHPY +VKD RT +ET + SVMDGEL+PFI +YL+
Sbjct: 303 QQELDEIRGEQSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLR 362
Query: 367 YK 368
K
Sbjct: 363 SK 364
>gi|429767404|ref|ZP_19299603.1| peptide chain release factor 2 [Clostridium celatum DSM 1785]
gi|429181012|gb|EKY22207.1| peptide chain release factor 2 [Clostridium celatum DSM 1785]
Length = 325
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 218/321 (67%), Gaps = 5/321 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ A++ + +KDKI+ T++DD + +L E+ + T + E I
Sbjct: 6 FWDDIKRAEDVTKESKRIKDKIDRYESLVTRLDDVEVLAELAEDDEET----INEVIVEI 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+++ K +D++++ LLSG YDK A++++ AG GG+DA DW MLLRMY RW EK+ YK
Sbjct: 62 RDIEKLIDEYKIELLLSGEYDKNDAILNLHAGVGGSDANDWTLMLLRMYTRWCEKKGYKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKSA + V+G +AYGYL EKG HR+VR SPFNA G RQTSF+ EV+
Sbjct: 122 ETLDLLEGDEAGIKSATLRVKGEFAYGYLKAEKGVHRLVRISPFNANGKRQTSFASIEVL 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L ++ D++I +EDL+I RA G GGQ+VNK E+A+RITHIPTG+ V+C ERSQ A
Sbjct: 182 PELTKDQ-DIEIRQEDLKIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQFA 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+S LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT E
Sbjct: 241 NKDTAMSMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNMVKDHRTNEE 300
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
TS++ +VM+GE++ FI +YLK
Sbjct: 301 TSNVNAVMNGEIDAFITTYLK 321
>gi|255987637|ref|YP_001884728.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
17B]
gi|255961470|gb|ACD21926.2| peptide chain release factor 2 [Clostridium botulinum B str. Eklund
17B]
Length = 325
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 212/321 (66%), Gaps = 4/321 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ A+E + +KDKI + ++K+DD I L E MD D E + I
Sbjct: 6 FWNDTKRAEEITKESKRIKDKIQRVESVRSKLDD---IEVLKEIMDDDDEESAYEIINNI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
KE+ + +D + + LLSG YDK A++++ G GGTDA DW +MLLRMY RW EK+ YK
Sbjct: 63 KEIEEEIDNYNMEILLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKKNYKV 122
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+++ G+EAGIKS ++V G YAYGYL EKG HR+VR SPFNA G RQTSF+ EV+
Sbjct: 123 EMIDLLEGDEAGIKSVTLKVIGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVL 182
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +E D+ I ED++I RA G GGQ++NK ++AVRITH+PTGV V+C ERSQ +
Sbjct: 183 PELTKEQ-DIDIRSEDIKIDTYRASGAGGQHINKTDSAVRITHLPTGVVVQCQNERSQFS 241
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ LKAKL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT E
Sbjct: 242 NKDTAMGMLKAKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRTNVE 301
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
S++ +VMDG+L+ F+ SYLK
Sbjct: 302 VSNVTAVMDGDLDLFVNSYLK 322
>gi|225027512|ref|ZP_03716704.1| hypothetical protein EUBHAL_01768 [Eubacterium hallii DSM 3353]
gi|224955151|gb|EEG36360.1| peptide chain release factor 2 [Eubacterium hallii DSM 3353]
Length = 371
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 226/350 (64%), Gaps = 3/350 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ S L +++ ELE + + FW++ +AQE + + ++KD ++ + +
Sbjct: 18 MKELGVSLALSHKHEQIKELESEMREEGFWNDPDKAQEVTRKVKNLKDTVSAYHALELTL 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD T+++L E DA ++ + ++ E D ++ LLSG YDK A++++ AG
Sbjct: 78 DDVSTMIELGNE--ENDASVIPDIEELLGEFEIEFDNLKIQTLLSGEYDKNNAIVTLHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT++ DWA ML RMY +W + +KT V++ G+EAGIKS EV G AYGYL E
Sbjct: 136 AGGTESCDWAGMLYRMYSKWADSHGFKTEVLDYLDGDEAGIKSITFEVNGENAYGYLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
+G HR+VR SPFNA G RQTSF+ +VMP + EE + V+I +ED+ I RA G GGQ++
Sbjct: 196 RGVHRLVRISPFNAAGKRQTSFASCDVMPDI-EEDLSVEIADEDIRIDTYRASGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++A+RITHIPTGV V+C ERSQ NK KA+ LKAKL +I E++ ++ IRG+
Sbjct: 255 NKTDSAIRITHIPTGVVVQCQNERSQHKNKDKAMQMLKAKLYLIKEQENREKLSDIRGEV 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
WG QIR+YV PY +VKD RTG ET ++ SVMDG L+ F+ +YL++
Sbjct: 315 SDNGWGNQIRSYVMQPYTMVKDHRTGEETGNVQSVMDGNLDAFMNAYLRW 364
>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
6725]
gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
6725]
Length = 372
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 231/356 (64%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+ + LE EL LE + + FW + +Q LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMGFLFDIDGLESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ ++ + + EE + L + +D+F++ LL+GPYDK A
Sbjct: 71 QKLYSQWEDLKVLTELS--IEEGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ I + G A
Sbjct: 129 ILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI R+
Sbjct: 189 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTYRSS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 248 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ + WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 308 QKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
hydrothermalis 108]
Length = 370
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 235/356 (66%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + +LE EL LE + + FW + +Q+ LQ + +KDKI
Sbjct: 9 LEKAEEDLKEMRVSLDIDRLESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERF 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ ++ + + EE + +L + ++ F++ LL+GPYDK A
Sbjct: 69 QKLYSQWEDLKVLTELS--LEEGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNA 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ + + G A
Sbjct: 127 ILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI RA
Sbjct: 187 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRAS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 246 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ + WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 306 QKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 361
>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
BON]
gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
australiensis 50-1 BON]
Length = 353
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 223/337 (66%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+ LE + AD SFW + +Q+ Q + +KDK+ L + K +D T+ L E
Sbjct: 12 MEEEIKNLEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTLADLGRE 71
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D DA ++ E A+ + L K +++ + LLSGPYD+ A++++ AGAGGT+AQDW M
Sbjct: 72 ED--DASIVGEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQDWVQM 129
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY RW E + YK V++ G+EAGIKS VEG AYGYL EKG HR+VR SPF
Sbjct: 130 LYRMYTRWAEDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVRISPF 189
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+A G R TSF+ +VMP L ++ V+I EDL+I R+ G GGQ+VNK E+A+RITHI
Sbjct: 190 DAAGRRHTSFASVDVMPELDDDE-GVEINPEDLKIDTYRSSGAGGQHVNKTESAIRITHI 248
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V+C ERSQ +NK A+ LKAKLL + E++ ++I I+G+ + EWG QIR+Y
Sbjct: 249 PTGIVVQCQNERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQIRSY 308
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+F PY +VKD RT E ++ +VMDG+++ FI YLK
Sbjct: 309 IFQPYTMVKDHRTNAEIGNVNAVMDGDIDLFISEYLK 345
>gi|397690960|ref|YP_006528214.1| peptide chain release factor 2 [Melioribacter roseus P3M]
gi|395812452|gb|AFN75201.1| peptide chain release factor 2 [Melioribacter roseus P3M]
Length = 329
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 158/320 (49%), Positives = 213/320 (66%), Gaps = 3/320 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW ++ AQ LQ +++ ++L + K K+D V+L + + D + E +
Sbjct: 7 FWSDQKRAQSLLQKSKSLQNWVDLWNELKEKVDHIEEFVELVKAEE--DESFITEIDKEL 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
E K + EL +LSG D + +++I +GAGGT+AQDW++ML+RMY+RWGE+ YK
Sbjct: 65 TEAEKLYSELELKSMLSGKDDDKNCILTIHSGAGGTEAQDWSEMLMRMYMRWGEQNGYKM 124
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+++ G+ AGIKSA IEVEG YAYGYL E G HR+VR SPF+A R TSF+ V+
Sbjct: 125 SIIDYLEGDGAGIKSATIEVEGLYAYGYLKAETGVHRLVRISPFDANKRRHTSFASVFVI 184
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++S+D++I DL I R+GGKGGQNVNKVETAVRITHIPTGV C ERSQL
Sbjct: 185 PEV-DDSIDIEINPADLRIDTYRSGGKGGQNVNKVETAVRITHIPTGVVAACQSERSQLQ 243
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ LK+KL + E++ +E+ +I + +K EWG QIR+YVFHPY LVKD RTG+E
Sbjct: 244 NKTNAMKLLKSKLYQLELEKQQAELNEIEKNKMKIEWGSQIRSYVFHPYNLVKDHRTGYE 303
Query: 346 TSDIVSVMDGELEPFIKSYL 365
TSD SVMDG + FIK YL
Sbjct: 304 TSDTQSVMDGNINEFIKQYL 323
>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
gi|319768218|ref|YP_004133719.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
Length = 367
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/370 (44%), Positives = 241/370 (65%), Gaps = 7/370 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +++++E + R+ EIR S L+ + + ELE + A +FWD++ AQ + +
Sbjct: 1 MIDLVEIKQELEKMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEV 60
Query: 61 TDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDS-TDAGLLEEAASIIKELNKALDQFELT 118
+KD + + + + D+ VT L EE D A L+EEA K+L K +FEL
Sbjct: 61 NALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVEEA----KKLMKDFSEFELQ 116
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGI 178
LL+ PYD+ A++ + GAGGT++QDWA MLLRMY RW EK+ +K ++ GEEAGI
Sbjct: 117 LLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGI 176
Query: 179 KSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIP 238
KS + ++G AYGYL EKG HR+VR SPF+A G R TSF EV+P L +++++++I
Sbjct: 177 KSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVVPEL-DDNIEIEIR 235
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V C ERSQ+ N+ KA++ LKAKL
Sbjct: 236 PEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKL 295
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
E++ +E+ ++RG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++
Sbjct: 296 YQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEID 355
Query: 359 PFIKSYLKYK 368
FI +YL+ K
Sbjct: 356 VFIDAYLRAK 365
>gi|375089821|ref|ZP_09736146.1| peptide chain release factor 2 [Facklamia languida CCUG 37842]
gi|374566668|gb|EHR37907.1| peptide chain release factor 2 [Facklamia languida CCUG 37842]
Length = 355
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 232/342 (67%), Gaps = 3/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ Q++ +LAE E+ + FWD++ +AQ ++ D+K+++N + K++D +V+L
Sbjct: 10 IDQMKADLAENELAMNEPGFWDDQQKAQAVIKTSNDLKERLNTFFQIEQKLEDMQVVVEL 69
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE + D L EE ++ ++ L+ ++L+ LLS +D A+I I GAGGT++QDW
Sbjct: 70 YEETE--DQSLWEELQTLQTTFSQELESYQLSLLLSQAHDSANAIIEIHPGAGGTESQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
+MLLRMY RW ++ Y+ +V++ GEEAGIKS +EV G YG+L EKG HR++R
Sbjct: 128 GEMLLRMYDRWAHQKGYQVKVIDYQNGEEAGIKSVTLEVAGNKVYGHLKSEKGVHRLIRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF +V PL+ ++S++V+I +DL I RA G GGQ++NK +AVRI
Sbjct: 188 SPFDSNGKRHTSFCSIDVTPLI-DDSIEVEINPDDLRIDTYRASGAGGQHINKTSSAVRI 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ + +RSQ+ NK +A++ LKAKL + EE++ E+ I+GD ++ WG QI
Sbjct: 247 THLPTGIVTQSQSQRSQIHNKDQAMNLLKAKLYQLEEERKQKELAAIKGDQLENAWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RTG+ET + +V+DGE++ FI +YLK++
Sbjct: 307 RSYVFHPYSMVKDHRTGYETGNAEAVLDGEIDGFIDAYLKWQ 348
>gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
gi|259585245|sp|C4L5K9.1|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
Length = 366
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 227/361 (62%), Gaps = 3/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++R ++EA + R+E RAS L + E +AELE + FWDN+ +AQ+ + +K
Sbjct: 5 DIRNELEAMAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ D + +D ++L +E DA + EE I+ L K D FEL LL+GPY
Sbjct: 65 MVDKYQDLANQHEDGEVTLELIKE--EPDAEMQEELGESIQALKKEFDDFELEILLNGPY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ + GAGGT++QDWA MLLRMY R+ +KQ +K V+ GEEAG+KS + +
Sbjct: 123 DANNAILELHPGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G AYGYL EKG HR+VR SPF++ G R TSF +VMP ++ +++++ EDL I
Sbjct: 183 VGHNAYGYLKAEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEF-DDDIEIEVRTEDLRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++N ++AVRITH+PTGV V C ERSQ+ N+ A+ LKAKL ++
Sbjct: 242 TYRASGAGGQHINTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ ++ +IRG+ WG QIR+YVFHPY +VKD RT +E + VMDG++ PFI +YL
Sbjct: 302 QQRKLDEIRGEKTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYL 361
Query: 366 K 366
+
Sbjct: 362 R 362
>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
OB47]
gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
OB47]
Length = 372
Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 165/356 (46%), Positives = 235/356 (66%), Gaps = 3/356 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + ++E+R S + +L+ EL LE + ++ FW + +Q+ LQ + +KDKI
Sbjct: 11 LEKAEEDLKEMRVSLDIDRLQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERF 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
++ +D + +L+ ++ + + EE + +L K ++ F++ LL+GPYDK A
Sbjct: 71 QKLCSQWEDLKVLTELS--IEEGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++ GEEAGIK+ I + G A
Sbjct: 129 ILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+ D++I EEDLEI RA
Sbjct: 189 YGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDDTDIEIKEEDLEIDTFRAS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL LKAKLL + E++R +I
Sbjct: 248 GAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKI 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++++G+ WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK
Sbjct: 308 QKLKGEQTDIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 365
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 239/355 (67%), Gaps = 3/355 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D ++E+ AS ++ L++E+AE++ K A+ FW++ ++QE + L D+K+ I+ +
Sbjct: 14 DTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLKELISEYESIEK 73
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+D +++L ++ D L +E K L+K ++ ++ LLSGPYD+ A++SI
Sbjct: 74 LCEDLNALIELG--IEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPYDRNNAILSIH 131
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGGT+AQDW +MLLRMY+RW + Y+ V+ G++AG+KS I V+G +AYGYL
Sbjct: 132 AGAGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMVKGAFAYGYLK 191
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
GE G HR+VR SPF+A G R TSF+ EV+P + ++ + V I EDL+I R+ G GGQ
Sbjct: 192 GEAGVHRLVRISPFDAAGRRHTSFALVEVLPEI-DDDIKVDIRPEDLKIDTYRSSGAGGQ 250
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+A+RITHIPTG+ V+C ERSQ+ N+ A+ LKAKL+ + +++ +I+ ++G
Sbjct: 251 HVNKTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKEQKEKIEDLKG 310
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+ +A WG QIR+YVF PY LVKD RT E ++ +VMDG+++ FI +YLK K S
Sbjct: 311 EHKEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFINAYLKQKVS 365
>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
Length = 377
Score = 317 bits (811), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 229/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L +++E ++R++ + S L Q EK LA LE + FW + A AQ Q + ++
Sbjct: 5 LERELEVLAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQC 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + ++ +++L E DA +L E A +K+L ++ E+ LLSGPYD
Sbjct: 65 LGRFYRLREGHEELSVLLELAAE--EGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++S+ AGAGGTDAQDW MLLRMY RW E Y+ R ++ GEEAGIKS EV
Sbjct: 123 ASNAIVSLHAGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVI 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL E+G HR++R SPF+A G R TSF+ +V+P + +++ +++I E+L I
Sbjct: 183 GPRAYGYLKAERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDDT-EIKIAPEELRIDT 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK ETAVRITH+PTG+TV C ERSQ ANK A+ L+A+LL + ++R
Sbjct: 242 FRASGAGGQHVNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKER 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +RG+ + WG QIR YV HPY LVKD RTG E DI +V+DG+++ FI++YLK
Sbjct: 302 EKELAALRGEVKEIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLK 361
>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
Length = 370
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 235/365 (64%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + E I ++ G Q L +++ LE +A+ WD++ AQ L+ +
Sbjct: 4 YDFTQDLSEARSKFETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L D + ++DD T+ +L E D D+ EA + + L E+ LL G
Sbjct: 64 NEAKRLDDLERRLDDIATLYELGSEEDDQDSKA--EAEKELTAVRSDLSDLEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD AV++I +GAGG DA DWA ML+RMY+RW E+ YK ++++ S EEAGIKSA E
Sbjct: 122 YDNRAAVVTIRSGAGGVDAADWAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFE 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ RQTSF+ EV+PL+ E + + IP+ D+ +
Sbjct: 182 VDAPYAYGKLSVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLV-EPTDHIDIPDSDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A+S L+++LLV+ +E
Sbjct: 241 DTYMSHGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVMKQE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A++ K++ GD VKA WG Q+R+YV HPY++VKD+RTG+ETSD V DG+++ FI +
Sbjct: 301 EEAAKKKELAGD-VKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFIDAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|167767702|ref|ZP_02439755.1| hypothetical protein CLOSS21_02237 [Clostridium sp. SS2/1]
gi|429761689|ref|ZP_19294105.1| peptide chain release factor 2 [Anaerostipes hadrus DSM 3319]
gi|167710441|gb|EDS21020.1| peptide chain release factor 2 [Clostridium sp. SS2/1]
gi|291558928|emb|CBL37728.1| bacterial peptide chain release factor 2 (bRF-2)
[butyrate-producing bacterium SSC/2]
gi|429183124|gb|EKY24193.1| peptide chain release factor 2 [Anaerostipes hadrus DSM 3319]
Length = 373
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 236/361 (65%), Gaps = 3/361 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ + + + +E++ S L+ ++ + +LE+ + FWDN E+Q ++ + +K
Sbjct: 7 LKYKLNSFQEPLEDLSGSLALEAKKERIDQLELNMEEPGFWDNVEESQNVMKEVKSLKGV 66
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ D KTK +D T++ + EE DA L+EEA +++ E K ++ ++ LL+G YD
Sbjct: 67 VEEYDDLKTKYEDIETLIDMAEE--DEDADLIEEATALMDEFEKTYEELRISTLLTGEYD 124
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K+ A++++ AGAGGT++ DWA ML RM+ RW K+ Y T V++ G+EAGIKS +++
Sbjct: 125 KDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKGYGTEVLDYLDGDEAGIKSVTVKIT 184
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPFNA G RQTSF+ +VMP + ++ ++V+I +ED+ I
Sbjct: 185 GMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVMPDIKDD-IEVEIADEDIRIDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK ++A+RITH+PTG+ V+C ERSQ NK +A+ LK KL ++ ++Q
Sbjct: 244 YRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQHKNKDQAMKMLKTKLYLLKQQQH 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
++ IRGD WG QIR+YV PY +VKD RT E+ + +V+DG+L+ F+ +YL
Sbjct: 304 LEKLSDIRGDVGDNGWGNQIRSYVLQPYTMVKDHRTNFESGNPSAVLDGDLDGFMNAYLA 363
Query: 367 Y 367
+
Sbjct: 364 W 364
>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
Length = 378
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 157/347 (45%), Positives = 230/347 (66%), Gaps = 4/347 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L + E+A+L ++AD W ++ AQ+ + L+ +++++N +T + +++D
Sbjct: 20 IEAVLDLDAMRAEIAKLREESADPDLWSDQERAQQVTRRLSYLENELNRVTSLRQRLEDV 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
T+ +L EEMD DA EA + ++ L K + Q E+ L+SG YD A+I+I A AGG
Sbjct: 80 ATLYELAEEMD--DADTRAEADAELESLRKDIQQLEVRTLMSGEYDHREALITINAQAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA DWA L RMY+RW E+ Y T + E S EEAGIKS V+ YAYG L GE GT
Sbjct: 138 VDAADWAQQLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFAVKAPYAYGTLRGEHGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G +V+P++ E+S V++ E DL I R+ G GGQ VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAGLDVVPVV-EQSDHVEVDENDLRIDVYRSSGPGGQGVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVRITHIPTG+ V C ERSQL NK A++ LKAKLL ++ A+++ +RG+ +
Sbjct: 257 DSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLKAKLLERKRQEEAAKMADLRGEGTSS 316
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
WG QIRNYV HPY++VKD+RTG E+ + +V+DGE++ FI++ +++
Sbjct: 317 -WGTQIRNYVLHPYQIVKDLRTGVESGNPAAVLDGEIDEFIEAEIRW 362
>gi|269925864|ref|YP_003322487.1| peptide chain release factor 2 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789524|gb|ACZ41665.1| bacterial peptide chain release factor 2 (bRF- 2) [Thermobaculum
terrenum ATCC BAA-798]
Length = 372
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/375 (45%), Positives = 246/375 (65%), Gaps = 7/375 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ L+ ++ +R+ + L+ E+ +LE +AA S W + AEAQ+ ++ L D+
Sbjct: 2 YEELKDKIDNLRERISTFKEHLDLENKRLEIEKLEQRAASSELWADPAEAQKVMKNLNDL 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KD++ + + + +++DA ++ L E DS A EAAS I+ L L+ EL LLSG
Sbjct: 62 KDQLEVWSKIERRLEDAEVLLDLAYEEDS--ASDFHEAASQIRALENQLNHLELELLLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD+E A+I+I A GG DAQDWA ML+RMY+RW +++ ++ +V GEEAG KSA I
Sbjct: 120 SYDQEDAIIAIHAREGGIDAQDWASMLVRMYLRWAQRRGWQAELVSSIEGEEAGYKSATI 179
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
E++G+YAYGY E G HR+VR SPF+ R TSF+ EV+P + EE+ +VQI EEDL+
Sbjct: 180 EIKGKYAYGYAKAEAGQHRLVRLSPFDQAHRRHTSFALVEVLPDV-EETPEVQIREEDLK 238
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I RA GGQ+VNK +AVRITHIPTG+ V C ERSQ NK AL L+A+LL +
Sbjct: 239 IDTYRASSAGGQHVNKTSSAVRITHIPTGIVVTCQNERSQFQNKETALKILRARLLELEL 298
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
++A E +++G+ + WG QIR+YV HPY +VKD RTG+E SD+ SV+DGE++PFI++
Sbjct: 299 RRQAEEQARLKGEHIATGWGSQIRSYVLHPYTMVKDHRTGYEVSDVESVLDGEIDPFIEA 358
Query: 364 YLKYKYSMSLSASDA 378
YL S +L+A D+
Sbjct: 359 YL----SQTLAAGDS 369
>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
Length = 368
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 237/361 (65%), Gaps = 3/361 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
+ ++ A +++E+ S + + E+++AELE K + +FWDN EAQ+ Q L +K +
Sbjct: 6 KPEILAMQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSV 65
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + +K DDA ++++ ++ D L E + + + A+ + EL LLSGPYD
Sbjct: 66 DKYKEIVSKTDDAQALLEMA--LEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDA 123
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + + G
Sbjct: 124 NNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFING 183
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYGYL EKG HR+VR SPF++ R TSFS ++MP + +++++V I D+ +
Sbjct: 184 HNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSACDIMPEI-DDAVEVAINMADVRVDTY 242
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
RA G GGQ++NK +AVR+TH+PTG+ V+C ERSQL N+ + + L+AKL + +E++
Sbjct: 243 RASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKE 302
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+EI+++ GD K EWG QIR+YVF PY +VKD+RTG ET ++ +VMDG+L+ FI+++L
Sbjct: 303 AEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAA 362
Query: 368 K 368
K
Sbjct: 363 K 363
>gi|256848105|ref|ZP_05553549.1| peptide chain release factor 2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715165|gb|EEU30142.1| peptide chain release factor 2 [Lactobacillus coleohominis
101-4-CHN]
Length = 332
Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 223/332 (67%), Gaps = 5/332 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FW++ +AQ+ + +K++ + T+ + ++ D T V+L +EM D L
Sbjct: 1 MTAPD--FWNDSEQAQKLINDNNQLKERRDTFTNLRDQLADLATSVELLKEMPDDD--LQ 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
+E + ++ K L+Q+ L+QLLSGPYD A++ I GAGGT+AQDW +MLLRMY+RW
Sbjct: 57 KELDQKLPQVEKQLEQYRLSQLLSGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYLRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
++ + GEEAGIKS + ++G A+GYL EKG HR+VR SPF+A G R TS
Sbjct: 117 DQHSFDVETAAYEAGEEAGIKSVTLLIKGHNAFGYLHPEKGVHRLVRISPFDAAGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ +VMP L +ES++V I DL + R+ G GGQ++NK E+AVRITH+PTG+
Sbjct: 177 FASVDVMPEL-DESVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHLPTGIVTSSQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQL N++ A++ LK+KL + +E++A + ++ G+ ++ WG QIR+YVFHPY LVK
Sbjct: 236 AERSQLQNRVTAMNMLKSKLYELEQEKQAKQRAELEGEQLEIGWGSQIRSYVFHPYTLVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
D RTG+ET D SVMDG+L+PFI +YL+++ S
Sbjct: 296 DNRTGYETHDGQSVMDGDLDPFINAYLQWQLS 327
>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
Length = 361
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 227/343 (66%), Gaps = 7/343 (2%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L +LE+++A E + ++ SFWD+ +A + +Q ++K + D KM+ A L
Sbjct: 13 LDRLEEDIAAYEQEMSEPSFWDDSEKANQVIQKNNELKS----IYDTFHKMELAHEETSL 68
Query: 87 TEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
EM + D + E I+ L K L ++EL+ LL+GP+DK A++ I GAGGT++Q
Sbjct: 69 LFEMYKEEPDEEVHAEIVEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPGAGGTESQ 128
Query: 145 DWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIV 204
DW MLLRMY+RW EK Y+ V+ G+EAGIKS + +EG AYGYL EKG HR+V
Sbjct: 129 DWGSMLLRMYMRWAEKHGYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSEKGVHRLV 188
Query: 205 RQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAV 264
R SPF+A G R TSF +V+P + + +D++I +DL++ RA G GGQ++NK +AV
Sbjct: 189 RISPFDAAGKRHTSFCSVDVVPQM-DGDIDIEINPDDLKVDVYRASGAGGQHINKTSSAV 247
Query: 265 RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQ 324
RITHIPTG+ + +RSQ N+ +A++ LKAKL + EE++A+E+ IRG+ WG
Sbjct: 248 RITHIPTGIVTQSQAQRSQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQKDIAWGS 307
Query: 325 QIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
QIRNYVFHPY +VKD+R+G+ET +I +VMDG+L+ F+ +YLK+
Sbjct: 308 QIRNYVFHPYSMVKDLRSGYETGNIGAVMDGDLDSFMDAYLKW 350
>gi|260584689|ref|ZP_05852435.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
gi|260157712|gb|EEW92782.1| peptide chain release factor 2 [Granulicatella elegans ATCC 700633]
Length = 331
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 219/329 (66%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FWD+ +AQ +Q ++K + + ++++ + ++ +E + + +E
Sbjct: 2 SEPGFWDDNEKAQMVIQKSNELKAVYDTFHQLELQVEEVELLFEMYKE--DPEEEIHDEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ + K L+++EL+ LLSGP+DK A++ I GAGGT++QDW MLLRMY RW E+
Sbjct: 60 VERVHSVEKELEKYELSMLLSGPHDKCSAILEIHPGAGGTESQDWGSMLLRMYTRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
Y+ V+ GEEAGIKS + +EG AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 120 GYRIETVDYQDGEEAGIKSVTLSIEGLNAYGYLKSEKGVHRLVRISPFDAAGKRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
++MP L E +D++I +DL+I RA G GGQ++NK +AVRITHIPTG+ + +R
Sbjct: 180 IDIMPQL-EGDIDIEINPDDLKIDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ NK +A++ LK KL + EE++A+E+ +IRG+ WG QIRNYVFHPY LVKD+R
Sbjct: 239 SQFKNKDQAMAMLKTKLYQLEEEKKAAELAEIRGEQKDIAWGSQIRNYVFHPYSLVKDLR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+GHET +I +VMDG+L+PF+ +YLK+ S
Sbjct: 299 SGHETGNIGAVMDGDLDPFMDAYLKWTLS 327
>gi|431795281|ref|YP_007222186.1| peptide chain release factor 2 (bRF-2) [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785507|gb|AGA70790.1| bacterial peptide chain release factor 2 (bRF-2)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 368
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 237/363 (65%), Gaps = 2/363 (0%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
+ +K++E R+ ++R S + Q +++ LE++ FWD+ AQ+ +Q ++
Sbjct: 2 IFEWKKELENLETRLADLRDSLDVAQRTDKISVLEIELQRPDFWDHPESAQKVMQEISYH 61
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
++K+ T + ++DD +T+ +L ++ D L E +K L + L+ EL LLSG
Sbjct: 62 QEKLKTYTSLRQQLDDLLTLYQLA--VEENDESLEPEIEEGVKALQQVLEGLELEILLSG 119
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
PYD+ A++++ AGAGGT+AQDW ML RMYVR+GE+ YK ++ G+EAGIKSA +
Sbjct: 120 PYDRNNAILTLHAGAGGTEAQDWVSMLYRMYVRYGERHGYKVETMDLLPGDEAGIKSATL 179
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
+ G AYGYL EKG HR+VR SPF+A G R TSF+ +V+P + ++ +V IP EDL+
Sbjct: 180 SISGENAYGYLKSEKGVHRLVRISPFDASGRRHTSFASMDVIPEVMDDGEEVPIPTEDLK 239
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ RA G GGQ+VNK +AVRITH+PTG+ V+ ERSQ+ N+ + L+AKLL +
Sbjct: 240 VDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCMRILQAKLLELKR 299
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+Q+ EI +IRG+ + WG QIR+YVFHPY +VKD RT ETS+ +VMDGE++ FI S
Sbjct: 300 KQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETSNTGAVMDGEIDQFIAS 359
Query: 364 YLK 366
YL+
Sbjct: 360 YLQ 362
>gi|334342136|ref|YP_004547116.1| peptide chain release factor 2 [Desulfotomaculum ruminis DSM 2154]
gi|334093490|gb|AEG61830.1| Peptide chain release factor 2 [Desulfotomaculum ruminis DSM 2154]
Length = 368
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 161/364 (44%), Positives = 231/364 (63%), Gaps = 3/364 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+D+E R++++R S + E+ +LE FWD E+Q Q L ++KDK
Sbjct: 5 IRRDLEQLGKRIQDLRVSLDIAGSRLEIEKLERGMMQEGFWDRPEESQRITQKLANLKDK 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ T+ + D I++L E + EE + + L K + EL LLSG YD
Sbjct: 65 VSAYTELEEASQDLEVILELCAEEEDPLL--EEELVTGFEALTKKVGDLELEVLLSGEYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A++S+ AGAGGT++QDW MLLRM+ R+ E +YK +++ G+EAG+KS +V
Sbjct: 123 RGSAILSLHAGAGGTESQDWVQMLLRMFTRYAENHQYKVEILDLLPGDEAGVKSVTFQVT 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF+A G R TSF+ +V+P++ E+ ++V I EDL+I
Sbjct: 183 GPNAYGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVLPVV-EDELEVNIRPEDLKIDT 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ N++ A+ LKAKL+ + ++
Sbjct: 242 YRSGGAGGQHVNKTDSAVRITHLPTGLVVACQNERSQTYNRMAAMKLLKAKLIDLELRKK 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +RGD WG QIR+YVFHPY LVKD RTG E ++ VMDGE++PFI +YLK
Sbjct: 302 EEELAALRGDQKDIAWGSQIRSYVFHPYNLVKDHRTGVEVGNVHGVMDGEIDPFIAAYLK 361
Query: 367 YKYS 370
K S
Sbjct: 362 QKAS 365
>gi|159036572|ref|YP_001535825.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
gi|189040003|sp|A8M3R1.1|RF2_SALAI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157915407|gb|ABV96834.1| peptide chain release factor 2 [Salinispora arenicola CNS-205]
Length = 373
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 241/375 (64%), Gaps = 7/375 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF KD++ +E + + +L + A LE A+ WD++A AQ+ L+
Sbjct: 5 DFAEQLKDLDTTLRNIESV---LDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSY 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +I LTD ++++DD +++L E +D G+L E A+ I L K++D+ E+ LLS
Sbjct: 62 VNGEITKLTDLRSRLDDTQVLLELAEA--ESDPGVLTEVAAEITGLAKSIDEMEVRTLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA
Sbjct: 120 GEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ + IPE ++
Sbjct: 180 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIDIPENEM 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
R+ G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L+A+LL
Sbjct: 239 RTDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ ++++ ++ DA + WG Q+R+YV HPY++VKD+RT ET SV DGEL+ FI+
Sbjct: 299 RQEEQAKLQGLKTDAAGS-WGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIE 357
Query: 363 SYLKYKYSMSLSASD 377
+ ++++ LS +
Sbjct: 358 AGIRWRKQQQLSGDN 372
>gi|307689287|ref|ZP_07631733.1| peptide chain release factor 2 [Clostridium cellulovorans 743B]
Length = 329
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 214/323 (66%), Gaps = 3/323 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FWDN AQ +KD+I+L +F++ ++D ++++ ++ D+ L+ E
Sbjct: 3 ESGFWDNLERAQSVTARAKGIKDRIDLYNNFQSSVEDIKVLIEMA--IEENDSSLVTEVY 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+ I L+ +++ L +LSG YD A++++ +G GGTDA DW +MLLRMY RW EK+
Sbjct: 61 NEISTLSDSVENLRLELMLSGEYDTNNAIVTLHSGVGGTDAMDWTEMLLRMYTRWCEKKA 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++ +G+EAGIKSA ++V G YAYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 121 FNVETLDLQVGDEAGIKSATLKVTGLYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV P L ++ +V+I DL++ RA G GGQ+VNK E+A+RITHIPTG+ V+C ERS
Sbjct: 181 EVTPELRQDQ-NVEINPSDLKVDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q+ N+ AL+ LK+KL+ + E +I+ + GD WG QIR+YVFHPY +VKD RT
Sbjct: 240 QIQNRETALNMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYTMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
+ +D+ VMDGEL+ FIK YL
Sbjct: 300 NIQVNDVYKVMDGELDVFIKGYL 322
>gi|366164665|ref|ZP_09464420.1| peptide chain release factor 2 [Acetivibrio cellulolyticus CD2]
Length = 340
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 3/343 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+ ++ ELE KA++ FW++ +Q+ LQ + +K+K+ + +DA T+ +L E
Sbjct: 1 MSNDIEELEQKASEPDFWNDIENSQKVLQKIKTMKEKLERYNRLTQEWEDAKTLCELGLE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D D + E K+ K ++ L LL GPYDK A++++ AGAGGT+AQDW M
Sbjct: 61 ED--DESVFTEVEDSFKKFKKDFEELRLETLLIGPYDKNNAILTLHAGAGGTEAQDWVQM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRM+ RWGE + + R+++ GEEAGIKS I V G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMFTRWGESKGFTVRILDYLDGEEAGIKSVTINVIGENAYGYLKSEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+A G R TSF+ +VMP L ++ ++V I +DL I RA G GGQ++NK E+A+RITHI
Sbjct: 179 DASGRRHTSFASCDVMPELSDD-VEVNINPDDLRIDTYRASGAGGQHINKTESAIRITHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTGV V C ERSQ NK A+ LK+KLL I E ++ +I+ ++G + WG QIR+Y
Sbjct: 238 PTGVVVACQTERSQFQNKDTAMRMLKSKLLEIKEREQKEKIEDLKGIQMDIAWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
VF PY LVKD RT +E ++ +VMDG+L+ FI SYL + S S
Sbjct: 298 VFCPYTLVKDHRTNYEQINVDNVMDGDLDGFINSYLVFSNSES 340
>gi|379012633|ref|YP_005270445.1| peptide chain release factor 2 [Acetobacterium woodii DSM 1030]
gi|375303422|gb|AFA49556.1| peptide chain release factor 2 [Acetobacterium woodii DSM 1030]
Length = 337
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/340 (45%), Positives = 225/340 (66%), Gaps = 6/340 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L KE+ ELE K D FW+++ AQ L+ L K K++ + +DD + +++L
Sbjct: 1 MARLVKEIDELEKKTEDPEFWNDQKSAQIVLKELKITKIKVDHYNELAEALDDIMVMLEL 60
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE ++E ++ IKEL+ LD F + LLSG YD A+IS+ GAGGT++QDW
Sbjct: 61 AEE-----GEIVEGFSAAIKELDVNLDNFRIETLLSGEYDSNNAIISLHPGAGGTESQDW 115
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY RW EK++YK + ++ G+ AGIKS + +EG AYGYL E+G HR+VR
Sbjct: 116 AEMLLRMYTRWAEKKKYKVKTLDLQPGDVAGIKSVTLLIEGINAYGYLKTERGVHRLVRI 175
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ +VMP + +ES++++I ED+ I R+ G GGQ+VN ++A+RI
Sbjct: 176 SPFDSSGRRHTSFASLDVMPEV-DESVEIEILPEDIRIDTFRSSGAGGQHVNTTDSAIRI 234
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+ TG+ V+C ERSQ NK A+ LK KL+ I E+++ I+ I+GD + WG QI
Sbjct: 235 THLKTGIVVQCQNERSQHQNKEVAMGMLKGKLVEIMEQEKMDHIEDIKGDYSQIAWGSQI 294
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
R+YVFHPY +VKD RT E ++ SVMDG+L+ F+ +YL
Sbjct: 295 RSYVFHPYTMVKDHRTNVEVGNVASVMDGDLDGFMNAYLN 334
>gi|399887171|ref|ZP_10773048.1| peptide chain release factor 2 [Clostridium arbusti SL206]
Length = 326
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/322 (47%), Positives = 213/322 (66%), Gaps = 3/322 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQE Q +KD++ L + +++DA ++++ +E + D +L+E S I
Sbjct: 6 FWDDMKKAQEITQKSKGLKDRVELFNALEERLEDAKILIQMCQEEE--DENILDEIVSEI 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
L ++D F + LL+G YD+ A++ + GAGGTDAQDW +MLLRMY RW E +++K
Sbjct: 64 NNLKVSIDTFRVEILLAGQYDRNNAILDLHTGAGGTDAQDWTEMLLRMYTRWSESKKFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS +++ G +AYGYL EKG HR+VR SPFNA G RQTSF+ EV+
Sbjct: 124 ETLDLLPGDEAGIKSVTLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVEVL 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L E+ D+ I +DL I RA G GGQ+VNK E+A+RITHIPTG+ V+C ERSQ +
Sbjct: 184 PELT-ENQDIDIKSDDLRIDTYRASGAGGQHVNKTESAIRITHIPTGIVVQCQNERSQHS 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ LKAKL+ + E I+ + G+ +G QIR+YVF PY +VKD RTG E
Sbjct: 243 NKESAMVMLKAKLVELKERAHKERIEDLTGELKDNGFGSQIRSYVFQPYTMVKDHRTGVE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKY 367
T I SVMDG+++ FI YLK+
Sbjct: 303 TGSIDSVMDGDIDNFITEYLKH 324
>gi|294786673|ref|ZP_06751927.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
gi|420237326|ref|ZP_14741797.1| peptide chain release factor 2 [Parascardovia denticolens IPLA
20019]
gi|294485506|gb|EFG33140.1| peptide chain release factor 2 [Parascardovia denticolens F0305]
gi|391879597|gb|EIT88103.1| peptide chain release factor 2 [Parascardovia denticolens IPLA
20019]
Length = 377
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 158/366 (43%), Positives = 240/366 (65%), Gaps = 6/366 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + E I + GL L ++AELE +A+ WD+ AQ L+ +
Sbjct: 4 YDFTQDLGEARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ LT+ ++DD T+ L E + D+ +EA S +K+L+K L E+ LL G
Sbjct: 64 AEYKRLTEAGQRLDDIDTLYSLGMEEEDEDSK--QEAWSELKKLSKDLSDIEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD AV++I +GAGG DA DWA ML+RMY+RW E+ +YK +V++ S EEAGIKSA
Sbjct: 122 YDNRAAVVTIRSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFR 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLL-PEESMDVQIPEEDLE 243
V+ YAYG LS E GTHR+VR SPF+ RQTSF+ EV+PL+ P + +DV P+ D+
Sbjct: 182 VDAPYAYGKLSVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDV--PDSDVR 239
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ + G GGQ VN +AVR+TH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ +
Sbjct: 240 VDTYMSHGPGGQGVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQ 299
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
E+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETSD +V DG+++ FI +
Sbjct: 300 EEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDA 358
Query: 364 YLKYKY 369
+++++
Sbjct: 359 GIRWRH 364
>gi|225572941|ref|ZP_03781696.1| hypothetical protein RUMHYD_01132 [Blautia hydrogenotrophica DSM
10507]
gi|225039699|gb|EEG49945.1| peptide chain release factor 2 [Blautia hydrogenotrophica DSM
10507]
Length = 348
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/347 (44%), Positives = 224/347 (64%), Gaps = 6/347 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
EK + ELE + FWD+ E+Q+ ++ L +KD + + +T+M+D T++++ E
Sbjct: 5 EKRIEELEREMEAPDFWDDAEESQKKMKELKYMKDDLQTYENLRTQMEDMETLIEMGYE- 63
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L+ E ++ E K+ D + LLSG YD A++++ AGAGGT++ DWA ML
Sbjct: 64 -ENDPDLIPEIQEMLDEFQKSFDDIRVKTLLSGEYDSNDAIVTLHAGAGGTESCDWASML 122
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
RMY RW +K+ + V++ G+EAGIKS EV G AYGYL EKG HR+VR SPFN
Sbjct: 123 YRMYTRWADKKGFSLEVLDYLDGDEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFN 182
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A G RQTSF +VMP + EE +DV+I ++D+ + R+ G GGQ++NK +A+RITH+P
Sbjct: 183 AAGKRQTSFVSCDVMPDI-EEDVDVEIRDDDIRVDTYRSSGAGGQHINKTSSAIRITHLP 241
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V+C ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ + WG QIR+YV
Sbjct: 242 TGIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQENEEKLSGIRGEVTEIGWGNQIRSYV 301
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
PY +VKD RT ET ++ SVMDG ++ FI +YLK+ ++LS D
Sbjct: 302 MQPYTMVKDHRTSEETGNVDSVMDGNIDLFINAYLKW---IALSKKD 345
>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
JGS1721]
gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
JGS1721]
Length = 323
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 213/323 (65%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY RW EK+
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKE 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NFETSNVNGVMDGDIDNFIIAYL 321
>gi|406980870|gb|EKE02424.1| hypothetical protein ACD_20C00391G0018 [uncultured bacterium]
Length = 309
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/304 (49%), Positives = 211/304 (69%), Gaps = 2/304 (0%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K+ +N ++ T ++D ++ L +E D+ L E +I+ +L+ LD++EL ++L
Sbjct: 1 MKNTLNQYNNWSTHVEDIGVLIDLADE--ENDSSLYGEIEAIMLQLDTELDKWELQKMLG 58
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G +D A++++ AGAGGTDAQDWA MLLRMY+RW E + +K ++ S GEEAGIKSA
Sbjct: 59 GEFDTNDAILTVNAGAGGTDAQDWAQMLLRMYIRWSESRGWKVDTLDISEGEEAGIKSAT 118
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
I++ G+YAYGY EKG HR+VR SPFNA RQTSF+ EV P++P V I E++
Sbjct: 119 IKITGKYAYGYAKAEKGVHRLVRISPFNANAKRQTSFASLEVSPVMPGIESKVDIRPEEI 178
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
E+ RAGG GGQNVNKVETAVRI H P+G+ V+C +ERSQ NK A+ L +KLL I
Sbjct: 179 EVETMRAGGAGGQNVNKVETAVRIVHKPSGIVVKCQQERSQAQNKELAMQLLASKLLAIK 238
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ Q ++ QI+G A+ +G QIR+YVFHPY +VKD RT +ET ++ +VM+GEL+ FI+
Sbjct: 239 QAQHEDKMAQIKGAAMDINFGNQIRSYVFHPYSMVKDHRTNYETGNVEAVMNGELDSFIE 298
Query: 363 SYLK 366
+YL+
Sbjct: 299 AYLR 302
>gi|16080582|ref|NP_391409.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. 168]
gi|402777692|ref|YP_006631636.1| peptide chain release factor 2 [Bacillus subtilis QB928]
gi|430756690|ref|YP_007207969.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|6174964|sp|P28367.2|RF2_BACSU RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2331287|gb|AAC97534.1| release factor 2 [Bacillus subtilis]
gi|2618874|gb|AAC67303.1| putative peptide chain release factor RF-2 [Bacillus subtilis]
gi|2636055|emb|CAB15546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. 168]
gi|402482871|gb|AFQ59380.1| Peptide chain release factor 2 [Bacillus subtilis QB928]
gi|430021210|gb|AGA21816.1| Peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 366
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 228/364 (62%), Gaps = 3/364 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + R+ + R S L+ E +AEL+ + AD FW+++ +AQ + +KD
Sbjct: 6 IRAELENMASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDY 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N ++ L +E TD L E +K L K ++FEL LLS PYD
Sbjct: 66 VNSYKKLNESHEELQMTHDLLKEEPDTDLQL--ELEKELKSLTKEFNEFELQLLLSEPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RWGE++ +K ++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF EVMP +E +D+ I ED+++
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDE-IDIDIRTEDIKVDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VN ++AVRITH+PT V V C ERSQ+ N+ +A+ LKAKL E++
Sbjct: 243 YRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQ 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ +IRG+ + WG QIR+YVFHPY +VKD RT E ++ +VMDG+++ FI +YL+
Sbjct: 303 QAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLR 362
Query: 367 YKYS 370
K S
Sbjct: 363 SKLS 366
>gi|217962667|ref|YP_002341241.1| peptide chain release factor 2 [Bacillus cereus AH187]
Length = 380
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGSFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E ++++I EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEIRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|315226283|ref|ZP_07868071.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
10105 = JCM 12538]
gi|315120415|gb|EFT83547.1| peptide chain release factor RF2 [Parascardovia denticolens DSM
10105 = JCM 12538]
Length = 396
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 158/366 (43%), Positives = 240/366 (65%), Gaps = 6/366 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + E I + GL L ++AELE +A+ WD+ AQ L+ +
Sbjct: 23 YDFTQDLGEARSKYETITQAVGLDSLRGKIAELEKQASAPGLWDDPETAQRVTSNLSASQ 82
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ LT+ ++DD T+ L E + D+ +EA S +K+L+K L E+ LL G
Sbjct: 83 AEYKRLTEAGQRLDDIDTLYSLGMEEEDEDSK--QEAWSELKKLSKDLSDIEIQTLLDGE 140
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD AV++I +GAGG DA DWA ML+RMY+RW E+ +YK +V++ S EEAGIKSA
Sbjct: 141 YDNRAAVVTIRSGAGGVDAADWAQMLMRMYIRWAERHQYKVQVIDTSYAEEAGIKSATFR 200
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLL-PEESMDVQIPEEDLE 243
V+ YAYG LS E GTHR+VR SPF+ RQTSF+ EV+PL+ P + +DV P+ D+
Sbjct: 201 VDAPYAYGKLSVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHIDV--PDSDVR 258
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ + G GGQ VN +AVR+TH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ +
Sbjct: 259 VDTYMSHGPGGQGVNTTYSAVRLTHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLKQ 318
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
E+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETSD +V DG+++ FI +
Sbjct: 319 EEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQAVFDGDIDGFIDA 377
Query: 364 YLKYKY 369
+++++
Sbjct: 378 GIRWRH 383
>gi|283777745|ref|ZP_06344221.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus NVH0597-99]
gi|283645392|gb|EFC27417.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus NVH0597-99]
Length = 380
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E ++++I EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEIRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|20807024|ref|NP_622195.1| protein chain release factor B [Thermoanaerobacter tengcongensis
MB4]
gi|20515510|gb|AAM23799.1| Protein chain release factor B [Thermoanaerobacter tengcongensis
MB4]
Length = 347
Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 233/342 (68%), Gaps = 3/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ ++KE+ ++E + +D SFW + ++QE + +K+ + ++ +D T+++L
Sbjct: 6 VEGIKKEIEDIEKQMSDPSFWSDLKKSQELSKKQKALKELLEEYESLLSRCEDLYTLIEL 65
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
++ D + EE KEL K ++ ++ LLSGPYDK A++SI AG+GGT+AQDW
Sbjct: 66 G--LEEGDESIAEEVEREYKELKKEVENLKIRTLLSGPYDKNNAILSIHAGSGGTEAQDW 123
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY RW + ++ +++ GEEAGIKSA + ++G +AYGYL GE G HR+VR
Sbjct: 124 AEMLLRMYTRWANDKGFEVEILDYLEGEEAGIKSATLLIKGPFAYGYLKGEAGVHRLVRI 183
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+A G R TSF+ EV+P L E+ ++++I EDL+I RA G GGQ+VNK E+AVRI
Sbjct: 184 SPFDAAGRRHTSFALVEVIPEL-EDDIEIEIRPEDLKIDTFRASGAGGQHVNKTESAVRI 242
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V C ERSQ+ N+ A+ LKAKLL + ++R +I+ ++G+ +A WG QI
Sbjct: 243 THLPTGIVVSCQNERSQIQNRETAMKMLKAKLLDLMMKERKEKIEDLKGEHREAAWGNQI 302
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVF PY LVKD RT +E ++ +VMDGE++ FI +YLK K
Sbjct: 303 RSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGFINAYLKQK 344
>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
Length = 323
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 213/323 (65%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---QEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY RW EK+
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NFETSNVNGVMDGDIDNFIIAYL 321
>gi|227529549|ref|ZP_03959598.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
49540]
gi|227350508|gb|EEJ40799.1| peptide chain release factor RF2 [Lactobacillus vaginalis ATCC
49540]
Length = 356
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 226/353 (64%), Gaps = 6/353 (1%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+ AS GL L++ +AE E K A+ FWD+ AQ+ + A ++KDK + + +
Sbjct: 2 LPASGGLFDLDALDESIAENEQKMAEPGFWDDNVAAQKVINANNELKDKRDTFVKLRDNI 61
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+ T ++L E D L E E K L+Q+ L QLL G YD + A++ I G
Sbjct: 62 GNLQTSIELLEL--EPDDELQSEFEKSFGETQKELEQYRLNQLLDGEYDAKNAILEIHPG 119
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDW MLLRMYVRWGE+ + GEEAGIKS + ++G A+GYL E
Sbjct: 120 AGGTEAQDWGAMLLRMYVRWGEQHGFNVETASYEAGEEAGIKSVTLLIKGHNAFGYLRSE 179
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
KG HR+VR SPF+A G R TSF+ +VMP L +ES+++ I DL + R+ G GGQ++
Sbjct: 180 KGVHRLVRISPFDAAGRRHTSFASVDVMPEL-DESVNIDIDPSDLRVDTFRSSGAGGQHI 238
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK E+AVRITHIPTG+ ERSQL N++ A++ LK+KL + EE++A + +I G+
Sbjct: 239 NKTESAVRITHIPTGIVTSSQAERSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQ 298
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
++ WG QIR+YVFHPY LVKD R+GHET + +VMDG+L+PFI +YL++K S
Sbjct: 299 LEIGWGSQIRSYVFHPYTLVKDNRSGHETHNGQAVMDGDLDPFINAYLQWKLS 351
>gi|402833858|ref|ZP_10882467.1| peptide chain release factor 2 [Selenomonas sp. CM52]
gi|402279588|gb|EJU28372.1| peptide chain release factor 2 [Selenomonas sp. CM52]
Length = 371
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 225/338 (66%), Gaps = 3/338 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++AELE K + +FWDN EAQ+ Q L +K ++ + +K DDA ++++ +
Sbjct: 32 EEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMA--L 89
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
+ D L E + + + A+ + EL LLSGPYD A++++ AGAGGT+AQDW ML
Sbjct: 90 EENDTSLEPEVQAEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQML 149
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY RW E+ + + G+EAG+KSA + + G AYGYL EKG HR+VR SPF+
Sbjct: 150 LRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFD 209
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
+ R TSFS ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+P
Sbjct: 210 SNARRHTSFSACDIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMP 268
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V+C ERSQL N+ + + L+AKL + +E++ +EI+++ GD K EWG QIR+YV
Sbjct: 269 TGIVVQCQNERSQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYV 328
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
F PY +VKD+RTG ET ++ +VMDG+L+ FI+++L K
Sbjct: 329 FQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAFLAAK 366
>gi|182419781|ref|ZP_02951021.1| peptide chain release factor 2 [Clostridium butyricum 5521]
gi|237666525|ref|ZP_04526510.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
E BL5262]
gi|182376329|gb|EDT73911.1| peptide chain release factor 2 [Clostridium butyricum 5521]
gi|237657724|gb|EEP55279.1| peptide chain release factor 2 [Clostridium butyricum E4 str. BoNT
E BL5262]
Length = 347
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 215/337 (63%), Gaps = 4/337 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
LEKEL ELE K + FWD+ +A+E + +KDKI K+++DD + + EE
Sbjct: 12 LEKELHELECKMQEPGFWDDSKKAEEVTKKSKLIKDKIENYDKLKSQLDDIDVLKDIMEE 71
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D A E IK + ++ + + LLSG YDK A++++ G GGTDA DW +M
Sbjct: 72 DDIESAN---EIIQTIKSIEHEIEDYNMKILLSGEYDKNNAIVTLHVGVGGTDANDWTEM 128
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW E + Y ++ G+EAGIKS ++V G Y YGYL EKG HR+VR SP+
Sbjct: 129 LLRMYTRWCENKGYSVETIDLIAGDEAGIKSVTLKVTGEYVYGYLKAEKGIHRLVRISPY 188
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
NA G RQTSF+ EV+P L +E D+ I +DL++ R+ G GGQ++NK ++AVRITHI
Sbjct: 189 NANGKRQTSFASMEVLPELTKEQ-DITIRPDDLKVDTYRSSGSGGQHINKTDSAVRITHI 247
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+Y
Sbjct: 248 PTGIVVQCQNERSQFSNRETAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSY 307
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT ETS++ VMDG+++ FI ++LK
Sbjct: 308 VFHPYSMVKDHRTNVETSNVNGVMDGDIDLFINAFLK 344
>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
3626]
gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
3626]
Length = 323
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 214/323 (66%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY+RW EK+
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYL 321
>gi|267847202|gb|ACJ79637.2| peptide chain release factor 2, programmed frameshift [Bacillus
cereus AH187]
Length = 380
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLYLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGSFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E ++++I EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEIRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|194699680|gb|ACF83924.1| unknown [Zea mays]
Length = 174
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 145/162 (89%), Positives = 155/162 (95%)
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
+TQLLSGPYDKEGAVI+I+AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKS GEEA
Sbjct: 1 MTQLLSGPYDKEGAVINISAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSPGEEA 60
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKSA +E+EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF+G EVMPLLPEESM V
Sbjct: 61 GIKSATVELEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFAGVEVMPLLPEESMAVD 120
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
IPEEDLEISF+RAGGKGGQNVNKVETAVR+ HIPTG+ VRC+
Sbjct: 121 IPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCS 162
>gi|350268702|ref|YP_004880010.1| peptide chain release factor 2 [Oscillibacter valericigenes
Sjm18-20]
gi|348593544|dbj|BAK97504.1| peptide chain release factor 2 [Oscillibacter valericigenes
Sjm18-20]
Length = 374
Score = 313 bits (803), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 156/353 (44%), Positives = 225/353 (63%), Gaps = 3/353 (0%)
Query: 13 AASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTD 72
A +E++ A+ + +KE A LE + + FW++ +Q+ Q L ++ KI
Sbjct: 15 ALGPELEKLAAALDIDTAKKEAAMLEAQTGEPEFWNDLERSQQVQQKLKRLQGKIGRQEK 74
Query: 73 FKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVI 132
+ +D T+ ++ +E D D LL+E +L + + + L+ LLSG YD A++
Sbjct: 75 MVSNWEDLKTLCEMGQEED--DPSLLDELKEGYDKLEEEISEQRLSTLLSGEYDSSNAIL 132
Query: 133 SITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYG 192
S +GAGGT+AQDW ML RMY RW E+ +K ++++ GEEAGIKSA I +EG AYG
Sbjct: 133 SFHSGAGGTEAQDWTGMLYRMYTRWAERHNFKYQILDYEDGEEAGIKSAAISIEGENAYG 192
Query: 193 YLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGK 252
+L E G HR+VR SPF+A RQTSF+ EVMP LP+++ DV+I ED+E+ R+ G
Sbjct: 193 FLKSENGVHRLVRVSPFDANARRQTSFAALEVMPDLPDDA-DVEIRPEDIEMQVYRSSGA 251
Query: 253 GGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQ 312
GGQ++NK +AVR+ H+PTGV V C ERSQ N+ + L+AKLL + +Q A +I
Sbjct: 252 GGQHINKTSSAVRLIHLPTGVVVSCQTERSQFQNRDNCMKMLRAKLLELKAQQHAEKISD 311
Query: 313 IRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
I+G +K EWG QIR+YVF PY L KD RTG+ETS+I +VMDG+++ FI +YL
Sbjct: 312 IKGVQMKIEWGSQIRSYVFMPYTLAKDTRTGYETSNINAVMDGDIDGFINAYL 364
>gi|218906362|ref|YP_002454196.1| peptide chain release factor 2 [Bacillus cereus AH820]
gi|218540032|gb|ACK92430.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus AH820]
Length = 380
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|313884513|ref|ZP_07818274.1| peptide chain release factor 2 [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620297|gb|EFR31725.1| peptide chain release factor 2 [Eremococcus coleocola
ACS-139-V-Col8]
Length = 341
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 226/339 (66%), Gaps = 3/339 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A+ E + FWD+ +AQ+ + L + K + D +++DD ++L EE
Sbjct: 1 MEEDIADYEHQMLAPDFWDDNDKAQKVISQLNEAKASYQTIQDLVSQVDDLGMALELYEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
S D +L EA I+ +KAL+ +EL LLSGP+D A++ I GAGGT++QDW M
Sbjct: 61 --SQDLDMLSEAEDIMTVTSKALNNYELQLLLSGPHDSANAILEIHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW +KQ ++ V++ G+EAGIKS +E++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWADKQGFQVEVLDYQAGDEAGIKSVTLEIKGHNAYGYLKSEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EV P + ++S++++I +D+ + RA G GGQ++NK +AVRITHI
Sbjct: 179 DSNARRHTSFASIEVTPEM-DDSIEIEINPDDIRVDTYRASGAGGQHINKTSSAVRITHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ + +RSQ N+ +A++ LKAKL EE+RA E+ I+G ++ WG QIR+Y
Sbjct: 238 PTGIVTQSQAQRSQFQNRDQAMAMLKAKLYQREEEERAKEMAAIKGQQLEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VFHPY +VKD RTG+E + +V+DG+L+ F+ +YLK++
Sbjct: 298 VFHPYSMVKDHRTGYEVGNSQAVIDGDLDGFMDAYLKWQ 336
>gi|42784339|ref|NP_981586.1| peptide chain release factor 2 [Bacillus cereus ATCC 10987]
gi|42740270|gb|AAS44194.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus ATCC 10987]
Length = 380
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|438001839|ref|YP_007271582.1| Peptide chain release factor 2; programmed frameshift-containing
[Tepidanaerobacter acetatoxydans Re1]
gi|432178633|emb|CCP25606.1| Peptide chain release factor 2; programmed frameshift-containing
[Tepidanaerobacter acetatoxydans Re1]
Length = 316
Score = 313 bits (802), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 158/314 (50%), Positives = 212/314 (67%), Gaps = 3/314 (0%)
Query: 53 AQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKAL 112
AQ+TLQ L D+K+K + T + K DD +T+++L E D D L E + +K+ K L
Sbjct: 2 AQKTLQRLNDLKEKFDNFTLLEKKYDDLLTLIELCTETD--DEELRTELLNEMKDFKKQL 59
Query: 113 DQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSL 172
++ +L LLSG YD A++++ AGAGGT+AQDW MLLRMY RW E + YK +++
Sbjct: 60 EKMKLQTLLSGKYDGRNAILTLHAGAGGTEAQDWVSMLLRMYTRWAEDKGYKVSILDMLP 119
Query: 173 GEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEES 232
G+EAGIKSA + VEG AYGYL EKG HR+VR SPF+A G R TSF+ +VMP + ++
Sbjct: 120 GDEAGIKSAAVLVEGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASVDVMPEIDDDI 179
Query: 233 MDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALS 292
PE DL+I R+GG GGQ+VNK E+AVRITHIPTG V C ERSQ +N+ A+
Sbjct: 180 EIDIKPE-DLKIDTFRSGGAGGQHVNKTESAVRITHIPTGTVVSCQNERSQQSNRNTAMK 238
Query: 293 RLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSV 352
L+AKL I +E++ E+ +IRG + WG QIR+Y+FHPY LVKD RT E ++ +V
Sbjct: 239 ILRAKLFDIYQEEQQKELDKIRGSQKEIAWGSQIRSYIFHPYSLVKDHRTDVEVGNVQAV 298
Query: 353 MDGELEPFIKSYLK 366
MDGEL+ FI +YLK
Sbjct: 299 MDGELDEFINAYLK 312
>gi|295697362|ref|YP_003590600.1| hypothetical protein [Kyrpidia tusciae DSM 2912]
gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Kyrpidia tusciae DSM 2912]
Length = 382
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/372 (41%), Positives = 238/372 (63%), Gaps = 3/372 (0%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q F LR+ + +R++EI S L +K++A +E + A + FWD++ AQ+ + +
Sbjct: 3 QTFGELRQALHDLVERLDEIGRSLDLAGKKKQIAGMEQRMAAADFWDDQEGAQKVIAEVN 62
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+KD + + +++++D + +L E D +L E + I +++ L QFEL +L
Sbjct: 63 RLKDVVERVEGLRSRVEDLEVLWELGHE--EGDETVLGEIEAGITQVHSQLGQFELELML 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
SGPYD+ A++ + GAGGT++QDW MLLRMY RW E + YK ++ GEEAG+KS
Sbjct: 121 SGPYDRNNAIVELHPGAGGTESQDWTAMLLRMYTRWAESRGYKVETLDYLPGEEAGVKSV 180
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
+ ++G AYGYL E+G HR+VR SPF+A G R TSF+ +V+P L +ES+DV I ED
Sbjct: 181 TLLIKGHNAYGYLKAERGVHRLVRISPFDASGRRHTSFASVDVLPEL-DESVDVDIRPED 239
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
L+I R+ G GGQ+VN ++AVRITHIPTG+ V C ERSQ+ N+ A+ L A+L
Sbjct: 240 LKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKNRATAMKILAARLYER 299
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
++ +I +RG+ + WG QIR+YVFHPY +VKD RTG ET ++ +VMDG+++ FI
Sbjct: 300 RRREQEEQIAALRGEQKEIAWGSQIRSYVFHPYSMVKDHRTGVETGNVQAVMDGDIDAFI 359
Query: 362 KSYLKYKYSMSL 373
++L+ + + L
Sbjct: 360 DAWLRQRAAAQL 371
>gi|451817487|ref|YP_007453688.1| peptide chain release factor 2 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783466|gb|AGF54434.1| peptide chain release factor 2 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 323
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 211/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ A+E + +KD+I ++K++D + ++ E+ D A E
Sbjct: 3 EAGFWDDIKRAEEVTKKSKSIKDQIEKFDKLRSKVEDVEVLKEIMEDDDEESAN---EII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
I+E+ +D + + LL G YDK A++++ G GGTDA DW +MLLRMY RW EKQ
Sbjct: 60 QSIREVEAEIDDYNMKILLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAGIKS +++ G YAYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSVETIDLLPGDEAGIKSVTLKITGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASM 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L +E D++I +DL I R+GG GGQ+VNK ++AVRITH+PTG+ V+C ERS
Sbjct: 180 EVLPELTKEQ-DIEIKADDLRIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q AN+ A+ LK+KL+ + E +I+ + GD WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFANRDTAMEMLKSKLVELKERAHKEKIEDLTGDLKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
ETS++ +VMDG+++ FI +YLK
Sbjct: 299 NVETSNVTAVMDGDIDMFINAYLK 322
>gi|302847640|ref|XP_002955354.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
nagariensis]
gi|300259426|gb|EFJ43654.1| hypothetical protein VOLCADRAFT_106758 [Volvox carteri f.
nagariensis]
Length = 242
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/235 (62%), Positives = 185/235 (78%), Gaps = 1/235 (0%)
Query: 145 DWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIV 204
DWA+ML RMY+RW E+Q + R+V+++ GEEAG+KS +EV GRY YGYL EKGTHR+V
Sbjct: 2 DWAEMLERMYLRWAEQQGHGVRLVDRAPGEEAGVKSVELEVAGRYVYGYLRAEKGTHRLV 61
Query: 205 RQSPFNAKGLRQTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
R SPFNAKGLRQTSF+G +VMP+L P + D+ + E DLE S R+GGKGGQNVNKVET
Sbjct: 62 RNSPFNAKGLRQTSFAGVDVMPVLGPGDLPDLDLNERDLEFSTMRSGGKGGQNVNKVETG 121
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VRI H+PTG++V+CT+ERSQ N+ A+ LK++LLV+ EEQ A + +IRGD VKAEWG
Sbjct: 122 VRIVHLPTGISVKCTQERSQSQNREIAMDILKSRLLVVLEEQNARRVAEIRGDLVKAEWG 181
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
QQIRNYVFHPYKLVKD RTG ETSD+ +V+DG+L F+ +YL+ K ++ AS A
Sbjct: 182 QQIRNYVFHPYKLVKDTRTGVETSDVAAVLDGDLADFMAAYLRMKGRKAVGASLA 236
>gi|333896506|ref|YP_004470380.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111771|gb|AEF16708.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 365
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 237/355 (66%), Gaps = 3/355 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D ++E+ AS ++ L++E+AE++ K ++ FW++ + QE + D+K+ I+ +
Sbjct: 14 DTIKEMGASLDIEGLKREVAEIDKKMSEPDFWNDLEKFQELSKKQKDLKEIISEYEALEK 73
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ +D T+++L ++ D L +E K L+K ++ ++ LLSGPYDK A++SI
Sbjct: 74 QWEDLHTLIELG--LEEGDESLSQEVHEEYKALSKKINDMKIKTLLSGPYDKNNAILSIH 131
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGGT+AQDW +MLLRMY+RW + Y V+ G++AG+KS I V+G +AYGYL
Sbjct: 132 AGAGGTEAQDWTEMLLRMYMRWASSKNYDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLK 191
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
E G HR+VR SPF+A G R TSF+ EV+P + ++ + V I EDL+I R+ G GGQ
Sbjct: 192 SEAGVHRLVRISPFDAAGRRHTSFALVEVLPEI-DDDIKVDIRPEDLKIDTYRSSGAGGQ 250
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+A+RITHIPTG+ V+C ERSQ+ N+ A+ LKAKL+ + +++ +I+ ++G
Sbjct: 251 HVNKTESAIRITHIPTGIIVQCQTERSQMQNRETAMKMLKAKLMDMMIKEQKEKIEDLKG 310
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+ +A WG QIR+YVF PY LVKD RT E ++ +VMDGE++ FI +YLK K S
Sbjct: 311 EHKEAGWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGEIDDFINAYLKQKVS 365
>gi|218900306|ref|YP_002448717.1| peptide chain release factor 2 [Bacillus cereus G9842]
gi|218544557|gb|ACK96951.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus G9842]
Length = 380
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMSAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGSFR-QLDETFENLEVTHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +++ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|227817946|ref|YP_002817955.1| peptide chain release factor 2 [Bacillus anthracis str. CDC 684]
gi|229604792|ref|YP_002869406.1| peptide chain release factor 2 [Bacillus anthracis str. A0248]
gi|386739041|ref|YP_006212222.1| Peptide chain release factor 2 [Bacillus anthracis str. H9401]
gi|227003828|gb|ACP13571.1| peptide chain release factor 2, programmed frameshift [Bacillus
anthracis str. CDC 684]
gi|229269200|gb|ACQ50837.1| peptide chain release factor 2, programmed [Bacillus anthracis str.
A0248]
gi|384388893|gb|AFH86554.1| Peptide chain release factor 2 [Bacillus anthracis str. H9401]
Length = 380
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
Length = 368
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 229/361 (63%), Gaps = 3/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
N+++D+ + R++E+R S L + +A E K FWD+ +AQ + L +K
Sbjct: 5 NVKQDLREVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ +D T+++L +E +D L E I LN+ ++ FEL LL+ PY
Sbjct: 65 VVEHYERLNADCEDLQTLIELADE--ESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
DK A++ + GAGGT++QDWA ML RMY RW EK+ +K V++ G+EAGIKS I V
Sbjct: 123 DKLNAILELHPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYGYL EKG HR+VR SPF++ G R TSF +V+P + E+ ++V+I EDL++
Sbjct: 183 KGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITED-IEVEIRTEDLKVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ+VNK E+A+RITHIPTG+ V C +ERSQ+ N+ +A++ L++KL E+
Sbjct: 242 TYRASGAGGQHVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ + +IRG+ WG QIR+YVFHPY +VKD RT ET ++ +VMDG+L+ FI YL
Sbjct: 302 QQKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYL 361
Query: 366 K 366
+
Sbjct: 362 R 362
>gi|429317614|emb|CCP37402.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN034156]
gi|429318507|emb|CBW32341.2| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
gi|429319156|emb|CCP32395.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN034183]
gi|429320971|emb|CCP34369.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN994039]
gi|429322791|emb|CCP30410.1| peptide chain release factor 2 [Streptococcus pneumoniae SPN994038]
Length = 364
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 237/368 (64%), Gaps = 5/368 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ ++A +++ R S L+ LE+E+A LE K + FW++ AQ+T Q L +
Sbjct: 2 DISVIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K+ N + D+ ++ E D + +E + + EL+K + +E+T LLS
Sbjct: 62 LKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQLAELDKIMTSYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K V++ G+EAGIKS
Sbjct: 118 EPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ EG AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V+I E+D+
Sbjct: 178 LSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVEIREDDI 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ +A+ L+AKL +
Sbjct: 237 KMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQME 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E + + VMDG+L+ FI
Sbjct: 297 QEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFID 356
Query: 363 SYLKYKYS 370
+YLK++ S
Sbjct: 357 AYLKWRIS 364
>gi|365843352|ref|ZP_09384285.1| peptide chain release factor 2 [Flavonifractor plautii ATCC 29863]
gi|373120827|ref|ZP_09534864.1| peptide chain release factor 2 [Lachnospiraceae bacterium
7_1_58FAA]
gi|364572159|gb|EHM49720.1| peptide chain release factor 2 [Flavonifractor plautii ATCC 29863]
gi|371655614|gb|EHO20956.1| peptide chain release factor 2 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 373
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 228/349 (65%), Gaps = 3/349 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ + GL+ +E+ LE ++A FWDN +AQ+ Q + ++DKI KT+
Sbjct: 18 LDELDQALGLETAIREVEMLESESASDGFWDNLEKAQKVQQRVKQLRDKIEGQQKRKTQW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +T+ +L E + D L+ E +L +++ +L+ LL+G YD A+++ AG
Sbjct: 78 DDLMTLCELGNE--AEDETLVPEVEEGFAKLEAEIEEAKLSTLLTGEYDGSNAILTFHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDWA ML RMY RW E+ Y + ++ G+EAG+KSA I +EG AYG+L E
Sbjct: 136 AGGTEAQDWAQMLFRMYTRWAERHGYVCKTLDYLDGDEAGLKSATISIEGENAYGHLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPF+A RQTSF+ EVMP +P++ ++V I ED+E+ R+ G GGQ++
Sbjct: 196 HGVHRLVRVSPFDANARRQTSFAALEVMPEIPDD-VEVDIRPEDVEMQVFRSSGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVR+ H PTG+ V C ERSQ N+ + L++KL+ + + A +I I+G
Sbjct: 255 NKTSSAVRLIHKPTGIVVSCQTERSQFQNRDTCMRMLRSKLVELQMQAHAEKISDIKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+K EWG QIR+YVF PY+LVKD RTG+ETS+I +VMDGEL+ FI +YLK
Sbjct: 315 LKIEWGSQIRSYVFMPYQLVKDNRTGYETSNINAVMDGELDGFINAYLK 363
>gi|118444993|ref|YP_878978.1| peptide chain release factor 2 [Clostridium novyi NT]
gi|118135449|gb|ABK62493.1| peptide chain release factor 2 [Clostridium novyi NT]
Length = 337
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/339 (47%), Positives = 228/339 (67%), Gaps = 7/339 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD--AVTIVKLT 87
+EK L ELE K +S FWD+ +AQE Q +KD+I+ KT+++D + + +
Sbjct: 1 MEKRLGELEHKMQESDFWDDINKAQEITQEAKGIKDRIDGYNSTKTRIEDLEVLIEMSIE 60
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE +S+ +L E ++E+ +D F++ LLSG YDK A++++ +GAGGTDAQDW
Sbjct: 61 EEDESSIEEILNE----VEEIESIIDNFKVEILLSGEYDKNNAIVTLHSGAGGTDAQDWT 116
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+MLLRMY RW EK+ YK V++ G+EAGIKSA +++ G +AYGYL EKG HR+VR S
Sbjct: 117 EMLLRMYTRWAEKRGYKVDVLDILPGDEAGIKSANLKITGEFAYGYLKAEKGIHRLVRIS 176
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PFNA G RQTSF+ EV+P L +E+ D++I +DL I RA G GGQ++NK ++AVRIT
Sbjct: 177 PFNANGKRQTSFASLEVIPEL-KENQDIEIKADDLRIDTYRASGAGGQHINKTDSAVRIT 235
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V+ ERSQ NK A+S LK+KL+ + E +I+ + GD + WG QIR
Sbjct: 236 HIPTGIVVQSQSERSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIR 295
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+YVF PY +VKD RT E ++ +VMDG+++ FI YLK
Sbjct: 296 SYVFQPYTMVKDHRTNTEMGNVDAVMDGDIDIFILEYLK 334
>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
JGS1987]
gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
JGS1495]
gi|422346837|ref|ZP_16427751.1| peptide chain release factor 2 [Clostridium perfringens WAL-14572]
gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
JGS1495]
gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
JGS1987]
gi|373225670|gb|EHP48001.1| peptide chain release factor 2 [Clostridium perfringens WAL-14572]
Length = 323
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 213/323 (65%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY RW EK+
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYL 321
>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
Length = 323
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 213/323 (65%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFRNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY RW EK+
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYL 321
>gi|145593537|ref|YP_001157834.1| peptide chain release factor 2 [Salinispora tropica CNB-440]
gi|189040004|sp|A4X3K6.1|RF2_SALTO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|145302874|gb|ABP53456.1| bacterial peptide chain release factor 2 (bRF-2) [Salinispora
tropica CNB-440]
Length = 373
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 242/376 (64%), Gaps = 7/376 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D+ KD++A +E + + +L + A LE A+ WD++A AQ+ L+
Sbjct: 5 DYAEQLKDLDATLRNIESV---LDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSY 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +IN L + ++++DDA +++L E +D G L E + + L KA+D+ E+ LLS
Sbjct: 62 VNGEINKLAELRSRLDDAKVLLELAEA--ESDPGALTEVEAEVAGLAKAIDEMEVRTLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA
Sbjct: 120 GEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ + IPE ++
Sbjct: 180 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIDIPENEM 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
R+ G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L+A+LL
Sbjct: 239 RFDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ ++++ ++ DA + WG Q+R+YV HPY++VKD+RT ET +V DGEL+ FI+
Sbjct: 299 RQEEQAKLQGLKTDAAGS-WGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIE 357
Query: 363 SYLKYKYSMSLSASDA 378
+ ++++ L+ +A
Sbjct: 358 AGIRWRKQQQLADDNA 373
>gi|269850236|gb|ACZ49981.1| peptide chain release factor 2, programmed frameshift [Bacillus
anthracis str. Ames]
Length = 365
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 6 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 65 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 122 YDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 182 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 241 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 301 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 360
Query: 365 LK 366
L+
Sbjct: 361 LR 362
>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
Length = 377
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 237/376 (63%), Gaps = 6/376 (1%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
F LR +E ++++ + GL E+ ELE KAA FW++ +Q LQ +
Sbjct: 7 FEELRLRLENMRPEIDDLGRALGLDAARAEVRELEEKAAQQDFWNDIENSQSVLQKTRQL 66
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
KDKI + K DD + +++L +E + D +L EAA + + +D L LL+G
Sbjct: 67 KDKIASYEALRRKTDDTLALIELADEEE--DLSVLAEAAEAVDSVRAQIDTMRLATLLTG 124
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD + A+++ AGAGGT+AQDWA+ML RMY RW E+ + +V++ GEEAG+KSA +
Sbjct: 125 EYDAKNAILTFHAGAGGTEAQDWAEMLYRMYTRWAERHGFNVQVLDYLDGEEAGLKSASV 184
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
+EG AYGYL E G HR+VR SPF++ G R TSF+ EVMP + ++S++V I ED++
Sbjct: 185 LIEGLNAYGYLKSEIGVHRLVRVSPFDSSGRRHTSFASVEVMPEI-DDSIEVDIRPEDIK 243
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ R+ G GGQ++NK +AVR+TH+PTG+ V C ERSQ N+ A+ LK+KL+ I E
Sbjct: 244 MDVFRSSGAGGQHINKTSSAVRLTHLPTGIVVSCQNERSQHQNREMAMRMLKSKLVEIKE 303
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+ +I+ I+G + WG QIR+YVF PY LVKD RT E+ +I +VMDG+L+ FI +
Sbjct: 304 REHYDKIEDIKGVQKEIAWGSQIRSYVFMPYTLVKDHRTSFESGNIGAVMDGDLDGFINA 363
Query: 364 YLKYKYSMSLSASDAN 379
YLK ++SL ++N
Sbjct: 364 YLK---AVSLGQVESN 376
>gi|422875084|ref|ZP_16921569.1| peptide chain release factor 2 [Clostridium perfringens F262]
gi|380304079|gb|EIA16372.1| peptide chain release factor 2 [Clostridium perfringens F262]
Length = 323
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 213/323 (65%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY RW EK+
Sbjct: 60 SEVKALSKEIDTLKIEIILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYL 321
>gi|125624350|ref|YP_001032833.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389854712|ref|YP_006356956.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|166223629|sp|A2RLF5.1|RF2_LACLM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|124493158|emb|CAL98122.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071134|gb|ADJ60534.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 365
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 237/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E S+++ R S L +LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYSEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ T +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNTMLEEAQTMLEMLQE--EADEDMQVELEEMTTALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
AV+ I G+GGT++QDW ML+RMY RWGE +K +++ G+ AG+KS I
Sbjct: 124 HMNAVLEIHPGSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFV 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF++ R TSF+ +VMP L ++S++V++ + D+++
Sbjct: 184 GRNAYGFLRGEKGVHRLVRISPFDSANRRHTSFTSVDVMPEL-DDSIEVEVRDADVKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+TH+PTG+ V+ T +R+Q N+ KA++ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD + WG QIR+YVF PY+LVKD RTG+ET I +VMDGE++ FI +YL+
Sbjct: 303 QAEVDELRGDQSEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLR 362
Query: 367 YK 368
+
Sbjct: 363 WN 364
>gi|224552865|gb|ACN55074.1| peptide chain release factor 2, programmed frameshift [Bacillus
anthracis str. 'Ames Ancestor']
Length = 365
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 6 IRQELEKMAKRLAAFRGSLDLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 65 --MVGKFR-QLDETFENLEITHELLKEEYDEDLHEELESEVKGLIQEMNEYELQLLLSDP 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 122 YDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 182 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 241 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 301 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 360
Query: 365 LK 366
L+
Sbjct: 361 LR 362
>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
gi|156869337|gb|EDO62709.1| peptide chain release factor 2 [Clostridium leptum DSM 753]
Length = 374
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 236/360 (65%), Gaps = 3/360 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+++++ + GL+ ++KE+ ELE FWD+ ++Q+ +Q + +K+K++ +
Sbjct: 18 IKDLKEALGLEAMKKEIGELEEAQTSPDFWDDMEKSQKIIQRTSMLKNKVSAYETLVSGY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+DA+T++++ +E D +L +A ++++ K L++ L LL+G YD A+++ AG
Sbjct: 78 EDALTLIEMGDE--EEDLSILPDAQQEVEKVRKELEEQRLATLLTGEYDANNAILTFHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDWA+ML RMY RWGE+ +K + ++ GEEAG+KSAV+ +EG AYGYL E
Sbjct: 136 AGGTEAQDWAEMLYRMYCRWGERHNFKVKTLDYLDGEEAGLKSAVVLIEGLNAYGYLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPF+A G R TSF+ EVMP + E+ ++V+I ED+++ RA G GGQ V
Sbjct: 196 AGVHRLVRVSPFDASGRRHTSFASLEVMPEINED-VEVEIAPEDIKMDVYRASGAGGQKV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVR+THIPTG+ V C ERSQ N+ A+ L +KL+ I E + +I I+G
Sbjct: 255 NKTSSAVRLTHIPTGIVVSCQVERSQHQNREVAMKMLASKLMEIKEREHLDKISDIKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
+ WG QIR+YVF PY L KD RT +E +I +VMDG+++ FI +YLK + SL +D
Sbjct: 315 KEIGWGSQIRSYVFMPYTLAKDHRTNYEMGNINAVMDGDIDGFINAYLKQESLNSLEKND 374
>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
intestinalis M50/1]
gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
intestinalis XB6B4]
Length = 338
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 211/323 (65%), Gaps = 3/323 (0%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ +Q+ ++ L +KD + KT+ +D T++++ E DA L+ E +
Sbjct: 5 NFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYE--ENDASLIPEIQEM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
+ E K + + LLSG YD +GA++S+ AGAGGT++ DWA ML RMY RW + +
Sbjct: 63 LDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKGFS 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
V++ GEEAGIKS ++ G AYGY+ EKG HR+VR SPFNA G RQTSF +V
Sbjct: 123 VEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSCDV 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP + EE +DV+I E+DL I R+ G GGQ++NK +A+RITHIPTG+ V+C ERSQ
Sbjct: 183 MPDI-EEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQF 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
NK KA+ LKAKL ++ +++ A + IRG+ + WG QIR+YV PY +VKD RTG
Sbjct: 242 QNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRTGV 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKY 367
ET ++ SVMDG+++ FI YLK+
Sbjct: 302 ETGNVDSVMDGKIDIFINGYLKW 324
>gi|309791264|ref|ZP_07685795.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG-6]
gi|308226690|gb|EFO80387.1| hypothetical protein OSCT_1746 [Oscillochloris trichoides DG6]
Length = 361
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 225/340 (66%), Gaps = 3/340 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+++++ LE +AA+ W++ AQ +Q LT +KD++ T+ ++++ ++ LTE
Sbjct: 24 QEQISSLEERAAEPDLWNDPRTAQGVMQQLTRLKDEVAQWTNLESQLISLDELIDLTEA- 82
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
DA L E A+ ++ K L Q EL LLSGPYD A +SI AG GGTDAQDWADM+
Sbjct: 83 -EGDATLYTEIAAEVRAAQKELAQRELALLLSGPYDDRDAFVSIQAGMGGTDAQDWADMM 141
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY+RW E + Y +V+ S G+EAGIKSA +E+ G YAYG + E G HR++R SPFN
Sbjct: 142 LRMYLRWAETRGYSVTIVDMSAGDEAGIKSATLELRGPYAYGNIRAEAGVHRLIRLSPFN 201
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A RQTSF+ EV+P + +++ +V I EDL I R+GG GGQ VN ++AVR+TH+P
Sbjct: 202 AAHTRQTSFARVEVVPEV-DDAPEVTIKPEDLRIDVFRSGGHGGQGVNTTDSAVRLTHLP 260
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V C ERSQL N+ A+ L+ +LL +++ E ++RG+ A +G Q+R Y
Sbjct: 261 TGIVVTCQNERSQLQNRETAMRVLRGRLLERELQRQLEERARLRGEHRDAAFGSQMRTYY 320
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
HP LVKD RT HETS++ +V+DG+L+PFI++YL++ S
Sbjct: 321 LHPSTLVKDHRTEHETSNVYAVLDGQLDPFIEAYLRWNVS 360
>gi|444305081|ref|ZP_21140868.1| peptide chain release factor 2 [Arthrobacter sp. SJCon]
gi|443482616|gb|ELT45524.1| peptide chain release factor 2 [Arthrobacter sp. SJCon]
Length = 371
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 237/342 (69%), Gaps = 4/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L++++AEL +A + WD+ A AQ+ L+ + ++ LT ++++DD +V+L
Sbjct: 26 VEALKEDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTSLESRIDDLEVLVEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
++ D DA + EAA+ ++ + KAL + E+ LLSG YD+ AV+SI AGAGG DA D+
Sbjct: 86 GQDED--DADSMGEAATELESIRKALKELEVVTLLSGEYDEREAVVSIRAGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YAYG LS E GTHR+VR
Sbjct: 144 AEMLLRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLSVEAGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+PL+ E++ ++IP+ ++ + R+ G GGQ+VN ++AVR+
Sbjct: 204 SPFDNQGRRQTSFAAVEVIPLI-EQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRL 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG V E+SQL N+ A+ L+++LL++ +EQ +E K + GD VKA WG Q+
Sbjct: 263 THIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD-VKASWGDQM 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV +PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 322 RSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363
>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
faecalis TUSoD Ef11]
gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
faecalis TUSoD Ef11]
Length = 366
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 229/364 (62%), Gaps = 3/364 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++ + ++ R S L QLE+++AE E + + FWDN AQ+ + +K+K
Sbjct: 6 IRTLLDEMTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++D+ + +L +E DA + EE I L + L +EL+ LL+ PYD
Sbjct: 66 YQQFHQLSEELDELTVMFELQQE--EYDAEIQEELEERIHLLQERLTTYELSLLLNEPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A+I + GAGGT++QDW MLLRMY RW E ++ ++ G+EAGIKS + ++
Sbjct: 124 HNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ R TSF +VMP L ++++++ I +DL+I
Sbjct: 184 GYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSVDVMPEL-DDTIEIAINPDDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+AVRITHIPTG V +RSQL N+ +A+S LKAKL + E++
Sbjct: 243 YRASGAGGQHINKTESAVRITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E +RG+ ++ WG QIR+YVFHPY +VKD RT +ET ++ +VMDG+L+ FI +YLK
Sbjct: 303 AQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLK 362
Query: 367 YKYS 370
+ S
Sbjct: 363 QRLS 366
>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
F4969]
gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
F4969]
Length = 323
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 213/323 (65%), Gaps = 4/323 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
++ FWD+ +AQE Q VKDKI+ + ++DD + +L EE D A +E
Sbjct: 3 EAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNERIDDVEVLKELMEENDEETA---KEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+ +K L+K +D ++ +LSG YD+ A++++ G GG+DA DW +MLLRMY RW EK+
Sbjct: 60 NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAG+KS ++V+G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I DL I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYL 365
ETS++ VMDG+++ FI +YL
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYL 321
>gi|385810075|ref|YP_005846471.1| protein release subunit factor B [Ignavibacterium album JCM 16511]
gi|383802123|gb|AFH49203.1| Protein chain release factor B [Ignavibacterium album JCM 16511]
Length = 351
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/339 (48%), Positives = 227/339 (66%), Gaps = 3/339 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L EK++ EL+ K+ S FW ++ AQ+ LQ + ++ + L K AV L
Sbjct: 10 LDNKEKKITELQKKSESSDFWTDQKSAQQILQEIKSLQSWVELWKSVHQKAS-AVEETIL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+M+ ++ EE + EL KA+++ E +LSG D + +++I +GAGGT+AQDW
Sbjct: 69 LAQMEEDES-FEEEIDKELAELEKAIEEAEFKNMLSGKDDDKNCILTIHSGAGGTEAQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY+RWGEK YK +++ G+ AGIKSA +EVEG +AYGYL E G HR+VR
Sbjct: 128 AEMLLRMYLRWGEKNGYKMTIIDMLEGDGAGIKSATVEVEGPFAYGYLKAENGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+A R TSF+ V+P + ++S++++I DL+I R+GGKGGQNVNKVETAVRI
Sbjct: 188 SPFDANKRRHTSFASVFVIPEI-DDSIEIEINPADLKIDTYRSGGKGGQNVNKVETAVRI 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ C ERSQL N+ A+ LKA+L + E++ +E ++I +K EWG QI
Sbjct: 247 THIPTGIVAACQTERSQLQNRQNAMKLLKARLYQLELEKQKAEQEEIEKSKMKIEWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
R+YVFHPY +VKD RT ETSD+ SVMDGE++ FIK+YL
Sbjct: 307 RSYVFHPYNMVKDHRTDVETSDVQSVMDGEIDQFIKAYL 345
>gi|147679087|ref|YP_001213302.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
gi|146275184|dbj|BAF60933.1| protein chain release factor B [Pelotomaculum thermopropionicum SI]
Length = 336
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/331 (46%), Positives = 230/331 (69%), Gaps = 5/331 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
LE + + FWD + +AQ+ +Q L+ ++D++ + ++D + +L EE + A
Sbjct: 2 LERQMLEPGFWDGQEKAQKAVQRLSSLRDRVAVFQRLDKDLEDLEVLAELGEEEEDEAAA 61
Query: 97 L-LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+++ +++ + + + ELT LLSGPYD+ A++++ AGAGGT+AQDW +MLLRMY
Sbjct: 62 AEVKQGLAVVAQ---KVAEMELTVLLSGPYDRGNAIVALHAGAGGTEAQDWVEMLLRMYT 118
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E++ +K V++ G+EAG KSA IEV G AYGYL EKG HR+VR SPF+A G R
Sbjct: 119 RWAERRGFKVEVLDLLPGDEAGTKSATIEVIGPNAYGYLRSEKGVHRLVRISPFDAAGRR 178
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
TSF+ +V+P + +E +DV+I +DL+I R+GG GGQ+VNK ++AVRITH+PTG+ V
Sbjct: 179 HTSFASVDVLPEVDDE-VDVKINPDDLKIDTFRSGGAGGQHVNKTDSAVRITHLPTGIVV 237
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
C ERSQLAN++ A+ LKA+L+ + ++ +E+ +RG+ + WG QIR+YVFHPY
Sbjct: 238 TCQNERSQLANRLAAMKMLKARLIDLELRKKEAELAALRGEQQEIAWGSQIRSYVFHPYS 297
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
LVKD RTGHET ++ +VMDGE++ FI +YL+
Sbjct: 298 LVKDHRTGHETGNVGAVMDGEIDSFIAAYLR 328
>gi|253680935|ref|ZP_04861738.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
gi|253562784|gb|EES92230.1| peptide chain release factor 2 [Clostridium botulinum D str. 1873]
Length = 327
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/326 (48%), Positives = 222/326 (68%), Gaps = 7/326 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT--EEMDSTDAGLLEE 100
+S+FWDN +AQE Q +KDKI + K +++D +++++ E+ +S+ +L E
Sbjct: 3 ESNFWDNINKAQEITQEAKGLKDKIEKYYNTKNRLEDLKVLIEISIEEDDESSVEEILNE 62
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
IKE+ +D+F++ LLSG YDK A++S+ AGAGGTDAQDW +MLLRMY RW E
Sbjct: 63 ----IKEVKVIIDEFKVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWAEA 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ YK +++ G+EAGIKSA +++ G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 119 KGYKVEILDILPGDEAGIKSASLKIMGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
EV+P L ES D++I +DL I RA G GGQ++NK ++AVRITHIPTG+ V+ E
Sbjct: 179 SLEVLPELT-ESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSE 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY +VKD
Sbjct: 238 RSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDH 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
RT E +++ +VMDG+++ FI YLK
Sbjct: 298 RTNTEMTNVDAVMDGDIDIFIVEYLK 323
>gi|330465934|ref|YP_004403677.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
gi|328808905|gb|AEB43077.1| peptide chain release factor 2 [Verrucosispora maris AB-18-032]
Length = 373
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/376 (43%), Positives = 242/376 (64%), Gaps = 7/376 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D+ + KD++A + I A L +L + A LE +A+ WD++A AQ+ L+
Sbjct: 5 DYADQLKDLDAT---LRNIEAVLDLDRLRADKARLEQEASAPDLWDDQARAQQVTSQLSY 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +I L ++++DDA +++L E D+G+L E S I L KA+ + E+ LLS
Sbjct: 62 VNGEIEKLGSLRSRIDDANVLLELAEA--EADSGVLSEVESEITGLAKAIQEMEVRTLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA
Sbjct: 120 GEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ + IPE ++
Sbjct: 180 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDSIDIPENEM 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
I R+ G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L+A+LL
Sbjct: 239 RIDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ +++ ++ DA + WG Q+R+YV HPY++VKD+RT ET + +V DG+L+ FI+
Sbjct: 299 RQEEQAKMAGLKTDAAGS-WGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGDLDSFIE 357
Query: 363 SYLKYKYSMSLSASDA 378
+ ++++ L+ A
Sbjct: 358 AGIRWRKQQQLAGDAA 373
>gi|118090032|ref|YP_873927.1| peptide chain release factor 2 [Streptococcus pneumoniae TIGR4]
gi|123517990|sp|Q2MGI2.1|RF2_STRPN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|85720582|gb|ABC75805.1| peptide chain release factor 2, programmed frameshift
[Streptococcus pneumoniae TIGR4]
Length = 364
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 237/368 (64%), Gaps = 5/368 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ ++A +++ R S L+ LE+E+A LE K + FW++ AQ+T Q L +
Sbjct: 2 DISVIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K+ N + D+ ++ E D + +E + + EL+K + +E+T LLS
Sbjct: 62 LKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQLAELDKIMTSYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K V++ G+EAGIKS
Sbjct: 118 EPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ EG AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V+I E+D+
Sbjct: 178 LSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVEIREDDI 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ +A+ L+AKL +
Sbjct: 237 KMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQME 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E + + VMDG+L+ FI
Sbjct: 297 QDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFID 356
Query: 363 SYLKYKYS 370
+YLK++ S
Sbjct: 357 AYLKWRIS 364
>gi|423349181|ref|ZP_17326837.1| peptide chain release factor 2 [Scardovia wiggsiae F0424]
gi|393703410|gb|EJD65611.1| peptide chain release factor 2 [Scardovia wiggsiae F0424]
Length = 373
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 240/375 (64%), Gaps = 6/375 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y+ +D+ A + I + GL L +++A LE +AA WD++ AQ L +
Sbjct: 4 YDFTQDLGEARTKFTTITRAVGLDSLRRKIAGLEKEAAAPGLWDDQDNAQRVTSQLAQAQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+++ L D +++DD + L E + D+ +EA +K +++ L E+ LL G
Sbjct: 64 NELKQLEDIGSRLDDIEVLYSLGSEEEDADS--RDEAREELKAVSRELSDVEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD AV++I +GAGG DA DWA ML+RMYVRW E+ Y+ +V++ S EEAGIKSA E
Sbjct: 122 YDNRAAVVTIRSGAGGVDAADWAQMLMRMYVRWAERHGYRLQVMDTSYAEEAGIKSATFE 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLL-PEESMDVQIPEEDLE 243
++ YAYG LS E GTHR+VR SPF+ RQTSF+ EV+PL+ P + +D IP+ D+
Sbjct: 182 IDAPYAYGKLSVEGGTHRLVRISPFDNNSRRQTSFAAVEVIPLVEPTDHID--IPDSDIR 239
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ + G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A+S L+++LLVI +
Sbjct: 240 VDTYMSHGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMSVLQSRLLVIKQ 299
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
E+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS+ +V DG+++ I +
Sbjct: 300 EEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSNTQNVFDGDIDGLIDA 358
Query: 364 YLKYKYSMSLSASDA 378
+++++ + +A
Sbjct: 359 GIRWRHQQRKGSGNA 373
>gi|291531340|emb|CBK96925.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
siraeum 70/3]
Length = 370
Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/366 (43%), Positives = 231/366 (63%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M ++ L+ + E ++E+ + L L+ E+A+LE ++A FW++ +Q+ Q +
Sbjct: 1 MLEYDELKVEFEGYEPELKELAGALDLDNLKTEIAKLEEQSAQPDFWNDVENSQKISQKI 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ K+ + + DD +T+++L +E D D +L E + K L+ +L L
Sbjct: 61 GEDKNIVQSYEKLRESYDDVMTMLELAQEED--DESMLPEIQELAKHFRTELESQKLATL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG +D A+++ AGAGGT+AQDW +ML RMY W E+ K V++ GEEAGIKS
Sbjct: 119 LSGEFDHNNAILTFHAGAGGTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A I VEGR AYGYL E G HR+VR SPF++ G R TSF+ EVMP + E+ +D++I E+
Sbjct: 179 ASILVEGRNAYGYLKSENGVHRLVRVSPFDSSGRRHTSFASVEVMPEINED-IDIEISED 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
++++ RA G GGQ VNK +AVRITHIPTG+ C ERSQ N+ A+ LK+KLL
Sbjct: 238 EIKMDVYRASGAGGQKVNKTSSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLE 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I E + +I I+G+ ++ WG QIR+YVF PY +VKD RTG+E +I +VMDG+L+ F
Sbjct: 298 IKEREHLDKISDIKGEQLQIAWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGF 357
Query: 361 IKSYLK 366
I +YLK
Sbjct: 358 INAYLK 363
>gi|421766881|ref|ZP_16203649.1| Peptide chain release factor 2 [Lactococcus garvieae DCC43]
gi|407624677|gb|EKF51412.1| Peptide chain release factor 2 [Lactococcus garvieae DCC43]
Length = 368
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 236/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E+ +VE+ R S L +LE+E+A L+ A+ FW++ AQ+ + +K K
Sbjct: 9 IRNKLESYGQKVEDFRGSLDLDRLEEEIALLDNDMAEPDFWNDNEAAQKVIDESNALKAK 68
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
T +D+ ++++ +E + D + E ++EL K ++ +EL +L+ PYD
Sbjct: 69 YENFMSIATLHEDSEVMLEMLQEEEDED--MQTELEDNVEELGKKIETYELEIMLNQPYD 126
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT++QDW ML+RMY RWG +K +++ G+ AG+KSA ++ E
Sbjct: 127 HMNAILEIHPGSGGTESQDWGSMLMRMYERWGAAHGFKVEILDYQDGDVAGLKSATLKFE 186
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF+++ R TSF+ +VMP L +++++V + + D+++
Sbjct: 187 GRNAYGFLRGEKGVHRLVRISPFDSQNRRHTSFTSVDVMPEL-DDTVEVDVRDADIKMDT 245
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+TH+PTG+ V T +R+Q N+ KA++ LK+KL + +++
Sbjct: 246 FRSGGAGGQNVNKVSTGVRLTHVPTGIVVASTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 305
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD WG QIR+YVF PY+LVKD RT HET I VMDG+L+ FI +YL+
Sbjct: 306 QAEVDELRGDQSDISWGSQIRSYVFMPYQLVKDTRTEHETGQIDKVMDGDLDGFIHAYLR 365
Query: 367 YK 368
+K
Sbjct: 366 WK 367
>gi|116511800|ref|YP_809016.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
SK11]
gi|385838511|ref|YP_005876141.1| Peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
A76]
gi|414074197|ref|YP_006999414.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
UC509.9]
gi|122940216|sp|Q02ZM8.1|RF2_LACLS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116107454|gb|ABJ72594.1| bacterial peptide chain release factor 2 (bRF-2) [Lactococcus
lactis subsp. cremoris SK11]
gi|358749739|gb|AEU40718.1| Peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
A76]
gi|413974117|gb|AFW91581.1| peptide chain release factor 2 [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 365
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 236/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E S+++ R S L +LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYSEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNNMLEEAQTMLEMLQE--EADEDMQVELEEMTTALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
AV+ I G+GGT++QDW ML+RMY RWGE +K +++ G+ AG+KS I
Sbjct: 124 HMNAVLEIHPGSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFV 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF++ R TSF+ +VMP L ++S++V++ + D+++
Sbjct: 184 GRNAYGFLRGEKGVHRLVRISPFDSANRRHTSFTSVDVMPEL-DDSIEVEVRDADVKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+TH+PTG+ V+ T +R+Q N+ KA++ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD + WG QIR+YVF PY+LVKD RTG+ET I +VMDGE++ FI +YL+
Sbjct: 303 QAEVDELRGDQSEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLR 362
Query: 367 YK 368
+
Sbjct: 363 WN 364
>gi|284048024|ref|YP_003398363.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
20731]
gi|283952245|gb|ADB47048.1| peptide chain release factor 2 [Acidaminococcus fermentans DSM
20731]
Length = 366
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 232/361 (64%), Gaps = 5/361 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ + D++EE++ + Q E+ + +LE + A FWD+ +AQ Q ++K +
Sbjct: 6 LKPAITQLKDKLEELKGGLKIAQKEERIEDLEHQMAAPGFWDDPDKAQTVAQEANNLKTE 65
Query: 67 INLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ K+DD T+ ++ EE D + G +EE ++ K L EL LLS Y
Sbjct: 66 VETYHGLAAKLDDVETLWEMAMEEKDDSLQGEIEEE---VENARKTLADLELGMLLSDQY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW +MLLRMY R+ E++ + +++ GEEAGIKSA + V
Sbjct: 123 DANNAILTLHAGAGGTEAQDWTNMLLRMYTRYAEQKGFTVELLDVLPGEEAGIKSATLTV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYGYL EKG HR+VR SPF+A R TSF+ +VMP L +E+++V + +D+ +
Sbjct: 183 QGHNAYGYLKSEKGVHRLVRISPFDANARRHTSFAAVDVMPEL-DETVEVNLNMDDVRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ+VNK +AVR+THIPTG+ V+C ERSQL NK + L+ L+AKL +
Sbjct: 242 YYRASGAGGQHVNKTSSAVRMTHIPTGIVVQCQNERSQLQNKERCLALLRAKLYEYEKAI 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ +I ++ GD EWG QIR+YVF PY +VKD RTG ET +I +VMDG+L+PF+++YL
Sbjct: 302 QDKKISELAGDYQAIEWGSQIRSYVFQPYTMVKDHRTGAETGNIQAVMDGDLDPFVEAYL 361
Query: 366 K 366
+
Sbjct: 362 R 362
>gi|357038237|ref|ZP_09100035.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
gi|355359812|gb|EHG07572.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
Length = 329
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/321 (46%), Positives = 221/321 (68%), Gaps = 3/321 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW+ ++ AQE Q +T++K++I ++ M+D ++ L EE D L +EA + +
Sbjct: 6 FWEEQSRAQEVTQTVTNLKERITAFSELYGAMEDLEVLIDLGEE--ENDDSLADEAEAAL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+LN+ + E+ +LSGPYD A++++ AGAGGT+AQDW MLLRM+ RW E + ++
Sbjct: 64 AQLNRRVAGLEMQVMLSGPYDAGNAIVAMHAGAGGTEAQDWVAMLLRMFTRWAENRGFRV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+++ G+EAG+KS V G A+GYL EKG HR+VR SPF+A G R TSF+ +V+
Sbjct: 124 NIMDMLPGDEAGVKSVTFSVAGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVL 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++ +DVQI EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V+C ERSQL+
Sbjct: 184 PEV-QDDIDVQIDPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQLS 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ LKAKL + +++ +E+ Q+RG+ + WG QIR+YVFHPY LVKD RTG E
Sbjct: 243 NRNTAMKLLKAKLFDLEMQKKDAELAQMRGENKEIAWGSQIRSYVFHPYSLVKDHRTGVE 302
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
++ +VMDGE++ FI +YL+
Sbjct: 303 MGNVDAVMDGEIDDFITAYLR 323
>gi|302865524|ref|YP_003834161.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
27029]
gi|315502072|ref|YP_004080959.1| peptide chain release factor 2 [Micromonospora sp. L5]
gi|302568383|gb|ADL44585.1| peptide chain release factor 2 [Micromonospora aurantiaca ATCC
27029]
gi|315408691|gb|ADU06808.1| peptide chain release factor 2 [Micromonospora sp. L5]
Length = 373
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 241/376 (64%), Gaps = 7/376 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D+ KD++A + I A L +L ++ A LE +A+ WD++A+AQ+ L+
Sbjct: 5 DYAEQLKDLDAT---LRNIEAVLDLDKLREQKARLEQEASAPDLWDDQAKAQQVTSQLSY 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +I L D ++++DDA +++L + D D G L E S I L KA+ + E+ LLS
Sbjct: 62 VNGEITKLGDLRSRLDDAGVLLELAQAED--DPGALTEVESEITGLTKAIQEMEVRTLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA
Sbjct: 120 GEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EV+P+ E++ + IPE ++
Sbjct: 180 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVT-EQTDHIDIPENEV 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ R+ G GGQ+VN ++AVR+THIPTG+ V C E+SQL NK A+ L+A+LL
Sbjct: 239 RVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQARLLERK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ ++ ++ + + WG Q+R+YV HPY++VKD+RT ET + SV DG+L+ FI+
Sbjct: 299 RQEEEEKLAGLKTGSTSS-WGDQMRSYVLHPYQMVKDLRTEQETGNPSSVFDGDLDSFIE 357
Query: 363 SYLKYKYSMSLSASDA 378
+ ++++ LSA A
Sbjct: 358 AGIRWRKQQQLSADSA 373
>gi|347521912|ref|YP_004779483.1| peptide chain release factor [Lactococcus garvieae ATCC 49156]
gi|385833296|ref|YP_005871071.1| peptide chain release factor [Lactococcus garvieae Lg2]
gi|420144463|ref|ZP_14651951.1| Peptide chain release factor 2 (RF-2) [Lactococcus garvieae IPLA
31405]
gi|343180480|dbj|BAK58819.1| peptide chain release factor [Lactococcus garvieae ATCC 49156]
gi|343182449|dbj|BAK60787.1| peptide chain release factor [Lactococcus garvieae Lg2]
gi|391855915|gb|EIT66464.1| Peptide chain release factor 2 (RF-2) [Lactococcus garvieae IPLA
31405]
Length = 365
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 238/363 (65%), Gaps = 5/363 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +EA +VE+ R S L +LE+E+A L+ A+ FW++ AQ+ + +K K
Sbjct: 6 IRNKLEAYGQKVEDFRGSLDLDRLEEEIALLDNDMAEPDFWNDNEAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGL-LEEAASIIKELNKALDQFELTQLLSGPY 125
T +D+ ++++ +E D D + LEE +++L K ++ +EL +L+ PY
Sbjct: 66 YENFMSIATLHEDSEVMLEMLQEEDDEDMQVELEEN---VEKLGKKIETYELEIMLNQPY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ I G+GGT++QDW ML+RMY RWG +K V++ G+ AG+KSA ++
Sbjct: 123 DHMNAILEIHPGSGGTESQDWGSMLMRMYERWGAAHGFKVEVLDYQDGDVAGLKSATLKF 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
EGR AYG+L GEKG HR+VR SPF+++ R TSF+ +VMP L +++++V + + D+++
Sbjct: 183 EGRNAYGFLRGEKGVHRLVRISPFDSQNRRHTSFTSVDVMPEL-DDTVEVDVRDADIKMD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+GG GGQNVNKV T VR+TH+PTG+ V T +R+Q N+ KA++ LK+KL + ++
Sbjct: 242 TFRSGGAGGQNVNKVSTGVRLTHVPTGIVVASTMDRTQYGNRDKAMAMLKSKLYQLEMDK 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ +E+ ++RGD WG QIR+YVF PY+LVKD RT +ET I VMDG+L+ FI +YL
Sbjct: 302 KQAEVDELRGDQSDISWGSQIRSYVFMPYQLVKDTRTEYETGQIDKVMDGDLDGFIHAYL 361
Query: 366 KYK 368
++K
Sbjct: 362 RWK 364
>gi|219123603|ref|XP_002182112.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406713|gb|EEC46652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 406
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 175/375 (46%), Positives = 239/375 (63%), Gaps = 16/375 (4%)
Query: 7 LRKDVEAASDRVEEIRASAG-LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD--V 63
+++D ++A++ + AS L L+ ++A+LE + + FWD EA + A+ + V
Sbjct: 23 VKRDFQSATELYRKNLASTTKLPALQSQIADLETEQSQPDFWD---EANTSRAAIVNAQV 79
Query: 64 KDKINLLTDFKTKMD---DAVTIVKLTEEMDSTD-AGLLEEAASIIKELNKALDQFELTQ 119
LLT + + DA +++ ++ S + A LL+E S I L + D+FEL
Sbjct: 80 STATRLLTRIQAWQEWHGDAQAALEILSQLASEERAMLLDEFRSAIARLREDSDRFELEL 139
Query: 120 LLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIK 179
LLSGPYD A + +TAGAGGT+A DW L RMY R E V ++ GE G K
Sbjct: 140 LLSGPYDHAPARLLLTAGAGGTEANDWVGDLKRMYQRHCEAMGLSCVVQDEQAGEAVGYK 199
Query: 180 SAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD----- 234
S + V G AYG+L GEKG HR+VR SPFNA RQT+F+G +V P + + D
Sbjct: 200 SVELLVSGDNAYGWLQGEKGAHRMVRLSPFNANNKRQTTFAGVDVAPDILNQDDDAYWNT 259
Query: 235 VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRL 294
+ +PE +LEI+ RAGGKGGQNVNKV +AVRI H+P+G+ V+C +ERSQ NK AL RL
Sbjct: 260 IDVPESELEITTMRAGGKGGQNVNKVNSAVRIKHLPSGLQVKCAQERSQSMNKNIALKRL 319
Query: 295 KAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMD 354
KA+LL I +EQR +EIK+IRGD V+A WG QIRNYVFHPYK+VKD RTG ETS++ + MD
Sbjct: 320 KAQLLAIVQEQRVAEIKEIRGDMVEASWGAQIRNYVFHPYKMVKDQRTGWETSNVQAFMD 379
Query: 355 GE-LEPFIKSYLKYK 368
G+ LE I S+L++K
Sbjct: 380 GDLLEECIGSFLRHK 394
>gi|325963891|ref|YP_004241797.1| peptide chain release factor 2 (bRF-2) [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469978|gb|ADX73663.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter
phenanthrenivorans Sphe3]
Length = 371
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 239/350 (68%), Gaps = 4/350 (1%)
Query: 19 EEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMD 78
E I + ++ L++++AEL +A + WD+ + AQ+ L+ + ++ L + +++D
Sbjct: 18 ESIERVSDVEALKEDIAELSERAGEPDLWDDPSAAQKITSRLSHRQSELERLNNLASRID 77
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
D +V+L ++ D DA + EAA+ ++ + KAL + E+ LLSG YD+ AV+SI AGA
Sbjct: 78 DLEVLVELGQDED--DAASMGEAAAELESIKKALKELEVVTLLSGEYDEREAVVSIRAGA 135
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YAYG LS E
Sbjct: 136 GGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAYGTLSVEA 195
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IP+ ++ + R+ G GGQ+VN
Sbjct: 196 GTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIEIPDNEIRVDVFRSSGPGGQSVN 254
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+THIPTG V E+SQL N+ A+ L+++LL++ +EQ +E K + GD V
Sbjct: 255 TTDSAVRLTHIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD-V 313
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KA WG Q+R+YV +PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 314 KASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363
>gi|386866739|ref|YP_006279733.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385700822|gb|AFI62770.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
animalis ATCC 25527]
Length = 377
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/372 (41%), Positives = 245/372 (65%), Gaps = 4/372 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + +L+ + AELE +A+ WD+ AQ+ + L+ +
Sbjct: 4 FDYSQAISDARAKYESIALALDTDRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L+ +++DD T+V+L +E DA L EA + I+ + K LDQ E+ L+ G
Sbjct: 64 SQLKHLSSAASRLDDVATLVELGQE--ENDADTLHEAQTEIESIQKDLDQMEIETLMDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 122 YDSRSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++ YAYG +S E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + +++P+ ++ +
Sbjct: 182 IDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIEVPDSEIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCASGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAG 359
Query: 365 LKYKYSMSLSAS 376
+++++ L A+
Sbjct: 360 IRWRHEQRLKAA 371
>gi|163789840|ref|ZP_02184276.1| peptide chain release factor 2, programmed frameshift
[Carnobacterium sp. AT7]
gi|159874780|gb|EDP68848.1| peptide chain release factor 2, programmed frameshift
[Carnobacterium sp. AT7]
Length = 353
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/344 (45%), Positives = 227/344 (65%), Gaps = 3/344 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE+++AE + + +FW++ +AQ + ++K+K N D T+ +D ++++
Sbjct: 9 LENLERDIAEYNDRMTEPTFWEDAQKAQTVINEANELKEKYNQYNDLVTEKEDLELLLEM 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E D L +E S I LDQ+EL LLS PYDK A+I + GAGGT++QDW
Sbjct: 69 VKE--ENDEELAKELNSKISPFLDKLDQYELDLLLSDPYDKNNAIIELHPGAGGTESQDW 126
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
+LLRMY RW EK+ +K + G+EAGIKS + ++G AYGYL EKG HR+VR
Sbjct: 127 GSLLLRMYTRWAEKRGFKIETLNYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHRLVRI 186
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF +V+P L ++S+D++I +DL+I RA G GGQ++N ++AVRI
Sbjct: 187 SPFDSAGRRHTSFVSIDVVPEL-DDSVDIKINSDDLKIDTYRATGAGGQHINTTDSAVRI 245
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIP+GV V +RSQL N+ +A+S LKAKL + E++ E+ IRG+ ++ WG QI
Sbjct: 246 THIPSGVVVASQAQRSQLKNRDQAMSMLKAKLYQLEVEEQEKEMAAIRGEQLEIGWGSQI 305
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
R+YVFHPY +VKD RT +ET +I VMDG ++PFI++YL+ K S
Sbjct: 306 RSYVFHPYSMVKDHRTNYETGNIAQVMDGGIDPFIQAYLRSKVS 349
>gi|220913146|ref|YP_002488455.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
gi|254790908|sp|B8HBH8.1|RF2_ARTCA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|219860024|gb|ACL40366.1| peptide chain release factor 2 [Arthrobacter chlorophenolicus A6]
Length = 371
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 235/350 (67%), Gaps = 4/350 (1%)
Query: 19 EEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMD 78
E I ++ L +++AEL +A + WD+ A AQ+ L+ + ++ LT +++D
Sbjct: 18 ESIERVTDMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTLASRID 77
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
D +V+L + D DA + EAA+ ++ + KAL E+ LLSG YD+ AV+SI AGA
Sbjct: 78 DLEVLVELGQ--DEGDADSMGEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIRAGA 135
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E
Sbjct: 136 GGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEA 195
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IP+ ++ + R+ G GGQ+VN
Sbjct: 196 GTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIDIPDNEIRVDVFRSSGPGGQSVN 254
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+THIPTGV V E+SQL N+ A+ L+++LL++ +EQ +E K + GD V
Sbjct: 255 TTDSAVRLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD-V 313
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KA WG Q+R+YV +PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 314 KASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363
>gi|385779195|ref|YP_005688360.1| peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
Length = 375
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 229/365 (62%), Gaps = 3/365 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + L+ +++ ++E+ S + + ++ ELE KA++ FW++ +Q+ LQ +
Sbjct: 1 MLELEQLKLEIDDFKQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKI 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++ K+ ++ +D +T+ +L ++ D ++ EA K K + L L
Sbjct: 61 KSLRSKVERYNKLVSQWEDLITLCELG--IEEQDESVIPEAVEGFKAFKKEFEALRLETL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+G YDK A++++ AGAGGT+AQDW ML RMY RW EK+ + +V++ GEEAGIKS
Sbjct: 119 LTGQYDKNNAILTLHAGAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+V G AYG+L EKG HR+VR SPF+A G R TSF+ +VMP L ++ ++V I +
Sbjct: 179 VTFQVIGENAYGFLKSEKGVHRLVRISPFDASGRRHTSFASLDVMPELNDD-IEVHINPD 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I R+ G GGQ++NK E+AVRITHIPTG+ V C ERSQ NK A+ LKAKL+
Sbjct: 238 DLRIDTYRSSGAGGQHINKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLME 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ E + +I+ ++G ++ WG QIR+YVF PY LVKD RT +E ++ +VMDGEL+ F
Sbjct: 298 LKERENKEKIEDLKGIQLEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGF 357
Query: 361 IKSYL 365
I SYL
Sbjct: 358 INSYL 362
>gi|170759975|ref|YP_001785502.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
Maree]
gi|169406964|gb|ACA55375.1| peptide chain release factor 2 [Clostridium botulinum A3 str. Loch
Maree]
Length = 327
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 212/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW+N EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNNIKEAQKITSEEKYLKDKLIKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL GEKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FSIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINMFITQYLK 322
>gi|424828125|ref|ZP_18252866.1| peptide chain release factor 2 [Clostridium sporogenes PA 3679]
gi|365979608|gb|EHN15661.1| peptide chain release factor 2 [Clostridium sporogenes PA 3679]
Length = 327
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD+ EAQ+ +KDK+ D K+ ++D I+ L E + D + +E
Sbjct: 3 NPNFWDDIKEAQKITSEEKYLKDKLIKYNDLKSTIED---IISLCEMLSDDDDDMGKEIL 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + +D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEEIDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYKY 369
G ETS++ +VM+G++ FI YLK +
Sbjct: 299 GAETSNVDAVMNGDINIFITEYLKGNF 325
>gi|420156842|ref|ZP_14663682.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
gi|394756852|gb|EJF39911.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
Length = 375
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 232/366 (63%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M F LR +E + ++ + GLQ +++E+++L+ +AA FWD+ +Q+ LQ
Sbjct: 1 MLQFEELRLALEKLRPDINDLADALGLQGMKEEISQLDERAAMPGFWDDMERSQKILQRS 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ +K+KI + ++DA+ +V+L +E + D LL EA +++ L+ LT L
Sbjct: 61 SMLKNKIANYEKLCSSLEDALALVELADE--AEDLSLLPEAQQEYQKIQTELEAIRLTTL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L G YD + A+++ AGAGGT+AQDWA ML RMY RW E+ ++ + ++ GEEAG+KS
Sbjct: 119 LKGEYDAKNAILTFHAGAGGTEAQDWASMLYRMYCRWAERHGFQVKTLDYLDGEEAGLKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A I +EG AYG+L E G HR+VR SPF+A G R TSF+ EVMP + ++ V+I +
Sbjct: 179 ASILIEGINAYGFLKSEAGVHRLVRVSPFDASGRRHTSFASLEVMPEIDSDT-SVEISPD 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+E+ RA G GGQ VNK +AVR+TH PTG+ V C ERSQ N+ A+ L +KL+
Sbjct: 238 DIEMQVYRASGAGGQKVNKTSSAVRLTHKPTGIVVSCQVERSQYQNRDVAMKMLISKLVE 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I E + +I+ I+GD + WG QIR+YVF PY L KD RTG E +I +VMDG+L+ F
Sbjct: 298 IKEREHLEKIEDIKGDQKEIAWGSQIRSYVFMPYTLAKDHRTGFEMGNISAVMDGDLDGF 357
Query: 361 IKSYLK 366
I +YLK
Sbjct: 358 INAYLK 363
>gi|170755895|ref|YP_001779801.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
gi|429243946|ref|ZP_19207428.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001628]
gi|169121107|gb|ACA44943.1| peptide chain release factor 2 [Clostridium botulinum B1 str. Okra]
gi|428758866|gb|EKX81257.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001628]
Length = 325
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 213/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLIKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + +D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEEIDKFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL GEKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
E++P L E+ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EILPELTEDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINIFITQYLK 322
>gi|167750196|ref|ZP_02422323.1| hypothetical protein EUBSIR_01170 [Eubacterium siraeum DSM 15702]
gi|167656758|gb|EDS00888.1| peptide chain release factor 2 [Eubacterium siraeum DSM 15702]
gi|291556130|emb|CBL33247.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
siraeum V10Sc8a]
Length = 370
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 230/366 (62%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M ++ L+ + E ++E+ + L L+ E+ +LE ++A FW++ +Q+ Q +
Sbjct: 1 MLEYDELKVEFEGYEPELKELAGALDLDNLKAEIVKLEEQSAQPDFWNDVENSQKISQKI 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ K+ + + DD +T+++L +E D D +L E + K L+ +L L
Sbjct: 61 GEDKNIVQSYEKLRESYDDVMTMLELAQEED--DESMLPEIQELAKHFRTELESQKLATL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG +D A+++ AGAGGT+AQDW +ML RMY W E+ K V++ GEEAGIKS
Sbjct: 119 LSGEFDHNNAILTFHAGAGGTEAQDWVEMLYRMYNHWAEQHGMKVTVLDYLDGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A I VEGR AYGYL E G HR+VR SPF++ G R TSF+ EVMP + E+ +D++I E+
Sbjct: 179 ASILVEGRNAYGYLKSENGVHRLVRVSPFDSSGRRHTSFASVEVMPEINED-IDIEISED 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
++++ RA G GGQ VNK +AVRITHIPTG+ C ERSQ N+ A+ LK+KLL
Sbjct: 238 EIKMDVYRASGAGGQKVNKTSSAVRITHIPTGIVCACQTERSQHQNREYAMRMLKSKLLE 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I E + +I I+G+ ++ WG QIR+YVF PY +VKD RTG+E +I +VMDG+L+ F
Sbjct: 298 IKEREHLDKISDIKGEQLQIAWGAQIRSYVFMPYTMVKDHRTGYEMGNIGAVMDGDLDGF 357
Query: 361 IKSYLK 366
I +YLK
Sbjct: 358 INAYLK 363
>gi|409387622|ref|ZP_11239808.1| Peptide chain release factor 2 [Lactococcus raffinolactis 4877]
gi|399205289|emb|CCK20723.1| Peptide chain release factor 2 [Lactococcus raffinolactis 4877]
Length = 366
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 231/362 (63%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R + D++ R + L +LE+E+A L+ +D SFWD+ AQ+ ++ +K K
Sbjct: 6 IRNQIAQNRDKMVSFRDNLDLDRLEEEIALLDNDMSDPSFWDDNIAAQKVVEQSNQLKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +DD ++++ EE D + E A+ + +L + +EL LL+ PYD
Sbjct: 66 YETFMTMQAMLDDQEVMLEMLEE--DADEEMQAELATELDKLGAKMQAYELEMLLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT++QDW ML+RMY RWG +K VV+ G+ AG+KSA ++
Sbjct: 124 HMNALLEIHPGSGGTESQDWGSMLMRMYERWGNAHNFKVEVVDYQDGDVAGLKSATLKFT 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG+L EKG HR+VR SPF+++ R TSF+ +VMP L ++S++V + + D+++
Sbjct: 184 GNNAYGFLRSEKGVHRLVRVSPFDSQNRRHTSFTSVDVMPEL-DDSIEVDVRDADIKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ A+ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTMDRTQYGNRDLAMKMLKSKLYQLEVDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ +++GD WG QIR+YVF PY+LVKD R+G+ETS I +VMDG+L+ FI +YLK
Sbjct: 303 QAEVDELKGDQADISWGSQIRSYVFMPYQLVKDTRSGYETSQIDNVMDGDLDGFIDAYLK 362
Query: 367 YK 368
+K
Sbjct: 363 WK 364
>gi|328956713|ref|YP_004374099.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
gi|328673037|gb|AEB29083.1| peptide chain release factor 2 [Carnobacterium sp. 17-4]
Length = 351
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 230/346 (66%), Gaps = 3/346 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE+++AE + + +FWD+ +AQ + ++K+K N D T+ ++ ++++
Sbjct: 7 LETLERDIAEYNDRMTEPTFWDDAQKAQAIINEANELKEKYNQYKDLLTEKEELDLLLEM 66
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E D L++E S I LDQ+EL LLS PYDK A+I + GAGGT++QDW
Sbjct: 67 VKE--ENDEELVKELDSKINPFLDKLDQYELELLLSDPYDKNNAIIELHPGAGGTESQDW 124
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
++LLRMY RW EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR
Sbjct: 125 GNLLLRMYTRWAEKRGFKIETLDYQSGDEAGIKSVTLLIKGMNAYGYLKAEKGVHRLVRI 184
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF +V+P L ++S+D++I +DL++ RA G GGQ++N ++AVRI
Sbjct: 185 SPFDSAGRRHTSFVSIDVVPEL-DDSVDIKINSDDLKVDTYRASGAGGQHINTTDSAVRI 243
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTGV V +RSQL N+ +A+S LKAKL + E+ E+ IRG+ ++ WG QI
Sbjct: 244 THMPTGVVVASQAQRSQLKNREQAMSMLKAKLHQLEVEEHEKEMAAIRGEQLEIGWGSQI 303
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
R+YVFHPY +VKD RT +ET +I VMDG ++PFI++YL+ K S +
Sbjct: 304 RSYVFHPYSMVKDHRTNYETGNISQVMDGGIDPFIQAYLRSKISTT 349
>gi|323703031|ref|ZP_08114687.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
574]
gi|323532044|gb|EGB21927.1| peptide chain release factor 2 [Desulfotomaculum nigrificans DSM
574]
Length = 326
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 211/323 (65%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN +Q+ Q L +KDK+ ++ D +++L E + D L +E S +
Sbjct: 6 FWDNTEHSQQVTQKLALLKDKVEAFNSLESAYQDLEVMLELCNEEE--DPLLDDELKSDL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
L K + EL +LSGPYD+ A++S+ AGAGGT++QDW MLLRM+ R+ E YK
Sbjct: 64 ASLTKRVADMELEVMLSGPYDRNDAILSLHAGAGGTESQDWVQMLLRMFTRYCENHNYKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAG+KSA I+V G AYGYL EKG HR+VR SPF+A G R TSF+ +V+
Sbjct: 124 EVLDLLPGDEAGVKSATIQVSGPNAYGYLKSEKGVHRLVRISPFDAAGRRHTSFASVDVL 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P++ +E ++V I EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ
Sbjct: 184 PVVDDE-VEVNIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTY 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ LKAKL+ + ++ E+ +RGD WG QIR+YVFHPY LVKD RTG E
Sbjct: 243 NRAAAMKLLKAKLIDLELRKKEEELAALRGDQKDIAWGSQIRSYVFHPYSLVKDHRTGVE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
++ +VMDG ++ FI +YLK K
Sbjct: 303 VGNVYAVMDGAIDEFIAAYLKQK 325
>gi|403387502|ref|ZP_10929559.1| peptide chain release factor 2 [Clostridium sp. JC122]
Length = 325
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/324 (46%), Positives = 212/324 (65%), Gaps = 3/324 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD+ +AQE Q ++ DKI +++D + +L+ E ++ ++ +E
Sbjct: 3 EPTFWDDVNKAQEITQQSKNINDKIEKFKSLNLRVEDLEILTELSLEEENDES--YKEIK 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+KEL +D ++ LL+G YD+ A++++ GAGG DAQDW +ML RMY R+ E +
Sbjct: 61 KELKELRVIIDDLKVETLLNGEYDRNNAIVTLHTGAGGNDAQDWTEMLYRMYTRYCESKG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+K V++ +EAGIK ++V G YAYGYL EKG HR+VR SPFNA G RQTSF+G
Sbjct: 121 FKIEVIDYIPADEAGIKGVTLKVTGEYAYGYLKAEKGVHRLVRISPFNANGKRQTSFAGC 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L E S D+ I +DL+I RA G GGQ+VNK E+A+RITHIPTG+ V+C ERS
Sbjct: 181 EVLPELTE-SQDIDIKSDDLKIDTFRASGAGGQHVNKTESAIRITHIPTGIVVQCQSERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK AL LK+KL+ + E+ +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 240 QHTNKDYALKMLKSKLVDLKEQAHKEKIEDLAGEIKDNGWGSQIRSYVFHPYSLVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ET+++ SVMDG +E FI YLK
Sbjct: 300 GTETANVDSVMDGNIEEFITEYLK 323
>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/345 (44%), Positives = 232/345 (67%), Gaps = 3/345 (0%)
Query: 26 GLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVK 85
L+ ++++L EL+ + FW+++ +AQ+ T + DK+ L + + K++ ++
Sbjct: 2 NLEDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIE 61
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
L E +A ++ + IK L +++FE+ LLSG YD + A++S+ AG+GG +A D
Sbjct: 62 LLELEPDEEAK--QDLENEIKNLETLINKFEVESLLSGEYDSKNAIVSVQAGSGGVEACD 119
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
WA+MLLRMY+RW EK Y +V+ + AGIKSA V+G YAYGYL GE+G HR+VR
Sbjct: 120 WAEMLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRLVR 179
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF++ R TSF+ V+P + EE + V+I E+DL I RA G GGQ+VNK ++AVR
Sbjct: 180 ISPFDSNKRRHTSFAAVSVIPEIGEE-IKVEINEDDLRIDTFRASGAGGQHVNKTDSAVR 238
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITHIPTG+ V C ERSQ+ N+ KA+ LKAKL + E++ + K++ G+ + WG Q
Sbjct: 239 ITHIPTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWGSQ 298
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
IR+YVFHPY++VKD+RTG+ET +I +VMDGE++ F+++YLKYK S
Sbjct: 299 IRSYVFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYLKYKVS 343
>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
Length = 377
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 222/348 (63%), Gaps = 3/348 (0%)
Query: 20 EIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD 79
E+R S L K + EL+ + FW++ ++ + +Q ++KD + + + + +D
Sbjct: 20 EVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDTVQSYQELERQYED 79
Query: 80 AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
++++ E D L+ E +++E ++L+ + LLSG YD + A++ + AGAG
Sbjct: 80 IGVMIEMGNE--ENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSDNAILRLNAGAG 137
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
GT++ DW ML RM+ RW EK+ + V++ GEEAGIKS +++ G AYGYL EKG
Sbjct: 138 GTESCDWCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGPNAYGYLKSEKG 197
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 259
HR+VR SPFNA G RQTSF +VMP + EE +DV+I EEDL I R+ G GGQ++NK
Sbjct: 198 VHRLVRISPFNAAGKRQTSFVSCDVMPDI-EEDLDVEINEEDLRIDTYRSSGAGGQHINK 256
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
+A+RITH+PTG+ V+C ERSQ NK KA+ LKAKL ++ +++ A ++ IRGD +
Sbjct: 257 TSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAEKLSGIRGDVTE 316
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
WG QIR+YV PY +VKD RT ET ++ SV+DG L+ F+ +YL++
Sbjct: 317 IGWGNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYLRW 364
>gi|168182216|ref|ZP_02616880.1| peptide chain release factor 2 [Clostridium botulinum Bf]
gi|237793493|ref|YP_002861045.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
gi|182674541|gb|EDT86502.1| peptide chain release factor 2 [Clostridium botulinum Bf]
gi|229262967|gb|ACQ54000.1| peptide chain release factor 2 [Clostridium botulinum Ba4 str. 657]
Length = 325
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 212/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL GEKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINIFITQYLK 322
>gi|15672953|ref|NP_267127.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
Il1403]
gi|281491474|ref|YP_003353454.1| peptide chain release factor 2 [Lactococcus lactis subsp. lactis
KF147]
gi|385830507|ref|YP_005868320.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
CV56]
gi|418038086|ref|ZP_12676435.1| hypothetical protein LLCRE1631_01242 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|24638157|sp|Q9CGX1.1|RF2_LACLA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|12723911|gb|AAK05069.1|AE006331_9 peptide chain release factor 2 [Lactococcus lactis subsp. lactis
Il1403]
gi|281375192|gb|ADA64705.1| Peptide chain release factor 2 (RF-2) [Lactococcus lactis subsp.
lactis KF147]
gi|326406515|gb|ADZ63586.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
CV56]
gi|354693764|gb|EHE93497.1| hypothetical protein LLCRE1631_01242 [Lactococcus lactis subsp.
cremoris CNCM I-1631]
gi|374673029|dbj|BAL50920.1| peptide chain release factor RF-2 [Lactococcus lactis subsp. lactis
IO-1]
Length = 365
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 236/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E ++++ R S L++LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYAEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNNMLEEAQTMLEMLQE--EADEEMQAELEEMTIALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
AV+ I G+GGT++QDW ML+RMY RWGE +K +++ G+ AG+KS +
Sbjct: 124 HMNAVLEIHPGSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFV 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF++ R TSF+ +VMP L ++S++V + + D+++
Sbjct: 184 GRNAYGFLRGEKGVHRLVRISPFDSANRRHTSFTSVDVMPEL-DDSIEVDVRDADVKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ KA++ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD + WG QIR+YVF PY+LVKD RTG+ET I +VMDGEL+ FI +YL+
Sbjct: 303 QAEVDELRGDQSEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLR 362
Query: 367 YK 368
+
Sbjct: 363 WN 364
>gi|415720929|ref|ZP_11468173.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Bmash]
gi|388061190|gb|EIK83847.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Bmash]
Length = 373
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 240/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSSISKAIDIDSLKSTIADLEKQAAQPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++DA T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDAKTLIELGQE--EGDADSMSEAQEELGAIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 367
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 235/362 (64%), Gaps = 4/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ +E +R E IR + +L++EL +++ + FWD++ +A++ +Q +++
Sbjct: 4 LKSKIEELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEET 63
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + + + D + + T E D+ +LEE ++ L L + EL LSG D
Sbjct: 64 VNSIETLEKSLRDVEELSQTTPEEDTDTWAILEEE---MESLEDKLKELELKTYLSGEMD 120
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A ++I AGAGGT+A DWADML RMY RW E++ Y VV+ + + AGIKS + V+
Sbjct: 121 SKNAYLTIQAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLLVK 180
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGYL GE+G HR+VR SPF++ R TSF+ VMP + +E +++++ +EDL+I
Sbjct: 181 GPYAYGYLRGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQI-DEDINIEVRDEDLKIET 239
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ VNK +TAVR+THIPTG+ V C +ERSQ N+ KAL LKAKL + +++
Sbjct: 240 FRASGAGGQYVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQKL 299
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+ KQ G+ WG QIR+YVFHPY+LVKD+RTG+ET ++ +VMDG+++ FI+ +LK
Sbjct: 300 MEKRKQYEGEKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGFLK 359
Query: 367 YK 368
++
Sbjct: 360 WQ 361
>gi|291522080|emb|CBK80373.1| bacterial peptide chain release factor 2 (bRF-2) [Coprococcus catus
GD/7]
Length = 336
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/323 (45%), Positives = 211/323 (65%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN +A +++ L ++KD + +T +D T++++ E DA L+ E +
Sbjct: 7 FWDNADKANNSMKELKNLKDTVEEYHRLETAWEDVETLLEMGYE--ENDASLIPEVQEAM 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ K + + LLS YD + A++++ AGAGGT+A DW ML RMY RW EK + T
Sbjct: 65 ADFEKRFEHLRIKTLLSEEYDGDNAIVTLHAGAGGTEACDWVSMLFRMYTRWAEKHGFTT 124
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ GEEAGIKS +E+ G AYGY+ EKG HR+VR SPFNA G RQTSF+ +VM
Sbjct: 125 TVLDYLDGEEAGIKSVTVEIAGENAYGYMKSEKGIHRLVRISPFNAAGKRQTSFASCDVM 184
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +D++I E+DL I R+ G GGQ++NK +A+RITH+PT + V+C ERSQ
Sbjct: 185 PDI-EEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTNIVVQCQNERSQHM 243
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKL ++ +++ ++ IRG+ WG QIR+YV PYKLVKD RTG E
Sbjct: 244 NKDKAMQMLKAKLYLLKQQENQEKLSGIRGEVKDNAWGSQIRSYVMQPYKLVKDHRTGAE 303
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+S++ +VMDG+++ FI +YLK+
Sbjct: 304 SSNVDAVMDGDIDLFINAYLKWN 326
>gi|338814372|ref|ZP_08626393.1| peptide chain release factor 2 [Acetonema longum DSM 6540]
gi|337273694|gb|EGO62310.1| peptide chain release factor 2 [Acetonema longum DSM 6540]
Length = 335
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/330 (45%), Positives = 216/330 (65%), Gaps = 3/330 (0%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K FWD AQ+ +Q LT +KD + + +D T+ +L MD D
Sbjct: 1 MENKIQAPGFWDEPVGAQKVMQELTGLKDTAADYYAMRRRYEDMETLWRLG--MDEKDES 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ + +++L ++ ELT +LSG YD A++++ AGAGGT+AQDWA MLLRMYVR
Sbjct: 59 VYSDVTEAMQQLQAEIEHLELTLMLSGEYDANNAIVTLHAGAGGTEAQDWAQMLLRMYVR 118
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
W EKQ + ++ G+EAG+KSA + + GR AYGYL EKG HR+VR SPF+A G R
Sbjct: 119 WAEKQGFTVDTLDFLAGDEAGVKSATLLISGRNAYGYLRSEKGVHRLVRISPFDASGRRH 178
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ ++MP + +E++++ I DL++ RA G GGQ++NK ++AVR+THIPTG+ V+
Sbjct: 179 TSFAAVDIMPEI-DENVEIAINPADLKVDTYRASGAGGQHINKTDSAVRMTHIPTGIIVQ 237
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
C ERSQ+ N+ + + L+A+L + + ++A + +I G+ EWG QIR+YVFHPY L
Sbjct: 238 CQNERSQIQNREQCMKLLRARLFELEQRKQAEKKAEIGGEYQAIEWGSQIRSYVFHPYSL 297
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
KD RT ET +I +VMDGELE FI++YLK
Sbjct: 298 AKDHRTNCETGNIQAVMDGELEAFIEAYLK 327
>gi|337288092|ref|YP_004627564.1| hypothetical protein TOPB45_0534 [Thermodesulfobacterium sp. OPB45]
gi|334901830|gb|AEH22636.1| hypothetical protein TOPB45_0534 [Thermodesulfobacterium geofontis
OPF15]
Length = 378
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 234/362 (64%), Gaps = 8/362 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L K ++ D++E++R Q+LE +L ++E + ++ WD++ + ++ LQ + +
Sbjct: 12 DLEKLIKNFEDKLEDLRGCLEPQKLETKLIKIEEELQNNKDWDSQ-KIKKLLQERAQIFE 70
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDA--GLLEEAASIIKELNKALDQFELTQLLSG 123
KI++L + + K + + L +E S D LLEE S K E LLSG
Sbjct: 71 KISILENLERKFKEILEWYSLYKEEKSFDILNTLLEELTS----FEKTFKTEETKLLLSG 126
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD A++SI AG GGTDAQDWA +LLRMYV+W EK+ YK ++V+ GEEAGIK+AV+
Sbjct: 127 EYDSSSAILSIHAGTGGTDAQDWASILLRMYVKWAEKKGYKVKIVDILPGEEAGIKNAVL 186
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
+EG AYGYL GEKG HR++R SPFNA R TSF+ V+P + EE ++V+I EDL+
Sbjct: 187 LIEGEKAYGYLKGEKGIHRLIRISPFNANSKRHTSFASVTVIPQI-EEDIEVEIRPEDLK 245
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I RA G GGQ+VNK ETAVRITHIPTG+TV C ERSQ NK+ AL L+++L + +
Sbjct: 246 IETMRASGHGGQHVNKTETAVRITHIPTGITVTCQNERSQYLNKMTALKILRSRLYQLEK 305
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
++ S+ + + G+ + WG QIR Y HPYK+VKD RT +E+ + ++DGE++ FI+
Sbjct: 306 QKLESKKESLIGEKKEISWGNQIRTYTLHPYKVVKDHRTQYESYKVEEILDGEIDDFIRE 365
Query: 364 YL 365
YL
Sbjct: 366 YL 367
>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
Length = 328
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/330 (45%), Positives = 213/330 (64%), Gaps = 3/330 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ +AQ + +K++++ D DD +L E D T+ L E
Sbjct: 2 ADPDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTE--LASEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S + L + ++QFEL LLS PYDK A++ + GAGGT++QDWA MLLRMY RW EK+
Sbjct: 60 ESGLAALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ ++ GEEAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFAVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP L ++++D+++ EDL+I RA G GGQ+VN ++AVRITH+PT V C ER
Sbjct: 180 CEVMPEL-DDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ +KAKL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
TG E + SVMDGE++ FI +YL+ +M
Sbjct: 299 TGFEIGNTNSVMDGEIDGFIDAYLRQSLAM 328
>gi|357590811|ref|ZP_09129477.1| peptide chain release factor 2 [Corynebacterium nuruki S6-4]
Length = 374
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 239/369 (64%), Gaps = 7/369 (1%)
Query: 7 LRKDVEAASDRVEE----IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
++ DV AA D ++ I L +L+ ++ ELE +A+D S WD+ AQ+ L+
Sbjct: 1 MQPDVTAAIDDIDSTLTTIEKVLDLDELDAQVRELEAQASDPSLWDDPDHAQQVTSKLSH 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI-IKELNKALDQFELTQLL 121
V+ ++ + ++++DD + ++ EE + DA +E A + EL +A+D E+T +L
Sbjct: 61 VQGRLKKVRGLRSRLDDLPVMYEMAEESEGEDAAEAKELADAELAELKEAVDSLEVTTML 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
SG YD AV++I + AGG DA DWA+ML+RMY RW EK +K V + S EEAGIKSA
Sbjct: 121 SGEYDDREAVVNIRSAAGGVDAADWAEMLMRMYTRWAEKHGHKVEVYDISYAEEAGIKSA 180
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
V G Y YG LS E+GTHR+VR SPF+ +G RQTSF+ EV+P++ E+S V I E +
Sbjct: 181 TFVVHGDYMYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQSDHVDIDENE 239
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
+ + R+ G GGQ+VN ++AVR+THIPTG+ V C E+SQ+ NK A+ L AKLL
Sbjct: 240 VRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLER 299
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
++ A+E+ +RGD + WG Q+R+YV HPY++VKD+RT +E +D V+DG+++ F+
Sbjct: 300 KRQEEAAEMDALRGDGSNS-WGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGFL 358
Query: 362 KSYLKYKYS 370
++ ++++ +
Sbjct: 359 EAGIRWRMA 367
>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
gi|166225119|sp|A5IM04.1|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
petrophila RKU-1]
Length = 367
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 233/363 (64%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ R +E + ++I + ++++E+ E+E K D S WD++ +A+E Q L +K
Sbjct: 4 FETRTRMEELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 120 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATIL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 180 IKGEYAYGYLKHESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 239 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+YVFHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 299 KKQREIQEIQGELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LVY 361
>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
Length = 346
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/340 (45%), Positives = 217/340 (63%), Gaps = 4/340 (1%)
Query: 29 QLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE 88
+LE E A +E + A S FWD++ A+ Q L +K ++ ++++ + K D+ +L
Sbjct: 8 ELESEKAAIEKEMAQSGFWDDKENARHKSQRLDKLKKRLKVISELEEKFDEIEIYQQLAA 67
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
E L EE +L K LD EL L+ PYD A++SI GAGGT++QDWA+
Sbjct: 68 E---EGENLREELEQSFSQLEKKLDNLELKLRLNEPYDDHNAILSIHPGAGGTESQDWAE 124
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
MLLRMY RW E Y+ +E S G+EAG+KS + + G YA+GYL GE+G HR+VR SP
Sbjct: 125 MLLRMYRRWAESSGYQLETLEFSAGDEAGVKSVTLLISGDYAFGYLKGERGVHRLVRISP 184
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
F++ G R TSF+ +V+P L +E ++V I E DL I RA G GGQ+VNK ++AVRITH
Sbjct: 185 FDSSGRRHTSFASVDVLPELDDE-LEVDIDENDLRIETYRASGAGGQHVNKTDSAVRITH 243
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
PTGV V+C +RSQ NK A+ L +KLL + EE +A +I+ +RG+ + WG QIR+
Sbjct: 244 QPTGVVVQCQSQRSQHKNKNVAMKILSSKLLELKEEAQAEKIEDLRGEHKEIAWGSQIRS 303
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
YV HPY ++KD RT E ++ V+DG L+ FI+ YLKYK
Sbjct: 304 YVLHPYNMIKDHRTDFEEGNVDKVLDGYLDEFIEEYLKYK 343
>gi|226947396|ref|YP_002802487.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
Kyoto]
gi|226842678|gb|ACO85344.1| peptide chain release factor 2 [Clostridium botulinum A2 str.
Kyoto]
Length = 325
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/324 (45%), Positives = 212/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL GEKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FTIKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
E++P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EILPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINIFITQYLK 322
>gi|365851223|ref|ZP_09391663.1| peptide chain release factor 2 [Lactobacillus parafarraginis F0439]
gi|363717255|gb|EHM00635.1| peptide chain release factor 2 [Lactobacillus parafarraginis F0439]
Length = 368
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 217/333 (65%), Gaps = 3/333 (0%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWDN+ AQ+ + +K K + T ++++D +L E D DAG+
Sbjct: 34 ESKMAEPGFWDNQEAAQKLIDETNQMKTKKDNFTKLASELEDLKVTFELIE--DDPDAGM 91
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRW 157
+ + ++L K LDQ++L LL+G YD A++ I GAGGT+AQDW MLLRMY RW
Sbjct: 92 QNDFVTEAEKLKKQLDQYQLGLLLNGRYDHNNAILEIHPGAGGTEAQDWGSMLLRMYTRW 151
Query: 158 GEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQT 217
E +K V++ +G+ AGI S + + G AYGYL EKG HR+VR SPF++ G R T
Sbjct: 152 AEAHHFKVDVLDYQVGDVAGINSVSVLISGENAYGYLRSEKGVHRLVRISPFDSAGRRHT 211
Query: 218 SFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRC 277
SF+ +VMP L ++ +++ I +DL + R+ G GGQ++NK +AVRITHIPTG+ V
Sbjct: 212 SFASVDVMPELNDD-VEININPDDLRVDVYRSSGAGGQHINKTSSAVRITHIPTGIVVAS 270
Query: 278 TEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLV 337
+RSQL N+ A++ LK+KL + ++++A E +I G+ + WG QIR+YVFHPY +V
Sbjct: 271 QAQRSQLQNRQTAMNMLKSKLYELEQQKKAEEKAKIEGEQLDIGWGSQIRSYVFHPYSMV 330
Query: 338 KDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
KD RT +ETS++ VMDG+L+PFI +YL+++ S
Sbjct: 331 KDHRTNYETSNVDGVMDGDLDPFINAYLQWQLS 363
>gi|134300908|ref|YP_001114404.1| peptide chain release factor 2 [Desulfotomaculum reducens MI-1]
gi|134053608|gb|ABO51579.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfotomaculum
reducens MI-1]
Length = 332
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/322 (46%), Positives = 213/322 (66%), Gaps = 3/322 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +Q+ Q L +KD++ ++ + D +++L +E D L EE +S +
Sbjct: 6 FWDDLTYSQKVSQKLAGLKDRVAAFNTLESSLQDLEVMLELCQE--EQDPLLEEEFSSEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
L L++ EL +L+GPYD+ A++S+ GAGGT++QDWA MLLRMY R+ E YK
Sbjct: 64 STLTGRLEEMELEIMLAGPYDRGDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHNYKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+++ G+EAGIKSA I+V G AYGYL EKG HR+VR SPF+A G R TSF+ +V+
Sbjct: 124 EILDLLPGDEAGIKSATIQVTGPNAYGYLRCEKGVHRLVRISPFDAAGRRHTSFASVDVL 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
PL+ +E ++V I EDL I RAGG GGQ+VNK ++AVRITH+PTG+ V C ERSQ
Sbjct: 184 PLVDDE-VEVNIRPEDLRIDTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTT 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ LK+KL+ + +++ E+ +RG+ WG QIR+YVFHPY L KD RTG E
Sbjct: 243 NRQAAMKLLKSKLIDLELQKKEDEMAALRGEQKDIAWGSQIRSYVFHPYSLAKDHRTGEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKY 367
T ++ +VMDG + F+ +YLKY
Sbjct: 303 TGNVNAVMDGNIGQFVTAYLKY 324
>gi|331270416|ref|YP_004396908.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
gi|329126966|gb|AEB76911.1| peptide chain release factor 2 [Clostridium botulinum BKT015925]
Length = 327
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/326 (47%), Positives = 221/326 (67%), Gaps = 7/326 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT--EEMDSTDAGLLEE 100
+S+FWD+ +AQE Q +KD+I+ ++ K +++D +++++ E+ +S+ +L E
Sbjct: 3 ESNFWDDINKAQEVTQEAKGLKDRIDKYSNTKNRLEDLKILIEMSIEEDDESSVEEILNE 62
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
+KE+ +D+F + LLSG YDK A++S+ AGAGGTDAQDW +MLLRMY RW E
Sbjct: 63 ----VKEIQIIIDEFRVQILLSGEYDKNNAIVSLHAGAGGTDAQDWTEMLLRMYTRWSET 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ YK ++ G+EAGIKSA +++ G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 119 KGYKVETLDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
E++P L ES D++I +DL I RA G GGQ++NK ++AVRITHIPTG+ V+ E
Sbjct: 179 SLEILPELT-ESQDIEIKSDDLRIDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSE 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY +VKD
Sbjct: 238 RSQFQNKDTAMSMLKSKLVELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDH 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
RT E ++ +VMDG+++ FI YLK
Sbjct: 298 RTNTEMGNVEAVMDGDIDIFIIEYLK 323
>gi|415727369|ref|ZP_11471467.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Dmash]
gi|388062266|gb|EIK84884.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Dmash]
Length = 380
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 240/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF +DVE+ + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALRDVES---KYASIEKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L ++DD T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIDDTKTLIELGQE--EGDADSMSEAQDELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ + A
Sbjct: 358 AGIRWRHEQRVEA 370
>gi|183602511|ref|ZP_02963876.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219683556|ref|YP_002469939.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis AD011]
gi|241190585|ref|YP_002967979.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|241195991|ref|YP_002969546.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|384190832|ref|YP_005576580.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
animalis subsp. lactis BB-12]
gi|384191974|ref|YP_005577721.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|384193583|ref|YP_005579329.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis BLC1]
gi|384195141|ref|YP_005580886.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis V9]
gi|387820453|ref|YP_006300496.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis B420]
gi|387822124|ref|YP_006302073.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis Bi-07]
gi|423679110|ref|ZP_17653986.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|183218152|gb|EDT88798.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis HN019]
gi|219621206|gb|ACL29363.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis AD011]
gi|240248977|gb|ACS45917.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis Bl-04]
gi|240250545|gb|ACS47484.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis DSM 10140]
gi|289178324|gb|ADC85570.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
animalis subsp. lactis BB-12]
gi|295793572|gb|ADG33107.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis V9]
gi|340364711|gb|AEK30002.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
animalis subsp. lactis CNCM I-2494]
gi|345282442|gb|AEN76296.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis BLC1]
gi|366041612|gb|EHN18103.1| peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis BS 01]
gi|386653154|gb|AFJ16284.1| Peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis B420]
gi|386654732|gb|AFJ17861.1| Peptide chain release factor 2 [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 377
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/369 (41%), Positives = 243/369 (65%), Gaps = 4/369 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + +L+ + AELE +A+ WD+ AQ+ + L+ +
Sbjct: 4 FDYSQAISDARAKYESIALALDTDRLKSQEAELEQQASAPGLWDDSEHAQKVMSQLSACQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L+ +++DD T+++L +E DA L EA + I+ + K LDQ E+ L+ G
Sbjct: 64 SQLKHLSSAASRLDDVATLIELGQE--ENDADTLHEAQTEIESIQKDLDQMEIETLMDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 122 YDSRSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++ YAYG +S E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + +++P+ ++ +
Sbjct: 182 IDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIEVPDSEIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCASGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDEFIQAG 359
Query: 365 LKYKYSMSL 373
+++++ L
Sbjct: 360 IRWRHEQRL 368
>gi|317497043|ref|ZP_07955371.1| peptide chain release factor 2 [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895703|gb|EFV17857.1| peptide chain release factor 2 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 333
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 216/322 (67%), Gaps = 3/322 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN E+Q ++ + +K + D KTK +D T++ + EE DA L+EEA +++
Sbjct: 6 FWDNVEESQNVMKEVKSLKGVVEEYDDLKTKYEDIETLIDMAEE--DEDADLIEEATALM 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
E K ++ ++ LL+G YDK+ A++++ AGAGGT++ DWA ML RM+ RW K+ Y T
Sbjct: 64 DEFEKTYEELRISTLLTGEYDKDDAILTLHAGAGGTESCDWAGMLYRMFTRWAGKKGYGT 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS +++ G AYGYL EKG HR+VR SPFNA G RQTSF+ +VM
Sbjct: 124 EVLDYLDGDEAGIKSVTVKITGMNAYGYLRSEKGVHRLVRISPFNAAGKRQTSFASCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++ ++V+I +ED+ I RA G GGQ++NK ++A+RITH+PTG+ V+C ERSQ
Sbjct: 184 PDIKDD-IEVEIADEDIRIDTYRASGAGGQHINKTDSAIRITHLPTGIVVQCQNERSQHK 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK +A+ LK KL ++ ++Q ++ IRGD WG QIR+YV PY +VKD RT E
Sbjct: 243 NKDQAMKMLKTKLYLLKQQQHLEKLSDIRGDVGDNGWGNQIRSYVLQPYTMVKDHRTNFE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKY 367
+ + +V+DG+L+ F+ +YL +
Sbjct: 303 SGNPSAVLDGDLDGFMNAYLAW 324
>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
Length = 372
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 164/373 (43%), Positives = 236/373 (63%), Gaps = 10/373 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E ++R EE++ S L +++EL EL+ A S W+ + +A++ LQ +++
Sbjct: 5 IRTKLEELTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEEN 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKA---LDQFELTQLLSG 123
I L + + D ++ +TEE D LL+E EL KA + E+ LSG
Sbjct: 65 IQQLEATEKVLSDIRELLHITEEEDLETQTLLKE------ELEKAEQMIKDMEIRAFLSG 118
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
D + A ++I AGAGG +A DWA MLLRMY RW EK Y+ VV+ + + AGIKSA +
Sbjct: 119 EMDAKNAYLTIQAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATL 178
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
++G YAYGYL GE G HR+VR SPF+A R TSF+ V+P + +ES++++I EED+E
Sbjct: 179 LIKGPYAYGYLKGESGVHRLVRISPFDANARRHTSFASVTVVPQI-DESINIEIREEDIE 237
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ RA G GGQ VNK +TAVRI H PTG+ V C +ERSQ N++KAL LKAKL +
Sbjct: 238 METFRASGAGGQYVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKL 297
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
++ + + + G+ + WG QIR+YVF PY+LVKD+RTG E D+ SVMDGE++PFI++
Sbjct: 298 QELEEKKRALEGEKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEA 357
Query: 364 YLKYKYSMSLSAS 376
YL++K AS
Sbjct: 358 YLRWKAKQEAQAS 370
>gi|297583381|ref|YP_003699161.1| hypothetical protein [Bacillus selenitireducens MLS10]
gi|297141838|gb|ADH98595.1| hypothetical protein Bsel_1077 [Bacillus selenitireducens MLS10]
Length = 366
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 228/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++ +V+ + R+ + R S L + E ++A LE + AD SFWDN+ EAQ+ + +K
Sbjct: 6 MKAEVQNMATRLADFRGSLDLDEKEAQIASLEDRMADPSFWDNQEEAQKVIGEANALKSY 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + +D L EE D ++ + + I++L K L+QFEL LLSGPYD
Sbjct: 66 AHTYRELEAAHEDLEVQFGLLEE--ENDPEMMADLEAGIEDLQKRLNQFELQLLLSGPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QD+A MLLRMY R+ E+ +K ++ G+EAG+KS +++
Sbjct: 124 ANNAILELHPGAGGTESQDYASMLLRMYTRFAEQMNWKVETLDYLPGDEAGVKSVTLQIT 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG+L EKG HR+VR SPF++ G R TSF +VMP L E+ +++ + ++L I
Sbjct: 184 GHNAYGHLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVMPELNED-IEIDVKPDELRIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+ G GGQ+VN ++AVR+TH+PT V C ERSQ+ N+ KA+ LKAKL + E++
Sbjct: 243 FRSSGAGGQHVNTTDSAVRMTHLPTNTIVSCQSERSQIKNREKAMKMLKAKLFQLEIERQ 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG+L PFI +YL+
Sbjct: 303 RQEADEIRGEQSEIGWGSQIRSYVFHPYNMVKDHRTNKETGNTQAVMDGDLMPFIDAYLR 362
>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|418045638|ref|ZP_12683733.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|238688848|sp|B1LB88.1|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|351676523|gb|EHA59676.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
Length = 367
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 232/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S WD++ +A+E Q L +K
Sbjct: 4 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 120 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATIL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 180 IKGEYAYGYLKHESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 239 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 299 KKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LVY 361
>gi|334336533|ref|YP_004541685.1| peptide chain release factor 2 [Isoptericola variabilis 225]
gi|334106901|gb|AEG43791.1| Peptide chain release factor 2 [Isoptericola variabilis 225]
Length = 371
Score = 307 bits (787), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/374 (41%), Positives = 246/374 (65%), Gaps = 7/374 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF K + A D +E + LQ+ ++A L +A+ WD+ +AQ AL+
Sbjct: 5 DFPAEIKALRATLDSIEAVSDPTALQE---KIARLSEQASAPDLWDDPEKAQSVTSALSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ + + ++DD T+V++ +EMD DA L EA + I + K LD E+ LL+
Sbjct: 62 TQGELERVKKLRQRIDDVETLVEMGQEMD--DADTLVEAETEIAAIRKDLDVLEVRTLLN 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I AGAGG DA D+A+MLLRMY+RW E+ Y T V++ S EEAG+KSA
Sbjct: 120 GEYDAREAVVTIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTSVLDTSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
EV+ YA+G+LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IPE ++
Sbjct: 180 FEVKAPYAFGHLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDHIEIPESEI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+ G GGQ+VN ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL+
Sbjct: 239 KVDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQR 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+++ A++ K++ GD +KA WG Q+R+YV PY++VKD+RT HE+ + +V DG ++ FI+
Sbjct: 299 QQEEAAKKKELAGD-IKASWGDQMRSYVLQPYQMVKDLRTEHESGNPAAVFDGAIDDFIE 357
Query: 363 SYLKYKYSMSLSAS 376
+ ++++ S A+
Sbjct: 358 AGIRWRRSQGADAA 371
>gi|187777237|ref|ZP_02993710.1| hypothetical protein CLOSPO_00784 [Clostridium sporogenes ATCC
15579]
gi|187774165|gb|EDU37967.1| peptide chain release factor 2 [Clostridium sporogenes ATCC 15579]
Length = 325
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 217/327 (66%), Gaps = 4/327 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK++ K ++D I+ L++ + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLSKYNHLKNTIED---IIGLSQMLSEEDDDMGKEIL 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + +D+F++ LLSG YD+ A++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEEIDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL GEKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FTVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKGEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHIPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK++L+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSRLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYKY 369
G ETS++ +VM+G++ FI YLK +
Sbjct: 299 GAETSNVDAVMNGDINIFIIEYLKGNF 325
>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
gi|415708622|ref|ZP_11462636.1| peptide chain release factor 2 [Gardnerella vaginalis 6420LIT]
gi|415710294|ref|ZP_11463683.1| peptide chain release factor 2 [Gardnerella vaginalis 6420B]
gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
gi|388054521|gb|EIK77459.1| peptide chain release factor 2 [Gardnerella vaginalis 6420LIT]
gi|388055534|gb|EIK78435.1| peptide chain release factor 2 [Gardnerella vaginalis 6420B]
Length = 378
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 241/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFSQALNDVEA---KYSLISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L EE DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGEE--EGDADSMNEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|7388057|sp|Q9X1R5.1|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
Length = 369
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 232/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S WD++ +A+E Q L +K
Sbjct: 6 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLK 65
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 66 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 122 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATIL 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 182 IKGEYAYGYLKHESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKI 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 241 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 301 KKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 360
Query: 365 LKY 367
L Y
Sbjct: 361 LVY 363
>gi|400289919|ref|ZP_10791946.1| peptide chain release factor 2 [Streptococcus ratti FA-1 = DSM
20564]
gi|399920710|gb|EJN93527.1| peptide chain release factor 2 [Streptococcus ratti FA-1 = DSM
20564]
Length = 336
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 226/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FWD+ AQ+T Q L D+K K + + ++ D+A + +L +E
Sbjct: 1 MEEEIALLENRMTEPDFWDDNLSAQKTSQELNDLKLKYDTFHNMESLSDEAEILYELADE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
S A L + +++L+K + +E+T LLS PYD A++ I G+GGT+AQDW DM
Sbjct: 61 EPSMQADLEDS----LEKLDKMMSSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGSSKHFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V I +ED+++ R+GG GGQNVNKV T VR+TH+
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHV 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG+L+ FI ++LK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFIDAFLKWR 334
>gi|115311854|sp|Q4L4H9.2|RF2_STAHJ RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 371
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 230/367 (62%), Gaps = 4/367 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S + E + E E + FWD++ +AQ+ + +K
Sbjct: 6 IKRNIDEYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSV 65
Query: 67 INLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+N + + +++D T L EE+D LE+ KE +DQFEL LL GP+
Sbjct: 66 VNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKE---KVDQFELQLLLDGPH 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ + GAGGT++QDWA MLLRMY R+GE+Q +K V+ G+EAG+KS + +
Sbjct: 123 DANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 183 KGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVD 242
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++NK E+A+RITH PTG+ V ERSQ+ N+ A+ LKAKL + E+
Sbjct: 243 TFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEE 302
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDGE+ PFI+SYL
Sbjct: 303 QEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYL 362
Query: 366 KYKYSMS 372
+Y + S
Sbjct: 363 RYTMNQS 369
>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
Length = 378
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 241/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF + DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFSQVLNDVEA---KYSSISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|238063024|ref|ZP_04607733.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
gi|237884835|gb|EEP73663.1| peptide chain release factor 2 [Micromonospora sp. ATCC 39149]
Length = 373
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 234/358 (65%), Gaps = 4/358 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L +L ++ A LE +A+ WD++A+AQ+ L+ V +I+ L ++++DDA
Sbjct: 20 IEAVLDLDRLHEDKARLEEQASAPDLWDDQAKAQQVTSQLSYVNGEIDKLGSLRSRLDDA 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+++L E D D G+L E + I L K++ E+ LLSG YD A+++I AGAGG
Sbjct: 80 RVLLELAEAED--DPGVLAEVETEIGALTKSIQDMEVRTLLSGEYDSREALVAIRAGAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA V+ YAYG LS E GT
Sbjct: 138 VDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTLSVESGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G EV+P+ E++ + IPE ++ + R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAGVEVLPVT-EQTDHIDIPENEVRVDVYRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG+ V C E+SQL NK AL L+A+LL ++ +++ ++ DA +
Sbjct: 257 DSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERKRQEEQAKLNGLKTDAAGS 316
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
WG Q+R+YV HPY++VKD+RT ET + +V DGEL+ FI++ ++++ L+ A
Sbjct: 317 -WGDQMRSYVLHPYQMVKDLRTEQETGNPSAVFDGELDSFIEAGIRWRKQRQLAGDAA 373
>gi|221633612|ref|YP_002522838.1| peptide chain release factor 2, programmed frameshift
[Thermomicrobium roseum DSM 5159]
gi|254790922|sp|B9L0E3.1|RF2_THERP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|221155396|gb|ACM04523.1| peptide chain release factor 2, programmed frameshift
[Thermomicrobium roseum DSM 5159]
Length = 374
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 227/356 (63%), Gaps = 5/356 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E +R++ I L +++ +LE +AAD W + AQ L+ L+ ++D +
Sbjct: 8 DLEELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQE 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ D + + L + D AG +E+ A+ EL + + Q EL LL+G YD
Sbjct: 68 WETLSQQARDLLELRALASD-DLELAGQVEQEAT---ELAERVRQLELRLLLTGQYDGHD 123
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
A++++ AG GG DAQDWA+MLLRMY+RW ++ + VV+ GEEAGIKSA +EV G Y
Sbjct: 124 AILAVHAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPY 183
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL GE GTHR+VR SPF+A R TSF+ EV+PL+ EE DV+I EED+ I RA
Sbjct: 184 AYGYLKGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLV-EEDDDVEIREEDIRIDTFRA 242
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKA+LL + QR E
Sbjct: 243 SGHGGQHVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEE 302
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++G V WG +IR+YV HPY +V D RT T +I +V++GE++PFI++YL
Sbjct: 303 QARLKGKPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358
>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
Length = 369
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 160/368 (43%), Positives = 225/368 (61%), Gaps = 2/368 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + Y LR+ ++ ++ I + ++L E+ E+E + + +FWD+ +AQE + L
Sbjct: 1 MAEIYELREIIKELDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+D KD T FK ++ D ++ + EE + D L E I+ L K + F++
Sbjct: 61 SDKKDNFKTFTSFKEELKDQSDLLDIIEESNE-DLESLNEIEEILNSLKKEIGSFKIKTE 119
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L G YDK A + I AGAGG +A DWA+ML+RMY R+ EK+ +K V + + E GIKS
Sbjct: 120 LDGEYDKNNAYLVIHAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKS 179
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A I V+G +AYGYL GEKG HR+VR SPF++ R TSF+ ++ P L ++ M V+I +
Sbjct: 180 ATIHVKGSFAYGYLKGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDD-MSVEIDPK 238
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ+VNK ++AVRITHIPTGV ERSQ NK A+ L AKL
Sbjct: 239 DLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQ 298
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I EE+ +I+ I+G+ + WG QIR+YVFHPY LVKD RT E ++ SVMDG+++ F
Sbjct: 299 IKEEEHREKIEDIQGNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGF 358
Query: 361 IKSYLKYK 368
I YL K
Sbjct: 359 IDEYLANK 366
>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
Length = 378
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 240/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFSQALNDVEA---KYSSISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|152967725|ref|YP_001363509.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
gi|226726318|sp|A6WEK6.1|RF2_KINRD RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151362242|gb|ABS05245.1| peptide chain release factor 2 [Kineococcus radiotolerans SRS30216]
Length = 367
Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 230/348 (66%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
IR + L L KELA+L +AA S WD+ AQ L+ V+ +++ + ++DD
Sbjct: 19 IREVSDLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKMGGRIDDL 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L+E D DA L EA + + E+ + L Q E+ LLSG YD A+++I + AGG
Sbjct: 79 EVLVELSE--DEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIRSEAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ML+RMY+RW E++ YK+ V + S EEAGIKSA +V YAYG LS E+GT
Sbjct: 137 VDAADFAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLSVEQGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G EV+P++ E V +PE ++ + R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAGVEVLPVVAETDH-VDVPENEVRVDVYRSSGPGGQSVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+TH+PTG+ V C E+SQL NK A+ L+AKLL A + R +E+ ++GD
Sbjct: 256 DSAVRLTHLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGDD-SG 314
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV HPY++VKD+RT +E + S+ DGE++ F+++ ++++
Sbjct: 315 SWGNQMRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWR 362
>gi|292669366|ref|ZP_06602792.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
gi|292649001|gb|EFF66973.1| peptide chain release factor RF2 [Selenomonas noxia ATCC 43541]
Length = 368
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 239/363 (65%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K + SFWD+ A AQ+ Q L D+K
Sbjct: 4 DLKPILNDLGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ D K +DA T+ ++ ++ DA + + + + +++ L+ +L LLSG Y
Sbjct: 64 GVDTYRDLVAKYEDAETLYEMG--IEENDASMEADIRAELTLISEGLETLQLEVLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + +
Sbjct: 122 DANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 182 KGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E+
Sbjct: 241 YFRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDG+++PFI++YL
Sbjct: 301 KEEEIARLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYL 360
Query: 366 KYK 368
K
Sbjct: 361 NAK 363
>gi|415883540|ref|ZP_11545569.1| Protein chain release factor B [Bacillus methanolicus MGA3]
gi|387591335|gb|EIJ83652.1| Protein chain release factor B [Bacillus methanolicus MGA3]
Length = 327
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/323 (47%), Positives = 216/323 (66%), Gaps = 7/323 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAAS 103
FWD++ +AQ + +KD +N D M++ + ++LT E+ + DA L EE
Sbjct: 6 FWDDQQKAQAIINEANGLKDLVNEFND----MNETLENLELTYELVKEENDAELQEELEK 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRY 163
+K+L K ++QFEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+ +
Sbjct: 62 ELKDLTKRVNQFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121
Query: 164 KTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAE 223
K ++ GEEAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF E
Sbjct: 122 KVETLDYLPGEEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCE 181
Query: 224 VMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQ 283
VMP +E ++++I EDL+I R+ G GGQ+VN ++AVRITHIPTG+ V C ERSQ
Sbjct: 182 VMPEFNDE-IEIEIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQTERSQ 240
Query: 284 LANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG 343
+ N+ +A++ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY LVKD RT
Sbjct: 241 IKNRERAMNMLKAKLYQKKIEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300
Query: 344 HETSDIVSVMDGELEPFIKSYLK 366
E ++ +VMDGE++PFI +YL+
Sbjct: 301 VEIGNVQAVMDGEIDPFINAYLR 323
>gi|415724069|ref|ZP_11469756.1| peptide chain release factor 2 [Gardnerella vaginalis 00703C2mash]
gi|388063003|gb|EIK85601.1| peptide chain release factor 2 [Gardnerella vaginalis 00703C2mash]
Length = 373
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 240/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSSISKAIDIDSLKSTIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + ++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQSIEDTKTLIELGQE--EGDADSMSEAQEELGAIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
gi|419760522|ref|ZP_14286797.1| peptide chain release factor 2 [Thermosipho africanus H17ap60334]
gi|226739131|sp|B7IE81.1|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
gi|407514360|gb|EKF49187.1| peptide chain release factor 2 [Thermosipho africanus H17ap60334]
Length = 369
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 232/365 (63%), Gaps = 6/365 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M DF L++ ++ A + E+I + KEL ELE + DS FW ++ +A+E Q
Sbjct: 1 MIDF-ELKQKIDEAKKKFEDIIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKA 59
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++ I+ + D + K +D ++L++E D +E +++E+ K + FEL +
Sbjct: 60 QRIRKIIDDMKDIEAKFEDLDAAIELSDE----DQSFVETIKEMVEEIEKKVKTFELELI 115
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+G +D A ++I GAGGT++QDWA MLLRMY+RW E++ + ++V+ GEEAGIKS
Sbjct: 116 LNGKFDASNAYLTIHPGAGGTESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKS 175
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A+I ++G YAYGYL E+G HR+VR SPF+A R TSF+ V+P + ++ PE
Sbjct: 176 AMIYIKGDYAYGYLKYERGVHRLVRISPFDANKRRHTSFASVNVIPEIDDDIDIEINPE- 234
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ VNK E+AVRITHIPTG+ V C ERSQL NK AL LKA+L
Sbjct: 235 DLRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQ 294
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ E+R ++++I+G+ WG QIR+YVF PY +VKD RT ET +I +VMDGE++ F
Sbjct: 295 LELEKRQKQLEEIQGELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIF 354
Query: 361 IKSYL 365
I+S L
Sbjct: 355 IESEL 359
>gi|282882039|ref|ZP_06290680.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
gi|300814941|ref|ZP_07095169.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|281298069|gb|EFA90524.1| peptide chain release factor 2 [Peptoniphilus lacrimalis 315-B]
gi|300510911|gb|EFK38183.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 370
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 235/365 (64%), Gaps = 3/365 (0%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q+ Y ++ +E A ++E+ S + L ++ EL K + +FWD+ +AQ+ ++ L
Sbjct: 3 QNIYLDKEKLENAISSLDELALSLDVNGLRDKIKELNKKQMEQNFWDDNEKAQKIIKELN 62
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+ K+N + ++DA I+ L E D D +E +I + K + +++L LL
Sbjct: 63 SYQRKVNPYDEISDLIEDANDILLLMEMED--DYSSYDEFKKLILNIEKKVSEYKLETLL 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
+G +D+ A++SI AGAGGT+AQDWA MLLRMYVR+ + +K ++ +EAGIKS
Sbjct: 121 NGEFDENDAILSIHAGAGGTEAQDWASMLLRMYVRYATNKGFKVETLDILKEDEAGIKSV 180
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
+++ G +AYG+L GEKG HR+VR SPF+A R TSFS +V P + + ++I +ED
Sbjct: 181 TLKISGEHAYGFLKGEKGVHRLVRISPFDANKRRHTSFSSVDVFPDIDGDID-IEIKDED 239
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
L+I R+ G GGQ+VN ++AVRITHIPTG+ V+C ERSQ+ N+ +A+ LKAKLL +
Sbjct: 240 LKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQIQNRERAMQTLKAKLLAL 299
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
AEE+R +I ++G+ + WG QIR+YVF PY LVKD RT E D+ VMDG+L+PFI
Sbjct: 300 AEEERKEKIDDLQGNYSQIAWGSQIRSYVFQPYTLVKDHRTNCEVGDVNKVMDGDLDPFI 359
Query: 362 KSYLK 366
+YL+
Sbjct: 360 NAYLQ 364
>gi|225375950|ref|ZP_03753171.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
16841]
gi|225212203|gb|EEG94557.1| hypothetical protein ROSEINA2194_01587 [Roseburia inulinivorans DSM
16841]
Length = 338
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 209/325 (64%), Gaps = 3/325 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW++ +Q ++ L +KD + T+ DD T++++ E DA L+ E
Sbjct: 3 DGDFWNDPVVSQNKMKTLKSMKDDVATYEKLATQFDDIETLIEMGYE--ENDASLIPEIE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
++ E D + LLSG YD + A++S+ AGAGGT++ DWA ML RMY +W + +
Sbjct: 61 EMLNEFVTTFDNIRIKTLLSGEYDGDNAILSLHAGAGGTESCDWAQMLFRMYSKWADSRG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y+ V++ G+EAGIKS ++ G AYGYL EKG HR+VR SPFNA G RQTSF
Sbjct: 121 YELVVLDSLDGDEAGIKSITFQINGENAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
+VMP + EE +D++I E+DL I R+ G GGQ++NK +A+RITH+PTG+ V+C ERS
Sbjct: 181 DVMPDI-EEDLDIEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK KA+ LKAKL ++ E++ A + IRG+ + WG QIR+YV PY +VKD RT
Sbjct: 240 QHQNKDKAMQMLKAKLYLLKEQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLKY 367
G ET ++ SVMDG+++ FI YLK+
Sbjct: 300 GVETGNVDSVMDGKIDLFINGYLKW 324
>gi|373253623|ref|ZP_09541741.1| peptide chain release factor 2 [Nesterenkonia sp. F]
Length = 372
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 235/342 (68%), Gaps = 4/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L ++AEL +AA W+++ AQ+ L+ + ++N LT ++++DD T+V++
Sbjct: 26 VDRLRADVAELSEQAAAPDLWNDQEHAQKVTSQLSHKQAELNRLTKLESRIDDVETMVEM 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E DA L+EA I ++K L+ E+ LLSG YD+ AV++I AGAGG DA D+
Sbjct: 86 GQE--EGDAATLQEARDEISAISKDLESLEIVTLLSGEYDERDAVVTIRAGAGGIDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY RW + + + ++++ S EEAG+KSA EV+ YA+G +S E GTHR+VR
Sbjct: 144 AEMLLRMYTRWADHRNWDVKILDTSYAEEAGLKSATFEVKAPYAFGTMSVEAGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+PL+ E + V+I E +L+I R+ G GGQ+VN ++AVRI
Sbjct: 204 SPFDNQGRRQTSFAAVEVIPLI-EGTDHVEIDENELKIDVYRSSGPGGQSVNTTDSAVRI 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG V E+SQ+ N+ A+ L+++LL++ +++ A+E K++ GD +KA WG QI
Sbjct: 263 THLPTGTVVAMQNEKSQIQNRAAAMRVLQSRLLLLKQQEEAAEKKELAGD-IKASWGDQI 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV HPY++VKD+RTGHE + ++ DG+L+ FI + ++++
Sbjct: 322 RSYVLHPYQMVKDLRTGHEVGNTSAIFDGDLDGFIDAGIRWR 363
>gi|406998514|gb|EKE16445.1| hypothetical protein ACD_11C00017G0035 [uncultured bacterium]
Length = 331
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 225/332 (67%), Gaps = 6/332 (1%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
ELE K++ + FW++ A ET++ L +K K+ + + + + +V L E + D
Sbjct: 2 ELEEKSSQAGFWNDAQSAGETMKELEALKSKVLKFENLEKNIKELGELVDLAE--SAKDK 59
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
+E+ A + L K +++ E L SG YD+ ++SI +GAGG DAQDWA+MLLRMY+
Sbjct: 60 KDIEKQADV---LQKEIEELEFQALFSGEYDRNDVILSIHSGAGGVDAQDWAEMLLRMYL 116
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
R+ EK +KT V+++S G+EAGIKSA +E++G YAYG L GE G HR+VR SPFN+ LR
Sbjct: 117 RFAEKNNFKTNVIDQSRGQEAGIKSATVEIKGNYAYGNLKGEAGVHRLVRLSPFNSDNLR 176
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
QTSF+ E++P++ E S +V+I E+DL + R+ G GGQ+VN ++AVR+THIPTG V
Sbjct: 177 QTSFALVEILPIISEIS-EVKIEEKDLRVDVYRSSGAGGQSVNTTDSAVRVTHIPTGTVV 235
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
C ERSQL NK A+ LKAKL E++ E +++RG+ AEWG Q+R+YV HPYK
Sbjct: 236 TCQNERSQLQNKESAMKILKAKLHQKYLEEKEKEKQKLRGEYQSAEWGSQVRSYVIHPYK 295
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+VKD RT +ETS+ V++G++ FI+SYL++
Sbjct: 296 MVKDHRTKYETSEAEKVLEGDIAEFIESYLRF 327
>gi|410729113|ref|ZP_11367197.1| peptide chain release factor 2 [Clostridium sp. Maddingley
MBC34-26]
gi|410596236|gb|EKQ50918.1| peptide chain release factor 2 [Clostridium sp. Maddingley
MBC34-26]
Length = 324
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 210/323 (65%), Gaps = 4/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ A+E + +K KI+ K +++D + ++ EE D A E I
Sbjct: 6 FWDDTKRAEEVTKKSKVIKSKIDNYDKLKLQVEDVEVLKEIMEEDDEESAN---EIIDTI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ + ++ + + LLSG YDK A++++ G GGTDA DW +MLLRMY RW EKQ Y
Sbjct: 63 RNIETQIEDYNMKVLLSGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQGYSV 122
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS ++V G YAYGYL EKG HR+VR SPFNA G RQTSF+ EV+
Sbjct: 123 ETLDLLPGDEAGIKSVTLKVNGEYAYGYLKAEKGIHRLVRISPFNANGKRQTSFASMEVL 182
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +E D+ I +DL+I R+GG GGQ+VNK ++AVRITH+PTG+ V+C ERSQ A
Sbjct: 183 PELTKEQ-DIDIKADDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQFA 241
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT E
Sbjct: 242 NKDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRTNVE 301
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
TS++ +VMDGE++ FI +YLKY+
Sbjct: 302 TSNVTAVMDGEIDMFINAYLKYQ 324
>gi|227494927|ref|ZP_03925243.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
gi|226831379|gb|EEH63762.1| peptide chain release factor RF2 [Actinomyces coleocanis DSM 15436]
Length = 372
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 160/360 (44%), Positives = 234/360 (65%), Gaps = 4/360 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
++E+ +E I A +L+ +AEL KAA WDN AQ L+ + ++
Sbjct: 8 EIESLRGTLENIIAVTRPDELKARIAELSEKAAVPDLWDNPEAAQAVTSELSHTQAELGR 67
Query: 70 LTDFKTKMDDAVTIVKLTEE-MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
+ ++DD TIV++ EE +D D LLEEA + + + +AL E+ LLSG YD+
Sbjct: 68 IEKMVERIDDLETIVEMAEEDLDEKDL-LLEEAEADLAGIRQALADLEIKTLLSGEYDER 126
Query: 129 GAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGR 188
AV++I AGAGG DA D+A+MLLRMY+RW E+ Y T+V++ S EEAG+KSA EV
Sbjct: 127 SAVVTIRAGAGGVDAADFAEMLLRMYLRWAERNGYPTKVMDTSYAEEAGLKSATFEVNAP 186
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IPE +L+I R
Sbjct: 187 YAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-ETTDHIEIPESELKIDVFR 245
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+ G GGQ+VN ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL + E+ +
Sbjct: 246 SSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLQLRHEEEQA 305
Query: 309 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
K + GD VKA WG Q+R+YV PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 306 AKKALAGD-VKASWGDQMRSYVLQPYQMVKDLRTSHENGNTGAVFDGEIDDFINAGIRWR 364
>gi|415719555|ref|ZP_11467715.1| peptide chain release factor 2 [Gardnerella vaginalis 1500E]
gi|388059080|gb|EIK81840.1| peptide chain release factor 2 [Gardnerella vaginalis 1500E]
Length = 380
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 241/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF +DVE+ + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALRDVES---KYASIEKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|372284517|emb|CCF02797.1| Peptide chain release factor 2; programmed frameshift-containing
[Streptococcus macedonicus ACA-DC 198]
Length = 364
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 232/362 (64%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+++A LE K + FW++ AQ+T Q L +K
Sbjct: 6 IRQKIVENQEKLTSFRRSLDLDRLEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQT 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + D+ +++ +E DS A L E +++L+K + +E T LLS PYD
Sbjct: 66 YETFNEMQELSDETELYLEMLDEDDSVQAELEES----LEKLDKIMTSYETTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDWADML RMY R+G + +K +++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKGFKVEILDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG L E G HR+VR SPF++ R TSFS EVMP L +++++V I ++D+++
Sbjct: 182 GPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSVEVMPEL-DDTIEVDIRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ I+GD + WG QIR+YVF PY +VKD RTG+E + + VMDG+++ FI +YLK
Sbjct: 301 AQEVDAIKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>gi|406944423|gb|EKD76199.1| hypothetical protein ACD_43C00196G0003 [uncultured bacterium]
Length = 372
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 229/359 (63%), Gaps = 6/359 (1%)
Query: 11 VEAASD---RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
+E+A D R+ I + ++ + LE + A+ FW+N AQ + + D++++I
Sbjct: 5 IESAKDLRQRINIIGQQLNVSGMQAKQHALETEMAEPDFWNNTKHAQTVSKEVNDLREEI 64
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + + ++D + + +L + DAG+ + +N+ + E L +G YD
Sbjct: 65 STWENLRHELDSIIELAQLNRT--AGDAGMAIDLEQQFAAVNQKFSELEFHLLFNGQYDA 122
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
AV++I AGAGG DAQDWA++L+RM +R+ E+ ++ V++ S G EAGIKS V++V G
Sbjct: 123 SPAVVAIHAGAGGVDAQDWAEILMRMVMRFCEQHHFQVTVLDISRGSEAGIKSVVMDVVG 182
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
RYAYGYL E G HR+VRQSPFNA LRQTSF+ EV+P L E + V I +EDL I
Sbjct: 183 RYAYGYLKSEHGVHRLVRQSPFNADALRQTSFALIEVLPELGELN-PVVIKDEDLRIDVF 241
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQ+VN ++AVRITH+PT + V+C ERSQ NKI A+ L+AKL + E
Sbjct: 242 RSGGHGGQSVNTTDSAVRITHLPTNIVVQCQNERSQHQNKIIAMKILRAKLHKLQLEAEQ 301
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E ++RG+ AEWG QIR+YV HPYK+VKD RT E SD +V+DG+L+ FI++YL+
Sbjct: 302 AEKLKLRGEFTSAEWGNQIRSYVLHPYKMVKDHRTDFEVSDPQAVLDGKLDGFIEAYLR 360
>gi|261338116|ref|ZP_05966000.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
gi|270276738|gb|EFA22592.1| peptide chain release factor 2 [Bifidobacterium gallicum DSM 20093]
Length = 376
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 241/365 (66%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + EEI + + +L+ + A+LE +AA+ WD+ AQ+ L+ V+
Sbjct: 4 FDFSQAISEARAKYEEIALALDVNRLQSQAAQLEQEAAEPGLWDDPEHAQKVTSKLSAVQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L +++DD T+V+L E D L+EA S ++ + L E+ L+ G
Sbjct: 64 SQLKHLASAASRIDDVETLVELGRE--EADQDTLDEAQSEVESITNDLRDMEIQTLMDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + +++PE ++ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIEVPESEIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
A G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCASGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGEETSQTQAVFDGDIDAFIQAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|387816401|ref|YP_005676745.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
gi|322804442|emb|CBZ01992.1| peptide chain release factor 2 [Clostridium botulinum H04402 065]
Length = 325
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 212/327 (64%), Gaps = 4/327 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ A++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNAIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITH+PTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYKY 369
G ETS++ SVM+G++ FI YLK +
Sbjct: 299 GAETSNVDSVMNGDINMFITQYLKGNF 325
>gi|385801583|ref|YP_005837986.1| peptide chain release factor 2 [Gardnerella vaginalis HMP9231]
gi|415707102|ref|ZP_11461949.1| peptide chain release factor 2 [Gardnerella vaginalis 0288E]
gi|333393731|gb|AEF31649.1| peptide chain release factor 2 [Gardnerella vaginalis HMP9231]
gi|388054102|gb|EIK77047.1| peptide chain release factor 2 [Gardnerella vaginalis 0288E]
Length = 380
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 242/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFSQALNDVEA---KYSSISKALDVDSLKVTIADLEKQASEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
gi|419723549|ref|ZP_14250667.1| peptide chain release factor 2 [Clostridium thermocellum AD2]
gi|419725319|ref|ZP_14252368.1| peptide chain release factor 2 [Clostridium thermocellum YS]
gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
gi|380771283|gb|EIC05154.1| peptide chain release factor 2 [Clostridium thermocellum YS]
gi|380780424|gb|EIC10104.1| peptide chain release factor 2 [Clostridium thermocellum AD2]
Length = 357
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 215/333 (64%), Gaps = 3/333 (0%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
++ ELE KA++ FW++ +Q+ LQ + ++ K+ ++ +D +T+ +L ++
Sbjct: 15 QIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLITLCELG--IEE 72
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
D ++ EA K K + L LL+G YDK A++++ AGAGGT+AQDW ML R
Sbjct: 73 QDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGGTEAQDWVQMLFR 132
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RW EK+ + +V++ GEEAGIKS +V G AYG+L EKG HR+VR SPF+A
Sbjct: 133 MYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRLVRISPFDAS 192
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G R TSF+ +VMP L ++ ++V I +DL I R+ G GGQ++NK E+AVRITHIPTG
Sbjct: 193 GRRHTSFASLDVMPELNDD-IEVHINPDDLRIDTYRSSGAGGQHINKTESAVRITHIPTG 251
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ V C ERSQ NK A+ LKAKL+ + E + +I+ ++G ++ WG QIR+YVF
Sbjct: 252 IVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGSQIRSYVFC 311
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
PY LVKD RT +E ++ +VMDGEL+ FI SYL
Sbjct: 312 PYTLVKDHRTNYEEINVDAVMDGELDGFINSYL 344
>gi|403253475|ref|ZP_10919776.1| peptide chain release factor 2 [Thermotoga sp. EMP]
gi|402811009|gb|EJX25497.1| peptide chain release factor 2 [Thermotoga sp. EMP]
Length = 367
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 232/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S W+++ +A+E Q L +K
Sbjct: 4 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWNDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 120 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVELQPGEEAGIKDATIL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 180 IKGEYAYGYLKYESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIKPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 239 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 299 KKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LVY 361
>gi|415703468|ref|ZP_11459284.1| peptide chain release factor 2 [Gardnerella vaginalis 284V]
gi|415716587|ref|ZP_11466579.1| peptide chain release factor 2 [Gardnerella vaginalis 1400E]
gi|388052508|gb|EIK75530.1| peptide chain release factor 2 [Gardnerella vaginalis 284V]
gi|388057204|gb|EIK80037.1| peptide chain release factor 2 [Gardnerella vaginalis 1400E]
Length = 380
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 242/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSLISKALDVNSLKTAIADLEKQASEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGNIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|377832078|ref|ZP_09815042.1| peptide chain release factor RF2 [Lactobacillus mucosae LM1]
gi|377554085|gb|EHT15800.1| peptide chain release factor RF2 [Lactobacillus mucosae LM1]
Length = 355
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 219/353 (62%), Gaps = 6/353 (1%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+ AS GL L + +AE E + D +FW++ AQ+ + D+K K + K ++
Sbjct: 1 MHASGGLFDLDALNERIAENEHRMTDPNFWNDNETAQKVINENNDLKAKRDTYVHLKEQL 60
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
++ T ++L E TD L E K L ++ LTQLL GPYD + A++ I G
Sbjct: 61 ENLQTTIELLSE--DTDDELQSEFELDYAATQKELQEYRLTQLLDGPYDDKNAILEIHPG 118
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDW MLLRMYVRW E+ + GEEAGIKS + ++GR AYG L E
Sbjct: 119 AGGTEAQDWGAMLLRMYVRWAERHGFVVETANYEAGEEAGIKSVSLLIKGRNAYGMLRSE 178
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
KG HR+VR SPF+A R TSF+ +VMP L ++S+ + I DL + R+ G GGQ++
Sbjct: 179 KGVHRLVRISPFDAAKRRHTSFASVDVMPEL-DDSVQIDIDPSDLRVDTFRSSGAGGQHI 237
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK E+AVRITH+PTG+ V ERSQL N+ A+S LK+KL + EE++A + +I G
Sbjct: 238 NKTESAVRITHLPTGIVVASQAERSQLQNRQTAMSMLKSKLYELEEEKQAKQRAEIEGVQ 297
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+ WG QIR+YVF PY +VKD R+G+ET D+ VMDG L+PFI +YL+++ S
Sbjct: 298 LDIGWGSQIRSYVFQPYTMVKDNRSGYETHDVQGVMDGNLDPFINAYLQWRLS 350
>gi|157149715|ref|YP_001450721.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
substr. CH1]
gi|189040006|sp|A8AY61.1|RF2_STRGC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157074509|gb|ABV09192.1| peptide chain release factor 2 [Streptococcus gordonii str. Challis
substr. CH1]
Length = 364
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 233/366 (63%), Gaps = 5/366 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ ++A +++ R S L+ LE+E+A LE K + FWD+ AQ+T Q L +
Sbjct: 2 DISEIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K D++ ++ E DS E + EL K + +E+T LLS
Sbjct: 62 LKQTYENFHQMTDLFDESEILLDFLAEDDSVQE----ELEEKLAELEKMMTSYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K V++ G+EAGIKS
Sbjct: 118 EPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ EG +AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V+I E+D+
Sbjct: 178 LSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVEIREDDI 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ +A+ L+AKL +
Sbjct: 237 KMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLE 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+E++A+E+ ++GD + WG QIR+YVF PY +VKD RT +E + + VMDG+L+ FI
Sbjct: 297 QEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFID 356
Query: 363 SYLKYK 368
+YLK++
Sbjct: 357 AYLKWR 362
>gi|150015324|ref|YP_001307578.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
8052]
gi|149901789|gb|ABR32622.1| peptide chain release factor 2 [Clostridium beijerinckii NCIMB
8052]
Length = 324
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/324 (46%), Positives = 213/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FWDN +A+E + +KDKI K++++D + ++ E+ D A E
Sbjct: 3 ESGFWDNIKKAEEVTKKSKSIKDKIESFDKLKSQIEDIEVLKEIMEDDDEESAN---EII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
++++ +D + + LL G YDK A++++ G GGTDA DW +MLLRMY RW EKQ
Sbjct: 60 QTLRDIQAQIDDYNMKVLLCGEYDKNNAILTLHVGVGGTDANDWTEMLLRMYTRWCEKQG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y ++ G+EAGIKS ++V G YAYGYL EKG HR+VR SP+NA G RQTSF+
Sbjct: 120 YSIETLDLLPGDEAGIKSVTLKVTGEYAYGYLKAEKGIHRLVRISPYNANGKRQTSFASM 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L +E D++I +DL+I R+GG GGQ+VNK ++AVRITHIPTGV V+C ERS
Sbjct: 180 EVLPELTKEQ-DIEIRSDDLKIDTYRSGGAGGQHVNKTDSAVRITHIPTGVVVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q +N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY +VKD RT
Sbjct: 239 QFSNRDTAMEMLKSKLVELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
ETS++ SVMDGE++ FI +YLK
Sbjct: 299 NVETSNVTSVMDGEIDMFINAYLK 322
>gi|415705167|ref|ZP_11460438.1| peptide chain release factor 2 [Gardnerella vaginalis 75712]
gi|388051889|gb|EIK74913.1| peptide chain release factor 2 [Gardnerella vaginalis 75712]
Length = 380
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 242/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSLISKALDVNSLKTAIADLEKQASEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|354558919|ref|ZP_08978172.1| Peptide chain release factor 2 [Desulfitobacterium metallireducens
DSM 15288]
gi|353545243|gb|EHC14695.1| Peptide chain release factor 2 [Desulfitobacterium metallireducens
DSM 15288]
Length = 332
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/322 (46%), Positives = 214/322 (66%), Gaps = 4/322 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASI 104
FWD+ AQ+ +Q L + K+ + D K +D + +L TEE D++ L E +
Sbjct: 8 FWDDPDSAQKVMQELGFQQAKVKMYEDLHAKFEDLTVLYELATEEEDNS---LETEVETE 64
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
+KEL ++ EL LLS PYD+ ++++ AGAGGT+AQDW ML RMYVRWGE++ YK
Sbjct: 65 VKELQGIFEKLELEILLSNPYDQNNTILTLHAGAGGTEAQDWVSMLYRMYVRWGERRGYK 124
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
++ G+EAGIKSA I + G AYGY EKG HR+VR SPF+A G R TSF+ +V
Sbjct: 125 VETMDLLPGDEAGIKSATISIAGENAYGYAKSEKGVHRLVRISPFDAAGRRHTSFASVDV 184
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
+P + E+ ++ I ++L++ RA G GGQ++NK +AVRITH+PTG+ V C ERSQ+
Sbjct: 185 IPEVEEDDSEIMINPDELKVDTYRASGAGGQHINKTSSAVRITHLPTGIVVACQSERSQI 244
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
N+ + LKAKLL + +Q+A EI +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 245 QNRAYVMRVLKAKLLELKRQQQADEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNV 304
Query: 345 ETSDIVSVMDGELEPFIKSYLK 366
ET+++ +VMDGE++ FI +YL+
Sbjct: 305 ETANVAAVMDGEIDEFIAAYLQ 326
>gi|396584747|ref|ZP_10485197.1| peptide chain release factor 2 [Actinomyces sp. ICM47]
gi|395547582|gb|EJG15010.1| peptide chain release factor 2 [Actinomyces sp. ICM47]
Length = 373
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 239/360 (66%), Gaps = 2/360 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A +L ++AEL KAA WD+ + AQ AL+ + +++ +T ++
Sbjct: 16 MENILAVVQPDKLRAQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRVTQMSERI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +V++ E A +L EA + +++L+K L E+ LL G YD+ AV++I +G
Sbjct: 76 DDLEAMVEMAAEDPDEGADILAEAEADLEKLHKDLSDLEIRTLLDGEYDERNAVVTIRSG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E
Sbjct: 136 AGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IPE +L+I R+ G GGQ+V
Sbjct: 196 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-ETTDHIEIPESELKIDVFRSSGPGGQSV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD
Sbjct: 255 NTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD- 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
VKA WG Q+R+YV PY++VKD+RT E+ + SV DG+++ FI + ++++ + +A D
Sbjct: 314 VKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRKNEQKAAQD 373
>gi|293189308|ref|ZP_06608031.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
gi|399526715|ref|ZP_10766468.1| peptide chain release factor 2 [Actinomyces sp. ICM39]
gi|292821771|gb|EFF80707.1| peptide chain release factor 2 [Actinomyces odontolyticus F0309]
gi|398362731|gb|EJN46407.1| peptide chain release factor 2 [Actinomyces sp. ICM39]
Length = 373
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 239/360 (66%), Gaps = 2/360 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A +L +++AEL KAA WD+ + AQ AL+ + +++ +T ++
Sbjct: 16 MENIIAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +V + E A +L EA + +++L K L E+ LL G YD+ AVI+I +G
Sbjct: 76 DDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E
Sbjct: 136 AGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IPE +L++ R+ G GGQ+V
Sbjct: 196 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-ETTDHIEIPESELKVDVFRSSGPGGQSV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD
Sbjct: 255 NTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD- 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
VKA WG Q+R+YV PY++VKD+RT +E+ + SV DG+++ FI + ++++ + +A D
Sbjct: 314 VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRKNEQKAAQD 373
>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018 =
JCM 11026]
gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
gi|415711540|ref|ZP_11464277.1| peptide chain release factor 2 [Gardnerella vaginalis 55152]
gi|417556586|ref|ZP_12207643.1| peptide chain release factor 2 [Gardnerella vaginalis 315-A]
gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
gi|333602274|gb|EGL13704.1| peptide chain release factor 2 [Gardnerella vaginalis 315-A]
gi|388058374|gb|EIK81171.1| peptide chain release factor 2 [Gardnerella vaginalis 55152]
Length = 380
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 242/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF DVEA + I + + L+ +A+LE +A++ WD+ AQ+ L+
Sbjct: 5 DFAQALNDVEA---KYSLISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L + +++D T+++L +E + D+ + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVEQRIEDTKTLIELGQEEEDADS--MSEAQEELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARAAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
Length = 367
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 235/368 (63%), Gaps = 3/368 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +++++E + R+ EIR S L+ + + ELE + A +FWD++ AQ +
Sbjct: 1 MIDLIEIKQELEKMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD + + + ++ +L +E D L +E + K+L K +FEL L
Sbjct: 61 NALKDLVGEFQSLEERFENLEVTYELIKE--EPDEDLQQELVAEAKKLTKDFSEFELQLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+ PYDK A++ + GAGGT++QDWA MLLRMY RW EK+ +K ++ GEEAG+KS
Sbjct: 119 LNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G AYGYL EKG HR+VR SPF+A G R TSF EVMP + ++ ++++I E
Sbjct: 179 VTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEM-DDDIEIEIRPE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
++++ R+ G GGQ+VN ++AVRITHIPTG+ V C ERSQ+ N+ KA++ LKAKL
Sbjct: 238 EIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQ 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++ F
Sbjct: 298 KKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIF 357
Query: 361 IKSYLKYK 368
I +YL+ K
Sbjct: 358 IDAYLRSK 365
>gi|115311855|sp|Q49VV3.2|RF2_STAS1 RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 373
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 231/368 (62%), Gaps = 18/368 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ ++++E++R S L+ E + E E D +FWDN+ +AQ DV DK
Sbjct: 6 IKRNIDTYNEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQ-------DVIDK 58
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKE--------LNKALDQFELT 118
N L K+ ++ T+ E+MD+T A LLEE +K+ LDQFEL
Sbjct: 59 NNAL---KSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQ 115
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGI 178
LL GPYD A++ + GAGGT++QDW +MLLRMY R+ E++ + + + G+EAG+
Sbjct: 116 LLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGV 175
Query: 179 KSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIP 238
KS + V+G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P +++ I
Sbjct: 176 KSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDIN 235
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
+D+ + RA G GGQ++NK E+A+RITH PTG+ V ERSQ+ N+ A+ LK+KL
Sbjct: 236 PDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKL 295
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
+ E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++
Sbjct: 296 YQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIG 355
Query: 359 PFIKSYLK 366
PFI+++L+
Sbjct: 356 PFIEAFLR 363
>gi|347530813|ref|YP_004837576.1| peptide chain release factor 2 [Roseburia hominis A2-183]
gi|345500961|gb|AEN95644.1| peptide chain release factor 2 [Roseburia hominis A2-183]
Length = 339
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 212/329 (64%), Gaps = 5/329 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+AAD FW++ +Q+ ++ L +KD + T+ +D T++++ E DA L+
Sbjct: 1 MEAAD--FWNDPEVSQKKMKELKSMKDDVATYASLTTQFEDIETLIEMGYE--ENDATLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ E D LLSG YD + A++S+ AGAGGT++ DWA ML RMY RW
Sbjct: 57 PEIEEMLTEFTTTYDAIRAKTLLSGEYDGDNAIVSLHAGAGGTESCDWAAMLYRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
+ + Y V++ GEEAGIKS +V G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 DDKGYSVEVLDSLDGEEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + EE +DV+I ++DL I R+ G GGQ++NK +A+RITH+PTG+ V+C
Sbjct: 177 FVSCDVMPDI-EEDLDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +++ A + IRG+ + WG QIR+YV PY +VK
Sbjct: 236 NERSQFQNKDKAMQMLKAKLYLLKQQENAEKAAGIRGEVTEIGWGNQIRSYVMQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RTG ET ++ SV+DG+L+ F+ YLK+
Sbjct: 296 DHRTGVETGNVDSVLDGKLDIFMNGYLKW 324
>gi|312109506|ref|YP_003987822.1| peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
gi|311214607|gb|ADP73211.1| Peptide chain release factor 2 [Geobacillus sp. Y4.1MC1]
Length = 367
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 229/368 (62%), Gaps = 3/368 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +++++E + R+ EIR S L+ + + ELE + A+ FWD++ AQ +
Sbjct: 1 MIDLIEIKQELEKMAKRLAEIRGSLDLEAKQARIRELEEQMAEPDFWDDQKAAQTVINEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD + + + ++ +L +E D L +E + K L K +FEL L
Sbjct: 61 NALKDLVGEFQSLEERFENLEVTYELIKE--EPDEDLQQELVTEAKRLTKDFSEFELQLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+ PYDK A++ + GAGGT++QDWA MLLRMY RW EK+ +K ++ GEEAGIKS
Sbjct: 119 LNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G AYGYL EKG HR+VR SPF+A G R TSF EV+P + ++ PEE
Sbjct: 179 VTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEE 238
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
++ R+ G GGQ+VN ++AVRITHIPTG+ V C ERSQ+ N+ KAL+ LKAKL
Sbjct: 239 IRIDTY-RSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQ 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++ F
Sbjct: 298 KKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIF 357
Query: 361 IKSYLKYK 368
I +YL+ K
Sbjct: 358 IDAYLRSK 365
>gi|116671212|ref|YP_832145.1| peptide chain release factor 2 [Arthrobacter sp. FB24]
gi|229576665|sp|A0JYC5.1|RF2_ARTS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116611321|gb|ABK04045.1| bacterial peptide chain release factor 2 (bRF-2) [Arthrobacter sp.
FB24]
Length = 371
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 235/348 (67%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I + +++L++++AEL +A + + WD+ A AQ+ L+ + ++ L +++DD
Sbjct: 20 IENVSNVEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTLVSRIDDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L ++ D DA + EAA+ ++ + K+L E+ LLSG +D+ AV++I AGAGG
Sbjct: 80 EVLVELGQDED--DADSMGEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIRAGAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+MLLRMY+RW E+ Y T +++ S EEAG+KSA EV YAYG LS E GT
Sbjct: 138 VDAADFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IP+ ++ + R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIDIPDNEIRVDVFRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG V E+SQL N+ AL L+++LL++ +EQ +E K GD VKA
Sbjct: 257 DSAVRLTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKKEQEDAEKKAFAGD-VKA 315
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV +PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 316 SWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363
>gi|255283235|ref|ZP_05347790.1| peptide chain release factor 2 [Bryantella formatexigens DSM 14469]
gi|255266308|gb|EET59513.1| peptide chain release factor 2 [Marvinbryantia formatexigens DSM
14469]
Length = 334
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/329 (46%), Positives = 211/329 (64%), Gaps = 17/329 (5%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +QE+++ L +KD + K + ++ T++++ E E AS+I
Sbjct: 6 FWDDPESSQESMKTLKALKDDVETYAVLKEQYEEIETLIEMAYE---------ENDASLI 56
Query: 106 KELNKALDQF-------ELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E+ + LD F + LLSG YDK A++++ AGAGGT++ DWA ML RMY RW
Sbjct: 57 LEIQETLDSFIATFENIRIRTLLSGEYDKNDAIVTLHAGAGGTESCDWAGMLYRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
+K+ Y V++ GEEAGIKS EV G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 DKKGYTVEVLDYLDGEEAGIKSVTFEVRGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + EE +D++I EEDL I R+ G GGQ++NK +AVRITH+PT + V+C
Sbjct: 177 FVSCDVMPDI-EEDLDIEIREEDLRIDTYRSSGAGGQHINKTSSAVRITHLPTNIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +++ A ++ IRG+ + WG QIR+YV PY +VK
Sbjct: 236 NERSQFQNKDKAMQMLKAKLYLLKQQENAEKVSGIRGEVKEIGWGNQIRSYVMQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RT ET ++ SVMDG ++ FI +YLK+
Sbjct: 296 DHRTNAETGNVDSVMDGNIDLFINAYLKW 324
>gi|302671676|ref|YP_003831636.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
B316]
gi|302396149|gb|ADL35054.1| peptide chain release factor 2 PrfB [Butyrivibrio proteoclasticus
B316]
Length = 380
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 219/350 (62%), Gaps = 1/350 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ AS L +K + EL + + FWDN +A + + L +++D + + ++
Sbjct: 18 LDEVTASLDLGTKKKIIEELSREMEEPGFWDNAEKANKKTKDLKNMQDLVADIERLNSQY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
D + ++ + D + E S + E + L+ ++ LL+ PYDK ++ + AG
Sbjct: 78 TDIIDLIDMQNAEGVDDDDMAAEIRSELDEFEEKLENIRISNLLNQPYDKYDVILRLNAG 137
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+A DWA ML RMY RW E++ + T V++ G+EAGIKS ++ G AYG L E
Sbjct: 138 AGGTEACDWASMLYRMYTRWAERKGFTTEVLDLLDGDEAGIKSVTFQISGTNAYGLLKSE 197
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPFNA+ RQTSF +VMP + EE +D++I +DL I R+ G GGQ++
Sbjct: 198 HGVHRLVRISPFNAQAKRQTSFVSCDVMPDI-EEDLDIEINPDDLRIDTYRSSGAGGQHI 256
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVRITHIPTGV V C ERSQ NK KA+ LKAKL ++ +E++A+++ IRG+
Sbjct: 257 NKTSSAVRITHIPTGVVVACQNERSQFQNKDKAMQMLKAKLFIMKQEEQAAKLAGIRGEV 316
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+ WG QIR+YV PY +V D RTG + S+ V+DGEL+PFI +YLK+
Sbjct: 317 MDNAWGSQIRSYVLQPYTMVNDTRTGFKASNADGVLDGELDPFINAYLKW 366
>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
27405]
gi|125713111|gb|ABN51603.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
27405]
Length = 357
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 215/333 (64%), Gaps = 3/333 (0%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
++ ELE KA++ FW++ +Q+ LQ + ++ K+ ++ +D +T+ +L ++
Sbjct: 15 QIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWEDLITLCELG--IEE 72
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
D ++ EA K K + L LL+G YDK A++++ AGAGGT+AQDW ML R
Sbjct: 73 QDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGGTEAQDWVQMLFR 132
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY RW EK+ + +V++ GEEAGIKS +V G AYG+L EKG HR+VR SPF+A
Sbjct: 133 MYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGVHRLVRISPFDAS 192
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G R TSF+ +VMP L ++ ++V I +DL I R+ G GGQ++NK E+AVRITHIPTG
Sbjct: 193 GRRHTSFASLDVMPELNDD-IEVHINPDDLRIDTYRSSGAGGQHINKTESAVRITHIPTG 251
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ V C ERSQ NK A+ LKAKL+ + E + +I+ ++G ++ WG QIR+YVF
Sbjct: 252 IVVSCQSERSQFQNKDTAMKMLKAKLMELKERENKEKIEDLKGIQLEIAWGSQIRSYVFC 311
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
PY LVKD RT +E ++ +VMDGEL+ FI SYL
Sbjct: 312 PYTLVKDHRTNYEEINVDAVMDGELDGFINSYL 344
>gi|403527852|ref|YP_006662739.1| peptide chain release factor 2 [Arthrobacter sp. Rue61a]
gi|403230279|gb|AFR29701.1| peptide chain release factor 2 [Arthrobacter sp. Rue61a]
Length = 374
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 231/339 (68%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+ E+AEL +A WD+ A AQ L+ + ++ L+ +++DD +V+L +
Sbjct: 31 LKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKLASRIDDLEVLVELGQ- 89
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D D + EAA + + KAL + E+T LLSG YD+ AV++I AGAGG DA D+A+M
Sbjct: 90 -DEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIRAGAGGVDAADFAEM 148
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E GTHR+VR SPF
Sbjct: 149 LMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRISPF 208
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+PL+ E++ ++IP+ ++ + R+ G GGQ+VN ++AVR+THI
Sbjct: 209 DNQGRRQTSFAAVEVIPLI-EQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHI 267
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V E+SQL N+ A+ L+++LL++ +EQ+ +E K + GD VKA WG Q+R+Y
Sbjct: 268 PTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGD-VKASWGDQMRSY 326
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V +PY++VKD+RT HE + +V+DG+++ FI + ++++
Sbjct: 327 VLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWR 365
>gi|415728929|ref|ZP_11472267.1| peptide chain release factor 2 [Gardnerella vaginalis 6119V5]
gi|388064929|gb|EIK87444.1| peptide chain release factor 2 [Gardnerella vaginalis 6119V5]
Length = 380
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 241/373 (64%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF +DVE+ + I + + L+ +A+LE +AA+ WD+ AQ+ L+
Sbjct: 5 DFAQALRDVES---KYASIVKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ ++ L +++D T+++L +E DA + EA + + LD E+ LL
Sbjct: 62 AQSQLKRLQAVDQRIEDTKTLIELGQE--EGDADSMSEAQDELGSIAHELDDMEVQTLLD 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD AV++I +GAGG DA D+A MLLRMY+RW E+ YKT++++ S EEAGIKSA
Sbjct: 120 GEYDARSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+V+ YAYG LS E GTHR+VR SPF+ +G RQT FS EV+PL+ E + + IP+ D+
Sbjct: 180 FQVDAPYAYGRLSVEGGTHRMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDI 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ +A G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+
Sbjct: 239 RVDTFQASGPGGQGVNTTYSAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI+
Sbjct: 299 HAEEAAKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFIE 357
Query: 363 SYLKYKYSMSLSA 375
+ +++++ ++A
Sbjct: 358 AGIRWRHEQRVAA 370
>gi|354613403|ref|ZP_09031324.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
gi|353222233|gb|EHB86550.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
Length = 368
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/366 (42%), Positives = 235/366 (64%), Gaps = 8/366 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF KD+ ++ ++ A L L KE+AELE +AA W++ AQ+ L+
Sbjct: 4 DFETAIKDL---GGKLSQVEAVMDLDALRKEVAELEQEAARPDLWNDPDAAQKVTSRLSH 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ + +TD + +++D + +L + DA EA + + EL + +D E+ LLS
Sbjct: 61 QQGALRKVTDLRQRVNDLSVLHELA--VAEGDAASRAEADTELAELTREIDALEVRTLLS 118
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD+ AV++I + AGG DA DWA+MLLRMY+RW E+ Y TR+ + S EEAGI+SA
Sbjct: 119 GEYDERNAVVTIRSEAGGVDAADWAEMLLRMYLRWAERHNYPTRIYDISYAEEAGIRSAT 178
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+VE YAYG LS E+GTHR+VR SPF+ + RQTSF+ EV+P + E V+IPE+D+
Sbjct: 179 FKVEASYAYGTLSVEQGTHRLVRISPFDNQNRRQTSFAHVEVLPEVAEVDH-VEIPEKDI 237
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ R+ G GGQ+VN ++AVRITH+PTGV V C E+SQL NK A+S L+AKLL
Sbjct: 238 RVDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKAVAMSVLQAKLLQRK 297
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+E+ +E+ +R + WG Q+R+YV HPY+LVKD+RT HET + +V++GE++ F+
Sbjct: 298 KEEERAELDALRDSG--SSWGNQMRSYVLHPYQLVKDLRTEHETGNPTAVLEGEIDRFLD 355
Query: 363 SYLKYK 368
+ ++++
Sbjct: 356 AGIRWR 361
>gi|255659162|ref|ZP_05404571.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
gi|260848613|gb|EEX68620.1| peptide chain release factor 2 [Mitsuokella multacida DSM 20544]
Length = 368
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/338 (42%), Positives = 224/338 (66%), Gaps = 3/338 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++AELE K + +FWD+ +AQ+ Q L DVK ++ + K +DA T+ ++ M
Sbjct: 29 EEKIAELEYKMGEPTFWDDAEKAQKINQELNDVKISVDKYKNLVAKFEDAQTLWEMG--M 86
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
+ D + E+ S + + + L+ +L LLSGPYD A++++ AGAGGT+AQDW ML
Sbjct: 87 EEQDESMEEDVKSELAAVAEGLESLQLEVLLSGPYDANNAILTLHAGAGGTEAQDWTQML 146
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY RW E+ + + G+EAG+KSA + ++G AYG+L EKG HR+VR SPF+
Sbjct: 147 LRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFLRSEKGIHRLVRISPFD 206
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A+ R TSF+ ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+P
Sbjct: 207 AQARRHTSFAACDIMPEI-DDNVEVNINMSDVRVDTYRASGAGGQHINKTSSAVRMTHMP 265
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V+C ERSQL N+ + L L+AKL + E++ +E+ ++ GD K EWG QIR+YV
Sbjct: 266 TGIVVQCQNERSQLQNREQCLKMLRAKLFELEMEKKEAELAKLEGDQQKIEWGSQIRSYV 325
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
F PY +VKD RT ET ++ +VMDG+++ FI+++L K
Sbjct: 326 FQPYTMVKDHRTNVETGNVQAVMDGDIDMFIRAFLAAK 363
>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
Length = 330
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 216/327 (66%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ +FWDN EAQ+ Q L +K ++ + +K DDA ++++ ++ D L E
Sbjct: 2 GEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMA--LEENDTSLEPEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ + + A+ + EL LLSGPYD A++++ AGAGGT+AQDW MLLRMY RW E+
Sbjct: 60 QTEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ + G+EAG+KSA + + G AYGYL EKG HR+VR SPF++ R TSFS
Sbjct: 120 GFSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSA 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH+PTG+ V+C ER
Sbjct: 180 CDIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ + + L+AKL + +E++ +EI+++ GD K EWG QIR+YVF PY +VKD+R
Sbjct: 239 SQLQNREQCMKMLRAKLFELEQEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
TG ET ++ +VMDG+L+ FI+++L K
Sbjct: 299 TGMETGNVQAVMDGDLDAFIEAFLAAK 325
>gi|429736427|ref|ZP_19270325.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429155106|gb|EKX97806.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 368
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 239/364 (65%), Gaps = 5/364 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ SFWD+ A AQ+ Q L +K
Sbjct: 4 DLKPILNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAAAAQKLNQELAALKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ + K K +DA T+ ++ EE D T G + ++I E L+ +L LLSG
Sbjct: 64 GVDTYEELKAKYEDAETLYEMGIEENDPTMEGDIRAELTLIAE---GLETLQLEVLLSGD 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA +
Sbjct: 121 YDANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLF 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 181 IKGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRV 239
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E
Sbjct: 240 DYFRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQE 299
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++Y
Sbjct: 300 KKEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAY 359
Query: 365 LKYK 368
L K
Sbjct: 360 LNAK 363
>gi|119960719|ref|YP_948373.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
gi|119947578|gb|ABM06489.1| peptide chain release factor 2 [Arthrobacter aurescens TC1]
Length = 398
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 231/339 (68%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+ E+AEL +A WD+ A AQ L+ + ++ L+ +++DD +V+L +
Sbjct: 55 LKTEIAELSEQAGAPDLWDDPASAQVITSRLSHRQSEVERLSKLASRIDDLEVLVELGQ- 113
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D D + EAA + + KAL + E+T LLSG YD+ AV++I AGAGG DA D+A+M
Sbjct: 114 -DEGDEDSMAEAAKELSSIRKALAELEITTLLSGEYDEREAVVTIRAGAGGVDAADFAEM 172
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E GTHR+VR SPF
Sbjct: 173 LMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRISPF 232
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+PL+ E++ ++IP+ ++ + R+ G GGQ+VN ++AVR+THI
Sbjct: 233 DNQGRRQTSFAAVEVIPLI-EQTDSIEIPDNEIRVDVFRSSGPGGQSVNTTDSAVRLTHI 291
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V E+SQL N+ A+ L+++LL++ +EQ+ +E K + GD VKA WG Q+R+Y
Sbjct: 292 PTGIVVSMQNEKSQLQNRAAAMRVLQSRLLLVKKEQQDAEKKALAGD-VKASWGDQMRSY 350
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V +PY++VKD+RT HE + +V+DG+++ FI + ++++
Sbjct: 351 VLNPYQMVKDLRTEHEVGNTSAVLDGDIDDFIDAGIRWR 389
>gi|399525176|ref|ZP_10765644.1| peptide chain release factor 2 [Atopobium sp. ICM58]
gi|398373459|gb|EJN51395.1| peptide chain release factor 2 [Atopobium sp. ICM58]
Length = 373
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 238/360 (66%), Gaps = 2/360 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A +L +++AEL KAA WD+ + AQ AL+ + +++ +T ++
Sbjct: 16 MENIVAVVQPDKLREQIAELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +V++ E A +L EA + + +L K L E+ LL G YD+ AVI+I +G
Sbjct: 76 DDLEAMVEMAAEDPDEGADILAEAEADLDKLRKDLGDLEIRTLLDGEYDERNAVITIRSG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E
Sbjct: 136 AGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IPE +L++ R+ G GGQ+V
Sbjct: 196 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-ETTDHIEIPESELKVDVFRSSGPGGQSV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD
Sbjct: 255 NTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD- 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
VKA WG Q+R+YV PY++VKD+RT E+ + SV DG+++ FI + ++++ + +A D
Sbjct: 314 VKASWGDQMRSYVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWRKNEQKAAQD 373
>gi|222152785|ref|YP_002561962.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
gi|254790921|sp|B9DRN6.1|RF2_STRU0 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|222113598|emb|CAR41450.1| peptide chain release factor 2 [Streptococcus uberis 0140J]
Length = 366
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 227/362 (62%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L LE+E+A LE K + FW++ AQ+T Q L +K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKST 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
D D+ +L EM + D + EE + +L + L Q+E+T LLS PYD
Sbjct: 66 FETFHDMLELSDET----ELYLEMLAEDESIKEELEEALVKLEQILSQYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDWADML RMY R+G + +K ++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG+L E G HR+VR SPF++ R TSF+ EVMP L +++++V I ++D+++
Sbjct: 182 GPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVDIRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ ++GD + WG QIR+YVF PY +VKD RT E + + VMDGE++ FI +YLK
Sbjct: 301 AEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>gi|260587039|ref|ZP_05852952.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
gi|331082810|ref|ZP_08331932.1| peptide chain release factor 2 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542529|gb|EEX23098.1| peptide chain release factor 2 [Blautia hansenii DSM 20583]
gi|330400139|gb|EGG79788.1| peptide chain release factor 2 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 372
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 145/353 (41%), Positives = 227/353 (64%), Gaps = 3/353 (0%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++ ++E+R S L+ EK + ELE + FWDN +Q+ ++ L+ +K + + +
Sbjct: 15 TEPLKEVRDSLDLENKEKRVEELEREMEAPGFWDNAERSQKMMKELSALKGDMEIYHKLQ 74
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ ++ ++++ E D ++ + ++ E + + + LLSG YDK+ A++++
Sbjct: 75 NQKEEIELMIEMGYE--ENDPSIVPDIQEMLDEFIQDFEHIRIKTLLSGEYDKDNAIVTL 132
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
AGAGGT++ DWA ML RMY+RW ++Q + T V++ G+EAGIKS +V G AYGYL
Sbjct: 133 HAGAGGTESCDWASMLYRMYLRWADRQGFSTEVLDYLDGDEAGIKSVTFQVNGENAYGYL 192
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
EKG HR+VR SPFNA G RQTSF +VMP + EE +DV+I +DL I R+ G GG
Sbjct: 193 KSEKGVHRLVRISPFNAAGKRQTSFVSCDVMPDI-EEDVDVEINPDDLRIDTYRSSGAGG 251
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q++NK +A+RITH+PTG+ V+C ERSQ NK KA+ LKAKL ++ +++ ++ I+
Sbjct: 252 QHINKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYLLKQQENEKKLSGIQ 311
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
G+ + WG QIR+YV PY +VKD RT ET ++ +VM+G ++ FI +YLK+
Sbjct: 312 GELTEIGWGNQIRSYVMQPYTMVKDHRTNEETGNVDAVMNGNIDNFINAYLKW 364
>gi|289577756|ref|YP_003476383.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
gi|289527469|gb|ADD01821.1| hypothetical protein Thit_0519 [Thermoanaerobacter italicus Ab9]
Length = 368
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 239/368 (64%), Gaps = 6/368 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K AD FW++ ++QE +
Sbjct: 2 LQDY---KAEVSKMFEEIKEMGVSLDIEGVKREVEEIDKKMADPDFWNDIKKSQELAKRQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++K+ + K +D T+++L ++ D + EE KEL K L+ ++ L
Sbjct: 59 KELKELLEEYNSLVRKWEDLTTLIELG--LEEGDESITEEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW + + ++ GEEAGIKS
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G +AYGYL E G HR+VR SPF+A G R TSF+ EV+P L E+ ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-EDDIEVEIRPE 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLRIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLD 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDF 355
Query: 361 IKSYLKYK 368
I +YLK K
Sbjct: 356 INAYLKQK 363
>gi|308176991|ref|YP_003916397.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
gi|307744454|emb|CBT75426.1| peptide chain release factor 2 [Arthrobacter arilaitensis Re117]
Length = 371
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 233/342 (68%), Gaps = 4/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ Q++ ++A L +A + WD+ A AQ L+ + ++ LT +T++DD +V+L
Sbjct: 26 VDQIKADIAVLSEEAGVPNLWDDPAAAQIVTSKLSHRQSELERLTRLRTRIDDLEVLVEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA L+EA + + K+L E+ LLSG +D GAV++I +GAGG DA D+
Sbjct: 86 AELED--DADTLDEAEKELVSIQKSLADLEIVTLLSGEFDSRGAVVTIRSGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY+RW E++ YK V++ S EEAG+KSA E++ YA+G LS E GTHR+VR
Sbjct: 144 AEMLLRMYLRWAERRGYKATVMDTSYAEEAGLKSATFEIDAPYAFGTLSVEAGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+PL+ E++ ++IPE ++ + R+ G GGQ+VN ++AVR+
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLI-EQTDTIEIPESEIRVDVFRSSGPGGQSVNTTDSAVRM 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTGV V E+SQ+ N+ AL L+++LL++ +EQ ++ K+ GD VKA WG Q+
Sbjct: 263 THIPTGVVVSMQNEKSQIQNRAAALRVLQSRLLLLKKEQEDAQKKEFAGD-VKATWGDQM 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV +PY++VKD+RT HE + +V+DGE++ FI + ++++
Sbjct: 322 RSYVLNPYQMVKDLRTEHEVGNTQAVLDGEIDDFIDAGIRWR 363
>gi|255637443|gb|ACU19049.1| unknown [Glycine max]
Length = 155
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 143/155 (92%), Positives = 151/155 (97%)
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MPLLP+ESM+V+IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL
Sbjct: 1 MPLLPDESMNVEIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 60
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
ANKI+ALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH
Sbjct: 61 ANKIRALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 120
Query: 345 ETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 379
ET+DI SVMDGEL+PFIKSYLK+KY+MSLS S N
Sbjct: 121 ETTDITSVMDGELDPFIKSYLKHKYNMSLSTSGVN 155
>gi|153932889|ref|YP_001382578.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
19397]
gi|153936079|ref|YP_001386131.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
gi|152928933|gb|ABS34433.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
19397]
gi|152931993|gb|ABS37492.1| peptide chain release factor 2 [Clostridium botulinum A str. Hall]
Length = 325
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/324 (45%), Positives = 211/324 (65%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITH+PTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINIFITQYLK 322
>gi|227513676|ref|ZP_03943725.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
gi|227524821|ref|ZP_03954870.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
gi|227083087|gb|EEI18399.1| peptide chain release factor 2 [Lactobacillus buchneri ATCC 11577]
gi|227088036|gb|EEI23348.1| peptide chain release factor 2 [Lactobacillus hilgardii ATCC 8290]
Length = 354
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 215/333 (64%), Gaps = 3/333 (0%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWD++ AQ+ + +K K + ++DD ++L E D+G+
Sbjct: 20 EAKMAEPGFWDDQQAAQKMIDETNQLKTKRDRFNTLTKELDDLKVTLELISE--DPDSGM 77
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRW 157
+E +L K LD+++L LL+G YD A++ I GAGGT+AQDW MLLRMY RW
Sbjct: 78 QDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTEAQDWGSMLLRMYTRW 137
Query: 158 GEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQT 217
E +K V++ +GE AGI S I + G AYGYL EKG HR+VR SPF++ G R T
Sbjct: 138 AESHNFKVDVLDYQVGEVAGINSVSILISGENAYGYLRSEKGVHRLVRISPFDSAGRRHT 197
Query: 218 SFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRC 277
SF+ +VMP L ++ + ++I ++L++ RA G GGQ+VNK +AVRITHIPTG+ V
Sbjct: 198 SFASVDVMPEL-DDDVSIKISPDELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVVAS 256
Query: 278 TEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLV 337
+RSQL N+ AL+ LK+KL + E+++A E +I G+ + WG QIR+YVFHPY +V
Sbjct: 257 QAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWGSQIRSYVFHPYSMV 316
Query: 338 KDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
KD RT +ET+++ VMDG+L+PFI +YL+++ S
Sbjct: 317 KDHRTNYETANVNGVMDGDLDPFINAYLQWQLS 349
>gi|225867150|ref|YP_002752528.1| peptide chain release factor 2, programmed frameshift, partial
[Bacillus cereus 03BB102]
gi|225787101|gb|ACO27318.1| peptide chain release factor 2, programmed frameshift [Bacillus
cereus 03BB102]
Length = 380
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 233/362 (64%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+++E + R+ R S L EK++AELE K + FWD++ AQ + +KD
Sbjct: 21 IRQELEKMAKRLAAFRGSLCLPTKEKQIAELEEKMMGAGFWDDQQGAQAVINEANALKD- 79
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ F+ ++D+ +++T E+ + D L EE S +K L + ++++EL LLS P
Sbjct: 80 --MVGKFR-QLDETFENLEITHELLKEEYDEELHEELESEVKGLIQEMNEYELQLLLSDP 136
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K V+ G+EAGIKS +
Sbjct: 137 YDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKVETVDYLPGDEAGIKSVTLL 196
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF EV+P +E +++++ EDL+I
Sbjct: 197 IKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVVPEFNDE-VEIEVRTEDLKI 255
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ+VN ++AVRITH PT V C ERSQ+ N+ A+ LKAKL E
Sbjct: 256 DTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSERSQIKNREHAMKMLKAKLYQKKLE 315
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++PFI +Y
Sbjct: 316 EQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTEVGNVQAVMDGEIDPFIDAY 375
Query: 365 LK 366
L+
Sbjct: 376 LR 377
>gi|315652552|ref|ZP_07905533.1| peptide chain release factor RF2 [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485181|gb|EFU75582.1| peptide chain release factor RF2 [Lachnoanaerobaculum saburreum DSM
3986]
Length = 351
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 219/348 (62%), Gaps = 4/348 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
EK++ EL+ + SFWD+ E+ + ++ +KD + K++ +D ++++ E
Sbjct: 5 EKKIIELDRAMEEPSFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE- 63
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L+ E ++++E K +D ++ LL+G YD A++ + AGAGGT++ DW ML
Sbjct: 64 -ENDESLIPEIEAMLEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSML 122
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
RMY RW K+ Y V++ G+EAGIKS +++ G AYGYL E G HR+VR SPFN
Sbjct: 123 YRMYTRWAAKEGYTVDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFN 182
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A G RQTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIP
Sbjct: 183 AAGKRQTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIP 241
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TGV V+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV
Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYV 301
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
PY +VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 302 MQPYTMVKDHRTGAESGNVTAVMDGDIDKFIIAYLTWQ-SLGCPARNA 348
>gi|153810056|ref|ZP_01962724.1| hypothetical protein RUMOBE_00437 [Ruminococcus obeum ATCC 29174]
gi|149834234|gb|EDM89314.1| peptide chain release factor 2 [Ruminococcus obeum ATCC 29174]
Length = 335
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 214/329 (65%), Gaps = 5/329 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWDN +Q+ ++ L +KD + + +T+M+D T++++ E D ++
Sbjct: 1 MEAPD--FWDNAEVSQQKMKELKSMKDDMEIYHSLETQMEDMETMIEMGYE--ENDPEII 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ E K D + LLSG YD E A+I + AGAGGT+A DW ML RMY RW
Sbjct: 57 PEIQEMLDEFQKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWV 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
+++ + V++ G+EAG+KS +V G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 DRKGFTMEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + ++ +DV+I ++D+ I R+ G GGQ++NK +A+RITH PTG+ V+C
Sbjct: 177 FVSCDVMPDIKKD-LDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +++ +++ IRG+ WG QIR+YV PY +VK
Sbjct: 236 NERSQHMNKDKAMQMLKAKLYLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RT ET ++ +V+DG+++PFI +YLK+
Sbjct: 296 DHRTSEETGNVDAVLDGDIDPFINAYLKW 324
>gi|153938890|ref|YP_001389537.1| peptide chain release factor 2 [Clostridium botulinum F str.
Langeland]
gi|384460618|ref|YP_005673213.1| peptide chain release factor 2 [Clostridium botulinum F str.
230613]
gi|152934786|gb|ABS40284.1| peptide chain release factor 2 [Clostridium botulinum F str.
Langeland]
gi|295317635|gb|ADF98012.1| peptide chain release factor 2 [Clostridium botulinum F str.
230613]
Length = 325
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 210/324 (64%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
E++P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITH+PTG+ V+C ERS
Sbjct: 180 EILPELTDDQ-EIEIKSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINMFITQYLK 322
>gi|168177506|ref|ZP_02612170.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
gi|421839233|ref|ZP_16272865.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001627]
gi|182671219|gb|EDT83193.1| peptide chain release factor 2 [Clostridium botulinum NCTC 2916]
gi|409735367|gb|EKN36957.1| peptide chain release factor 2 [Clostridium botulinum CFSAN001627]
Length = 325
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 147/324 (45%), Positives = 210/324 (64%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ +G GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSGVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITH+PTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKERIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINMFITQYLK 322
>gi|184154810|ref|YP_001843150.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
gi|183226154|dbj|BAG26670.1| peptide chain release factor 2 [Lactobacillus fermentum IFO 3956]
Length = 355
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 222/354 (62%), Gaps = 12/354 (3%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTK 76
+ AS GL L + +A+ E + FWD+ AQE + AL ++K + N LT
Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLT----- 55
Query: 77 MDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ D V + LT EM D L E + + L + L QLL GPYD+ A++ I
Sbjct: 56 LQDQVEELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 115
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
GAGGT+AQDW +MLLRMY+RW + + GEEAGIKS + ++G AYGYL
Sbjct: 116 HPGAGGTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYL 175
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
EKG HR+VR SPF++ R TSF+ +VMP+L +ES++V+I DL + RA G GG
Sbjct: 176 HPEKGVHRLVRISPFDSAARRHTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGG 234
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q++NK E+AVRITH+PTG+ ERSQL N+I A++ LK+KL + EE++A E QI
Sbjct: 235 QHINKTESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIE 294
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
G+ + WG QIR+YVFHPY LVKD RTG+ET D+V VMDG+L+PFI +YL++
Sbjct: 295 GEQKEIGWGSQIRSYVFHPYTLVKDARTGYETHDVVGVMDGDLDPFINAYLQWN 348
>gi|170782441|ref|YP_001710774.1| chain release factor 2 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157010|emb|CAQ02182.1| chain release factor 2 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 367
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 234/355 (65%), Gaps = 6/355 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D IR+ G+++L++E+ EL +A + WD+ +AQ+ L+ + ++ + + +
Sbjct: 15 DTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQR 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD +V EM D EEA + + K +D+ E+ LL+G +D AV++I
Sbjct: 75 RLDDLDVLV----EMAKDDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIR 130
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGG DA D+A+ML+RMY+RW E+ Y V++ S EEAGIKSA E++ YA+G LS
Sbjct: 131 AGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLS 190
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
E GTHR+VR SPFN+ G RQTSF+ EV+PL+ E++ ++IPE D+ + R+ G GGQ
Sbjct: 191 VEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLI-EQTESIEIPENDMRVDVFRSSGPGGQ 249
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VN ++AVRITH+PTG+ V C E+SQ+ N+ AL L+++LL++ EQ A+ K++ G
Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAG 309
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+ + A WG Q+R+YV PY++VKD+RT HE ++ +V DG+L+ FI + ++++ S
Sbjct: 310 N-ITASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRKS 363
>gi|196231602|ref|ZP_03130460.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
gi|196224455|gb|EDY18967.1| peptide chain release factor 2 [Chthoniobacter flavus Ellin428]
Length = 350
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 151/326 (46%), Positives = 219/326 (67%), Gaps = 5/326 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM-DSTDAGLLEE 100
A+ FW N+ AQ+ ++ ++ +++KI L +++D +++L E D T +E+
Sbjct: 2 AEPDFWANKERAQKNVEEVSTLRNKIGPLLTLDRQIEDLPVLIELAREANDETSVKEVEK 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
+I+ L +FEL LL+GP D+ A ++I +GAGGT++ DWADMLLRMY RW E+
Sbjct: 62 EYGVIQ---NGLAEFELKMLLNGPNDRYNAFLTINSGAGGTESCDWADMLLRMYQRWIER 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+K+ V++ LGEEAGIKS ++V G YA+GYL+ E+G HR+VR SPF+A R TSF+
Sbjct: 119 HGFKSEVMDIQLGEEAGIKSCTLKVAGEYAFGYLATERGVHRLVRISPFDANKRRHTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
G +V+P LP ES ++I E D+E+ R+GGKGGQNVNKVETAVRI HIPTG+ C E
Sbjct: 179 GVDVVPELP-ESAPIEINEADIEVDTYRSGGKGGQNVNKVETAVRIRHIPTGIVAACQNE 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ NK+ A+ L+AKL I ++ A+E G+ +G QIR+YVF PY+ V D+
Sbjct: 238 RSQQKNKVTAMRMLQAKLQQIEVDKMAAETAAAYGEKADVSFGSQIRSYVFQPYQKVLDL 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
RTG +TS+I +VMDG+++ FI+ L+
Sbjct: 298 RTGVDTSNISAVMDGDIDAFIQGKLR 323
>gi|315606122|ref|ZP_07881153.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
str. F0310]
gi|315312404|gb|EFU60490.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 180
str. F0310]
Length = 372
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 231/340 (67%), Gaps = 2/340 (0%)
Query: 29 QLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE 88
+L +++AEL KAA WD+ + AQE AL+ + +++ +T ++DD +V++
Sbjct: 27 KLREQIAELNEKAAAPDLWDDPSAAQEVTSALSHRQSELDRITQMSERIDDLEAMVEMAA 86
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
E A +L EA +++L K L E+ LL G YD+ AVI+I +GAGG DA D+A+
Sbjct: 87 EDPDEGAEILAEAEGDLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFAE 146
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
+LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E GTHR+VR SP
Sbjct: 147 ILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRISP 206
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
F+ +G RQTSF+ EV+PL+ E + ++IPE +L++ R+ G GGQ+VN ++AVR+TH
Sbjct: 207 FDNQGRRQTSFAAVEVIPLI-ETTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRMTH 265
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
IPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD VKA WG Q+R+
Sbjct: 266 IPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD-VKASWGDQMRS 324
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
YV PY++VKD+RT E+ + SV DG+++ FI + ++++
Sbjct: 325 YVLQPYQMVKDLRTEFESGNPQSVFDGDIDGFINAGIRWR 364
>gi|336233899|ref|YP_004586515.1| hypothetical protein Geoth_0394 [Geobacillus thermoglucosidasius
C56-YS93]
gi|335360754|gb|AEH46434.1| hypothetical protein Geoth_0394 [Geobacillus thermoglucosidasius
C56-YS93]
Length = 367
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/368 (43%), Positives = 228/368 (61%), Gaps = 3/368 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D +++++E + R+ EIR S L+ + + ELE + A FWD++ AQ +
Sbjct: 1 MIDLIEIKQELEKMAKRLAEIRGSLDLEAKQARIRELEEQMAAPDFWDDQKAAQTVINEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD + + + ++ +L +E D L +E + K L K +FEL L
Sbjct: 61 NALKDLVGEFQSLEERFENLEVTYELIKE--EPDEDLQQELVTEAKRLTKDFSEFELQLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+ PYDK A++ + GAGGT++QDWA MLLRMY RW EK+ +K ++ GEEAGIKS
Sbjct: 119 LNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G AYGYL EKG HR+VR SPF+A G R TSF EV+P + ++ PEE
Sbjct: 179 VTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVIPEMDDDIEIEIRPEE 238
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
++ R+ G GGQ+VN ++AVRITHIPTG+ V C ERSQ+ N+ KAL+ LKAKL
Sbjct: 239 IRIDTY-RSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKALNMLKAKLYQ 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT E ++ +VMDGE++ F
Sbjct: 298 KKLEEQQAELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIF 357
Query: 361 IKSYLKYK 368
I +YL+ K
Sbjct: 358 IDAYLRSK 365
>gi|76787098|ref|YP_329299.1| peptide chain release factor 2 [Streptococcus agalactiae A909]
gi|123602195|sp|Q3K2F4.1|RF2_STRA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|76562155|gb|ABA44739.1| peptide chain release factor 2, programmed frameshift
[Streptococcus agalactiae A909]
Length = 365
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 233/362 (64%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+E+A LE + + FW++ AQ+T Q L ++K K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + D+ ++++ +E DS L EE + +L+K + +E+T LLS PYD
Sbjct: 66 YDTFHNMQELSDETELLLEMLDEDDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDW D+LLRMY R+G +K V++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V++ ++D+++
Sbjct: 182 GPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ ++GD + WG QIR+YVF PY +VKD RT E + + VMDGE+ FI +YLK
Sbjct: 301 AQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>gi|374583718|ref|ZP_09656812.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
gi|374419800|gb|EHQ92235.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
Length = 368
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 232/361 (64%), Gaps = 2/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+ +K++E + ++R S + + +++ LE + WD+ AQ+ +Q L+ +
Sbjct: 4 DWKKELETLEMSLADLRVSLDVAKRRDKISALETEFHRPDLWDDPVNAQKIMQELSLHQG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ + K ++++ T+ +L E D D L + I+ L + + EL LLSGPY
Sbjct: 64 KVKTYEELKQELEETSTLWQLAVEED--DVSLEPDIEQGIEALKQRFEALELELLLSGPY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A++++ AGAGGT+AQDW ML R+Y+RWGE+ YK ++ GEEAGIKSA +
Sbjct: 122 DRNNAILTLHAGAGGTEAQDWVQMLYRLYIRWGERHGYKVETLDFLHGEEAGIKSATLSF 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G AYGY EKG HR+VR SPF+A G R TSF+ +V+P + E++ ++ I EDL I
Sbjct: 182 SGENAYGYAKSEKGVHRLVRISPFDASGRRHTSFASVDVIPEVAEDNDEIPIDAEDLRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+GG GGQ+VNK ++A+RITH+PTG+ V+C ERSQ NK A+ L+AKLL + ++
Sbjct: 242 TYRSGGAGGQHVNKTDSAIRITHLPTGIVVQCQSERSQTQNKAAAMRVLQAKLLELKRKE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ +EI +IRG+ + WG QIR+YVFHPY LVKD RT ET ++ +VMDGE++ FI ++L
Sbjct: 302 QEAEISEIRGEQQEIAWGSQIRSYVFHPYSLVKDHRTNVETGNVSAVMDGEIDAFIAAFL 361
Query: 366 K 366
+
Sbjct: 362 Q 362
>gi|154507630|ref|ZP_02043272.1| hypothetical protein ACTODO_00111 [Actinomyces odontolyticus ATCC
17982]
gi|153797264|gb|EDN79684.1| peptide chain release factor 2 [Actinomyces odontolyticus ATCC
17982]
Length = 373
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 238/360 (66%), Gaps = 2/360 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A +L +++ EL KAA WD+ + AQ AL+ + +++ +T ++
Sbjct: 16 MENIIAVVQPDKLREQIVELNEKAAAPDLWDDPSAAQAVTSALSHRQSELDRITQMSERI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +V + E A +L EA + +++L K L E+ LL G YD+ AVI+I +G
Sbjct: 76 DDLEAMVDMAAEDPDEGADILAEAEADLEKLRKDLGDLEIRTLLDGEYDERNAVITIRSG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E
Sbjct: 136 AGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IPE +L++ R+ G GGQ+V
Sbjct: 196 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-ETTDHIEIPESELKVDVFRSSGPGGQSV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD
Sbjct: 255 NTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD- 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
VKA WG Q+R+YV PY++VKD+RT +E+ + SV DG+++ FI + ++++ + +A D
Sbjct: 314 VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQSVFDGDIDGFINAGIRWRKNEQKAAQD 373
>gi|348027317|ref|YP_004767122.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
gi|341823371|emb|CCC74295.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
Length = 337
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/328 (46%), Positives = 215/328 (65%), Gaps = 3/328 (0%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+ +D +FW++ +A++ Q T +K ++ + K DD +++ M+ DA
Sbjct: 1 MQMSDPAFWNDPDKAKKISQEATLLKTEVEGHEELVRKADDLSEYLEMA--MEDGDASFA 58
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E+ +L K +++ E+ LLSG YDK A+I+ AGAGGT+AQDWA ML+RMY RW
Sbjct: 59 EDIEKQYHDLLKDIEKREVRLLLSGEYDKCNALITFHAGAGGTEAQDWAQMLIRMYTRWA 118
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E+ YK +++ G+EAGIKSA VEG YAYGYL EKG HR+VR SPF+A R TS
Sbjct: 119 ERNGYKLTILDMQPGDEAGIKSAAFRVEGEYAYGYLKSEKGVHRLVRISPFDAAARRHTS 178
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ +VMP LP++ +DV+I +D+ + + RA G GGQ+VNK +AVR+TH+PTG+ V+C
Sbjct: 179 FTAVDVMPELPDD-VDVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHMPTGIVVQCQ 237
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQL NK L L+AKL + +E++ +I G EWG QIR+YVFHPY LVK
Sbjct: 238 NERSQLQNKEMCLKYLRAKLFELEQEKQEKLKAEIGGVHQAIEWGSQIRSYVFHPYNLVK 297
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RT ET +I +VMDG+L+ FI+ YL+
Sbjct: 298 DHRTNVETGNIQAVMDGDLDIFIEGYLQ 325
>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
BAA-835]
gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
BAA-835]
Length = 329
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/328 (45%), Positives = 220/328 (67%), Gaps = 5/328 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD++ A+ + + +K ++ + K++++D ++L +E D D G
Sbjct: 1 MSAPD--FWDDQNAARALMAEVNPLKHRMEAFSALKSRLEDIDAAIELAQEADDDDLG-- 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
EA K+L FEL LL+GP D+ ++I AGAGGT+A DWA MLLRMY+RW
Sbjct: 57 REAVEEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWC 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E++ + +E + G++AGI+S ++V+G YAYGYL E+G HR+VR SPF++ G R TS
Sbjct: 117 ERRGFSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ + P + +S++++I ++DL++ R+GGKGGQNVNKVETAVRITHIP+GV V C
Sbjct: 177 FASLDATPEV-SDSINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQL NK +A++ L+AKL I E+++ +E + + WG QIR+YVF PY++VK
Sbjct: 236 NERSQLRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEKGDIGWGNQIRSYVFQPYQMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D+RTG E+ +I VMDG L+PFI++ L+
Sbjct: 296 DLRTGVESGNIQDVMDGNLDPFIEAMLR 323
>gi|383755047|ref|YP_005433950.1| putative peptide chain release factor 2 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381367099|dbj|BAL83927.1| putative peptide chain release factor 2 [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 368
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 222/338 (65%), Gaps = 3/338 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++AELE K + +FWD+ AQ+ Q L D+K ++ K +DA T++++ E
Sbjct: 29 EEKIAELEYKMGEPTFWDDAEAAQKLNQELADLKSGVDKYKSLVAKHEDAETLLEMGLEE 88
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D D + ++ + + E+ + L+ +L LLSGPYD A++++ AGAGGT+AQDW ML
Sbjct: 89 D--DPSMEDDVKAELDEVAEGLEALQLEVLLSGPYDANNAILTLHAGAGGTEAQDWTQML 146
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY RW E+ + + G+EAG+KSA + ++G AYG+L EKG HR+VR SPF+
Sbjct: 147 LRMYGRWAERHGFTVETADLLPGDEAGVKSATLFIKGHNAYGFLKSEKGVHRLVRISPFD 206
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSFS ++MP + +++++V I D+ + RA G GGQ++NK +AVR+TH P
Sbjct: 207 ANARRHTSFSACDIMPEI-DDAVEVDINMADVRVDTYRASGAGGQHINKTSSAVRMTHEP 265
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V+C ERSQL N+ + + L+AKL + E++ +E+ ++ GD EWG QIR+YV
Sbjct: 266 TGIVVQCQNERSQLQNREQCMKMLRAKLFELEMEKKEAELAKLEGDQQNIEWGSQIRSYV 325
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
F PY +VKD RT ET ++ +VMDG+++PFI+++L K
Sbjct: 326 FQPYTMVKDHRTSQETGNVQAVMDGDIDPFIRAFLAAK 363
>gi|227514375|ref|ZP_03944424.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
14931]
gi|227087241|gb|EEI22553.1| peptide chain release factor RF2 [Lactobacillus fermentum ATCC
14931]
Length = 355
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 222/354 (62%), Gaps = 12/354 (3%)
Query: 21 IRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTK 76
+ AS GL L + +A+ E + FWD+ AQE + AL ++K + N LT
Sbjct: 1 MHASGGLFDLDALNESIAQGENEMTAPDFWDDNQRAQEKVAALNELKKRRDNFLT----- 55
Query: 77 MDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ D V + LT EM D L E + + L + L QLL GPYD+ A++ I
Sbjct: 56 LQDQVEELALTAEMLQAEPDPELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEI 115
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
GAGGT+AQDW +MLLRMY+RW + + GEEAGIKS + ++G AYGYL
Sbjct: 116 HPGAGGTEAQDWGEMLLRMYMRWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYL 175
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
EKG HR+VR SPF++ R TSF+ +VMP+L +ES++V+I DL + RA G GG
Sbjct: 176 HPEKGVHRLVRISPFDSAARRHTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGG 234
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q++NK E+AVRITH+PTG+ ERSQL N+I A++ LK+KL + EE++A E QI
Sbjct: 235 QHINKTESAVRITHLPTGIVTSSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIE 294
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
G+ + WG QIR+YVFHPY LVKD RTG+ET D++ VMDG+L+PFI +YL++
Sbjct: 295 GEQREIGWGSQIRSYVFHPYTLVKDARTGYETHDVIGVMDGDLDPFINAYLQWN 348
>gi|224003217|ref|XP_002291280.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973056|gb|EED91387.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 343
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 223/352 (63%), Gaps = 35/352 (9%)
Query: 30 LEKELAELEMKAADSSFWD----NRAEAQETLQALTDVKDKINLLTDFKTKMD------- 78
++ L +LE + + SFWD +R+E V +I T K +M+
Sbjct: 1 IQSRLQDLETETSSPSFWDASNSDRSEV---------VTREIGRYTRLKGEMEGWERLRG 51
Query: 79 DAVTIVKLTEEM-DSTDAG-------------LLEEAASIIKELNKALDQFELTQLLSGP 124
DA+ ++L +++ D + G EE S ++L + ++EL LLSGP
Sbjct: 52 DALGALELLQDLLDGSSGGDNFEEDEDEMILLTFEECQSSAQKLLEQSQKYELQTLLSGP 111
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD + +TAGAGGT+A DW ML RMY+R + YK V+E+S+G+ G KS +
Sbjct: 112 YDSAQCTLQLTAGAGGTEACDWVSMLYRMYMRHAQFMDYKVTVLEESVGDVVGYKSVELL 171
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESM-DVQIPEEDLE 243
VEG AYG+ GEKG HR+VR SPFNA RQT+F+G +V+PLL E ++ ++ IPE++LE
Sbjct: 172 VEGVNAYGWFKGEKGAHRLVRLSPFNANNKRQTTFAGVDVIPLLEEGTVSEIDIPEKELE 231
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I+ R+GGKGGQNVNKVET VR+ HIP+G+ ++CT+ERSQ NK AL+RLK +LLVIA+
Sbjct: 232 ITTMRSGGKGGQNVNKVETGVRVKHIPSGIAIKCTQERSQSQNKQIALTRLKGQLLVIAQ 291
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDG 355
EQ+ I IRGD V+A WG QIRNYV PYK+VKD R+G ETSD+ V+DG
Sbjct: 292 EQQLQSINAIRGDIVEASWGAQIRNYVMQPYKMVKDARSGWETSDVEGVLDG 343
>gi|320116558|ref|YP_004186717.1| peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|319929649|gb|ADV80334.1| Peptide chain release factor 2 [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 368
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 241/368 (65%), Gaps = 6/368 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + V+E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEVKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW + ++ ++ GEEAGIKS
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G +AYGYL E G HR+VR SPF+A G R TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 361 IKSYLKYK 368
I +YLK K
Sbjct: 356 INAYLKQK 363
>gi|317057134|ref|YP_004105601.1| peptide chain release factor 2 [Ruminococcus albus 7]
gi|315449403|gb|ADU22967.1| peptide chain release factor 2 [Ruminococcus albus 7]
Length = 378
Score = 303 bits (776), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 228/362 (62%), Gaps = 2/362 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
NLR ++EA + E+ ++ +++ EL KAA+ FWD+ ++Q LQ +++
Sbjct: 8 NLRSELEACRPMIRELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEG 67
Query: 66 KINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
K+ F DD ++++ EE + T A L+EE + + +L LD L LL+G
Sbjct: 68 KVERYNKFNGAADDIEVMIEMAAEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGE 127
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A+++ AGAGGT+AQDW +ML+RMY +W + + ++++ G +AGIKS +
Sbjct: 128 YDHSNAILNFHAGAGGTEAQDWTEMLIRMYTKWADSHGFSAKIMDILEGGDAGIKSCSMF 187
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+EG AYGYL E G HR+VR SPF++ G R TSFS EVMP L +++++V+I ED+E+
Sbjct: 188 IEGENAYGYLKSESGIHRLVRISPFDSSGSRHTSFSAVEVMPEL-DDTIEVEIRPEDIEM 246
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ++NK +AVR+ H PTG+ C +RSQ NK A+ LKAKL+ I E
Sbjct: 247 EVYRASGAGGQHINKTSSAVRLIHKPTGIVTACQTQRSQFQNKDYAMKMLKAKLIEIKER 306
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ +I+ I+G + WG QIR+YVF PY LVKD+RTG E +++ +VMDG+L+ FI +Y
Sbjct: 307 EHLEKIEDIKGVQKEIAWGSQIRSYVFMPYTLVKDLRTGFEYNNVKAVMDGDLDGFINAY 366
Query: 365 LK 366
LK
Sbjct: 367 LK 368
>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409924|gb|ABP66928.1| peptide chain release factor 2 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 323
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 213/314 (67%), Gaps = 3/314 (0%)
Query: 53 AQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKAL 112
+Q+ LQ + +KDKI ++ +D + +L ++ ++ + +E + +L + +
Sbjct: 4 SQKVLQQIKRLKDKIERYQKLYSQWEDLKVLTQLC--IEESNIEMSDELEKDLIDLERKI 61
Query: 113 DQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSL 172
++F+L LL+GPYDK A++SI AGAGGT+AQDWA+MLLRMY RW K+ YK ++
Sbjct: 62 EEFKLEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILP 121
Query: 173 GEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEES 232
GEEAGIK+ + + G AYGYL EKG HR+VR SPF+A G R TSF+ EV+P + E+
Sbjct: 122 GEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEV-EDD 180
Query: 233 MDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALS 292
D++I EEDLEI RA G GGQ+VNK E+AVRI HIPTG+ V C ERSQ N+ AL
Sbjct: 181 TDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALK 240
Query: 293 RLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSV 352
LKAKLL + E++R +I++++G+ + WG QIR+YVF PY LVKD RT E ++ +V
Sbjct: 241 ILKAKLLELREKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTDAEVGNVEAV 300
Query: 353 MDGELEPFIKSYLK 366
MDGE++ FI +YLK
Sbjct: 301 MDGEIDVFINAYLK 314
>gi|225016122|ref|ZP_03705355.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
DSM 5476]
gi|224951119|gb|EEG32328.1| hypothetical protein CLOSTMETH_00066 [Clostridium methylpentosum
DSM 5476]
Length = 375
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 227/362 (62%), Gaps = 3/362 (0%)
Query: 4 FYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDV 63
F + ++ A +++++RA+ + L +E+A+LE AA FWD+ +Q+ LQ T +
Sbjct: 9 FEEYKAELSALKPKIQQLRAALDVDALVQEVAQLEETAAQPGFWDDLDNSQKVLQKTTRL 68
Query: 64 KDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
K+ I ++ +D T+V+ E D D +E + +K + +D L LLSG
Sbjct: 69 KNTIAEFEKIESLYEDTQTLVEFAFEED--DESCSDEVKANLKSIQDQVDAQRLATLLSG 126
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD A+++ AGAGGT+A DW +ML RMY W E+ ++T+ ++ GEEAGIKS I
Sbjct: 127 EYDANNAILTFHAGAGGTEAMDWVEMLFRMYSHWAERHGFQTKTLDFVEGEEAGIKSISI 186
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
+ G AYG+L E G HR+VR SPF++ G R TSF+ EV+P + ++S++V+I EDL
Sbjct: 187 LIVGTNAYGFLKSETGVHRLVRVSPFDSSGRRHTSFASLEVIPEV-DDSIEVEIRPEDLR 245
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ R+ G GGQ+VNK E+A+RITH+PTG+ C ERSQ+ N+ A+ LK+KL+ I E
Sbjct: 246 VDTYRSSGAGGQHVNKTESAIRITHLPTGIVTACQNERSQMQNRAVAMKMLKSKLIEIKE 305
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+ +I I+G+ + WG QIR+YVF PY LVKD RTG E +I +VMDG+L+ FI +
Sbjct: 306 REHLDKISDIKGEQKEIAWGSQIRSYVFMPYTLVKDHRTGFENGNISAVMDGDLDGFINA 365
Query: 364 YL 365
YL
Sbjct: 366 YL 367
>gi|227510661|ref|ZP_03940710.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190313|gb|EEI70380.1| peptide chain release factor 2 [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 354
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/333 (44%), Positives = 215/333 (64%), Gaps = 3/333 (0%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ FWD++ AQ+ + +K K + ++DD ++L E D+G+
Sbjct: 20 EAKMAEPGFWDDQQAAQKLIDETNQLKTKRDRFDTLTNELDDLKVTLELISE--DPDSGM 77
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRW 157
+E +L K LD+++L LL+G YD A++ I GAGGT+AQDW MLLRMY RW
Sbjct: 78 QDEFIGEADKLKKQLDRYQLGLLLNGKYDHNNAILEIHPGAGGTEAQDWGSMLLRMYTRW 137
Query: 158 GEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQT 217
E +K V++ +GE AGI S I + G AYGYL EKG HR+VR SPF++ G R T
Sbjct: 138 AETHDFKVDVLDYQVGEVAGINSVSILINGENAYGYLRSEKGVHRLVRISPFDSAGRRHT 197
Query: 218 SFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRC 277
SF+ +VMP L ++ + ++I ++L++ RA G GGQ+VNK +AVRITHIPTG+ V
Sbjct: 198 SFASVDVMPEL-DDDVSIKISPDELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVVAS 256
Query: 278 TEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLV 337
+RSQL N+ AL+ LK+KL + E+++A E +I G+ + WG QIR+YVFHPY +V
Sbjct: 257 QAQRSQLQNRQTALNMLKSKLYELEEQKKAEEKAKIEGEQLDIGWGSQIRSYVFHPYSMV 316
Query: 338 KDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
KD RT +ET+++ VMDG+L+PFI +YL+++ S
Sbjct: 317 KDHRTNYETANVNGVMDGDLDPFINAYLQWQLS 349
>gi|337744478|ref|YP_004638640.1| protein PrfB [Paenibacillus mucilaginosus KNP414]
gi|379718117|ref|YP_005310248.1| protein PrfB [Paenibacillus mucilaginosus 3016]
gi|386720677|ref|YP_006187002.1| protein PrfB [Paenibacillus mucilaginosus K02]
gi|336295667|gb|AEI38770.1| PrfB [Paenibacillus mucilaginosus KNP414]
gi|378566789|gb|AFC27099.1| PrfB [Paenibacillus mucilaginosus 3016]
gi|384087801|gb|AFH59237.1| protein PrfB [Paenibacillus mucilaginosus K02]
Length = 333
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/328 (45%), Positives = 217/328 (66%), Gaps = 5/328 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ+ + + +K I+ L + +D +++L +E D L
Sbjct: 1 MSAPD--FWDDNEKAQKLIAEMNAIKGSIDQLQALTAEYEDLELMMELVQE--ENDESLA 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E S I L K L+ FEL LLS PYDK A++ + GAGGT++QDWA+MLLRMY RW
Sbjct: 57 SELTSGITALVKKLEGFELQLLLSQPYDKLNAILELHPGAGGTESQDWAEMLLRMYRRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ +K V++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TS
Sbjct: 117 EKRGFKVEVLDYLPGDEAGVKSVTLLIQGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F ++MP + ++ ++++I EDL++ RA G GGQ++N ++AVRITH+PTGV V C
Sbjct: 177 FVSCDIMPEI-DDDVEIEIRTEDLKVDTYRASGAGGQHINTTDSAVRITHMPTGVVVSCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A+ L++KL E++ ++ +IRG+ WG QIR+YVFHPY +VK
Sbjct: 236 TERSQIKNRDRAMKMLRSKLYEKKIEEQQKQLAEIRGEVADIAWGSQIRSYVFHPYSMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RTG ET ++ +VMDG+L+PFI +YL+
Sbjct: 296 DHRTGEETGNVGAVMDGDLDPFIDAYLR 323
>gi|345016985|ref|YP_004819338.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032328|gb|AEM78054.1| peptide chain release factor 2 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 368
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 241/368 (65%), Gaps = 6/368 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLNTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW + ++ ++ GEEAGIKS
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETIDYLQGEEAGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G +AYGYL E G HR+VR SPF+A G R TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEEGNVNAVMDGEIDGF 355
Query: 361 IKSYLKYK 368
I +YLK K
Sbjct: 356 INAYLKQK 363
>gi|297544050|ref|YP_003676352.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841825|gb|ADH60341.1| hypothetical protein Tmath_0587 [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 368
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 239/368 (64%), Gaps = 6/368 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ + AD FW++ ++QE +
Sbjct: 2 LQDY---KAEVSKMFEEIKEMGVSLDIEGVKREIEEIDKEMADPDFWNDIKKSQELAKRQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++K+ + K +D T+++L ++ D + EE KEL K L+ ++ L
Sbjct: 59 KELKELLEEYNSLVRKWEDLTTLIELG--LEEGDESITEEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW + + ++ GEEAGIKS
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFDVETLDYLQGEEAGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G +AYGYL E G HR+VR SPF+A G R TSF+ EV+P L E+ ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-EDDIEVEIRPE 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLRIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQNERSQIQNRETAMKMLKAKLLD 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHKEAAWGNQIRSYVFQPYTLVKDHRTNFEVGNVQAVMDGEIDDF 355
Query: 361 IKSYLKYK 368
I +YLK K
Sbjct: 356 INAYLKQK 363
>gi|401565607|ref|ZP_10806437.1| peptide chain release factor 2 [Selenomonas sp. FOBRC6]
gi|400186702|gb|EJO20909.1| peptide chain release factor 2 [Selenomonas sp. FOBRC6]
Length = 368
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 238/364 (65%), Gaps = 5/364 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ SFWD+ A AQ+ Q L +K
Sbjct: 4 DLKPILNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAAAAQKLNQELAALKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ K K +DA T+ ++ EE D T G + ++I E L+ +L LLSG
Sbjct: 64 GVDTYEGLKAKYEDAETLYEMGIEENDPTMEGDIRAELTLIAE---GLETLQLEVLLSGD 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA +
Sbjct: 121 YDANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLF 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 181 IKGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRV 239
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E
Sbjct: 240 DYFRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQE 299
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++Y
Sbjct: 300 KKEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNVETGNVQAVMDGEIDPFIRAY 359
Query: 365 LKYK 368
L K
Sbjct: 360 LNAK 363
>gi|119025481|ref|YP_909326.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
15703]
gi|154486912|ref|ZP_02028319.1| hypothetical protein BIFADO_00745 [Bifidobacterium adolescentis
L2-32]
gi|118765065|dbj|BAF39244.1| peptide chain release factor 2 [Bifidobacterium adolescentis ATCC
15703]
gi|154084775|gb|EDN83820.1| peptide chain release factor 2 [Bifidobacterium adolescentis L2-32]
Length = 376
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/373 (41%), Positives = 246/373 (65%), Gaps = 4/373 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L E +LE+KAA+ WD+ AQ+ L+ V+
Sbjct: 4 FDYSEAISEARAKYESISKALDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLSAVQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L +++D T+V+L +E + DA L EA + ++ + K LD E+ LL G
Sbjct: 64 SQLKRLASADQRIEDVETLVELGQEEE--DADTLAEAKAEVESIQKDLDDMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + +P+ ++ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDVPDSEIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAG 359
Query: 365 LKYKYSMSLSASD 377
+++++ +A++
Sbjct: 360 IRWRHEQRRAAAE 372
>gi|422344171|ref|ZP_16425097.1| peptide chain release factor 2 [Selenomonas noxia F0398]
gi|355377490|gb|EHG24707.1| peptide chain release factor 2 [Selenomonas noxia F0398]
Length = 368
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 239/363 (65%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K + SFWD+ A AQ+ Q L D+K
Sbjct: 4 DLKPILNDLGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ D K +DA T+ ++ ++ DA + + + + +++ L+ +L LLSG Y
Sbjct: 64 GVDTYRDLMAKYEDAETLYEMG--IEENDASMEADIRAELTLISEGLETLQLEVLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + +
Sbjct: 122 DANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLFI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 182 KGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E+
Sbjct: 241 YFRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDG+++PFI++YL
Sbjct: 301 KEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAYL 360
Query: 366 KYK 368
K
Sbjct: 361 NAK 363
>gi|257069176|ref|YP_003155431.1| peptide chain release factor 2 [Brachybacterium faecium DSM 4810]
gi|256559994|gb|ACU85841.1| bacterial peptide chain release factor 2 (bRF-2) [Brachybacterium
faecium DSM 4810]
Length = 371
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 236/343 (68%), Gaps = 6/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ L+ ++A+LE +A+ WD+ AQ+ AL+ + + +++ ++++D +V+L
Sbjct: 26 IDALDAKIADLEKQASAQDLWDDVDNAQKVSSALSHAQSERRRISELDSRIEDLEVMVQL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA LEEA + + ++K LD+ E+ LLSG YD+ AVI+I AGAGG DA D+
Sbjct: 86 AAEED--DADTLEEAENELVSIHKTLDELEVRTLLSGEYDERDAVITIRAGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW E+ Y T+V++ S EEAG+KS EV +AYG LS E GTHR+VR
Sbjct: 144 AEMLMRMYLRWAERHGYATKVMDTSHAEEAGLKSVTFEVSAPFAYGTLSVEGGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+ +G RQTSF+ EV+PL+ ES D ++IPE DL++ R+ G GGQ+VN ++AVR
Sbjct: 204 SPFDNQGRRQTSFAAVEVIPLI--ESTDSIEIPENDLKVDVFRSSGPGGQSVNTTDSAVR 261
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
+TH+PTG V +E+SQ+ N+ AL ++++LL++ + + A+E K++ GD VKA WG Q
Sbjct: 262 MTHLPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAGD-VKASWGDQ 320
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+R+YV +PY++VKD+RT ++ + SV DGE++ FI + ++++
Sbjct: 321 MRSYVLNPYQMVKDLRTDYQEGNPSSVFDGEIDEFIDAGIRWR 363
>gi|139474158|ref|YP_001128874.1| peptide chain release factor 2 [Streptococcus pyogenes str.
Manfredo]
gi|166225116|sp|A2RFN2.1|RF2_STRPG RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|134272405|emb|CAM30661.1| peptide chain release factor 2 [Streptococcus pyogenes str.
Manfredo]
Length = 365
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 231/362 (63%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+E+A LE + FW++ AQ+T Q L ++K K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + D+ ++++ +E DS L EE + +L+K + +E+T LLS PYD
Sbjct: 66 YDTFHNMQELSDETELLLEMLDEDDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDW D+LLRMY R+G +K V++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG L E G HR+VR SPF++ R TSF+ EVMP L + +++V++ ++D+++
Sbjct: 182 GPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPEL-DNTIEVEVRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ ++GD + WG QIR+YVF PY +VKD RT E + + VMDGE+ FI +YLK
Sbjct: 301 AQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>gi|433456579|ref|ZP_20414617.1| peptide chain release factor 2 [Arthrobacter crystallopoietes
BAB-32]
gi|432196076|gb|ELK52562.1| peptide chain release factor 2 [Arthrobacter crystallopoietes
BAB-32]
Length = 371
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 236/350 (67%), Gaps = 4/350 (1%)
Query: 19 EEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMD 78
E I A + ++ + K++A L +A WD+ A AQ+ L+ + ++ L +++D
Sbjct: 18 ESIEAVSDVEAIRKDIAVLSEQAGAPDLWDDPAAAQKITSKLSHRQSELERLEKLASRID 77
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
D +V+L + D+ D L EAA+ ++ L K+L E+ LLSG YD+ AV++I +GA
Sbjct: 78 DLEVLVELGK--DAGDEDSLTEAAAELQALKKSLSDLEVVTLLSGEYDEREAVVTIRSGA 135
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E
Sbjct: 136 GGVDAADFAEMLMRMYLRWAERHGYSTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEA 195
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IP+ D+++ R+ G GGQ+VN
Sbjct: 196 GTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIDIPDNDIKVDVFRSSGPGGQSVN 254
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+TH+PTG+ V E+SQ+ N+ A+ L+++LL++ +EQ +E K + GD V
Sbjct: 255 TTDSAVRLTHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD-V 313
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KA WG Q+R+YV +PY++VKD+RT HE + +V+DGE++ FI + ++++
Sbjct: 314 KASWGDQMRSYVLNPYQMVKDLRTEHEVGNTGAVLDGEIDDFIDAGIRWR 363
>gi|295109041|emb|CBL22994.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
obeum A2-162]
Length = 334
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 214/329 (65%), Gaps = 5/329 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ +Q+ ++ L +KD + + +++M+D T++++ E D ++
Sbjct: 1 MEAPD--FWDDAEVSQKKMKELKSMKDDMEIYHSLESQMEDMETMIEMGYE--ENDPEII 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ E K D + LLSG YD E A+I + AGAGGT+A DW ML RMY RW
Sbjct: 57 PEIQEMLDEFEKNFDSIRVKTLLSGEYDSENAIIKLNAGAGGTEACDWCGMLYRMYSRWV 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
+++ + V++ G+EAGIKS +V G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 DRKGFTMEVLDYLDGDEAGIKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + ++ +DV+I ++D+ I R+ G GGQ++NK +A+RITH PTG+ V+C
Sbjct: 177 FVSCDVMPDIKKD-LDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +++ +++ IRG+ WG QIR+YV PY +VK
Sbjct: 236 NERSQHMNKDKAMQMLKAKLFLLKQQEAEAKLSGIRGEVTDIGWGNQIRSYVMQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RT ET ++ +V+DGE++PFI +YLK+
Sbjct: 296 DHRTSEETGNVDAVLDGEIDPFINAYLKW 324
>gi|154496274|ref|ZP_02034970.1| hypothetical protein BACCAP_00559 [Bacteroides capillosus ATCC
29799]
gi|150274357|gb|EDN01434.1| peptide chain release factor 2 [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 373
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 152/349 (43%), Positives = 225/349 (64%), Gaps = 3/349 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++E+ + GL+ E+EL LE ++A FW+N +AQ+ Q + + K++ +
Sbjct: 18 LDELGQALGLEAAERELEMLESESASDGFWNNLEKAQKIQQRIKQLHHKVDGQKKRLGEW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+D +T+ ++ E + D L+ E +L +++ L+ L +G YD V++I AG
Sbjct: 78 EDLLTLCEMGNEEE--DESLVPELEEGFNKLTANMEEARLSTLFTGEYDDNNVVLAIHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDWA MLLRMY RW E+ ++ +VV+ G+EAGIKSA + ++G AYG+L E
Sbjct: 136 AGGTEAQDWAQMLLRMYTRWAERHDFEYQVVDFQDGDEAGIKSATVMIQGENAYGHLRSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPF+A RQTSF+ EVMP LPE++ DV+I E+ E+ R+ G GGQ++
Sbjct: 196 HGVHRLVRVSPFDANARRQTSFAAVEVMPDLPEDA-DVEIRPEEYEMQVFRSSGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVR+ H TG+ V C ERSQ NK L L+AKL+ + +Q A ++ I+G
Sbjct: 255 NKTSSAVRLIHHATGIVVSCQTERSQFQNKDTCLRMLRAKLVELKMQQHAEKLSDIKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+K EWG QIR+YVF PY+LVKD R+G ETS++ VMDG+++ FI +YLK
Sbjct: 315 LKIEWGSQIRSYVFMPYQLVKDNRSGFETSNVNGVMDGDIDGFINAYLK 363
>gi|238926688|ref|ZP_04658448.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
gi|238885445|gb|EEQ49083.1| peptide chain release factor RF2 [Selenomonas flueggei ATCC 43531]
Length = 368
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 238/363 (65%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K + SFWD+ A AQ+ Q L D+K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELADLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ DA + ++ + + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKGLMAKYEDAETLYEMG--IEEGDASMEDDIRAELDLITEGLETLQLEVLLSGDY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + +
Sbjct: 122 DANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFAVETADLQPGDEAGVKSATLFI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 182 KGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + + L+AKL + +E+
Sbjct: 241 YYRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++YL
Sbjct: 301 KEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYL 360
Query: 366 KYK 368
K
Sbjct: 361 NAK 363
>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 372
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 224/350 (64%), Gaps = 4/350 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+ A L+ + ++AEL ++AD W ++ AQ+ + L+ ++ +N + ++DD
Sbjct: 20 VSAVLDLEAMHTQIAELREQSADPELWADQDNAQKVTRQLSSLESMVNKINGIGQRLDDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+ +L E D D + EA + +L K + + E+ LL+GP+D+ A+++I + AGG
Sbjct: 80 GVLYELAEAEDDADTRV--EADRELDQLRKEIGELEVRTLLNGPHDEREAIVTINSQAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA DWA ML RMY+RW E+ Y T V E S EEAGIKS V+ +AYG L GE GT
Sbjct: 138 VDAADWAQMLQRMYLRWAERHGYPTDVYETSYAEEAGIKSTSFAVKTPFAYGTLRGEHGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ + RQTSF+G +V+P++ E+S ++I + DL + R+ G GGQ VN
Sbjct: 198 HRLVRISPFDNQNRRQTSFAGVDVVPVV-EQSDHIEIDDGDLRVDVYRSSGPGGQGVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVRITH+PTG+ V C ERSQL NK A+S L+AKLL E+ + + +IRGD+V +
Sbjct: 257 DSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQAKLLARKREEEQAALDEIRGDSVSS 316
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG Q+RNYV HPY+ VKDVRTG ET + V+DG+++ FI + +++ S
Sbjct: 317 -WGTQMRNYVLHPYQSVKDVRTGAETGNTSGVLDGDIDEFIDAEIRWMRS 365
>gi|392938875|ref|ZP_10304519.1| peptide chain release factor 2 [Thermoanaerobacter siderophilus
SR4]
gi|392290625|gb|EIV99068.1| peptide chain release factor 2 [Thermoanaerobacter siderophilus
SR4]
Length = 368
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 241/368 (65%), Gaps = 6/368 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLNTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW + ++ ++ GEEAGIKS
Sbjct: 117 LNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G +AYGYL E G HR+VR SPF+A G R TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 361 IKSYLKYK 368
I +YLK K
Sbjct: 356 INAYLKQK 363
>gi|153956213|ref|YP_001396978.1| peptide chain release factor 2 [Clostridium kluyveri DSM 555]
gi|219856538|ref|YP_002473660.1| hypothetical protein CKR_3195 [Clostridium kluyveri NBRC 12016]
gi|146349071|gb|EDK35607.1| PrfB [Clostridium kluyveri DSM 555]
gi|219570262|dbj|BAH08246.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 328
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 211/324 (65%), Gaps = 3/324 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ AQ+ +++ ++N ++DA ++++ +E D+ +E
Sbjct: 3 EPNFWNDIDNAQKIASEEKNLEGRLNRYDLLSHNIEDARILLEIIKE--EEDSMSFQEVM 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
IK++ ++ F LL G YDK A++++ G GGTDAQDW +MLLRMY+RW EK
Sbjct: 61 KDIKDIEFQVEIFRTEILLCGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYIRWAEKMG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
YK +++ E+AGIKS + + G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 121 YKVNIIDMLEAEDAGIKSVSLSIIGEFAYGYLKSEKGIHRLVRISPFNANGKRQTSFASV 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L + D++I EDL++ RAGG GGQ+VNK E+AVRITHIPTG+ V+C ERS
Sbjct: 181 EVLPELTGDQ-DIEIRSEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK +AL LKAKL+ + E I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 240 QHYNKEQALKILKAKLVELKERAHKDRIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G E+S++ SVMDG+++ FIK YLK
Sbjct: 300 GVESSNVSSVMDGDIDNFIKGYLK 323
>gi|386772748|ref|ZP_10095126.1| peptide chain release factor 2 [Brachybacterium paraconglomeratum
LC44]
Length = 371
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 233/340 (68%), Gaps = 6/340 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L+K++A+LE +A+ WD+ AQ+ AL+ + + +++ ++++D +V+L E
Sbjct: 29 LDKKIADLEKQASAQDLWDDVENAQKVSSALSHAQSERRRISELASRIEDLEVMVELAAE 88
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D D L EA + + ++K LD+ E+ LLSG YD+ AVI+I AGAGG DA D+A+M
Sbjct: 89 EDDPDT--LAEAEAEVVSIHKTLDELEVRTLLSGEYDERDAVITIRAGAGGVDAADFAEM 146
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW E Y T+V++ S EEAG+KS EV G +AYG LS E GTHR+VR SPF
Sbjct: 147 LMRMYLRWAENNGYSTKVMDTSYAEEAGLKSVTFEVAGPFAYGTLSVEGGTHRLVRISPF 206
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
+ +G RQTSF+ EV+PL+ ES D ++IPE DL+I R+ G GGQ+VN ++AVR+TH
Sbjct: 207 DNQGRRQTSFAAVEVIPLI--ESTDHIEIPENDLKIDVFRSSGPGGQSVNTTDSAVRMTH 264
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
+PTG V +E+SQ+ N+ AL ++++LL++ + + A+E K++ GD VKA WG Q+R+
Sbjct: 265 LPTGTVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAGD-VKASWGDQMRS 323
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
YV +PY++VKD+RT ++ + SV DGE+ FI + ++++
Sbjct: 324 YVLNPYQMVKDLRTEYQEGNPSSVFDGEISGFIDAGIRWR 363
>gi|269976501|ref|ZP_06183486.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
gi|269935302|gb|EEZ91851.1| peptide chain release factor 2 [Mobiluncus mulieris 28-1]
Length = 378
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 243/379 (64%), Gaps = 11/379 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF L + ++A D VE + A LQ K++A+L +A+ WD++ AQ+ Q L+
Sbjct: 5 DFAPLIEKLQATFDTVEAVMDPALLQ---KKIADLTAQASAPDLWDDQENAQKITQTLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDA-----GLLEEAASIIKELNKALDQFE 116
+ + L KT+++D +V+L EE+ S D ++E+A + K L L E
Sbjct: 62 TQSDLERLQTMKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALE 121
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
+ LL+G YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ Y T+V++ S EEA
Sbjct: 122 VRTLLNGEYDERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEA 181
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKSA E++ YAYG LS E GTHR+ R SPFNA G RQTSF+ EV+PL+ E + +
Sbjct: 182 GIKSATFEIDAPYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLI-ETTDHID 240
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
+PE D++I R+ G GGQ+VN ++AVR+TH+PTG+ + +E+SQ+ N+ A+ L++
Sbjct: 241 VPESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQS 300
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
+LL++ +Q + K++ GD VKA WG Q+R+Y + +LVKD+RTGHE+++ +V DG+
Sbjct: 301 RLLLLRHQQEHEKKKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGD 359
Query: 357 LEPFIKSYLKYKYSMSLSA 375
L+ FI ++++ L A
Sbjct: 360 LDTFIDEGIRWRKHQQLHA 378
>gi|296129092|ref|YP_003636342.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
gi|296020907|gb|ADG74143.1| peptide chain release factor 2 [Cellulomonas flavigena DSM 20109]
Length = 371
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 238/359 (66%), Gaps = 4/359 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I + L ++AEL +A+ + WD+ AQ+ AL+ + ++ + + ++
Sbjct: 17 LESIETVSDPTALRAKIAELSEQASVPNLWDDPEAAQKVTSALSSAQSELERVDKLRGRI 76
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD T+V++ E D DA L EA + + + K L + E+ LL+G YD AV++I AG
Sbjct: 77 DDLETLVEMAAEED--DADTLAEAEAELVGIRKDLGELEIRTLLAGEYDVRDAVVTIRAG 134
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+MLLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G+LS E
Sbjct: 135 AGGVDAADFAEMLLRMYLRWAERHGYATSVLDTSYAEEAGLKSATFEVKAPYAFGHLSVE 194
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ V+IPE ++++ R+ G GGQ+V
Sbjct: 195 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSVEIPESEIKVDVFRSSGPGGQSV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ +E+ + K++ GD
Sbjct: 254 NTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQEEERAAKKELAGD- 312
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSAS 376
+KA WG Q+R+YV PY++VKD+RT HE + SV DG+++ FI++ ++++ + L S
Sbjct: 313 IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPASVFDGDIDDFIEAGVRWRRAQQLEGS 371
>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
17241]
gi|167665826|gb|EDS09956.1| peptide chain release factor 2 [Anaerotruncus colihominis DSM
17241]
Length = 374
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/366 (41%), Positives = 223/366 (60%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M F LR +EA ++E + G L ++LAELE + FW++ +Q+
Sbjct: 1 MLQFEELRLRLEAHRAELDEFAQAIGYDALRRKLAELEEQTTAPGFWNDVERSQKNQLET 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
V+ K+ DD +T++ L +E D + EA + ++ L+ +L+ L
Sbjct: 61 ARVRGKLEACDKLNALYDDTLTLIGLADE--ENDESVYSEALADVERFESDLETQKLSTL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+G YD A+++ AGAGGT+AQDWA ML RMY RW E+ + ++++ G+EAG+KS
Sbjct: 119 LTGEYDANNAIMTFHAGAGGTEAQDWAQMLYRMYTRWAERHGFTYKILDYLDGDEAGLKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A I + G AYG+L E G HR+VR SPF+A G R TSF+ EV+P LP++ V+I E
Sbjct: 179 ASILITGDNAYGFLRSEAGVHRLVRVSPFDASGRRHTSFASVEVLPELPDDH-SVEINPE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+++ R+ G GGQ++NK +AVR+THIPTG+ V C ERSQ N+ + L AKL+
Sbjct: 238 DIKMDVFRSSGAGGQHINKTSSAVRLTHIPTGIVVSCQNERSQFQNREMCMKMLTAKLVE 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I E + + I +I+G+ ++ WG QIR+YVF PY L KD RTG E+ +I +VMDG+L+ F
Sbjct: 298 IKEREHLANINEIKGEQMQIAWGSQIRSYVFMPYTLAKDHRTGFESGNINAVMDGDLDGF 357
Query: 361 IKSYLK 366
I +YLK
Sbjct: 358 INAYLK 363
>gi|227874895|ref|ZP_03993048.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
gi|306818191|ref|ZP_07451922.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
gi|307701756|ref|ZP_07638770.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
gi|227844670|gb|EEJ54826.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35243]
gi|304649155|gb|EFM46449.1| peptide chain release factor RF2 [Mobiluncus mulieris ATCC 35239]
gi|307613014|gb|EFN92269.1| peptide chain release factor 2 [Mobiluncus mulieris FB024-16]
Length = 378
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/379 (41%), Positives = 243/379 (64%), Gaps = 11/379 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF L + ++A D VE + A LQ K++A+L +A+ WD++ AQ+ Q L+
Sbjct: 5 DFAPLIEKLQATFDTVEAVMDPALLQ---KKIADLTAQASAPDLWDDQENAQKITQTLSA 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDA-----GLLEEAASIIKELNKALDQFE 116
+ + L KT+++D +V+L EE+ S D ++E+A + K L L E
Sbjct: 62 TQSDLERLQTMKTRLEDFAALVELGGEELMSEDGRADGQAIMEDAEATYKTLAADLAALE 121
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
+ LL+G YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ Y T+V++ S EEA
Sbjct: 122 VRTLLNGEYDERFAVVTIRSGAGGVDAADFAQMLLRMYLRWAERHGYPTKVMDTSYAEEA 181
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKSA E++ YAYG LS E GTHR+ R SPFNA G RQTSF+ EV+PL+ E + +
Sbjct: 182 GIKSATFEIDAPYAYGRLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLI-ETTDHID 240
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
+PE D++I R+ G GGQ+VN ++AVR+TH+PTG+ + +E+SQ+ N+ A+ L++
Sbjct: 241 VPESDIKIDVFRSSGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQS 300
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
+LL++ +Q + K++ GD VKA WG Q+R+Y + +LVKD+RTGHE+++ +V DG+
Sbjct: 301 RLLLLRHQQEHEKKKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGHESNNPDAVFDGD 359
Query: 357 LEPFIKSYLKYKYSMSLSA 375
L+ FI ++++ L A
Sbjct: 360 LDAFIDEGIRWRKHQQLHA 378
>gi|253580007|ref|ZP_04857274.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39B_FAA]
gi|251848526|gb|EES76489.1| peptide chain release factor 2 [Ruminococcus sp. 5_1_39BFAA]
Length = 343
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 215/337 (63%), Gaps = 3/337 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+++ ELE + FWD+ +Q+ ++ L D+KD + + T+M+D T++++ E
Sbjct: 5 EQKVEELEREMEAPDFWDDAEVSQKKMKELKDMKDDMETYQNLVTQMEDMETMIEMGYE- 63
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L+ E ++ E K D + LLSG YD E A+I + AGAGGT+A DW ML
Sbjct: 64 -ENDPALIPEIQEMLDEFQKDFDNIRIKTLLSGEYDSENAIIKLNAGAGGTEACDWCGML 122
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
RMY RW +K+ + V++ G+EAGIKS +V G AYGYL EKG HR+VR SPFN
Sbjct: 123 YRMYSRWADKKGFTLEVLDYLDGDEAGIKSVTFQVNGTNAYGYLKSEKGVHRLVRISPFN 182
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A G RQTSF +VMP + ++ +DV+I ++++ I R+ G GGQ++NK +A+RITH P
Sbjct: 183 AAGKRQTSFVSCDVMPDIKKD-LDVEINDDEIRIDTYRSSGAGGQHINKTSSAIRITHYP 241
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V+C ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ WG QIR+YV
Sbjct: 242 TGIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYV 301
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
PY +VKD RT ET ++ +V+DG ++ FI +YLK+
Sbjct: 302 MQPYTMVKDHRTNEETGNVDAVLDGGIDIFINAYLKW 338
>gi|167748494|ref|ZP_02420621.1| hypothetical protein ANACAC_03238 [Anaerostipes caccae DSM 14662]
gi|317471975|ref|ZP_07931307.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
gi|167652486|gb|EDR96615.1| peptide chain release factor 2 [Anaerostipes caccae DSM 14662]
gi|316900379|gb|EFV22361.1| peptide chain release factor 2 protein [Anaerostipes sp. 3_2_56FAA]
Length = 367
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/367 (40%), Positives = 235/367 (64%), Gaps = 3/367 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + L+ + + + +E++ S GL++ ++ + +LE+ FW++ E+Q+ ++ +
Sbjct: 1 MIELDQLKYSLNSYREPLEKLSGSLGLEEKKERIEQLELDMEAPGFWEDLEESQKVVREV 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD++ K + +D T++++ E + + + A E A + ++ L
Sbjct: 61 KGLKDQVEGYEGLKGQFEDIETLIEMASEEEDEELAAETQEA--FAEFETAYENLRISTL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YDK A++S+ AGAGGT++ DWA ML RMY RW K+ ++T+V++ G+EAGIKS
Sbjct: 119 LSGEYDKNNAILSLHAGAGGTESCDWAGMLYRMYTRWAGKKGFETKVIDYLDGDEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+E++G AYGYL E+G HR+VR SPFNA G RQTSF+ +VMP + +E ++V+I +E
Sbjct: 179 VTVEIKGENAYGYLRSERGVHRLVRISPFNAAGKRQTSFASCDVMPEI-DEDLNVEIADE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+ I RA G GGQ++NK ++A+RITHIPTG+ V+C ERSQ NK +A+ LK KL +
Sbjct: 238 DIRIDTYRASGAGGQHINKTDSAIRITHIPTGIVVQCQNERSQHKNKDQAMKMLKTKLYL 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ E+Q ++ IRGD WG QIR+YV PY +VKD RT E+ + +V+DG+L+ F
Sbjct: 298 LKEQQHLEKLSDIRGDVGDNGWGSQIRSYVLQPYTMVKDHRTNKESGNPSAVLDGDLDGF 357
Query: 361 IKSYLKY 367
+ +YL +
Sbjct: 358 MNAYLAW 364
>gi|171741050|ref|ZP_02916857.1| hypothetical protein BIFDEN_00116 [Bifidobacterium dentium ATCC
27678]
gi|283455565|ref|YP_003360129.1| peptide chain release factor 2 [Bifidobacterium dentium Bd1]
gi|171276664|gb|EDT44325.1| peptide chain release factor 2 [Bifidobacterium dentium ATCC 27678]
gi|283102199|gb|ADB09305.1| prfB Bacterial Peptide Chain Release Factor 2 (RF-2)
[Bifidobacterium dentium Bd1]
Length = 380
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 242/365 (66%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L + ELE++AA+ WD+ AQ+ L+ V+
Sbjct: 8 FDYSQAIGEARAKYESISKALDVDRLTAQAKELEVQAAEPGLWDDPENAQKITSKLSAVQ 67
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L+ ++DD T+V+L E + DA LEEA + I+ + LD E+ LL G
Sbjct: 68 SQLKRLSSASQRIDDVETLVELGREEE--DADTLEEAKNEIEGIRHDLDDMEIQTLLDGE 125
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 126 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 185
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG +S E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + +P+ ++ +
Sbjct: 186 VDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDVPDSEIRV 244
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 245 DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 304
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI++
Sbjct: 305 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAG 363
Query: 365 LKYKY 369
+++++
Sbjct: 364 IRWRH 368
>gi|298244286|ref|ZP_06968092.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
gi|297551767|gb|EFH85632.1| peptide chain release factor 2 [Ktedonobacter racemifer DSM 44963]
Length = 337
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 219/325 (67%), Gaps = 3/325 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW + +AQ +Q L +++++ T++ D + + EE D + E A I
Sbjct: 5 FWSDNRKAQAHMQQLNALREEVTTWEQLATQLKDLQELALMLEE--EPDDDMQAEVAQSI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ + +++ E +LSG +D++ A++SI AG+GG DAQDWA+MLLRMY+RW ++ R++T
Sbjct: 63 HPIEEQIEKLEFALMLSGEHDEKNAILSIHAGSGGVDAQDWAEMLLRMYLRWADQHRFRT 122
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ + S GEEAGIKSA +E+EGR+AYGYL E GTHR++R SPF+A RQTSF+ E+M
Sbjct: 123 QIYDYSEGEEAGIKSATVEIEGRFAYGYLRSEAGTHRLIRLSPFDAAHRRQTSFAKVELM 182
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + E ++++ I ED+E+ R+ G GGQ+VNK ++AVR+ H+P+G+ V C ERSQL
Sbjct: 183 PDI-ENTIEISIRPEDIEVDTYRSTGAGGQHVNKTDSAVRMRHVPSGIVVTCQNERSQLQ 241
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ AL LKA+L + +++ E +++G+ V+A++G QIR+ + HPY + KD RT HE
Sbjct: 242 NREVALKILKARLFELEQKKHDEEAARLKGEHVQADFGTQIRSVIVHPYNIAKDHRTNHE 301
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
TSD + + G ++PFI +YL+ + S
Sbjct: 302 TSDTTAYLAGNVDPFIHAYLQEQAS 326
>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. F2365]
gi|67461157|sp|Q71WR9.1|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
monocytogenes serotype 4b str. F2365]
Length = 366
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 229/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L EE IK + +FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQEELEKDIKAYMATISEFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L ++ +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLR 362
>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
fusca YX]
Length = 375
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 225/350 (64%), Gaps = 4/350 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A L E+ +L ++AD W+++A AQ+ + L+ ++ +++ + + ++++
Sbjct: 17 LENIEAVLDLDAKRTEIEQLREQSADPELWNDQANAQKVTRRLSFLESEVSKVENIRSRI 76
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD + +L DA L EA + L K + E+ LLSGPYD+ A+ISI A
Sbjct: 77 DDLGVLFELA--AAENDAETLAEARRELAALRKDISDLEVRTLLSGPYDEREALISINAQ 134
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA DW ML RMY+RW E+ Y T + E S EEAGIKS V+ YAYG L GE
Sbjct: 135 AGGVDAADWTQMLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVVKAPYAYGMLRGE 194
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ + RQTSF+G +V+P++ E+S ++I E +L I R+ G GGQ V
Sbjct: 195 HGTHRLVRISPFDNQSRRQTSFAGVDVVPVV-EQSDHIEIDESELRIDVYRSSGPGGQGV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVRITH+PTG+ V C ERSQL N+ A+S L+AKLL ++ +E+ +RG++
Sbjct: 254 NTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQAKLLERKRQEEEAELAALRGES 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+A WG Q+RNYV HPY+ VKD+RTG ET + +V+DGE++ FI + +++
Sbjct: 314 ARA-WGTQMRNYVLHPYQSVKDIRTGVETGNTSAVLDGEIDEFINAGIRW 362
>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
gi|259585228|sp|C5CGS4.1|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
Length = 370
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 224/363 (61%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y ++ D+ E I+ + + +++++L+ +E + +D S W ++ A + Q ++
Sbjct: 4 YETNARIQELRDKFENIKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALR 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+++LL + ++ V+L+EE D LE ++KE + +FEL LLS P
Sbjct: 64 SQLDLLNKVQELFENIDIAVELSEE----DESYLENLNELLKEAEDMVKEFELNILLSSP 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E+ YK +E+ GEEAGIKSA I
Sbjct: 120 YDAYNAYLSVHPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATIN 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+ G YAYG L E G HR+VR SPF+A R TSF+ V P + ++ +++ I EDL+I
Sbjct: 180 IAGPYAYGKLKYEAGVHRLVRISPFDANHRRHTSFASVSVFPEM-DDDVEIDIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RAGG GGQ+VN+ E+AVRITHIPTG+ V C ERSQ NK A+ LKAKL + E
Sbjct: 239 DTYRAGGAGGQHVNRTESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELE 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ E ++ G+ WG QIR+YVF PY +VKD RT +ET D+ +VMDG ++ FI+
Sbjct: 299 KKRQEKMKLMGEQKDIAWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKE 358
Query: 365 LKY 367
L +
Sbjct: 359 LLF 361
>gi|148272488|ref|YP_001222049.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830418|emb|CAN01353.1| peptide chain release factor RF-2 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 367
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 234/355 (65%), Gaps = 6/355 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
D IR+ G+++L++E+ EL +A + WD+ +AQ+ L+ + ++ + + +
Sbjct: 15 DTYSNIRSVIGVERLQQEVEELSAQAGEPDLWDDTEKAQKVTSDLSHRQSELKRIDELQR 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD +V EM D EEA + + K +D+ E+ LL+G +D AV++I
Sbjct: 75 RLDDLDVLV----EMAKDDEESAEEAVVELAGITKIMDELEVQTLLNGEFDPRPAVVTIR 130
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGG DA D+A+ML+RMY+RW E+ Y V++ S EEAGIKSA E++ YA+G LS
Sbjct: 131 AGAGGVDAADFAEMLMRMYLRWAEQHDYSATVLDTSYAEEAGIKSATFEIDAPYAFGTLS 190
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
E GTHR+VR SPFN+ G RQTSF+ EV+PL+ E++ ++IPE ++ + R+ G GGQ
Sbjct: 191 VEAGTHRLVRMSPFNSAGKRQTSFAAVEVVPLI-EQTESIEIPENEMRVDVFRSSGPGGQ 249
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VN ++AVRITH+PTG+ V C E+SQ+ N+ AL L+++LL++ EQ A+ K++ G
Sbjct: 250 SVNTTDSAVRITHLPTGIVVTCQNEKSQIQNRAAALRVLQSRLLLVQREQEAATKKELAG 309
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+ + A WG Q+R+YV PY++VKD+RT HE ++ +V DG+L+ FI + ++++ S
Sbjct: 310 N-ITASWGDQMRSYVLAPYQMVKDLRTEHEVNNPSNVFDGDLDGFISAGIRWRKS 363
>gi|339441273|ref|YP_004707278.1| hypothetical protein CXIVA_02090 [Clostridium sp. SY8519]
gi|338900674|dbj|BAK46176.1| hypothetical protein CXIVA_02090 [Clostridium sp. SY8519]
Length = 335
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 218/330 (66%), Gaps = 5/330 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FW++ E+ + Q L KD I + K M+D ++++ E D ++
Sbjct: 1 MEAPD--FWNDPEESSKKTQELKSKKDDIAVYQKLKGLMEDMEVMIEMGNE--ENDPSVI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ ++L + +++ ++ LLSG YD+ A++++ +GAGGT+A DW ML RMY RW
Sbjct: 57 PELEAMAEDLKQTMEETKVKTLLSGEYDRNNAIVTLHSGAGGTEACDWVSMLYRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E + ++ V++ G+EAGIKS +V G A+G L E+G HR+VR SPFNA G RQTS
Sbjct: 117 ESKGFQVEVLDYLDGDEAGIKSVTFQVNGENAFGLLKSERGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ +VMP + +E +D++I +ED+ + R+ G GGQ++NK +A+RITH+PTG+ V+C
Sbjct: 177 FASCDVMPEIDQE-IDIEIRDEDIRVDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LK+KL ++ +E+ A++ IRG+ WG QIR+YV PY +VK
Sbjct: 236 NERSQHMNKDKAMQMLKSKLYLLEQEKNAAKQADIRGEVTDIGWGNQIRSYVMQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
D+RTG ET ++ SVMDG L+PFI +YLK++
Sbjct: 296 DLRTGEETGNVSSVMDGNLDPFINAYLKWQ 325
>gi|387928642|ref|ZP_10131320.1| peptide chain release factor 2 [Bacillus methanolicus PB1]
gi|387588228|gb|EIJ80550.1| peptide chain release factor 2 [Bacillus methanolicus PB1]
Length = 327
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/321 (46%), Positives = 212/321 (66%), Gaps = 3/321 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD++ +AQ + +KD +N D +++ +L +E DA L EE + +
Sbjct: 6 FWDDQQKAQTIINEANGLKDLVNEFNDLNETLENLDLTYELVKE--ENDAELKEELENEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K+ K ++QFEL LL+ PYDK A++ + GAGGT++QDW MLLRMY RW EK+ +K
Sbjct: 64 KDFTKRVNQFELQLLLNEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF EVM
Sbjct: 124 ETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P +E ++++I EDL+I R+ G GGQ+VN ++AVRITHIPTGV V C ERSQ+
Sbjct: 184 PEFNDE-IEIEIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVVTCQTERSQIK 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A++ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY LVKD RT E
Sbjct: 243 NRERAMNMLKAKLYQKKIEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
++ +VMDG+++PFI +YL+
Sbjct: 303 IGNVQAVMDGDIDPFINAYLR 323
>gi|423076128|ref|ZP_17064842.1| peptide chain release factor 2 [Desulfitobacterium hafniense DP7]
gi|361852945|gb|EHL05143.1| peptide chain release factor 2 [Desulfitobacterium hafniense DP7]
Length = 314
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 210/311 (67%), Gaps = 4/311 (1%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQF 115
+Q L+ ++K+ + ++DD +T+ ++ EE D + LEE I L + LD
Sbjct: 1 MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEG---ILALQQRLDGL 57
Query: 116 ELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEE 175
EL LLSGPYD+ A++++ AGAGGT+AQDW ML RMY+R+GE+ YK ++ G+E
Sbjct: 58 ELEILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDE 117
Query: 176 AGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDV 235
AGIKSA + G A+GYL EKG HR+VR SPF+A G R TSF+ +V+P + E++ ++
Sbjct: 118 AGIKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEI 177
Query: 236 QIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLK 295
QIP EDL++ RA G GGQ+VNK +AVRITH+PTG+ V+ ERSQ+ N+ L L+
Sbjct: 178 QIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQ 237
Query: 296 AKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDG 355
AKLL + +Q+ EI +IRG+ + WG QIR+YVFHPY +VKD RT ET++ +VMDG
Sbjct: 238 AKLLELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDG 297
Query: 356 ELEPFIKSYLK 366
E++ FI +YL+
Sbjct: 298 EIDQFIAAYLQ 308
>gi|89897615|ref|YP_521102.1| hypothetical protein DSY4869 [Desulfitobacterium hafniense Y51]
gi|89337063|dbj|BAE86658.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 315
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/311 (47%), Positives = 210/311 (67%), Gaps = 4/311 (1%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQF 115
+Q L+ ++K+ + ++DD +T+ ++ EE D + LEE I L + LD
Sbjct: 2 MQELSYQQEKVKTYYTLQQQLDDLLTLYQMAVEEKDESLEPELEEG---ILALQQRLDGL 58
Query: 116 ELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEE 175
EL LLSGPYD+ A++++ AGAGGT+AQDW ML RMY+R+GE+ YK ++ G+E
Sbjct: 59 ELEILLSGPYDRNNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDE 118
Query: 176 AGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDV 235
AGIKSA + G A+GYL EKG HR+VR SPF+A G R TSF+ +V+P + E++ ++
Sbjct: 119 AGIKSATLSFAGENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEI 178
Query: 236 QIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLK 295
QIP EDL++ RA G GGQ+VNK +AVRITH+PTG+ V+ ERSQ+ N+ L L+
Sbjct: 179 QIPPEDLKVDTYRASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQ 238
Query: 296 AKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDG 355
AKLL + +Q+ EI +IRG+ + WG QIR+YVFHPY +VKD RT ET++ +VMDG
Sbjct: 239 AKLLELKRKQQEDEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDG 298
Query: 356 ELEPFIKSYLK 366
E++ FI +YL+
Sbjct: 299 EIDQFIAAYLQ 309
>gi|269955834|ref|YP_003325623.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
15894]
gi|269304515|gb|ACZ30065.1| peptide chain release factor 2 [Xylanimonas cellulosilytica DSM
15894]
Length = 370
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 239/359 (66%), Gaps = 4/359 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
++ A +E I + L+ ++A L +A+ WD+ AQ+ AL+ + ++N
Sbjct: 9 EIRALRSTLESIEGVSDPVALQAKIAVLSEQASVPDLWDDPEAAQKITSALSATQAELNR 68
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++DD T+V+L +EM D+ L EA + + + K LD E+ LLSG YD
Sbjct: 69 VKSLGRRIDDVETLVELGQEMGDEDS--LTEAEAEVVGIRKDLDALEVRTLLSGEYDARD 126
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I AGAGG DA D+A+ML+RMY+RW E+ + T+V++ S EEAG+KSA EV Y
Sbjct: 127 AVVTIRAGAGGVDAADFAEMLMRMYLRWAERHGFPTKVMDTSYAEEAGLKSATFEVNAPY 186
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
A+G LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ V+IPE ++++ R+
Sbjct: 187 AFGNLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDSVEIPESEIKVDVFRS 245
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ +++ A++
Sbjct: 246 SGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRQQEEAAK 305
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
K++ GD +KA WG Q+R+YV PY++VKD+RT HE+ + +V DG ++ FI++ ++++
Sbjct: 306 KKELAGD-IKASWGDQMRSYVLQPYQMVKDLRTEHESGNTAAVFDGAIDEFIEAGIRWR 363
>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 369
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/351 (45%), Positives = 232/351 (66%), Gaps = 23/351 (6%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQET----------LQALTDVKDKINLLTDFKTKM 77
++LE+E+ +L+ AD +FW++ +AQE L+ + V +KIN L D+
Sbjct: 27 EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDEKINNLLDY---- 82
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+T++++ E D L E +KE+ K + + EL LLS D + A++++ AG
Sbjct: 83 ---ITLLEMEE-----DQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAG 134
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
+GG +A DW +MLLRMY RW EK+ Y+ +V+ + AG+KSA + ++G YAYGYL GE
Sbjct: 135 SGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATVIIKGPYAYGYLKGE 194
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
+G HR+VR SPF+A R TSFS V+P + +E + V+I EEDL I RAGG GGQ+V
Sbjct: 195 QGVHRLVRISPFDANKRRHTSFSAVSVIPEI-DEDIKVEINEEDLRIDTYRAGGAGGQHV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++AVRITHIPTG+ V C ERSQL NK+KA++ LKAKL + E+R + K++ G+
Sbjct: 254 NKTDSAVRITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQLELEKRKEKQKELEGEK 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG QIR+YVF PY++VKD+RTG ET +I +VMDGE++ FI+SYLK+K
Sbjct: 314 KDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364
>gi|429757605|ref|ZP_19290137.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 181 str.
F0379]
gi|429174743|gb|EKY16212.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 181 str.
F0379]
Length = 375
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 235/356 (66%), Gaps = 8/356 (2%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A ++L ++AEL KAA WD+ A AQE L+ + +++ + + ++
Sbjct: 16 MENISAVVQPERLRAQIAELSQKAAAPDLWDDPAHAQEVTSQLSHRQSELDRVLAMEERI 75
Query: 78 DDAVTIVKL---TEEMDSTDA-GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVIS 133
DD IV + T E D DA + EA S + L + E+ LL G YD+ AVI+
Sbjct: 76 DDLEAIVDMARETAESDPADAEDIFAEAESDLASLKDDMSALEIRTLLDGEYDERNAVIT 135
Query: 134 ITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGY 193
I +GAGG DA D+A++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG
Sbjct: 136 IRSGAGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGT 195
Query: 194 LSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGK 252
LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ ES D ++IPE +L++ R+ G
Sbjct: 196 LSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLI--ESTDHIEIPESELKVDVFRSSGP 253
Query: 253 GGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQ 312
GGQ+VN ++AVR+THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K+
Sbjct: 254 GGQSVNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKE 313
Query: 313 IRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ GD VKA WG Q+R+YV PY++VKD+RT +E+ + +V DG+++ FI + ++++
Sbjct: 314 LAGD-VKASWGDQMRSYVLQPYQMVKDLRTEYESGNPQNVFDGDIDGFINAGIRWR 368
>gi|443289014|ref|ZP_21028108.1| Peptide chain release factor RF-2 [Micromonospora lupini str. Lupac
08]
gi|385887692|emb|CCH16182.1| Peptide chain release factor RF-2 [Micromonospora lupini str. Lupac
08]
Length = 373
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 229/354 (64%), Gaps = 4/354 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L +L ++ A LE +A+ WD++A+AQ+ L+ V +I+ L ++++DDA
Sbjct: 20 IEAVLNLDRLHEDKARLEQEASAPDLWDDQAKAQQVTSQLSYVNGEISKLGSLRSQLDDA 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+++L E D G+L E + I L K++ + E+ LLSG YD A+++I AGAGG
Sbjct: 80 RVLLELAEA--EADPGVLTEVEAEITSLTKSIQEMEVRTLLSGEYDSREALVAIRAGAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA V+ YAYG LS E GT
Sbjct: 138 VDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSATFAVKVPYAYGTLSVESGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G EV+P + E++ + IPE ++ + R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAGVEVLP-VTEQTDHIDIPENEVRVDVYRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG+ V C E+SQL NK AL L+A+LL ++ ++ ++ +
Sbjct: 257 DSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERKRQEEEEKMAGLKSGGTSS 316
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLS 374
WG Q+R+YV HPY++VKD+RT ET + V DGEL+ FI++ ++++ L+
Sbjct: 317 -WGDQMRSYVLHPYQMVKDLRTEQETGNPSGVFDGELDDFIEAGIRWRKQRQLA 369
>gi|212716462|ref|ZP_03324590.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660715|gb|EEB21290.1| hypothetical protein BIFCAT_01386 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 376
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 241/365 (66%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L + +LE++AA+ WD+ AQ+ L+ V+
Sbjct: 4 FDFSQAIGEARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDDPENAQKVTSKLSAVQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L+ ++DD T+V+L +E D DA L EA S ++ + L E+ LL G
Sbjct: 64 SQLKRLSSASQRIDDVETLVELGQEED--DADTLAEARSEVESIQNDLADMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG +S E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + +P+ ++ +
Sbjct: 182 VDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDVPDSEIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|317121051|ref|YP_004101054.1| peptide chain release factor 2 (bRF-2) [Thermaerobacter marianensis
DSM 12885]
gi|315591031|gb|ADU50327.1| bacterial peptide chain release factor 2 (bRF-2) [Thermaerobacter
marianensis DSM 12885]
Length = 416
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 220/362 (60%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L + + A R+EE+R L +E+ +E D SFWD AQ+ ++ L +K
Sbjct: 5 LLRRIRALRPRLEELRDDLDLAGKRREIERIEQAMTDPSFWDEPDRAQQQVRQLKVLKGP 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + ++DD + +L E D ++ E I + + L Q EL LL+GPYD
Sbjct: 65 VEHYEALERQLDDLQVLAELAAE--EADVSVIPELEEGIAKAEEGLRQLELDLLLNGPYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++S+ GAGGT++QDWA ML RMY RW E Y+ V++ GEEAGIKS V
Sbjct: 123 GYDAIVSLHPGAGGTESQDWAQMLWRMYTRWAEDHGYQVEVLDLLEGEEAGIKSVTFAVR 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL E G HR+VR SPF+A G R TSF+ +V+P L +S +++I EDL I
Sbjct: 183 GPNAYGYLRSEHGVHRLVRISPFDAAGRRHTSFASVDVLPDL-GDSPEIEIRPEDLRIDV 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RAGG GGQ+VNK E+AVRI H+PTG+ C ERSQ AN+ A+ LKA+L EEQR
Sbjct: 242 FRAGGHGGQHVNKTESAVRIVHLPTGIVATCQNERSQHANRETAMKILKARLARYYEEQR 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
EI +RGD + WG QIR+YVF PY LVKD RTG E ++ +VMDG L+PFI +YL+
Sbjct: 302 LKEIAALRGDVGEIAWGNQIRSYVFQPYTLVKDHRTGVEVGNVQAVMDGHLDPFINAYLR 361
Query: 367 YK 368
++
Sbjct: 362 WE 363
>gi|229829544|ref|ZP_04455613.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
14600]
gi|229791533|gb|EEP27647.1| hypothetical protein GCWU000342_01640 [Shuttleworthia satelles DSM
14600]
Length = 379
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 237/375 (63%), Gaps = 10/375 (2%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAEL--EMKAADSSFWDNRAEAQETLQALTDVK 64
+R+++E+ + + E+ + L+ +++ EL EM+A D FW++ + ++ L +K
Sbjct: 8 MRQELESYKEPLAEVTRALDLESKHQKIEELNREMEAPD--FWNDADLSARKMKELKSLK 65
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
D + + K +++ ++ + E D DA ++ E ++ ++ + ++ + LLSG
Sbjct: 66 DDVEIADKLKNSIEEIGMLMDMANEED--DADMVGEIRLMMDQMKEDFERVRIKTLLSGE 123
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
+D A++++ AGAGGT+A DW ML RMY RW Q ++ ++ G+EAGIK+ +
Sbjct: 124 FDANNAIVTLHAGAGGTEACDWTAMLYRMYTRWAAAQGFEVEELDYLDGDEAGIKAVTFQ 183
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V G AYGYL EKG HR+VR SPFNA G RQTSFS +VMP L E+ +DV++ +ED+ I
Sbjct: 184 VNGENAYGYLKSEKGVHRLVRISPFNANGKRQTSFSSCDVMPEL-EQDLDVEVKDEDIRI 242
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
R+ G GGQ++NK +A+RITH PTG+ V+C ERSQ NK KA+ LKAKL ++ E
Sbjct: 243 DTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQHMNKDKAMQMLKAKLYMLKME 302
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ ++ + IRG+ WG QIR+YVF PY +VKD+RTG ET ++ +VMDG++ FI +Y
Sbjct: 303 EQKAKAEGIRGEVTDIAWGNQIRSYVFQPYTMVKDLRTGEETGNVSAVMDGDINLFINAY 362
Query: 365 LKYKYSMSLSASDAN 379
L++ +SL D N
Sbjct: 363 LRW---LSLGCPDRN 374
>gi|325679774|ref|ZP_08159348.1| peptide chain release factor 2 [Ruminococcus albus 8]
gi|324108589|gb|EGC02831.1| peptide chain release factor 2 [Ruminococcus albus 8]
Length = 378
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 230/362 (63%), Gaps = 2/362 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
NL+ +++A ++E+ ++ +++ EL KAA+ FWD+ ++Q LQ +++
Sbjct: 8 NLKSELDACRPLIKELHDVYDIENAAEKIEELHEKAAEPGFWDDPEKSQVVLQQTRNLEG 67
Query: 66 KINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
K+ F DD ++++ EE + T A L+EE + + +L LD L LL+G
Sbjct: 68 KVERYNKFNGAADDIEVMIEMAGEEDEDTQAELVEEIKAELDKLKADLDAASLETLLTGE 127
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A+++ AGAGGT+AQDW +ML+RMY +W + + ++++ G +AGIKS +
Sbjct: 128 YDHSNAILNFHAGAGGTEAQDWTEMLIRMYTKWADSHGFNAKIMDILEGGDAGIKSCSMF 187
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+EG AYGYL E G HR+VR SPF++ G R TSFS EVMP L +++++V+I ED+E+
Sbjct: 188 IEGENAYGYLKSESGIHRLVRISPFDSSGSRHTSFSAVEVMPEL-DDNIEVEIRPEDIEM 246
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ++NK +AVR+ H PTG+ C +RSQ N+ A+ LKAKL+ I E
Sbjct: 247 EVYRASGAGGQHINKTSSAVRLIHKPTGIVTACQTQRSQFQNRDYAMKMLKAKLIEIKER 306
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ +I+ I+G + WG QIR+YVF PY LVKD+RTG+E +++ +VMDG+L+ FI +Y
Sbjct: 307 EHLEKIEDIKGVQKEIAWGSQIRSYVFMPYTLVKDLRTGYEYNNVKAVMDGDLDGFINAY 366
Query: 365 LK 366
LK
Sbjct: 367 LK 368
>gi|225350864|ref|ZP_03741887.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158320|gb|EEG71562.1| hypothetical protein BIFPSEUDO_02438 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 376
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 240/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L + +LE++AA+ WDN AQ+ L+ V+
Sbjct: 4 FDFSQAIGEARAKYESISKALDVDRLTAQAKDLEVQAAEPGLWDNPENAQKVTSKLSAVQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L ++DD T+V+L +E + DA L EA S ++ + L E+ LL G
Sbjct: 64 SQLKRLASASQRIDDVETLVELGQEEE--DADTLAEAQSEVESIQNDLADMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG +S E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + +P+ ++ +
Sbjct: 182 VDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDVPDSEIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
gi|409912720|ref|YP_006891185.1| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
gi|39984267|gb|AAR35654.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
Length = 372
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 226/355 (63%), Gaps = 3/355 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
VE +R+ ++R S + +++ ELE + A FWDN EAQ+ L+ T ++ I+L
Sbjct: 9 VENFGERIAKLRGSLDIDSKREDIQELEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLW 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ DD +++L EE + D L+E ++ L + ++ E ++LSGP+DK
Sbjct: 69 DRLNRQADDIRVLIELGEE--AQDEATLDEVRALNDSLEREVEGAEFQRMLSGPHDKNSC 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
+SI AGAGGT+AQDWA+MLLRMY+R+ E++ +KT + + G+EAG+KSA V+G YA
Sbjct: 127 FVSINAGAGGTEAQDWAEMLLRMYLRYCERKGWKTEITDFQAGDEAGVKSATFTVDGEYA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL E G HR+VR SPF++ R TSF+ V P + E+ ++++I E DL + R+
Sbjct: 187 YGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEI-EDDIEIKIAESDLRVDTYRSS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VN ++AVR+TH+PTG+ V C ERSQ NK AL L+AKL ++R +
Sbjct: 246 GAGGQHVNTTDSAVRLTHLPTGIVVACQCERSQHLNKATALRMLRAKLYEKELQEREVQA 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
++ G+ WG QIR+YV HPYK+VKD+RTG E+ + +V+DG LE F+ ++L
Sbjct: 306 SELAGEKKDIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGALEDFVVAFL 360
>gi|407982835|ref|ZP_11163500.1| peptide chain release factor 2 [Mycobacterium hassiacum DSM 44199]
gi|407375566|gb|EKF24517.1| peptide chain release factor 2 [Mycobacterium hassiacum DSM 44199]
Length = 368
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 226/339 (66%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+ K + ELE AAD WD++ AQ+ L+ + ++ + D + ++DD + +L EE
Sbjct: 28 MRKRIKELEELAADPHLWDDQDRAQKITSELSRTQGELRRVEDLRRRLDDLPVLYELAEE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
+S DA +EA + +K L + ++ E+ LLSG YD+ A+++I +GAGG DA DWA+M
Sbjct: 88 ENSADAR--DEADAELKRLREDIEAMEVRTLLSGEYDQREALVTIRSGAGGVDAADWAEM 145
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW EK Y V++ S EEAGIKSA V YAYG LS E+GTHR+VR SPF
Sbjct: 146 LMRMYIRWAEKHGYPVEVLDTSYAEEAGIKSATFVVHAPYAYGTLSVEQGTHRLVRISPF 205
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ + RQTSF+ EV+P++ E++ + IPE ++ + R+ G GGQ+VN ++AVRITH+
Sbjct: 206 DNQSRRQTSFADVEVLPVV-EQTDHIDIPESEIRVDVYRSSGPGGQSVNTTDSAVRITHL 264
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQL NK+ A+ L+AKLL ++ +E+ ++ D A WG Q+R+Y
Sbjct: 265 PTGIVVTCQNEKSQLQNKLSAMRVLQAKLLERKRQEERAELDALKSDG-SASWGNQMRSY 323
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V HPY++VKD+RT +E + +V+DG+++ FI++ ++++
Sbjct: 324 VLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 362
>gi|148378178|ref|YP_001252719.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
3502]
gi|148287662|emb|CAL81727.1| peptide chain release factor 2 [Clostridium botulinum A str. ATCC
3502]
Length = 325
Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 210/324 (64%), Gaps = 4/324 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FW++ EAQ+ +KDK+ + ++D I+ L E + D + +E
Sbjct: 3 NPNFWNDIKEAQKITSEEKYLKDKLTKYNHLRNTIED---IISLCEMLSEEDDDMKKEII 59
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
S K + + D+F++ LLSG YD+ ++++ + GGTDAQDW DML RMY RW EK+
Sbjct: 60 SEYKNIKEETDRFKIETLLSGEYDRNNVIMTLHSEVGGTDAQDWTDMLFRMYTRWAEKEG 119
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+ ++++ E+AGIKS +++ G + YGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 120 FAVKIMDLLEAEDAGIKSVTLKITGEFVYGYLKSEKGIHRLVRISPFNANGKRQTSFASI 179
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L ++ +++I EDL+I RAGG GGQ+VNK E+AVRITH+PTG+ V+C ERS
Sbjct: 180 EVLPELTDDQ-EIEIRSEDLKIDTYRAGGAGGQHVNKTESAVRITHMPTGIIVQCQNERS 238
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVKD RT
Sbjct: 239 QHTNKETAMKVLKSKLVELKERSHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHRT 298
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
G ETS++ SVM+G++ FI YLK
Sbjct: 299 GAETSNVDSVMNGDINIFITQYLK 322
>gi|363548458|sp|Q88YL5.2|RF2_LACPL RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 377
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 221/359 (61%), Gaps = 5/359 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E V++ R S L L + + E E + A+ FWD++A AQ+ + +K K +
Sbjct: 16 IEEMQSAVDDFRGSLDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTF 75
Query: 71 TDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
++ D AV L+EE DA + E + + L Q+ L LL GPYD+
Sbjct: 76 KQLADEVGDLAVAYELLSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNN 132
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
A++ I GAGGT++QDW MLLRMY RW +K V+ G+EAGIKS + + G
Sbjct: 133 AILEIHPGAGGTESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHN 192
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL EKG HR+VR SPF+A G R TSF+ +VMP L ++++DV I EDL+I RA
Sbjct: 193 AYGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRA 251
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VNK +AVRITH+PTG+ V +RSQL N+ AL+ L+AKL EE++A E
Sbjct: 252 SGAGGQHVNKTSSAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKE 311
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
I+G+ + WG QIR+YVFHPY +VKD RT +E+ +VMDG+L+PF+ +YL++K
Sbjct: 312 RAAIQGEQMDIGWGSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 370
>gi|260663162|ref|ZP_05864054.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
gi|260552354|gb|EEX25405.1| peptide chain release factor 2 [Lactobacillus fermentum 28-3-CHN]
Length = 332
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 214/333 (64%), Gaps = 11/333 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTKMDDAVTIVKLTEEM--DSTDA 95
M A D FWD+ AQE + AL ++K + N LT + D V + LT EM D
Sbjct: 1 MTAPD--FWDDNQRAQEKVAALNELKKRRDNFLT-----LQDQVEELALTAEMLQAEPDP 53
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
L E + + + L + L QLL GPYD+ A++ I GAGGT+AQDW +MLLRMY+
Sbjct: 54 ELKAELDNNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYM 113
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW + + GEEAGIKS + ++G AYGYL EKG HR+VR SPF++ R
Sbjct: 114 RWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARR 173
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
TSF+ +VMP+L +ES++V+I DL + RA G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVT 232
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
ERSQL N+I A++ LK+KL + EE++A E QI G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYT 292
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
LVKD RTG+ET D++ VMDG+L+PFI +YL++
Sbjct: 293 LVKDARTGYETHDVIGVMDGDLDPFINAYLQWN 325
>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
thermoacetica ATCC 39073]
Length = 330
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 219/323 (67%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++RA A+ + LT +K+K+ + ++K D + +L + D L EE A +
Sbjct: 6 FWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLA--LAEDDHSLEEEIARDL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ ++ L LL+GPYD+ A++S+ GAGGT++QDWA MLLRMY RW E + Y+
Sbjct: 64 AAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRGYQV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+++ GEEAG+KSA I V+G AYGYL EKG HR+VR SPF+A G R TSF+ +V+
Sbjct: 124 ELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASVDVI 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + E +V+I +DL+I R+ G GGQ+VNK ++AVRITH+PTG+ V C ERSQ A
Sbjct: 184 PEV-EADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQHA 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N++ A+ L+A+L + +++ +E+ QIRG+ + WG QIR+YVFHPY LVKD RTG E
Sbjct: 243 NRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWGSQIRSYVFHPYSLVKDHRTGVE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
T +I +VMDG+++PFI++YL ++
Sbjct: 303 TGNIQAVMDGQIDPFIQAYLHWQ 325
>gi|339478754|gb|ABE95212.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bifidobacterium
breve UCC2003]
Length = 374
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 244/373 (65%), Gaps = 4/373 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + + I + + +L+ ++ +LE +AA WDN AQ+ L+ +
Sbjct: 4 FDFTQAIGEARAKYDSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSTAE 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ LT ++DD T+V+L +E D L+EA + I E+ K LDQ E+ LL G
Sbjct: 64 SQLKRLTSASQRIDDVETLVELGQE--EQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + V IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHVDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAG 359
Query: 365 LKYKYSMSLSASD 377
+++++ +A +
Sbjct: 360 IRWRHEQRRAAEN 372
>gi|374601529|ref|ZP_09674529.1| peptide chain release factor 2 [Paenibacillus dendritiformis C454]
gi|374392864|gb|EHQ64186.1| peptide chain release factor 2 [Paenibacillus dendritiformis C454]
Length = 340
Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 220/333 (66%), Gaps = 3/333 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
++ E K + FWD+ AQ + L +K + + + +D +++L +E
Sbjct: 2 ISNYEEKMSAPDFWDDNERAQGIISELNAIKGIVEEYSKLQQDHEDTQMMLELADE--EN 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D GL +E A +K+L + ++QFEL LLS PYDK A++ + GAGGT++QDW MLLRM
Sbjct: 60 DEGLAQELADSVKQLYERVEQFELQLLLSEPYDKMNAILELHPGAGGTESQDWGQMLLRM 119
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E++ +K V++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G
Sbjct: 120 YTRWAEQRGFKVEVLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSG 179
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF +V+P + ++ +D+++ EDL+I RA G GGQ++N ++AVRITHIPTG+
Sbjct: 180 RRHTSFVSCDVVPEITDD-VDIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGI 238
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ +A++ L++KL E++ ++ +IRGD + WG QIR+YVFHP
Sbjct: 239 VVTCQTERSQIKNRERAMTLLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHP 298
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y +VKD RT ET ++ +VMDG+++ FI++YL+
Sbjct: 299 YSMVKDHRTQVETGNVGAVMDGDIDEFIEAYLR 331
>gi|67461212|sp|Q927Y4.2|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 366
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 228/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L E IK + +FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQAELEKDIKAYVATISEFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L +E +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDE-IEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 362
>gi|389843547|ref|YP_006345627.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
gi|387858293|gb|AFK06384.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
Length = 370
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 155/370 (41%), Positives = 228/370 (61%), Gaps = 5/370 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y ++ ++ + IRA+ L++++++L E+E + +D S W+++ EA + +
Sbjct: 4 YETNSRIQELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYR 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
I LL D + + + +++ E+ D ++ +++ K + +FELT LLSG
Sbjct: 64 STIELLRDVEEEFES----IEIAVELSGEDESYVKHVEELVRSAEKKVREFELTILLSGE 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD ISI GAGGT++QDWA ML+RMY+RW E R+K +V++ GEEAGIKS I
Sbjct: 120 YDINNCFISIHPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTIN 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+ G +AYG + E G HR+VR SPF+A R TSF+ V P + +E +++I EDL+I
Sbjct: 180 LAGPHAYGKMKFEAGVHRLVRISPFDANHRRHTSFASVSVFPEM-DEVPEIEIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ NK A+ L AKL I E
Sbjct: 239 DTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIE 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ SE ++ GD + WG QIR+YVF PY LVKD RT ET DI SVM+GE++ FI+
Sbjct: 299 KKRSEKLKLMGDQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFIEKE 358
Query: 365 LKYKYSMSLS 374
L + S+ S
Sbjct: 359 LLFFSSIEKS 368
>gi|213692886|ref|YP_002323472.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384200108|ref|YP_005585851.1| peptide chain release factor [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|213524347|gb|ACJ53094.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320459060|dbj|BAJ69681.1| peptide chain release factor [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
Length = 374
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 240/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L+ ++ +LE +AA WD+ AQ+ L+ +
Sbjct: 4 FDFTQAIGEARAKYESIAKALDINRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAE 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L ++DD T+V+L E D+ L+EA S I E+ K LDQ E+ LL G
Sbjct: 64 SQLKRLNSASQRIDDVETLVELGHEEGDQDS--LDEAQSEIGEIQKDLDQMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|410594195|ref|YP_006950922.1| peptide chain release factor [Streptococcus agalactiae SA20-06]
gi|421531563|ref|ZP_15977944.1| peptide chain release factor 2 [Streptococcus agalactiae
STIR-CD-17]
gi|403643237|gb|EJZ04022.1| peptide chain release factor 2 [Streptococcus agalactiae
STIR-CD-17]
gi|410517834|gb|AFV71978.1| Peptide chain release factor [Streptococcus agalactiae SA20-06]
Length = 337
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 223/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS L EE + +L+K +D +E+T LLS PYD A++ I G+GGT+AQDW D+
Sbjct: 61 DDS----LKEELEENLMQLDKIMDAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
>gi|427391491|ref|ZP_18885897.1| peptide chain release factor 2 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732134|gb|EKU94946.1| peptide chain release factor 2 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 394
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 246/374 (65%), Gaps = 13/374 (3%)
Query: 15 SDRVEEIRASAG-------LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
S+ ++ +RA+ G +QL + EL ++AD + WD++ AQE L+ + ++
Sbjct: 23 SENIDRLRATLGQIEAVLNPEQLRARVDELTAQSADPNLWDDQDRAQEVTSQLSHAQAEL 82
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKE----LNKALDQFELTQLLSG 123
+ LT + ++DD ++++ +E TDA ++ ++E + K LD+ ++ LLSG
Sbjct: 83 DKLTGLEERLDDLEALLEIADEEAETDASSAKDLYGELREETTAVEKTLDELQIRTLLSG 142
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD+ AV++I +GAGG DA D+ +ML RMY+RWG ++ Y T+V+ S EEAGIKS
Sbjct: 143 KYDEREAVVTIRSGAGGVDAADFTEMLQRMYLRWGARRGYPTKVLNTSYAEEAGIKSTTF 202
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
EV YAYG L+GE GTHR+VR SPF+ + RQTSF+ EV+PL+ E++ + IPE D+
Sbjct: 203 EVSAPYAYGTLAGEAGTHRLVRISPFDNQARRQTSFAAVEVIPLI-EQTDHIDIPETDIR 261
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
I R+ G GGQ+VN ++AVRITH+PTG+ V +E+SQ+ N+ A+ L+++LLV+ +
Sbjct: 262 IDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLVLKQ 321
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
E+ E K++RGD VKA WG Q+R+YV PY++VKD+RTG+ET + +V DG+++ FI +
Sbjct: 322 EEEEREKKELRGD-VKASWGDQMRSYVLQPYQMVKDLRTGYETGNTDAVFDGDIDGFIDA 380
Query: 364 YLKYKYSMSLSASD 377
++++ + +A +
Sbjct: 381 EIRWRATGETTAEN 394
>gi|320530290|ref|ZP_08031358.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
gi|320137433|gb|EFW29347.1| peptide chain release factor 2 [Selenomonas artemidis F0399]
Length = 368
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 235/364 (64%), Gaps = 5/364 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ K +DA T+ ++ EE D T G + I E L+ +L LLSG
Sbjct: 64 GVDTYKALAAKYEDAETLYEMGIEENDPTMEGDIRAELDAIAE---GLETLQLEVLLSGE 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA +
Sbjct: 121 YDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFSVETADLQPGDEAGVKSASLF 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 181 IKGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVDIDMDDVRV 239
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E
Sbjct: 240 DYYRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQE 299
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ E+ ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++Y
Sbjct: 300 KKEEELAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAY 359
Query: 365 LKYK 368
L K
Sbjct: 360 LNAK 363
>gi|296330264|ref|ZP_06872745.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676131|ref|YP_003867803.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296152532|gb|EFG93400.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414375|gb|ADM39494.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 327
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 217/331 (65%), Gaps = 7/331 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++D+ +++T ++ + D+ L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGIKDYVN---SYK-KLNDSHEELQMTHDLLKEEPDSDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RWGE
Sbjct: 58 ELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 118 RRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C
Sbjct: 178 VSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD
Sbjct: 237 ERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 297 HRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|363899702|ref|ZP_09326210.1| peptide chain release factor 2 [Oribacterium sp. ACB1]
gi|395208290|ref|ZP_10397531.1| peptide chain release factor 2 [Oribacterium sp. ACB8]
gi|361958000|gb|EHL11303.1| peptide chain release factor 2 [Oribacterium sp. ACB1]
gi|394705871|gb|EJF13395.1| peptide chain release factor 2 [Oribacterium sp. ACB8]
Length = 378
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 234/377 (62%), Gaps = 6/377 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ ++ ++ + + L+ +K +AEL+ + FW + +A +
Sbjct: 1 MIEFDQFKTELNTKTEPLKALEQALDLENKQKRIAELDRMMEEPDFWSDAEKANRLSTEV 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD+ KT +D ++++ +E D ++ E ++ + ++ L+ T L
Sbjct: 61 RHLKDEAESFYQLKTSYEDIDALIQMGKE--EGDESVIPEIREMLSQFSEDLENMNTTLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD ++ + AGAGGT+A DWA +L RMY+RW E+ + ++++ G+EAGIKS
Sbjct: 119 LSGEYDSMNVILRLNAGAGGTEANDWAGILYRMYIRWAERHGFSVKILDYLDGDEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+EV G+YAYGYL E G HR+VR SPFNA+G RQTSF +VMP + E +D+++ EE
Sbjct: 179 VTMEVVGQYAYGYLRSEAGIHRLVRISPFNAQGKRQTSFVSCDVMPDI-ETEIDIEVREE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+++ RA G GGQ++NK +AVR+ HIPTG+ V C EERSQL NK KA+ LK KL +
Sbjct: 238 DIKMEVFRASGAGGQHINKTSSAVRLIHIPTGIVVACQEERSQLQNKNKAMQMLKTKLYL 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+E++ +++ IRG+ WG QIR+YV PY++VKD+RTG ET + +V+DG+++ F
Sbjct: 298 KEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRF 357
Query: 361 IKSYLKYKYSMSLSASD 377
I +YLK+ M L D
Sbjct: 358 ITAYLKW---MQLGCPD 371
>gi|163840102|ref|YP_001624507.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
33209]
gi|229470354|sp|A9WPT6.1|RF2_RENSM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|162953578|gb|ABY23093.1| peptide chain release factor 2 [Renibacterium salmoninarum ATCC
33209]
Length = 374
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 225/339 (66%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L K++A L +A WDN AEAQ+ L+ + K+ L ++DD +V+L E
Sbjct: 32 LRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETLTARIDDLEVLVELAES 91
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D+ L EA+ + L K+L + E+ LL+G YD+ AV++I +GAGG DA D+A+M
Sbjct: 92 EHDEDS--LAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIRSGAGGVDAADFAEM 149
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E GTHR+VR SPF
Sbjct: 150 LLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRISPF 209
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+PL+ E++ ++IP+ D+ + R+ G GGQ+VN ++AVR+TH+
Sbjct: 210 DNQGRRQTSFAAVEVIPLI-EQTDSIEIPDNDIRVDVFRSSGPGGQSVNTTDSAVRLTHL 268
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG V E+SQL N+ A L+++LL++ ++Q +E K + GD VKA WG Q+R+Y
Sbjct: 269 PTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQEDAEKKALAGD-VKASWGDQMRSY 327
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V +PY++VKD+RT HE + V+DG+++ FI + ++++
Sbjct: 328 VLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWR 366
>gi|291456213|ref|ZP_06595603.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213 =
JCM 1192]
gi|384197445|ref|YP_005583189.1| peptide chain release factor 2 [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|417942798|ref|ZP_12586060.1| Peptide chain release factor 2 [Bifidobacterium breve CECT 7263]
gi|291381490|gb|EFE89008.1| peptide chain release factor 2 [Bifidobacterium breve DSM 20213 =
JCM 1192]
gi|333110998|gb|AEF28014.1| peptide chain release factor 2 [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|376166517|gb|EHS85418.1| Peptide chain release factor 2 [Bifidobacterium breve CECT 7263]
Length = 374
Score = 300 bits (768), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/373 (41%), Positives = 244/373 (65%), Gaps = 4/373 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + + I + + +L+ ++ +LE +AA WDN AQ+ L+ +
Sbjct: 4 FDFTQAIGEARAKYDSIAKALDVDRLKADIKDLEAQAAAPGLWDNPDNAQKITSKLSAAE 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ LT ++DD T+V+L +E D L+EA + I E+ K LDQ E+ LL G
Sbjct: 64 SQLKRLTSASQRIDDVETLVELGQE--EQDQESLDEAQNEIGEIQKDLDQMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + V IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHVDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINNFIEAG 359
Query: 365 LKYKYSMSLSASD 377
+++++ +A +
Sbjct: 360 IRWRHEQRRAAEN 372
>gi|187250476|ref|YP_001874958.1| peptide chain release factor 2 [Elusimicrobium minutum Pei191]
gi|186970636|gb|ACC97621.1| Peptide chain release factor 2 [Elusimicrobium minutum Pei191]
Length = 371
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/366 (43%), Positives = 233/366 (63%), Gaps = 5/366 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+F +L+ +E S R++ A + + +++LA+LE + + SFW++ A++ +
Sbjct: 5 EFKDLKNKIEELSARIKNAGALIRVGEKKEKLAKLEAEISKESFWNDSDNARQVSKEADA 64
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
VK ++ + + +MDDAVT ++ EE T+ G E +S + ++ L + E L
Sbjct: 65 VKTELETFSALQKEMDDAVTYYEMALEENSETEMG---EISSFLIKIENELKEIEFKIKL 121
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
S P D+ A++ I AGAGGT++ DWA MLLRMY RW E K ++ + GEEAG+KS
Sbjct: 122 SDPADRLNAIMHIHAGAGGTESCDWAQMLLRMYTRWAENHGLKVKITDILPGEEAGVKSV 181
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
+ +EG YAYGYL E G HR+VR SPF+A R TSF+ +V+P + +E E+D
Sbjct: 182 SLMIEGLYAYGYLKSENGVHRLVRISPFDANSRRHTSFASCDVLPDIEDEIKIEI-EEKD 240
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
LE+ R+GG GGQNVNKVETAVRI HIPTG+ V C ERSQL N+ A+ L+AKL I
Sbjct: 241 LEVDTFRSGGAGGQNVNKVETAVRIKHIPTGIVVACQIERSQLQNRQTAMKMLRAKLYQI 300
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
+++ SE+++ G WG QIR+YVF PY+LVKD+RTG+ETS + +VMDG+L+ F+
Sbjct: 301 EADKKRSEMEKHYGQKGDIAWGHQIRSYVFMPYQLVKDLRTGYETSQVQAVMDGDLDAFM 360
Query: 362 KSYLKY 367
+SYL Y
Sbjct: 361 QSYLDY 366
>gi|300853467|ref|YP_003778451.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
gi|300433582|gb|ADK13349.1| peptide chain release factor B [Clostridium ljungdahlii DSM 13528]
Length = 329
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 211/328 (64%), Gaps = 3/328 (0%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
MK + +FWD+ AQE + +K+++ +++++DA + + EE D
Sbjct: 1 MKMQEPNFWDHLERAQEVTSEEKFLNEKLDMYNKLESRINDAEILAHIAEE--EEDVSDC 58
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
++ S ++++ +D+ ++ LLSG YDK A++++ G GGTDAQDW +MLLRMY RW
Sbjct: 59 KDILSEVEDIENIIDKLKIEILLSGEYDKNNAILNLHVGVGGTDAQDWTEMLLRMYTRWA 118
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK YK ++ ++AGIKS + + G +AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 119 EKSGYKVETLDILPADDAGIKSVSLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 178
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ EV+P L ++ D+ I EDL + R+ G GGQ+VNK E+AVRITHIPTG+ V+C
Sbjct: 179 FASVEVLPELTKDQ-DIDIRPEDLRVDTYRSSGAGGQHVNKTESAVRITHIPTGIVVQCQ 237
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ N+ A+ LK+KL+ + E +I+ + G+ WG QIR+YVFHPY LVK
Sbjct: 238 NERSQHYNRETAMLMLKSKLVELKERAHKEKIEDLAGELKDMGWGSQIRSYVFHPYTLVK 297
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RTG E ++ SVMDGE++ FI +YL+
Sbjct: 298 DHRTGVENGNVSSVMDGEIDNFILAYLR 325
>gi|404484151|ref|ZP_11019365.1| peptide chain release factor 2 [Clostridiales bacterium OBRC5-5]
gi|404342831|gb|EJZ69201.1| peptide chain release factor 2 [Clostridiales bacterium OBRC5-5]
Length = 351
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 218/348 (62%), Gaps = 4/348 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
EK++ EL+ + +FWD+ E+ + ++ +KD + K++ +D ++++ E
Sbjct: 5 EKKIIELDRAMEEPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE- 63
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L+ E +++ K +D+ ++ LL+G YD A++ + AGAGGT++ DW ML
Sbjct: 64 -ENDDSLIPEIEGMLEAFTKEIDELKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSML 122
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
RMY RW K+ Y V++ G+EAGIKS +++ G AYGYL E G HR+VR SPFN
Sbjct: 123 YRMYTRWAAKEGYTVEVLDMLEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFN 182
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A G RQTSF ++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITH+P
Sbjct: 183 AAGKRQTSFVSCDIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHLP 241
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TGV V+C ERSQ NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV
Sbjct: 242 TGVVVQCQNERSQFQNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYV 301
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
PY +VKD RTG E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 302 MQPYTMVKDHRTGAESGNVSAVMDGDIDKFIIAYLTWQ-SLGCPARNA 348
>gi|385811987|ref|YP_005848378.1| peptide chain release factor RF2 [Lactobacillus fermentum CECT
5716]
gi|299782886|gb|ADJ40884.1| Peptide chain release factor RF2 [Lactobacillus fermentum CECT
5716]
Length = 332
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/333 (47%), Positives = 213/333 (63%), Gaps = 11/333 (3%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKI-NLLTDFKTKMDDAVTIVKLTEEM--DSTDA 95
M A D FWD+ AQE + AL ++K + N LT + D V + LT EM D
Sbjct: 1 MTAPD--FWDDNQRAQEKVAALNELKKRRDNFLT-----LQDQVEELALTAEMLQAEPDP 53
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
L E + + L + L QLL GPYD+ A++ I GAGGT+AQDW +MLLRMY+
Sbjct: 54 ELKAELDDNFPGVQEHLRAYRLEQLLDGPYDQSDAILEIHPGAGGTEAQDWGEMLLRMYM 113
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW + + GEEAGIKS + ++G AYGYL EKG HR+VR SPF++ R
Sbjct: 114 RWANQHGFAVETANYEAGEEAGIKSVTLLIKGHNAYGYLHPEKGVHRLVRISPFDSAARR 173
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
TSF+ +VMP+L +ES++V+I DL + RA G GGQ++NK E+AVRITH+PTG+
Sbjct: 174 HTSFASVDVMPIL-DESIEVEIDPSDLRVDTFRASGAGGQHINKTESAVRITHLPTGIVT 232
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
ERSQL N+I A++ LK+KL + EE++A E QI G+ + WG QIR+YVFHPY
Sbjct: 233 SSQAERSQLQNRITAMNMLKSKLYELEEEKKAKERAQIEGEQREIGWGSQIRSYVFHPYT 292
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
LVKD RTG+ET D++ VMDG+L+PFI +YL++
Sbjct: 293 LVKDARTGYETHDVIGVMDGDLDPFINAYLQWN 325
>gi|402303929|ref|ZP_10823011.1| peptide chain release factor 2 [Selenomonas sp. FOBRC9]
gi|400376998|gb|EJP29884.1| peptide chain release factor 2 [Selenomonas sp. FOBRC9]
Length = 368
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 236/364 (64%), Gaps = 5/364 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ K +DA T+ ++ EE D + G + +I E L+ +L LLSG
Sbjct: 64 GVDTYKALAAKYEDAETLYEMGIEENDPSMEGDIRAELDLIAE---GLETLQLEVLLSGE 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA +
Sbjct: 121 YDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLF 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 181 IKGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVDIDMDDVRV 239
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E
Sbjct: 240 DYYRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQE 299
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ E+ ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++Y
Sbjct: 300 KKEEELAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAY 359
Query: 365 LKYK 368
L K
Sbjct: 360 LNAK 363
>gi|427406560|ref|ZP_18896765.1| peptide chain release factor 2 [Selenomonas sp. F0473]
gi|425707990|gb|EKU71031.1| peptide chain release factor 2 [Selenomonas sp. F0473]
Length = 368
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 237/363 (65%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ + L D+K
Sbjct: 4 DLKPTLSDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNRELVDLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ D + ++ + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKALAAKYEDAETLYEMG--IEENDPAMEDDIRAELDAIAAGLETLQLEVLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + +
Sbjct: 122 DANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 182 KGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVDIHMDDVRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E+
Sbjct: 241 YYRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++YL
Sbjct: 301 KEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYL 360
Query: 366 KYK 368
K
Sbjct: 361 NAK 363
>gi|311111708|ref|YP_003982930.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
gi|310943202|gb|ADP39496.1| peptide chain release factor RF2 [Rothia dentocariosa ATCC 17931]
Length = 375
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 239/351 (68%), Gaps = 3/351 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + L+ ++ L +L +A+ WD+ AQ AL+ + ++N LT+ +++DD
Sbjct: 20 IVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDV 79
Query: 81 VTIVKLTEEMDSTDA-GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+V+L + D + A LL EA + KEL K LD+ E+ LLSG YD+ AV++I +GAG
Sbjct: 80 EVMVELAQTEDESSAEDLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAG 139
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
G DA D+A+MLLRMY+RW EK Y T+V++ S EEAG+KS EV YA+G LS E G
Sbjct: 140 GVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAG 199
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 259
THR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IPE ++++ R+ G GGQ+VN
Sbjct: 200 THRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDALEIPESEIKVDVFRSSGPGGQSVNT 258
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ +EQ ++ K++ GD +K
Sbjct: 259 TDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQEDAKKKELAGD-IK 317
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
A WG Q+R+YV HPY++VKD+RTG+E + SV+DG L FI+ ++++ S
Sbjct: 318 ASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRWRAS 368
>gi|294055147|ref|YP_003548805.1| hypothetical protein [Coraliomargarita akajimensis DSM 45221]
gi|293614480|gb|ADE54635.1| hypothetical protein Caka_1616 [Coraliomargarita akajimensis DSM
45221]
Length = 386
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 227/363 (62%), Gaps = 5/363 (1%)
Query: 7 LRKDVEAASDRVEEI-RASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+R +E + R I R G+++LE E+ LE + A+ +FWD++ AQ+ + +K
Sbjct: 8 IRSQIEEITRRAGHIWRYLDGVKKLE-EIEALEAQMAEPTFWDDQQAAQKVIAEANRLKA 66
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSG 123
+N F ++DD +++L +EM D A +E + L LD EL L+G
Sbjct: 67 AVNPCRAFNAEVDDLQAMLELVDEMGGDPDAAAYEQEVLDAVHALLPKLDALELASFLTG 126
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
P+D A+++I AGAGGT++ DWADMLLRMY RWGE+ + + + GEEAGI SA I
Sbjct: 127 PHDSCNALLTIHAGAGGTESCDWADMLLRMYTRWGERAGFTVDIQDIMPGEEAGISSATI 186
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
+EG AYGY E+G HR+VR SPF++ R TSFS +V+ + E+ +D+ IPE ++
Sbjct: 187 RIEGPNAYGYAKAERGVHRLVRISPFDSNARRHTSFSSVDVIAEI-EDDIDLDIPESEIR 245
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
RA GKGGQ+VN+ E+AVR+THIPT + V C ERSQ+ NK A+ LK++L
Sbjct: 246 TDVYRASGKGGQHVNRTESAVRLTHIPTNLVVTCQNERSQIKNKATAMRTLKSRLYEKML 305
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+++ SE+++ G+ WG QIR+YVF PY+LV D+RTG + ++ VMDGEL+PF+ +
Sbjct: 306 DEKRSEMEKFYGEKGDIAWGNQIRSYVFQPYQLVTDLRTGLKEGNVQGVMDGELDPFVHA 365
Query: 364 YLK 366
+L+
Sbjct: 366 WLR 368
>gi|229817216|ref|ZP_04447498.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785005|gb|EEP21119.1| hypothetical protein BIFANG_02476 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 373
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 233/343 (67%), Gaps = 4/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L+ ++AELE +AA+ WD+ AQ+ L+ + ++ L ++DD T+V+L
Sbjct: 26 MDRLKAQIAELEQQAAEPGLWDDPENAQKVTSRLSAAQSQLKRLNSASQRIDDVETLVEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E + DA L EA +K++ LD E+ LL G YD+ AV++I +GAGG DA D+
Sbjct: 86 GQEEE--DADTLAEAQEEVKKIQSDLDDMEIQTLLDGEYDERSAVVTIRSGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +V+ YAYG LS E GTHR+VR
Sbjct: 144 AQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ + + G GGQ VN +AVRI
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPLV-EATDHIDIPDSDIRVDTYCSSGPGGQGVNTTYSAVRI 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E+ A + K++ GD +KA WG Q+
Sbjct: 263 THLPTGLVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKKKELAGD-IKASWGDQM 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 369
R+YV HPY++VKD+RTG+ETS +V DG+L+ FI++ +++++
Sbjct: 322 RSYVLHPYQMVKDLRTGYETSQTQAVFDGDLDGFIQAGIRWRH 364
>gi|406926880|gb|EKD63006.1| hypothetical protein ACD_52C00001G0007, partial [uncultured
bacterium]
Length = 332
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/335 (47%), Positives = 222/335 (66%), Gaps = 9/335 (2%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
EL +LE ++D W +++ A+ +Q + D+K +I + T D +V L+E+ S
Sbjct: 3 ELKKLEAASSDPDLWKDQSYARSLMQKIGDIKKQILQVERLTT---DVSGLVDLSED-GS 58
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
+GL EEA + E+ +Q EL L+GPYD A+++I G GGT+A DWA MLLR
Sbjct: 59 LVSGLDEEANKLAGEI----EQLELVIYLNGPYDTRNAIVAIHPGQGGTEAMDWAQMLLR 114
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY+R+ E+ Y T+V++ + GEEAGIKS V +V G +AYGYL GE GTHR+VRQSPFNA
Sbjct: 115 MYLRFCERWNYATQVIDDTPGEEAGIKSVVFKVGGPHAYGYLKGEAGTHRLVRQSPFNAD 174
Query: 213 GLRQTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 271
LRQTSF+ EV+P L E + D++I + DLE F + +GGQNV KV TAVR+TH PT
Sbjct: 175 KLRQTSFALVEVLPDLVEVDLPDIEIKDSDLEWQFFHSSSQGGQNVQKVSTAVRLTHKPT 234
Query: 272 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVF 331
G+ V ER Q AN+ AL L++KL + +E+ SE + ++G+ A WG QIR+YV
Sbjct: 235 GIVVTSQRERFQEANRKLALGLLRSKLWIKKQEELTSEKRSLKGEWSPASWGTQIRSYVL 294
Query: 332 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
HPYK+VKD+RT ETSD +V+DG+++ FI+S LK
Sbjct: 295 HPYKMVKDLRTSVETSDTDAVLDGKIDEFIESQLK 329
>gi|320095989|ref|ZP_08027602.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
str. F0338]
gi|319977060|gb|EFW08790.1| peptide chain release factor RF2 [Actinomyces sp. oral taxon 178
str. F0338]
Length = 372
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 231/342 (67%), Gaps = 4/342 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L ++AEL KAA WD+ A AQE AL+ + +++ + ++DD +V++
Sbjct: 26 ERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRMGERIDDLEAMVEMA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
E +L+EAA+ + L K + E+ LL G YD+ AVI+I +GAGG DA D+A
Sbjct: 86 GEDPDEAEEILDEAAADLDTLKKDVSDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E GTHR+VR S
Sbjct: 146 EILLRMYLRWAERHGYATKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
PF+ +G RQTSF+ EV+PL+ ES D ++IPE +L++ R+ G GGQ+VN ++AVR+
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLI--ESTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRM 263
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD VKA WG Q+
Sbjct: 264 THIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD-VKASWGDQM 322
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV PY++VKD+RT E+ + +V DG+++ FI + ++++
Sbjct: 323 RSYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWR 364
>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
parvula DSM 2008]
Length = 368
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/368 (39%), Positives = 237/368 (64%), Gaps = 3/368 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + +R+ + + Q E + L+++ +D +FWDN +A+E Q T +K+
Sbjct: 4 DLKPIISNLEERIYGMGIHFNIAQKEDRIFTLDVQMSDPTFWDNPDKAREISQEATQLKN 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ + ++DA ++++ +D D + E +K++ + L++ E+ LLSG Y
Sbjct: 64 AVESYKQLVSDIEDANVMLEMA--IDEDDLSMESEIKEYVKQIEETLEKQEVLLLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++ AGAGGT+AQDW ML+RMY+RW EK + ++++ G+EAGIKSA V
Sbjct: 122 DANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSGFSIELMDEQPGDEAGIKSATFLV 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G A+GYL EKG HR+VR SPF+A R TSF+ +VMP + ++++++ I +D+++
Sbjct: 182 KGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAVDVMPEI-DDTVEINIDMKDVQVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++NK ++AVR+TH PTG+ V+C +RSQ+ N+ +AL L+AKL + E+
Sbjct: 241 TYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRSQMQNREQALRLLRAKLFELELEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+A +QI G EWG QIR+YVFHPY LVKD RT ET ++ +VMDG L+PFI+ +L
Sbjct: 301 QAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRTSVETGNVQAVMDGNLDPFIEGFL 360
Query: 366 KYKYSMSL 373
K + ++++
Sbjct: 361 KKEANLTI 368
>gi|336113350|ref|YP_004568117.1| peptide chain release factor 2 [Bacillus coagulans 2-6]
gi|335366780|gb|AEH52731.1| peptide chain release factor 2 [Bacillus coagulans 2-6]
Length = 331
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 219/330 (66%), Gaps = 3/330 (0%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E + + +FWD++ EAQ+ + +K+ +N + +++ +D +L +E D
Sbjct: 1 MEERMLEPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTYELAKE--ENDQE 58
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L EE + ++ + L+++EL LL+GPYD A++ + GAGGT++QDW MLLRMY R
Sbjct: 59 LKEELEAELEGFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTR 118
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
WGEK+ +K ++ G+EAG+KS + +G AYGYL EKG HR+VR SPF+A G R
Sbjct: 119 WGEKKGFKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRH 178
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF EVMP + +++++V++ EDL + RA G GGQ++NK +AVRITHIPTG+ V
Sbjct: 179 TSFVSCEVMPEI-DDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVS 237
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
C ERSQ+ N+ +A+ LKAKL E++ ++ +IRG+ + WG QIR+YVFHPY +
Sbjct: 238 CQSERSQIQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYSM 297
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VKD RT ET ++ +VMDGE++PFI +YL+
Sbjct: 298 VKDHRTNVETGNVQAVMDGEIDPFIDAYLR 327
>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
Length = 378
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 223/338 (65%), Gaps = 4/338 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L K++AELE +AA W++ +AQ L+ ++ ++N + + +++D + +L E
Sbjct: 29 LRKQIAELEEQAAAPDLWNDPEKAQRVTSRLSHLQGEVNRIEELARRLEDLPVLFELAAE 88
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
+A L EA + +L + E+ LLSG YD+ A+I+I A AGG DA DWA M
Sbjct: 89 EGDQEA--LAEAERELAKLKSDIGALEVRTLLSGEYDEREALITINAQAGGVDAADWAQM 146
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY+RW E++ Y T + + S EEAGIKS V+ YAYG L GE GTHR+VR SPF
Sbjct: 147 LLRMYLRWAERKGYPTEIYDTSYAEEAGIKSVTFTVKAPYAYGTLKGEHGTHRLVRISPF 206
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ + RQTSF+G +VMP++ E++ D++I E+++ I R+ G GGQ VN ++AVRITH+
Sbjct: 207 DNQARRQTSFAGVDVMPVV-EQTDDIEINEDEIRIDVYRSSGPGGQGVNTTDSAVRITHL 265
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C ERSQL N+ A++ LKAKLL ++ A + ++RG+ + WG QIRNY
Sbjct: 266 PTGIVVSCQNERSQLQNRATAMAVLKAKLLERKRQEEAQAMAELRGETTTS-WGTQIRNY 324
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
V HPY++VKD+RTG E+ + +V+DG+L+ FI++ +++
Sbjct: 325 VLHPYQIVKDLRTGVESGNPTAVLDGDLDQFIEAEIRW 362
>gi|224475896|ref|YP_002633502.1| peptide chain release factor RF-2, major part [Staphylococcus
carnosus subsp. carnosus TM300]
gi|222420503|emb|CAL27317.1| peptide chain release factor RF-2, major part [Staphylococcus
carnosus subsp. carnosus TM300]
Length = 333
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 211/325 (64%), Gaps = 4/325 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEA 101
D +FWD++ +AQE + +K +N D + +++D + T L EE D LEE
Sbjct: 4 DPNFWDDQNKAQEIIDKNNALKHVVNGYRDLEAELEDMSATHELLAEEFDEDLKADLEEE 63
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
A+ K+ LDQFEL LL+GPYD A++ + GAGGT++QDWA MLLRMY R+ E+Q
Sbjct: 64 ANAFKD---KLDQFELQLLLNGPYDANNAILELHPGAGGTESQDWASMLLRMYQRYAEQQ 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K + G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 121 GFKVEFADYLPGDEAGVKSVTLVIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P +++++ +D+ + RA G GGQ++NK E+A+RITH PTG+ V ER
Sbjct: 181 CDVIPEFSNNEIEIEVNPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET ++ +VMDGE+ PFI++YL+
Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLR 325
>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|56749421|sp|Q6GIN7.1|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 369
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 227/360 (63%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K + V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>gi|414084914|ref|YP_006993625.1| peptide chain release factor 2 [Carnobacterium maltaromaticum
LMA28]
gi|412998501|emb|CCO12310.1| peptide chain release factor 2 [Carnobacterium maltaromaticum
LMA28]
Length = 353
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/345 (44%), Positives = 223/345 (64%), Gaps = 9/345 (2%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL---LTDFKTKMDDAVTI 83
L+ +E+++AE + + FWD+ +AQ + +K+K N L + K ++D + +
Sbjct: 10 LESMERDIAEFDELMGEPGFWDDGIKAQSVINEANIIKEKYNQFQQLAETKEELDLLLEM 69
Query: 84 VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
VK E+ + +E + LDQFEL LLS PYDK A+I + GAGGT++
Sbjct: 70 VKEEEDAELE-----KELEENLTTFLAVLDQFELDMLLSEPYDKNNAIIELHPGAGGTES 124
Query: 144 QDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
QDW MLLRMY RW EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+
Sbjct: 125 QDWGSMLLRMYTRWAEKKGFKVEYLDYQDGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRL 184
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VR SPF++ G R TSF +V+P + E+++D+QI +DL I RA G GGQ++NK ++A
Sbjct: 185 VRISPFDSAGRRHTSFVSIDVIPEM-EDNVDIQINTDDLRIDTYRASGAGGQHINKTDSA 243
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VRITH+PTGV V +RSQ+ NK +A+ LKAKL + E++ ++ +IRG+ + WG
Sbjct: 244 VRITHLPTGVVVASQAQRSQMKNKDQAMGMLKAKLYQLELEEKEKQMAEIRGEQKEIGWG 303
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
QIR+YVFHPY ++KD RT +ET ++ VMDG+L+PFI +YLK K
Sbjct: 304 SQIRSYVFHPYSMIKDHRTNYETGNVQGVMDGDLDPFIDAYLKSK 348
>gi|242372989|ref|ZP_04818563.1| peptide chain release factor 2 [Staphylococcus epidermidis
M23864:W1]
gi|242349315|gb|EES40916.1| peptide chain release factor 2 [Staphylococcus epidermidis
M23864:W1]
Length = 386
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 217/341 (63%), Gaps = 4/341 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L+ E + E E AD FWD++ +AQ+ + +K +N D +++D + T
Sbjct: 41 LENKETNIQEYEEMMADPGFWDDQNKAQDIIDKNNALKSIVNGYHDLANEVEDMSATREL 100
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
L EE D LEE KE +DQ+EL LL GP+D A++ + GAGGT++QD
Sbjct: 101 LQEEYDEDMKAELEEEVIQFKE---KMDQYELQLLLDGPHDANNAILELHPGAGGTESQD 157
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
WA MLLRMY R+GE++ +K V+ G+EAG+KS + ++G AYGYL EKG HR+VR
Sbjct: 158 WASMLLRMYQRYGEQKGFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVR 217
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF++ G R TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+R
Sbjct: 218 ISPFDSSGRRHTSFASCDVIPDFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIR 277
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITH PTG+ V ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG Q
Sbjct: 278 ITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQ 337
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
IR+YVFHPY +VKD RT ET + +VMDGE+EPFI++YL+
Sbjct: 338 IRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIEPFIEAYLR 378
>gi|403717145|ref|ZP_10942509.1| peptide chain release factor 2 [Kineosphaera limosa NBRC 100340]
gi|403209327|dbj|GAB97192.1| peptide chain release factor 2 [Kineosphaera limosa NBRC 100340]
Length = 369
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 158/369 (42%), Positives = 240/369 (65%), Gaps = 9/369 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF + KD+ +E +R L +L ++ +LE +AA WD++ AQ+ L
Sbjct: 4 DFASQIKDLRQT---MESVREVTDLPRLRAQIQDLESQAAAPDLWDDQERAQQVTSNLAR 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+++ +T +++D +V++ TEE DA L EA + L KA+ + E+ LL
Sbjct: 61 ANAELDRITGMDARVEDLEVLVEMGTEE---NDADTLAEAERELTSLRKAVGELEVRTLL 117
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
+G YD AV++I AGAGG DA D+A+ML+RMY+RW E+ Y TRV++ S EEAG+KSA
Sbjct: 118 AGEYDPREAVVTIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTRVMDTSYAEEAGLKSA 177
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
EV YAYG+L+ E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IP+ +
Sbjct: 178 TFEVNVPYAYGHLAVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDHIEIPDNE 236
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
L+I R+ G GGQ+VN ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL+
Sbjct: 237 LKIDVFRSSGPGGQSVNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLA 296
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
+ A+ K++ GD VKA WG Q+R+YV HPY++VKD+RT HE + V DG+++ FI
Sbjct: 297 KRAEEAAAKKELAGD-VKASWGDQMRSYVLHPYQMVKDLRTEHEVGNTSGVFDGDIDAFI 355
Query: 362 KSYLKYKYS 370
+S +++K S
Sbjct: 356 ESGIRWKLS 364
>gi|23465750|ref|NP_696353.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
gi|189439805|ref|YP_001954886.1| peptide chain release factor 2 [Bifidobacterium longum DJO10A]
gi|239622364|ref|ZP_04665395.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|296453666|ref|YP_003660809.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum JDM301]
gi|312133211|ref|YP_004000550.1| prfb [Bifidobacterium longum subsp. longum BBMN68]
gi|322690619|ref|YP_004220189.1| peptide chain release factor [Bifidobacterium longum subsp. longum
JCM 1217]
gi|384202009|ref|YP_005587756.1| peptide chain release factor [Bifidobacterium longum subsp. longum
KACC 91563]
gi|419848678|ref|ZP_14371771.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 1-6B]
gi|419851231|ref|ZP_14374183.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 35B]
gi|419852838|ref|ZP_14375691.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 2-2B]
gi|419854346|ref|ZP_14377134.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 44B]
gi|23326435|gb|AAN24989.1| peptide chain release factor 2 [Bifidobacterium longum NCC2705]
gi|189428240|gb|ACD98388.1| Protein chain release factor B [Bifidobacterium longum DJO10A]
gi|239514361|gb|EEQ54228.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291517272|emb|CBK70888.1| bacterial peptide chain release factor 2 (bRF-2) [Bifidobacterium
longum subsp. longum F8]
gi|296183097|gb|ADG99978.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum JDM301]
gi|311772412|gb|ADQ01900.1| PrfB [Bifidobacterium longum subsp. longum BBMN68]
gi|320455475|dbj|BAJ66097.1| peptide chain release factor [Bifidobacterium longum subsp. longum
JCM 1217]
gi|338755016|gb|AEI98005.1| peptide chain release factor [Bifidobacterium longum subsp. longum
KACC 91563]
gi|386406926|gb|EIJ21919.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 35B]
gi|386407211|gb|EIJ22191.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 1-6B]
gi|386409533|gb|EIJ24375.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 2-2B]
gi|386417686|gb|EIJ32158.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum 44B]
Length = 374
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 240/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L+ ++ +LE +AA WD+ AQ+ L+ +
Sbjct: 4 FDFTQAIGEARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAE 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L ++DD T+V+L E D+ L+EA S I E+ K LDQ E+ LL G
Sbjct: 64 SQLKRLNSASQRIDDVETLVELGHEEGDQDS--LDEAQSEIGEIQKDLDQMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|402299802|ref|ZP_10819375.1| peptide chain release factor 2 [Bacillus alcalophilus ATCC 27647]
gi|401725048|gb|EJS98362.1| peptide chain release factor 2 [Bacillus alcalophilus ATCC 27647]
Length = 328
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 211/325 (64%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
D FW+N+ AQ + +K+++N + + +D +L +E D D L E
Sbjct: 2 TDPDFWNNQERAQTVINESNALKEQVNTFLKLEGEYEDLEVSYELVKEEDDED--LAAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +K L + ++ FEL LLS PYDK A++ + GAGGT++QDWA MLLRMY RW + +
Sbjct: 60 FTGVKSLTEQMNAFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYNRWADSK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP L +++++++I EDL+I RA G GGQ++N ++AVRITH+PT V C ER
Sbjct: 180 CEVMPEL-DDTVEIEINTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ +KAKL + E++ E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNRDQAMKMMKAKLYQLRIEEQQRELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T HE+ + +VMDGEL+ FI +YL+
Sbjct: 299 TNHESGNTNAVMDGELDGFIDAYLR 323
>gi|269836751|ref|YP_003318979.1| hypothetical protein Sthe_0720 [Sphaerobacter thermophilus DSM
20745]
gi|269786014|gb|ACZ38157.1| conserved hypothetical protein [Sphaerobacter thermophilus DSM
20745]
Length = 369
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/372 (40%), Positives = 237/372 (63%), Gaps = 9/372 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
NL V +R++ I L ++E+ ELE ++AD FW++ A AQ ++ L +++
Sbjct: 5 NLEATVTGMLERLDRIGVRLDLPAKQREIEELEARSADPEFWNDGAGAQRVMRRLGALRN 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ T+ + D ++ L E D L +E A+ + + + ++Q EL LLSG Y
Sbjct: 65 QVETWTELHQQAADLRELIDLAE----ADDDLRDEIAAETERVLRGVEQLELNLLLSGQY 120
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A+++I AG GG DAQDWA+ML+RMY+RW + ++ +V++ + GEEAGIKSA IE+
Sbjct: 121 DEHDAIMAIHAGTGGVDAQDWAEMLMRMYLRWASNRGFQAQVLDVTEGEEAGIKSATIEI 180
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G YAYGY GE GTHR+VR SPF+ R T+F+ EV+P + EE ++ I ++++ I
Sbjct: 181 RGPYAYGYTKGEAGTHRLVRLSPFDQAHRRHTAFALVEVLPQV-EEDTEIVIRDDEIRID 239
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ+VNK ++AVRITH+PTG+ V C ERSQ+ N+ A+ L+A+L +A +
Sbjct: 240 TYRSSGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQIQNRETAMKILRARLTELAIRK 299
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
R E +++G+ V WG +IR+YV PY +V D RT + TS++ +V +GE++PFI++YL
Sbjct: 300 REEEQAKLKGEHVAVGWGNRIRSYVLQPYTMVTDHRTEYSTSNVQAVFEGEIDPFIEAYL 359
Query: 366 KYKYSMSLSASD 377
+ L A+D
Sbjct: 360 HQQ----LGAAD 367
>gi|357058420|ref|ZP_09119274.1| peptide chain release factor 2 [Selenomonas infelix ATCC 43532]
gi|355374273|gb|EHG21574.1| peptide chain release factor 2 [Selenomonas infelix ATCC 43532]
Length = 368
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 235/364 (64%), Gaps = 5/364 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ SFWD+ AQ+ Q L +K
Sbjct: 4 DLKPILNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAVAAQKLNQELAALKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ D K +DA T+ ++ EE D + G + +I E L+ L LLSG
Sbjct: 64 GVDTYRDLMAKYEDAETLYEMGIEESDPSMEGDIRAELDLIAE---GLETLRLEVLLSGE 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++++ AGAGGT+AQDW MLLRMY RW E+ + + GEEAG+KSA +
Sbjct: 121 YDANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGEEAGVKSATLF 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 181 IKGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRV 239
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E
Sbjct: 240 DYFRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQE 299
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDG+++PFI++Y
Sbjct: 300 KKEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAY 359
Query: 365 LKYK 368
L K
Sbjct: 360 LNAK 363
>gi|169335448|ref|ZP_02862641.1| hypothetical protein ANASTE_01862 [Anaerofustis stercorihominis DSM
17244]
gi|169258186|gb|EDS72152.1| peptide chain release factor 2 [Anaerofustis stercorihominis DSM
17244]
Length = 364
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 232/366 (63%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + L+ ++ + +I S ++ L+ EL + E D SFW+ +A + L+ +
Sbjct: 1 MAELIELKNLLDDIDKELSDIAGSINIKSLKDELVKKETLMNDESFWNENDKANKILKEV 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K +IN + + K DD +V++ +E S + + A + EL K L F + L
Sbjct: 61 KSLKSQINSYSSLEYKKDDISVLVEMLQEDFSQNEA--DSAMEELLELEKELKVFTIDTL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD A++SI GAGGT++QDWA+MLLRM++R+ EK+++K +++E+ G+ AGIKS
Sbjct: 119 LSGEYDSNNAILSIHPGAGGTESQDWAEMLLRMFIRFAEKRKFKIKILEQLPGDIAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ + G AYGYL GEKG HR+VR SPF++ R TSF+ +V P + E+ ++++I
Sbjct: 179 VTLLISGDNAYGYLKGEKGVHRLVRISPFDSNSRRHTSFASVDVEPEIKED-INLEINPS 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+I RAGG GGQ+VNK ++AVRITH+PT + V C ERSQ NK A+ LK KL
Sbjct: 238 DLKIDTYRAGGAGGQHVNKTDSAVRITHLPTKIVVSCQNERSQFQNKETAMKILKGKLYK 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I E+ +I +I+GD + WG QIR+YVFHPY +VKD RT ETS++ SVMDG++ F
Sbjct: 298 ILMEEHKEKIDEIKGDYGQIAWGNQIRSYVFHPYSMVKDHRTKTETSNVQSVMDGDINIF 357
Query: 361 IKSYLK 366
I ++LK
Sbjct: 358 IDAFLK 363
>gi|288905693|ref|YP_003430915.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
gi|306831789|ref|ZP_07464945.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325978722|ref|YP_004288438.1| peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|386338143|ref|YP_006034312.1| peptide chain release factor 2 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732419|emb|CBI13991.1| peptide chain release factor 2 [Streptococcus gallolyticus UCN34]
gi|304425987|gb|EFM29103.1| peptide chain release factor RF2 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178650|emb|CBZ48694.1| Peptide chain release factor 1 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334280779|dbj|BAK28353.1| peptide chain release factor 2 [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
Length = 336
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 222/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS A L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQDWADM
Sbjct: 61 DDSVQAELEES----LEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + +K ++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSFS EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFSSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG+++ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAYLKWR 334
>gi|306823395|ref|ZP_07456770.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
27679]
gi|309802644|ref|ZP_07696748.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
gi|304553102|gb|EFM41014.1| peptide chain release factor RF2 [Bifidobacterium dentium ATCC
27679]
gi|308220708|gb|EFO77016.1| peptide chain release factor 2 [Bifidobacterium dentium JCVIHMP022]
Length = 380
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 240/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L + ELE++A + WD+ AQ+ L+ V+
Sbjct: 8 FDYSQAIGEARAKYESISKALDVDRLTVQAKELEVQATEPGLWDDPENAQKITSKLSAVQ 67
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L ++DD T+V+L E + DA LEEA + I+ + LD E+ LL G
Sbjct: 68 SQLKRLASASQRIDDVETLVELGREEE--DADTLEEAKNEIEGIRHDLDDMEIQTLLDGE 125
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+RW E+ YK +V++ S EEAGIKSA +
Sbjct: 126 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATFQ 185
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG +S E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + +P+ ++ +
Sbjct: 186 VDAPYAYGRMSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDVPDSEIRV 244
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITHIPTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 245 DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 304
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG+++ FI++
Sbjct: 305 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDAFIEAG 363
Query: 365 LKYKY 369
+++++
Sbjct: 364 IRWRH 368
>gi|373457567|ref|ZP_09549334.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
gi|371719231|gb|EHO41002.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
Length = 367
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 230/355 (64%), Gaps = 3/355 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E RV+E+R + +++ LE K + FW+++ +AQ+ L+ + K+ ++
Sbjct: 9 LEELEQRVKELRGYLDIDNRTEQIKRLEEKTGEDGFWNDQEKAQKVLKQINRHKEWVDAW 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+++A ++++ E D ++A L +E S K++ K ++ E ++LSG D + A
Sbjct: 69 QSVNNLLEEAKILIEMLAE-DESEA-LKDELVSHFKKMEKEINALEFKRMLSGRDDPKNA 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
+++I GAGGT++QDWA ML+RMY+R+ E+Q ++T +++ GEEAGIKS IEV+G YA
Sbjct: 127 ILTIHPGAGGTESQDWASMLMRMYLRFAERQGFETEIMDYQPGEEAGIKSVTIEVKGNYA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL E G HR+VR SPF+A R TSF+ V+P + +E++DV+I DL I RA
Sbjct: 187 YGYLKAENGVHRLVRISPFDANKRRHTSFASVFVIPEI-DENIDVEINPSDLRIDTYRAS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VNK ++A+RITH+PTG+ V+C ERSQ NK AL L A+L + E++ ++
Sbjct: 246 GAGGQHVNKTDSAIRITHLPTGIVVQCQNERSQHKNKANALKILAARLYQLKLEEQLAKK 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
K+ WG QIR+YVFHPY +VKD RT +ETS++ VMDG++ PFI+ YL
Sbjct: 306 KEYEESKRDIAWGSQIRSYVFHPYNMVKDHRTNYETSNVQQVMDGDIYPFIEKYL 360
>gi|443627028|ref|ZP_21111430.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
gi|443339445|gb|ELS53685.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
Length = 368
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/363 (42%), Positives = 237/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ ++++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRSRIDDLAVLFEMAEEEDDPDTRA--EAESELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAERLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E+S V+I E DL I
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDESDLRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVRITH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEFEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|322688633|ref|YP_004208367.1| peptide chain release factor [Bifidobacterium longum subsp.
infantis 157F]
gi|320459969|dbj|BAJ70589.1| peptide chain release factor [Bifidobacterium longum subsp.
infantis 157F]
Length = 374
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 240/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L+ ++ +LE +AA WD+ AQ+ L+ +
Sbjct: 4 FDFTQAIGEARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAE 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L ++DD T+V+L E D+ L+EA S I E+ K LDQ E+ LL G
Sbjct: 64 SQLKRLNSASQRIDDVETLVELGREEGDQDS--LDEAQSEIGEIQKDLDQMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|67461211|sp|Q8Y4D8.2|RF2_LISMO RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 366
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 227/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L EE IK + FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQEELEKDIKAYMATISAFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L + +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DGDIEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 362
>gi|334127093|ref|ZP_08501023.1| peptide chain release factor RF2 [Centipeda periodontii DSM 2778]
gi|333390055|gb|EGK61207.1| peptide chain release factor RF2 [Centipeda periodontii DSM 2778]
Length = 368
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 237/364 (65%), Gaps = 5/364 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ SFWD+ A AQ+ Q L +K
Sbjct: 4 DLKPILNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPSFWDDAAAAQKLNQELAALKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ D K +DA T+ ++ EE D + + ++I E L+ +L LLSG
Sbjct: 64 GVDTYRDLMAKYEDAETLYEMGIEESDPSMEADIRAELTLIAE---GLETLQLEVLLSGE 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA +
Sbjct: 121 YDANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVDTADLQPGDEAGVKSATLF 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 181 IKGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRV 239
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E
Sbjct: 240 DYFRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQE 299
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDG+++PFI++Y
Sbjct: 300 KKEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGDIDPFIRAY 359
Query: 365 LKYK 368
L K
Sbjct: 360 LNAK 363
>gi|300741817|ref|ZP_07071838.1| peptide chain release factor 2 [Rothia dentocariosa M567]
gi|300381002|gb|EFJ77564.1| peptide chain release factor 2 [Rothia dentocariosa M567]
Length = 375
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 239/351 (68%), Gaps = 3/351 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + L+ ++ L +L +A+ WD+ AQ AL+ + ++N LT+ +++DD
Sbjct: 20 IVAVSDLEGIKCALEDLSQQASAPELWDDPEHAQRVTSALSHKQAELNRLTNLASRIDDV 79
Query: 81 VTIVKLTEEMD-STDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+V+L + D S+ LL EA + KEL K LD+ E+ LLSG YD+ AV++I +GAG
Sbjct: 80 EVMVELAQTEDESSKEDLLAEAEAECKELRKKLDELEVLVLLSGEYDQREAVVTIRSGAG 139
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
G DA D+A+MLLRMY+RW EK Y T+V++ S EEAG+KS EV YA+G LS E G
Sbjct: 140 GVDAADFAEMLLRMYLRWAEKNGYPTKVLDTSYAEEAGLKSVTFEVNAPYAFGRLSVEAG 199
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 259
THR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IPE ++++ R+ G GGQ+VN
Sbjct: 200 THRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDALEIPESEIKVDVFRSSGPGGQSVNT 258
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ +EQ ++ K++ GD +K
Sbjct: 259 TDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLMLRQEQEDAKKKELAGD-IK 317
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
A WG Q+R+YV HPY++VKD+RTG+E + SV+DG L FI+ ++++ S
Sbjct: 318 ASWGDQMRSYVLHPYQMVKDLRTGYEEGNTSSVLDGGLNRFIEEGIRWRAS 368
>gi|347750934|ref|YP_004858499.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
gi|347583452|gb|AEO99718.1| peptide chain release factor 2 [Bacillus coagulans 36D1]
Length = 327
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/324 (44%), Positives = 217/324 (66%), Gaps = 3/324 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD++ EAQ+ + +K+ +N + +++ +D +L +E D+ L EE
Sbjct: 3 EPNFWDDQQEAQKIINESNALKEMVNGYRELESQQEDLEVTHELAKE--ENDSELKEELE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+ ++ + L+++EL LL+GPYD A++ + GAGGT++QDW MLLRMY RWGEK+
Sbjct: 61 AELEAFTEKLNEYELQLLLNGPYDANNAILELHPGAGGTESQDWCSMLLRMYTRWGEKKG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+K ++ G+EAG+KS + +G AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 121 FKVETLDYLPGDEAGVKSVTLLFKGHNAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSC 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EVMP + +++++V++ EDL + RA G GGQ++NK +AVRITHIPTG+ V C ERS
Sbjct: 181 EVMPEI-DDNIEVEVRPEDLRVDTYRASGAGGQHINKTSSAVRITHIPTGIVVSCQSERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q+ N+ +A+ LKAKL E++ ++ +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 240 QIQNREQAMKMLKAKLYQKEVEEKEKQLAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
ET ++ +VMDGE++PFI +YL+
Sbjct: 300 NVETGNVQAVMDGEIDPFIDAYLR 323
>gi|304437837|ref|ZP_07397786.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369194|gb|EFM22870.1| peptide chain release factor RF2 [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 368
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 237/363 (65%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K + SFWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMGEPSFWDDAAAAQKLNQELAALKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ DA + ++ + + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKGLMAKYEDAETLYEMG--IEEGDASMEDDIRAELDLIAEGLETLQLEVLLSGDY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + +
Sbjct: 122 DANDAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSATLFI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 182 KGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVPINMDDVRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + + L+AKL + +E+
Sbjct: 241 YYRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCMKMLRAKLFELEQEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ EI ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGEL+PFI++YL
Sbjct: 301 KEEEIAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGELDPFIRAYL 360
Query: 366 KYK 368
K
Sbjct: 361 NAK 363
>gi|197294594|ref|YP_001799135.1| Protein chain release factor B [Candidatus Phytoplasma
australiense]
gi|171853921|emb|CAM11884.1| Protein chain release factor B [Candidatus Phytoplasma
australiense]
Length = 370
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 220/362 (60%), Gaps = 6/362 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y + + +E + + +++ + L Q + L ++ FWD+ +A T Q D++
Sbjct: 4 YEINQHLENIAQNLRDLKEAINLSQSYQTLNQINELMQKKDFWDDPKKAVATSQKFNDLQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+KIN L +T D VT + L ++ A L EE IK+L A+ F++ L+ P
Sbjct: 64 EKINTLKHLETNHQDLVTFLDLESNQNNETAFLEEE----IKKLIDAVLNFKIKVFLNQP 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++ GAGGT++QDW +ML RMY ++ +K+ +KT +++ GEEAGIKSA +
Sbjct: 120 YDNNNAILIFHPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQSGEEAGIKSATLL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+G YAYGYL EKG HR+VR SPF+ R TSF +V+P + +E + + + +EDL+
Sbjct: 180 VKGAYAYGYLKAEKGVHRLVRVSPFDTNAKRHTSFVSCDVLPEI-KEKIKIDLRQEDLKF 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE- 303
F R+ G GGQ+VN ++AVRITH+PTG+ V C ERSQ N+ KAL LK KL +A+
Sbjct: 239 DFFRSSGAGGQHVNTTDSAVRITHLPTGLVVSCQNERSQNQNREKALQMLKIKLFQLADK 298
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+Q+ K +G+ + WG QIR+YVFHPYK+VKD RT E + VMDG ++ FI
Sbjct: 299 KQKEEHAKNFQGEQKEIGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDVFING 358
Query: 364 YL 365
YL
Sbjct: 359 YL 360
>gi|403667837|ref|ZP_10933137.1| peptide chain release factor 2 [Kurthia sp. JC8E]
Length = 327
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 206/327 (62%), Gaps = 5/327 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEEA 101
D SFW+++ +AQ + +KD +N T+ +D +T L EEMD LL +
Sbjct: 3 DPSFWNDQQKAQTLINESKALKDTVNEFYSLATEQEDLEMTHDLLKEEMDE---ALLVDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K +D FEL LLS PYD+ A++ + GAGGT++QDW MLLRMY RW EK
Sbjct: 60 DESMKAYQARIDTFELQLLLSEPYDQNNAILELHPGAGGTESQDWGTMLLRMYTRWAEKH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAG+KS + V G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 DFKVETLDYLPGDEAGLKSVTLAVRGHNAYGYLKAEKGVHRLVRISPFDSAGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP +E + V I EDL+I RA G GGQ++NK E+AVRITH+PT V C ER
Sbjct: 180 CDVMPEFSDEVV-VDIRTEDLKIDTYRASGAGGQHINKTESAVRITHLPTNTVVSCQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ KA+S L+AKL + E++ + +IRG+ + W QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRAKAMSMLQAKLYQLKLEEKQEHLDEIRGEQKEIGWSSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET ++ +VMDG+L+ FI +YL+ K
Sbjct: 299 TNVETGNVQAVMDGDLDDFINAYLRMK 325
>gi|307723715|ref|YP_003903466.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
gi|307580776|gb|ADN54175.1| hypothetical protein Thet_0528 [Thermoanaerobacter sp. X513]
Length = 368
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 240/368 (65%), Gaps = 6/368 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+QD+ + +V + ++E+ S ++ +++E+ E++ K +D +FW + ++QE +
Sbjct: 2 LQDY---KAEVSNMIEEIKEMGVSLDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQ 58
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ + +K +D T+++L ++ D + +E KEL K L+ ++ L
Sbjct: 59 KALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+G YDK A++SI AG+GGT+AQDWA+MLLRMY RW + ++ ++ GEEAGIKS
Sbjct: 117 LNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+ ++G +AYGYL E G HR+VR SPF+A G R TSF+ EV+P L E ++V+I E
Sbjct: 177 VTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPE 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+I RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL
Sbjct: 236 DLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLD 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ +++ +I+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ F
Sbjct: 296 LMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGF 355
Query: 361 IKSYLKYK 368
I +YLK K
Sbjct: 356 INAYLKQK 363
>gi|414153363|ref|ZP_11409690.1| Peptide chain release factor 2 [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411455745|emb|CCO07593.1| Peptide chain release factor 2 [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 328
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 216/323 (66%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +++ Q L +KD++ ++ + D +++L +E D L EE + +
Sbjct: 6 FWDDLEHSRQLNQQLAGLKDRVARFASLESALQDLEVMLELCQE--EQDPLLEEELTAGL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++L + L EL LL+GPYD+ A++S+ GAGGT++QDWA MLLRMY R+ E YK
Sbjct: 64 EDLARRLADTELEVLLAGPYDRNDAILSLHPGAGGTESQDWAQMLLRMYTRYCENHNYKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKSA I+V G AYGYL EKG HR+VR SPF+A G R TSF+ +V+
Sbjct: 124 EVLDLLPGDEAGIKSATIQVAGPNAYGYLKCEKGVHRLVRISPFDAAGRRHTSFASVDVL 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P++ EE ++VQI EDL+I R+GG GGQ+VNK ++AVRITH+PTG+ V C ERSQ
Sbjct: 184 PVV-EEEVEVQIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQTY 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N++ A+ LKAKL+ + ++ E+ +RG+ WG QIR+YVFHPY LVKD RTG E
Sbjct: 243 NRMAAMKLLKAKLIDLELRKKEEELAALRGEQKDIAWGNQIRSYVFHPYSLVKDHRTGVE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
T ++ +VMDG +E FI + LK K
Sbjct: 303 TGNVQAVMDGRIEEFIAACLKQK 325
>gi|406575508|ref|ZP_11051211.1| peptide chain release factor 2 [Janibacter hoylei PVAS-1]
gi|404555081|gb|EKA60580.1| peptide chain release factor 2 [Janibacter hoylei PVAS-1]
Length = 390
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 233/348 (66%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + LE ++A+LE +AA WD+ +AQ AL+ ++ + ++DD
Sbjct: 19 VREVTDVPALEAQIADLEQQAAAPDLWDDPDKAQGVTSALSRANAELERVHSMDARIDDL 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L +E DA L EA + ++ A+ Q E+ LLSG YD+ AV++I AGAGG
Sbjct: 79 EALVELGQE--EGDAETLTEAEGELAKITTAVGQLEVRTLLSGEYDEREAVVTIRAGAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ML+RMY+RW E+ Y T+V++ S EEAG+KSA EV YAYG LS E GT
Sbjct: 137 VDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVNVPYAYGNLSVEGGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IP+ +L+I R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAAVEVIPLI-EGTDSIEIPDNELKIDVFRSSGPGGQSVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG+ V E+SQ+ N+ AL ++++LL+ + + A+E K++ GD VKA
Sbjct: 256 DSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVMQSRLLLQKKAEEAAERKELAGD-VKA 314
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV +PY++VKD+RT HET + +V DG+++ FI++ ++++
Sbjct: 315 SWGDQMRSYVLNPYQMVKDLRTEHETGNPSAVFDGDIDGFIEAGIRWR 362
>gi|383764407|ref|YP_005443389.1| peptide chain release factor 2 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381384675|dbj|BAM01492.1| peptide chain release factor 2 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 350
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/333 (46%), Positives = 222/333 (66%), Gaps = 5/333 (1%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ ELE ++ FWD+ AQ+ +Q L+ ++DK+ + + DA+ + ++ E+
Sbjct: 16 IQELEQRSQQPGFWDDPQSAQKIMQELSALRDKVEVWEGLARRAHDALELYQMAED---- 71
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D LL E + + L LD+ E T LSGPYD A++SI AGAGGT+AQDWA MLLRM
Sbjct: 72 DPALLTELEAEAEALEAELDEREFTLALSGPYDSGSAILSIHAGAGGTEAQDWAQMLLRM 131
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y+RW EK +KT + +++ GEEAGIKS +EV G AYG L EKG HR+VR SPF+A
Sbjct: 132 YLRWAEKHGFKTFITDETEGEEAGIKSVTVEVNGPNAYGLLKAEKGVHRLVRLSPFDANN 191
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF+ EVMP+L +E +++QI +D+E+ + G GGQNV K +TAVRI H+PTG+
Sbjct: 192 RRHTSFAKVEVMPVL-DEDIEIQIDPKDIEVEVFLSSGAGGQNVQKNQTAVRIRHLPTGI 250
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V ERSQ N+ A+ L+ KL + +E+ A+E +++G A +G QIR+YV HP
Sbjct: 251 VVTSQNERSQTQNREMAMRVLRGKLYELEQERLAAEKAKLKGKVEDANFGSQIRSYVLHP 310
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y+LVKD+RTG ETS+ +V+DGE++PFI+++LK
Sbjct: 311 YQLVKDLRTGVETSNTTAVLDGEIDPFIEAWLK 343
>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
Length = 372
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 219/341 (64%), Gaps = 4/341 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L + K+L EL +AA W+++ AQ+ L+ ++ ++N + +++D + +L
Sbjct: 26 LDAIRKQLEELGEQAAAPDLWNDQEHAQKVTSKLSYLQGEVNRVESLGQRLEDLTVLYEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
D D EEA + L + E+ LLSG YD AV++I + AGG DA DW
Sbjct: 86 AAAED--DEETREEADRELASLKSDIGALEVRTLLSGEYDAREAVVTINSQAGGVDAADW 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMY+RW E++ Y T V E S EEAGIKSA V+ YAYG L GE GTHR+VR
Sbjct: 144 AQMLLRMYIRWAERKGYPTEVYETSYAEEAGIKSATFTVKAPYAYGTLRGEHGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+G +V+P++ E + + I E+DL + R+ G GGQ VN ++AVR+
Sbjct: 204 SPFDNQGRRQTSFAGVDVVPVV-ETTDHIDINEDDLRVDVYRSSGPGGQGVNTTDSAVRL 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V C ERSQL NK A++ L++KLL ++ A+ + +IRG+A + WG QI
Sbjct: 263 THLPTGIVVSCQNERSQLQNKATAMAVLQSKLLERKRQEEAAALNEIRGEATTS-WGTQI 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
RNYV HPY++VKD+RTG E + SV+DG+L+ FI+S +++
Sbjct: 322 RNYVLHPYQIVKDLRTGTEAGNPSSVLDGDLDEFIESEIRW 362
>gi|291547275|emb|CBL20383.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus sp.
SR1/5]
Length = 332
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 210/329 (63%), Gaps = 5/329 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWDN +Q ++ L +KD I + +T+M+D T++++ E D ++
Sbjct: 1 MEAPD--FWDNAEASQMKMKQLKSLKDDIETYHNLETQMEDMETMIEMGYE--ENDPEIV 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ E + D + LLSG YD E A+I + AGAGGT+A DW ML RMY RW
Sbjct: 57 PEIQEMLDEFQASFDSIRVKTLLSGEYDGENAIIKLNAGAGGTEACDWCGMLYRMYSRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ + V++ G+EAG+KS +V G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 EKKGFALEVLDYLDGDEAGVKSVTFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + ++ +DV+I ++D+ I R+ G GGQ++NK +A+RITH PTG+ V+C
Sbjct: 177 FVSCDVMPDIKKD-LDVEINDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPTGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +++ ++ IRG+ WG QIR+YV PY +VK
Sbjct: 236 NERSQHMNKDKAMQMLKAKLYLLKQQEAEEKLSGIRGEVTDIGWGNQIRSYVLQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RT ET ++ +V+DG ++ FI +YLK+
Sbjct: 296 DHRTNEETGNVDAVLDGGIDIFINAYLKW 324
>gi|421892749|ref|ZP_16323358.1| Peptide chain release factor 2; programmed frameshift-containing
[Streptococcus pyogenes NS88.2]
gi|379981496|emb|CCG27080.1| Peptide chain release factor 2; programmed frameshift-containing
[Streptococcus pyogenes NS88.2]
Length = 337
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 221/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE D FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTDPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
>gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
gi|259585260|sp|C5BYB6.1|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
Length = 374
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/351 (42%), Positives = 233/351 (66%), Gaps = 4/351 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E+I A L +AEL AA WD+ AQ+ L+ + ++ L ++++
Sbjct: 16 LEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTLRSRI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD T+V+L E D DA L EA + + ++ ++ + E+ LL+G YD AV++I +G
Sbjct: 76 DDLETLVQLAAEED--DADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIRSG 133
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+MLLRMY+RW E++ Y T+V++ S EEAG+KSA EV+ YA+G LS E
Sbjct: 134 AGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLSVE 193
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IPE D+ I R+ G GGQ+V
Sbjct: 194 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDHIDIPETDIRIDVFRSSGPGGQSV 252
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVRITH+PTG+ V E+SQ+ N+ A+ L+++LL+ +E+ ++ K++ GD
Sbjct: 253 NTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLAMQEEENAKKKELAGD- 311
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VKA WG Q+R+YV PY++VKD+RT HE + +V DG+++ FI++ ++++
Sbjct: 312 VKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWR 362
>gi|406659286|ref|ZP_11067424.1| peptide chain release factor RF2 [Streptococcus iniae 9117]
gi|405577395|gb|EKB51543.1| peptide chain release factor RF2 [Streptococcus iniae 9117]
Length = 338
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 220/339 (64%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FW++ AQ+T Q L D+K N +M D +L E
Sbjct: 1 MEEEIALLEHQMTEPDFWNDNIAAQKTSQELNDLKVTYNTFH----QMQDLSEETELYLE 56
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
M D + EE + +++L++ L +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 57 MLDEDESVKEELEASLEKLDQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + YK ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LFRMYSRFGNAKGYKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V I ++++++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVDIRDDEIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E S + VMDG+++ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFEVSQVDKVMDGDIDGFIDAYLKWR 334
>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
gi|384044357|ref|YP_005492374.1| protein chain release factor B-like protein [Bacillus megaterium
WSH-002]
gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
gi|345442048|gb|AEN87065.1| Protein chain release factor B-like protein [Bacillus megaterium
WSH-002]
Length = 326
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 205/325 (63%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+++ AQ + +KD +N ++ +L +E D L EE
Sbjct: 2 ADPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKE--EYDEDLAEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +KEL ++ FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 VSELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
++MP +E + + I EDL++ RA G GGQ++N ++AVRITH+PT V V C ER
Sbjct: 180 CDIMPEFNDE-ISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL + E++ ++ +IRG+ WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E + SVMDG+L+PFI +YL+
Sbjct: 299 TNTEVGNTQSVMDGDLDPFIDAYLR 323
>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
Length = 378
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 227/367 (61%), Gaps = 3/367 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ ++ +E + AS L+ K + EL+ + FW + A
Sbjct: 1 MIEFDQFKYELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTEN 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+++ K DD ++++ ++ D ++ E ++ E ++ LD L
Sbjct: 61 HHLKNELESYQSLKQSYDDIGALIEMG--VEEGDESVIPEIRELLSEFSEKLDSMSTQLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD A++ + AGAGGT+A DWA ML RMY RW E++ + ++++ GEEAGIKS
Sbjct: 119 LSGEYDAMNAILRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+E++G YAYGYL E G HR+VR SPFNA+G RQTSF +VMP + E +DV I EE
Sbjct: 179 VTMEIDGDYAYGYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDI-ETDIDVDIREE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+++ R+ G GGQ++NK +AVR+ HIPTG V C EERSQL N+ KA+ LKAKL +
Sbjct: 238 DIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYI 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+E++ +++ IRG+ WG QIR+YV PY++VKD+RTG ET + +V+DG+++ F
Sbjct: 298 KEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRF 357
Query: 361 IKSYLKY 367
I +YLK+
Sbjct: 358 ITAYLKW 364
>gi|421858651|ref|ZP_16290915.1| protein chain release factor B [Paenibacillus popilliae ATCC 14706]
gi|410831824|dbj|GAC41352.1| protein chain release factor B [Paenibacillus popilliae ATCC 14706]
Length = 340
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 218/333 (65%), Gaps = 3/333 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+A E K + FWD+ AQ + L +K + + + +D +++L +E
Sbjct: 2 IANYEEKMSAPDFWDDNERAQGMISELNAIKGIVEEYSSLQQDYEDTQMMLELADE--EH 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D GL +E +K+L ++QFEL LLS PYDK A++ + GAGGT++QDW MLLRM
Sbjct: 60 DEGLAQELGEGVKQLYGRVEQFELQLLLSEPYDKMNAILELHPGAGGTESQDWGQMLLRM 119
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E++ +K V++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G
Sbjct: 120 YTRWAEQRGFKVEVLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSG 179
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF +V+P + ++ +D+++ EDL+I RA G GGQ++N ++AVRITHIPTG+
Sbjct: 180 RRHTSFVSCDVVPEITDD-VDIEVRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGI 238
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ +A++ L++KL E++ ++ +IRGD + WG QIR+YVFHP
Sbjct: 239 VVTCQTERSQIKNRERAMTLLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHP 298
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y +VKD RT ET ++ +VMDG+++ FI++YL+
Sbjct: 299 YSMVKDHRTQVETGNVGAVMDGDIDEFIEAYLR 331
>gi|385260629|ref|ZP_10038772.1| peptide chain release factor 2 [Streptococcus sp. SK140]
gi|385190872|gb|EIF38300.1| peptide chain release factor 2 [Streptococcus sp. SK140]
Length = 329
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 147/334 (44%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + DDA ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDDAEILLDFLAEDESVKDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ A EL++ + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEKLA----ELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 177 TSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDALKGDKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|374340372|ref|YP_005097108.1| peptide chain release factor 2 [Marinitoga piezophila KA3]
gi|372101906|gb|AEX85810.1| peptide chain release factor 2 [Marinitoga piezophila KA3]
Length = 368
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 223/363 (61%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y ++ ++ ++ E ++ +++ ++ELE K D FW+++ +A++ + L +K
Sbjct: 4 YEVKVKIDELKEKFENLKNLFNIEKTTARISELENKMTDPDFWNDQKKAEKISRELQHLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ + + DD ++ EE D + E+A I+ E+ K + FEL LLSG
Sbjct: 64 HEMEEFNNLSSLFDDLAVAIEFGEE----DPSMKEQAMEILGEIEKKVKDFELAMLLSGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD ++I GAGGT++QDWADMLLRMY RW EK YK +++ G+EAGIKS ++
Sbjct: 120 YDSNNVYLTIHPGAGGTESQDWADMLLRMYTRWAEKNNYKLEIIDYLPGDEAGIKSVTVK 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+ G +AYG L E G HR+VR SPF+A R TSF+ V P + EE P +DL+I
Sbjct: 180 ISGPFAYGKLKYESGVHRLVRVSPFDAANRRHTSFASVSVTPEIDEEIDIEIRP-DDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RAGG GGQ+VNK ++AVRITH+PTG+ V C ERSQ NK A+ LKA+L + +
Sbjct: 239 DTYRAGGAGGQHVNKTDSAVRITHLPTGIVVACQNERSQHQNKATAMQILKARLYELEMQ 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ E ++ GD WG QIR+YV +PYK+VKD RT +ETS+ +V+DGEL+ FI++
Sbjct: 299 KKMEEKMKLMGDVKDISWGNQIRSYVLYPYKMVKDHRTNYETSNSDAVLDGELDGFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LLY 361
>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
Length = 368
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 237/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLAVLFEMAEEEDDPDTRA--EAESELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT + E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT HE + SV +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|350267767|ref|YP_004879074.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349600654|gb|AEP88442.1| peptide chain release factor 2 [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 327
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/331 (44%), Positives = 217/331 (65%), Gaps = 7/331 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D+ L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGIKDYVN---SYK-KLNESHEELQMTHDLLKEEPDSDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RWGE
Sbjct: 58 ELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 118 RRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C
Sbjct: 178 VSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD
Sbjct: 237 ERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 297 HRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|289706413|ref|ZP_06502771.1| peptide chain release factor 2 [Micrococcus luteus SK58]
gi|289556908|gb|EFD50241.1| peptide chain release factor 2 [Micrococcus luteus SK58]
Length = 373
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 236/348 (67%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I + L +++ ++AELE +A+ WD+ EAQ+ L+ + + +T +++++D
Sbjct: 20 IEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSLESRIEDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
T+V+L E D + LLE+A + + KAL++ E+ LLSG YD+ AV++I AGAGG
Sbjct: 80 ETMVELAAEED--EPSLLEDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIRAGAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ L+RMY+RW E++ + T+V++ S EEAG+KS EV +A+G LS E GT
Sbjct: 138 VDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLSVEAGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E ++IPE ++++ R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVVPLI-ESDDSIEIPESEIKVDVFRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+TH+PTG+ V E+SQ+ N+ AL L+++LL++ + + ++ K++ GD VKA
Sbjct: 257 DSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDAKKKEMAGD-VKA 315
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV +PY++VKD+RTGHE + SV DG ++ F+ + ++++
Sbjct: 316 SWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363
>gi|377574295|ref|ZP_09803326.1| peptide chain release factor 2 [Mobilicoccus pelagius NBRC 104925]
gi|377537098|dbj|GAB48491.1| peptide chain release factor 2 [Mobilicoccus pelagius NBRC 104925]
Length = 356
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 232/353 (65%), Gaps = 3/353 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E +R + L L + +LE ++ WD++ AQ +L+ ++ + +++
Sbjct: 1 MESVRQVSDLDALRARITDLEKQSVAPDLWDDQENAQHVTSSLSRANAELERIEGMDSRI 60
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +V++ E D DA L EA + + + KA+ + E+ LLSG YD+ AV++I AG
Sbjct: 61 DDLEALVEMGTE-DGGDAETLAEAETELAAVKKAVGELEVRTLLSGEYDQREAVVTIRAG 119
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+MLLRMY+RW E+ Y T+V++ S EEAGIKSA E+ YAYG +S E
Sbjct: 120 AGGVDAADFAEMLLRMYLRWAERHEYPTKVMDTSYAEEAGIKSATFEINVPYAYGNMSVE 179
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IPE +L+I R+ G GGQ+V
Sbjct: 180 AGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDHIDIPENELKIDVFRSSGPGGQSV 238
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG V E+SQ+ N+ AL ++++LL++ + A+ K++ GD
Sbjct: 239 NTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKRAEEAALNKELAGD- 297
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKA WG Q+R+YV HPY++VKD+RT +E + +V DG+++ F+++ +++K S
Sbjct: 298 VKASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSAVFDGDIDGFMEAGIRWKLS 350
>gi|332654908|ref|ZP_08420650.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
gi|332516251|gb|EGJ45859.1| peptide chain release factor 2 [Ruminococcaceae bacterium D16]
Length = 373
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 225/348 (64%), Gaps = 3/348 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E++ + L+ E+EL L+ ++A FW+N +AQ+ Q + ++ K++ K
Sbjct: 18 LEKLGQALDLESAERELDMLQAESAADGFWNNLEKAQKVQQRIKTLQTKVDKHHKRKQHW 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD + + ++ E + D L+ E L + +++ L LL+G YD +++I G
Sbjct: 78 DDLMALCEMGNEFE--DESLVPELEEGYAALEEEMEEARLQTLLTGEYDSSNVILTIHPG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDWA ML RMY RW E+ + ++++ G+EAGIKSA I +EG AYGYL GE
Sbjct: 136 AGGTEAQDWAQMLYRMYTRWTERHGFTYQIMDYQDGDEAGIKSATIMIEGENAYGYLRGE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPF+A RQTSF+ EVMP LPE+ ++V+I ED+E+ RA G GGQ+V
Sbjct: 196 HGVHRLVRVSPFDANARRQTSFASVEVMPDLPED-VEVEIRPEDIEMQVYRASGAGGQHV 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVR+ H PTG+ V +ERSQ NK + L+AKL+ + +++A +I ++G
Sbjct: 255 NKTSSAVRLIHKPTGIVVASQQERSQFQNKDNCMKMLRAKLVELQMQEKAEKISDLKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+K EWG QIR+YVF PY+LVKD RT +ETS+I +VMDGEL+ FI +YL
Sbjct: 315 LKIEWGSQIRSYVFMPYQLVKDNRTAYETSNIGAVMDGELDGFINAYL 362
>gi|386830396|ref|YP_006237050.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|385195788|emb|CCG15397.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 369
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/361 (40%), Positives = 227/361 (62%), Gaps = 4/361 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+N + ++DD T L EE D LE+ K +D++EL LL GP+
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEVIYFK---AKVDEYELQLLLDGPH 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + +
Sbjct: 123 DANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 183 KGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVD 242
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E+
Sbjct: 243 TFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEE 302
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL
Sbjct: 303 QAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYL 362
Query: 366 K 366
+
Sbjct: 363 R 363
>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 [Geobacillus kaustophilus HTA426]
gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
kaustophilus HTA426]
Length = 327
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/329 (46%), Positives = 217/329 (65%), Gaps = 7/329 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDS-TDAGLLE 99
A +FWD++ AQ + +KD + + + + D+ VT L EE D A L+E
Sbjct: 2 AAPNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA K+L K +FEL LL+ PYD+ A++ + GAGGT++QDWA MLLRMY RW E
Sbjct: 62 EA----KKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
K+ +K ++ GEEAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 118 KKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EV+P L +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V C
Sbjct: 178 VSCEVVPEL-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQS 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY LVKD
Sbjct: 237 ERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYK 368
RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 297 HRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
Length = 368
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 236/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L ++ ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRMRADIAVLEEQAAAPSLWDNPDEAQKITSRLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA + + ++ KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLAVLFEMAEEEDDPDTRA--EAEAELADVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT + E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E+S V I E DL +
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVDIDESDLRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVRITHIPTG+ V C ERSQ+ N+ A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT HE + SV +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|359778302|ref|ZP_09281571.1| peptide chain release factor 2 [Arthrobacter globiformis NBRC
12137]
gi|359304219|dbj|GAB15400.1| peptide chain release factor 2 [Arthrobacter globiformis NBRC
12137]
Length = 359
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 230/342 (67%), Gaps = 4/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L++E+AEL +A + WD+ A AQ L+ + ++ L +++DD +V+L
Sbjct: 14 VEALKEEIAELSERAGEPDLWDDPAAAQVITSRLSHRQSELERLNTLASRIDDLEVLVEL 73
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
++ D DA + EA + ++ + K+L E+ LLSG YD+ AV++I +GAGG DA D+
Sbjct: 74 GQDED--DADSMGEAEAELESIRKSLKDLEVVTLLSGEYDEREAVVTIRSGAGGVDAADF 131
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY+RW E+ Y T V++ S EEAG+KSA EV YA+G LS E GTHR+VR
Sbjct: 132 AEMLLRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVNAPYAFGTLSVEAGTHRLVRI 191
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+PL+ E++ + IP+ ++ + R+ G GGQ+VN ++AVR+
Sbjct: 192 SPFDNQGRRQTSFAAVEVIPLI-EQTDSIDIPDNEIRVDVFRSSGPGGQSVNTTDSAVRL 250
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG V E+SQL N+ A+ L+++LL++ +EQ +E K GD VKA WG Q+
Sbjct: 251 THIPTGTVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKAFAGD-VKASWGDQM 309
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV +PY++VKD+RT HE + +V+DG ++ FI++ ++++
Sbjct: 310 RSYVLNPYQMVKDLRTEHEVGNTSAVLDGAIDDFIEAGIRWR 351
>gi|160893549|ref|ZP_02074333.1| hypothetical protein CLOL250_01103 [Clostridium sp. L2-50]
gi|156864534|gb|EDO57965.1| peptide chain release factor 2 [Clostridium sp. L2-50]
Length = 329
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/322 (44%), Positives = 212/322 (65%), Gaps = 3/322 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ A++ + L ++D + + D T++++ EE D+ ++EE ++
Sbjct: 6 FWDDVAKSTSVSRQLKKLQDSLEEYQKLEQDFSDIETLIQMAEE--EGDSSMIEEIGEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K + + ++ LLSG +D AV+++ AGAGGT++ DW ML RMY RW EK +K
Sbjct: 64 TAFQKEFENYRISLLLSGEFDGYDAVMTLHAGAGGTESCDWTSMLYRMYTRWAEKHGFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS I++ G+ AYGYL EKG HR+VR SPFNA G RQTSF+ +V+
Sbjct: 124 EVLDYLEGDEAGIKSVTIQISGQNAYGYLKSEKGVHRLVRISPFNAAGKRQTSFASCDVI 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE ++V I E+DL I R+ G GGQ++NK +AVRITHIPTG+ V+C ERSQ
Sbjct: 184 PEI-EEDLEVDINEDDLRIDTYRSSGAGGQHINKTSSAVRITHIPTGIVVQCQNERSQHM 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LK+KL +I +++ +I IRG+ ++ +G QIR+YV PY +VKD RTG E
Sbjct: 243 NKDKAMQMLKSKLYLIKKQENLDKISDIRGEILENGFGSQIRSYVMQPYTMVKDHRTGEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKY 367
+ ++ +V+DGEL+ F+ +YLK+
Sbjct: 303 SGNVAAVLDGELDGFMNAYLKW 324
>gi|379058079|ref|ZP_09848605.1| peptide chain release factor 2 [Serinicoccus profundi MCCC 1A05965]
Length = 370
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 229/351 (65%), Gaps = 6/351 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R L +L ++ ELE +A+ WD+ AQ+ AL+ K + + + ++DD
Sbjct: 19 VREVTDLDRLSAQITELETQASTPDLWDDVDNAQKVTSALSRAKAEHDKVVGMDARIDDL 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L E DA L EA + L KA+ E+ LL+G YD AV++I +GAGG
Sbjct: 79 EALVELGRE--ENDADTLVEAERELAGLKKAVQLLEVRTLLNGDYDIREAVVTIRSGAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G L+ E GT
Sbjct: 137 VDAADFAEMLMRMYLRWAERHDYPTSVLDTSYAEEAGLKSATFEVKVPYAFGTLAVEAGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNK 259
HR+VR SPF+ +G RQTSF+ EV+PL+ ES D ++IPE DL+I R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAAVEVVPLI--ESTDTIEIPEGDLKIDVFRSSGPGGQSVNT 254
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
++AVR+TH+PTG V E+SQ+ N+ AL L+++LL++ + + + K++ GD VK
Sbjct: 255 TDSAVRMTHLPTGTVVSMQNEKSQIQNRAAALRVLQSRLLLLKKAEEDAARKEMAGD-VK 313
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
A WG Q+R+YV HPY++VKD+RTGHE +V+DG+++ FI + +++K S
Sbjct: 314 ASWGDQMRSYVLHPYQMVKDLRTGHEVGSTAAVLDGDIDDFIDAGIRWKRS 364
>gi|336321416|ref|YP_004601384.1| peptide chain release factor 2 [[Cellvibrio] gilvus ATCC 13127]
gi|336104997|gb|AEI12816.1| peptide chain release factor 2 [[Cellvibrio] gilvus ATCC 13127]
Length = 370
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 239/358 (66%), Gaps = 4/358 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
++ I+A + L ++A L A+ + WD+ AQ+ AL+ + +++ + ++
Sbjct: 17 LQSIQAVSDPTALRAKIARLSEDASAPNLWDDPESAQKVTSALSSAQAELDRVDKLGARI 76
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD T+V+L +EM D L EA + + + K L + E+ LL+G YD+ AV++I AG
Sbjct: 77 DDLETLVELGQEMGDEDT--LVEAEADLAAIRKDLGELEVRTLLAGEYDEREAVVTIRAG 134
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+MLLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G+LS E
Sbjct: 135 AGGVDAADFAEMLLRMYLRWAERHGYATTVLDTSYAEEAGLKSATFEVKAPYAFGHLSVE 194
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IPE +L++ R+ G GGQ+V
Sbjct: 195 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIEIPESELKVDVFRSSGPGGQSV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL+ +E+ + K++ GD
Sbjct: 254 NTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQRQEEERAAKKEMAGD- 312
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+KA WG Q+R+YV PY++VKD+RT HE + +V DG+++ FI++ ++++ + ++A
Sbjct: 313 IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPAAVFDGDIDDFIEAGVRWRRAQDVTA 370
>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
Length = 368
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 237/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPEEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEGLRGRIDDLAVLFEMAEEEDDPDTRA--EAESELTLVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT ++E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFSV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT HE + SV +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPESVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|227497420|ref|ZP_03927652.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
15434]
gi|226833096|gb|EEH65479.1| peptide chain release factor RF2 [Actinomyces urogenitalis DSM
15434]
Length = 374
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 231/350 (66%), Gaps = 5/350 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A Q L +AEL +AA WD+ AQ L+ + + + D +++DD
Sbjct: 19 IEAVTDPQALRARIAELSEQAAAPDLWDDPDAAQVVTSNLSHAQADLKRVEDLGSRIDDL 78
Query: 81 VTIVKLTEEMDSTDAG-LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+V++ E + DA LL EA S + ++K L + E+ LLSG YD+ AV++I +GAG
Sbjct: 79 EAMVEMAGEEEGDDAAELLAEAESDLASISKDLSELEIRTLLSGEYDQRDAVVTIRSGAG 138
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
G DA D+A+MLLRMY+RW E+ Y T+V++ S EEAG+KS EV YAYG LS E G
Sbjct: 139 GVDAADFAEMLLRMYLRWAERHGYATKVLDTSYAEEAGLKSVTFEVHAPYAYGTLSVEGG 198
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVN 258
THR+VR SPF+ +G RQTSF+ EV+PL+ ES D +++PE D+ I R+ G GGQ+VN
Sbjct: 199 THRLVRISPFDNQGRRQTSFAAVEVIPLI--ESTDHIEVPETDIRIDVFRSSGPGGQSVN 256
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVRITH+PTG+ V +E+SQ+ N+ A+ L+++LL++ +++ ++ K++ GD V
Sbjct: 257 TTDSAVRITHLPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKELAGD-V 315
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KA WG Q+R+YV +PY++VKD+RT +E + SV DG+++ FI + ++++
Sbjct: 316 KASWGDQMRSYVLNPYQMVKDLRTSYEVGNPDSVFDGDIDGFIDAGIRWR 365
>gi|375010251|ref|YP_004983884.1| peptide chain release factor 2 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359289100|gb|AEV20784.1| Peptide chain release factor 2 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 327
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 218/329 (66%), Gaps = 7/329 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDS-TDAGLLE 99
A +FWD++ AQ + + +KD + + + + D+ VT L EE D A L+E
Sbjct: 2 AAPNFWDDQKAAQAVISEVNALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA K+L K +FEL LL+ PYD+ A++ + GAGGT++QDWA MLLRMY RW E
Sbjct: 62 EA----KKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
K+ +K ++ GEEAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 118 KKGFKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EV+P + +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V C
Sbjct: 178 VSCEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQS 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY LVKD
Sbjct: 237 ERSQIKNREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYK 368
RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 297 HRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
>gi|374997883|ref|YP_004973382.1| peptide chain release factor 2 [Desulfosporosinus orientis DSM 765]
gi|357216249|gb|AET70867.1| peptide chain release factor 2 [Desulfosporosinus orientis DSM 765]
Length = 367
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 235/361 (65%), Gaps = 3/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+ +K++E + + ++R S + ++++ LE + WD+ AQ+ +Q L ++
Sbjct: 4 DWKKELETLTLSLADLRVSLDVANRIEKISALETEFHRPDLWDDPENAQKIMQELALHQN 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
K+ L + + ++++ T+ +L E D D L + A +K L + + EL LLSG Y
Sbjct: 64 KVKLFQELEEELEETATLWQLAMEED--DVSLEGDVAQGVKALYQRFEALELELLLSGQY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A++++ AGAGGT+AQDW ML R+YVRWGE+ YK ++ GEEAGIKSA +
Sbjct: 122 DRNNAILTLHAGAGGTEAQDWVQMLYRLYVRWGERHGYKVETLDFLPGEEAGIKSATLSF 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G AYGY EKG HR+VR SPF+A G R TSF+ +V+P + E++ ++ I EDL I
Sbjct: 182 SGENAYGYAKSEKGVHRLVRISPFDASGRRHTSFASVDVIPEVTEDN-EITIDTEDLRID 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+GG GGQ+VNK ++A+RITH+PTG+ V+C ERSQ NK+ A+ L+AKLL + ++
Sbjct: 241 TYRSGGAGGQHVNKTDSAIRITHLPTGIVVQCQSERSQTQNKLAAMRVLQAKLLELKRKE 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ +EI +IRG+ + WG QIR+YVFHPY LVKD RT ET ++ +VMDGE++ FI +YL
Sbjct: 301 QEAEITEIRGEQQEIAWGSQIRSYVFHPYSLVKDHRTNVETGNVSAVMDGEIDEFIAAYL 360
Query: 366 K 366
+
Sbjct: 361 Q 361
>gi|239623407|ref|ZP_04666438.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522373|gb|EEQ62239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 338
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 212/334 (63%), Gaps = 6/334 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN ++ ++ ++KD++ + + + +D ++++ E DA L+ E ++
Sbjct: 6 FWDNPEKSTRMVREAKNLKDEVETFRELEQEYEDIQVMIQMGYE--ENDASLIPEIEEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ L++ + LLSG YD A++ + AGAGGT++ DW ML RMY RW EK+ +KT
Sbjct: 64 GHFSDTLEKMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKGFKT 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS +++ G AYGYL E G HR+VR SPFNA G RQTSF ++M
Sbjct: 124 EVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCDIM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + +E +D++I +D+ I R+ G GGQ++NK +A+RITH P+G V C ERSQ
Sbjct: 184 PDI-QEDIDIEINPDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGTVVTCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LK+KL ++ +E++A++ IRGD WG QIR+YV PY +VKD RTG E
Sbjct: 243 NKDKAMQMLKSKLFLLKQEEQAAKAAGIRGDVKDNGWGSQIRSYVLQPYTMVKDHRTGEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 379
+ ++ +V+DG ++ FI +YL++ MSL D N
Sbjct: 303 SGNVDAVLDGNIDSFISAYLRW---MSLGCPDKN 333
>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
COL]
gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JH1]
gi|387142448|ref|YP_005730841.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TW20]
gi|56749392|sp|Q6GB76.1|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56749443|sp|Q7A6R4.2|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56749454|sp|Q99VM1.2|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|71153100|sp|Q5HHR5.1|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115311853|sp|Q2YSH5.2|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|189040005|sp|A6TZN3.1|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
[Staphylococcus aureus subsp. aureus COL]
gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
aureus JH1]
gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TW20]
Length = 369
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>gi|227546362|ref|ZP_03976411.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
longum ATCC 55813]
gi|317482557|ref|ZP_07941572.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
gi|227213343|gb|EEI81215.1| peptide chain release factor 2 [Bifidobacterium longum subsp.
infantis ATCC 55813]
gi|316915979|gb|EFV37386.1| peptide chain release factor 2 [Bifidobacterium sp. 12_1_47BFAA]
Length = 374
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 239/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + + +L+ ++ +LE +AA WD+ AQ+ L+ +
Sbjct: 4 FDFTQAIGEARAKYESIAKALDVDRLKADIKDLETQAAAPGLWDDPENAQKITSRLSAAE 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L ++DD T+V+L E D+ L+EA I E+ K LDQ E+ LL G
Sbjct: 64 SQLKRLNSASQRIDDVETLVELGHEEGDQDS--LDEAQGEIGEIQKDLDQMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRASAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETS +V DG++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDINAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|419718187|ref|ZP_14245519.1| peptide chain release factor 2 [Lachnoanaerobaculum saburreum
F0468]
gi|383305632|gb|EIC96985.1| peptide chain release factor 2 [Lachnoanaerobaculum saburreum
F0468]
Length = 337
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 211/334 (63%), Gaps = 4/334 (1%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
SFWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E ++
Sbjct: 5 SFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEAM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
++E K +D ++ LL+G YD A++ + AGAGGT++ DW ML RMY RW K+ Y
Sbjct: 63 LEEFTKEIDALKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEGYT 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
V++ G+EAGIKS +++ G AYGYL E G HR+VR SPFNA G RQTSF ++
Sbjct: 123 VDVLDILEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCDI 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V+C ERSQ
Sbjct: 183 MPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQF 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY +VKD RTG
Sbjct: 242 QNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRTGA 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 302 ESGNVTAVMDGDIDKFIIAYLTWQ-SLGCPARNA 334
>gi|455649556|gb|EMF28360.1| peptide chain release factor 2 [Streptomyces gancidicus BKS 13-15]
Length = 368
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 239/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L ++ ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKMRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ ++++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRSRIDDLAVLFEMAEEEDDPDTRA--EAESELTSVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT ++E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTELIETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|386846030|ref|YP_006264043.1| Peptide chain release factor 2 [Actinoplanes sp. SE50/110]
gi|359833534|gb|AEV81975.1| Peptide chain release factor 2 [Actinoplanes sp. SE50/110]
Length = 381
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 237/366 (64%), Gaps = 7/366 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF K ++A +E + + +L + AELE +A+ WD++A AQ+ L+
Sbjct: 16 DFPEQLKALDATLRNIENV---LDVDKLRRNKAELEEQASAPDLWDDQARAQDVNSRLSY 72
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +I+ L +T++DDA ++++ E DAG + E I L KA+++ E+ LLS
Sbjct: 73 VSGEISKLERLRTRLDDAGLLLEMAEA--EGDAGSVAEVGDEITALTKAIEEMEVRTLLS 130
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+ML+RMY+RW E+ Y T V + S EEAG+KSA
Sbjct: 131 GEYDSREALVAIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTEVYDTSYAEEAGLKSAT 190
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EVMP++ E++ + IP+ +L
Sbjct: 191 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVMPVV-EQTDHIDIPDNEL 249
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
R+ G GGQ+VN ++AVR+THIPTG+ V C E+SQL NK AL L+A+LL
Sbjct: 250 RTDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERK 309
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ +++ ++ D + WG Q+R+YV HPY++VKD+RT ET + +SV DG+++ FI+
Sbjct: 310 RQEEEAKMAGLKQDTTGS-WGDQMRSYVLHPYQMVKDLRTEFETGNPMSVFDGDVDGFIE 368
Query: 363 SYLKYK 368
+ ++++
Sbjct: 369 AGIRWR 374
>gi|379795225|ref|YP_005325223.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872215|emb|CCE58554.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 369
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/361 (40%), Positives = 227/361 (62%), Gaps = 4/361 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E ++ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMSEPNFWDNQTKAQDIIDKNNALKSI 65
Query: 67 INLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+N + +DD T L EE D LE+ + + +D++EL LL GP+
Sbjct: 66 VNGYKKLQQDVDDMEATWELLQEEFDEEMKVDLEQD---VIDFKAKVDEYELQLLLDGPH 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + +
Sbjct: 123 DANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 183 KGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVD 242
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E+
Sbjct: 243 TFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEE 302
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDGE+ PFI+SYL
Sbjct: 303 QAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYL 362
Query: 366 K 366
+
Sbjct: 363 R 363
>gi|218132301|ref|ZP_03461105.1| hypothetical protein BACPEC_00159 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992816|gb|EEC58817.1| peptide chain release factor 2 [[Bacteroides] pectinophilus ATCC
43243]
Length = 333
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/323 (46%), Positives = 208/323 (64%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ ++QE ++ L +KD + K MDD T++ + +E D L+ E
Sbjct: 6 FWDDADKSQEAMKELKSLKDSFEKYNELKQGMDDIETLIAMADE--ENDESLVPEVEEEF 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K D + LLSG YD++ A++++ AGAGGT+A DW ML+RMY RW E + YKT
Sbjct: 64 NVFEKKFDALRIGTLLSGEYDRDNAILTLHAGAGGTEACDWCQMLMRMYTRWAESKGYKT 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
VV+ G+EAG+K+ IE+EG AYGYL E G HR+VR SPFNA G RQTSF +VM
Sbjct: 124 EVVDYLEGDEAGVKAVTIEIEGENAYGYLRSEHGIHRLVRISPFNAAGKRQTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +DV+I ++DL I R+ G GGQ++NK +A+RITH+PTG+ V+C ERSQ
Sbjct: 184 PDI-EEDVDVEINDDDLRIDTYRSSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQHQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKL ++ +++ A + IRGD +G QIR+YV PY +VKD RT E
Sbjct: 243 NKDKAMQMLKAKLYLLKKQENAEKTSDIRGDVKDVNFGSQIRSYVLQPYTMVKDHRTNEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ SV+DG ++PFI +YLK++
Sbjct: 303 VGNAQSVLDGNIDPFITAYLKWQ 325
>gi|334881786|emb|CCB82692.1| peptide chain release factor 2 (RF-2) [Lactobacillus pentosus
MP-10]
gi|339637510|emb|CCC16442.1| peptide chain release factor 2 (RF-2) [Lactobacillus pentosus IG1]
Length = 357
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 215/343 (62%), Gaps = 5/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L L + + E E + A+ FWD++A AQ+ + +K K ++ D AV
Sbjct: 12 LDALNESIQENEARMAEPGFWDDQAAAQKVIDDNNALKSKYETFKQLSDEVGDLAVAYEL 71
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
L+EE DA + E + K L Q+ L+ LL GPYD+ A++ I GAGGT++QD
Sbjct: 72 LSEE---PDAEMQAEFETDFKHAEHDLQQYRLSLLLDGPYDRNNAILEIHPGAGGTESQD 128
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
W MLLRMY RW +K V+ G+EAGIKS + + G AYGYL EKG HR+VR
Sbjct: 129 WGSMLLRMYTRWAASHDFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVHRLVR 188
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+A G R TSF+ +VMP L ++++D+ + EDL+I RA G GGQ+VNK +AVR
Sbjct: 189 ISPFDAAGRRHTSFASVDVMPEL-DDTVDIDVRPEDLKIDVYRASGAGGQHVNKTSSAVR 247
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITHIPTG+ V +RSQL N+ AL+ L+AKL EE++A E I+G+ + WG Q
Sbjct: 248 ITHIPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQ 307
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
IR+YVFHPY +VKD RT +E+ D +VMDG+L+PF+ +YL++K
Sbjct: 308 IRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350
>gi|358068069|ref|ZP_09154539.1| peptide chain release factor 2 [Johnsonella ignava ATCC 51276]
gi|356693613|gb|EHI55284.1| peptide chain release factor 2 [Johnsonella ignava ATCC 51276]
Length = 339
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 150/323 (46%), Positives = 209/323 (64%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASI 104
FW+N + +TL+ L ++K I + + ++ +++L EE D T +L E ++
Sbjct: 6 FWENSESSTKTLRELKNLKAGIEEYKNLENLYEEIEVLIELGYEEEDRT---VLGEIENL 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
I EL + LD+ + LLSGPYD A+I + AG GGT+A DW +L RMY RW + + Y
Sbjct: 63 INELGEKLDEVKTKTLLSGPYDSCSAIIKLNAGVGGTEACDWCSILYRMYTRWAQSKSYS 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
V++ GEEAGIKS ++V G AYGYL GE G HR+VR SPFNA G RQTSF +V
Sbjct: 123 IEVLDFLDGEEAGIKSVTVQVNGENAYGYLKGEHGIHRLVRISPFNAAGKRQTSFVSCDV 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP + EE +D+ + +D++I RA G GGQ+VNK +AVR+THIPTGV V+C ERSQL
Sbjct: 183 MPDI-EEDIDIDLNPDDIKIDTFRASGAGGQHVNKTSSAVRMTHIPTGVVVQCQNERSQL 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
NK KAL LKAKLL+I ++ ++ IRGD + W QIR+YV PY +VKD RT
Sbjct: 242 RNKEKALQILKAKLLIIKQQANVEKLSDIRGDVKEIGWSSQIRSYVMQPYTMVKDHRTAC 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKY 367
E+S++ +V+DG ++ FI +YL +
Sbjct: 302 ESSNVSAVLDGGIDDFISAYLTW 324
>gi|260438124|ref|ZP_05791940.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
gi|292809448|gb|EFF68653.1| peptide chain release factor 2 [Butyrivibrio crossotus DSM 2876]
Length = 372
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 224/361 (62%), Gaps = 3/361 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
R ++ + + ++E+R++ L K++ ELEM D FW++ +Q+ L+ L +KD
Sbjct: 7 FRYELNSYDEPLKELRSALDLDNKAKKIEELEMHMEDQGFWNDPETSQKKLKELKALKDA 66
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + DDA T +++ +E D ++ + ++ E ++ ++ LLS YD
Sbjct: 67 FTNYNELEKLRDDARTFMEIADE--ENDTSIIPDIEELVNEFKNLFEKVRISTLLSEEYD 124
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + AGAGGT++ DWA MLLRMY RW E + Y ++ G+EAG+KS I++
Sbjct: 125 NCNAILKLNAGAGGTESCDWASMLLRMYTRWAESKGYTVETLDYLDGDEAGVKSVTIQIN 184
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL E+G HR+VR SPFNA G RQTSF +VMP + EE +DV I E+DL I
Sbjct: 185 GENAYGYLKSERGVHRLVRISPFNANGKRQTSFVSCDVMPDI-EEDLDVDINEDDLRIDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+ G GGQ++NK +A+RITHIPTG+ V+C ERSQ NK KA+ LKAKL ++ +++
Sbjct: 244 YRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKQQEN 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A + IRG+ + WG QIR+Y+ PY LVKD RT E+ + +V+DG ++ F+ YLK
Sbjct: 304 AEKEAGIRGEVKEIGWGNQIRSYILQPYTLVKDHRTNAESGNAQAVLDGNIDLFLGEYLK 363
Query: 367 Y 367
+
Sbjct: 364 W 364
>gi|325295572|ref|YP_004282086.1| hypothetical protein Dester_1396 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066020|gb|ADY74027.1| hypothetical protein Dester_1396 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 374
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 242/362 (66%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ ++E D+ EIR +++++K+L E+E + + ++FW+++ +AQ ++ +
Sbjct: 8 LKTELEKVKDKYFEIRGYFDIEKMKKKLTEIEEEMSSANFWNDQKKAQSISMERNRIESE 67
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + + +++D T++++ EE L+EA S +K + + L+ E+ +LSG +D
Sbjct: 68 LNTFSSIEQQLEDIETLLEIAEEESEESL--LDEAESFLKNIERELNSLEVKTVLSGEFD 125
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A+++I AGAGGT++ DWA+ML+RMY+RW E++ ++T +++ EEAGIKSA I ++
Sbjct: 126 KNNAIVTIHAGAGGTESCDWAEMLMRMYLRWAERKGFETEILDLQENEEAGIKSATILIK 185
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYG L E GTHR+VR SPF++ R TSF G V+P + E+ +EDL I
Sbjct: 186 GAYAYGLLRAEHGTHRLVRISPFDSNARRHTSFCGVIVVPEIDEDIDIEI-KDEDLRIDT 244
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK ++AVRITH+PTG+ V C ERSQ+ N+ +A+ LKA+L + ++R
Sbjct: 245 YRASGAGGQHVNKTDSAVRITHLPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKR 304
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+I + RG+ WG QIR+YVFHPY++VKD RTG ETS+I +VMDGE++ FI+ +LK
Sbjct: 305 EEKIAEARGEHKTIAWGNQIRSYVFHPYQMVKDHRTGIETSNINAVMDGEIDQFIEGFLK 364
Query: 367 YK 368
K
Sbjct: 365 QK 366
>gi|386760146|ref|YP_006233363.1| peptide chain release factor 2 [Bacillus sp. JS]
gi|384933429|gb|AFI30107.1| peptide chain release factor 2 [Bacillus sp. JS]
Length = 327
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/331 (44%), Positives = 217/331 (65%), Gaps = 7/331 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D+ L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLNESHEELQMTHDLLKEEPDSDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RWGE
Sbjct: 58 ELEKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 118 RRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C
Sbjct: 178 VSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD
Sbjct: 237 ERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 297 HRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|320547182|ref|ZP_08041476.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
gi|320448169|gb|EFW88918.1| peptide chain release factor RF2 [Streptococcus equinus ATCC 9812]
Length = 336
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 223/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNSLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS + L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQDWADM
Sbjct: 61 DDSIQSELEE----TLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + +K ++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSFS EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFSSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG+++ FI ++LK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334
>gi|387779889|ref|YP_005754687.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
LGA251]
gi|344176991|emb|CCC87455.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
LGA251]
Length = 369
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKALQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>gi|317124427|ref|YP_004098539.1| peptide chain release factor 2 (bRF-2) [Intrasporangium calvum DSM
43043]
gi|315588515|gb|ADU47812.1| bacterial peptide chain release factor 2 (bRF-2) [Intrasporangium
calvum DSM 43043]
Length = 370
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/373 (41%), Positives = 246/373 (65%), Gaps = 7/373 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF KD+ A D V R L L K++ ELE +A++ + WD++ +AQ+ AL+
Sbjct: 4 DFTQEIKDLRATMDSV---RGVTDLDVLAKQIVELERQASEPNLWDDQDKAQQVTSALSR 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ + + ++++D T+V++ E +D ++EA + ++ K L + E+ LLS
Sbjct: 61 ANAERDRVLSMDSRINDLETLVEMATE--ESDQDTMDEALRDLAKIKKDLGELEVRTLLS 118
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD+ AV++I AGAGG DA D+A+ML+RMY+RW E+ Y T+V++ S EEAG+KSA
Sbjct: 119 GEYDEREAVVTIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSAT 178
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
EV YA+G+L+ E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E ++IPE +L
Sbjct: 179 FEVNVPYAFGHLNVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-ESDDSIEIPENEL 237
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+I R+ G GGQ+VN ++AVR+TH+PTG+ V E+SQ+ N+ AL L+++LL+
Sbjct: 238 KIDVFRSSGPGGQSVNTTDSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQR 297
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+ + A+ K++ GD VKA WG Q+R+YV +PY++VKD+RT ET + +V DG+++ FI+
Sbjct: 298 KAEEAAVKKEMAGD-VKASWGDQMRSYVLNPYQMVKDLRTDFETGNPAAVFDGDIDGFIE 356
Query: 363 SYLKYKYSMSLSA 375
+ ++++ + +A
Sbjct: 357 AGIRWQIAQKKAA 369
>gi|226314892|ref|YP_002774788.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
gi|226097842|dbj|BAH46284.1| peptide chain release factor 2 [Brevibacillus brevis NBRC 100599]
Length = 370
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 228/364 (62%), Gaps = 3/364 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D ++++++ + + R+ +IR S L ++ + ELE + FWD+ AQ+T+ L
Sbjct: 5 DIADIKQEMSSMAKRLADIRGSLDLPVKQERIGELEERMLAPDFWDDNDAAQKTISELNA 64
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K + + ++ +D +++L ++ D+ L+ + +EL K+ + FEL LLS
Sbjct: 65 IKSLVETMAKLDSQYEDLQVMLELV--IEEGDSSLIPDLYDSTQELRKSFESFELELLLS 122
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
YDK A++ + GAGGT++QDWA MLLRMY RWG+ + +K ++ G+EAG+KS
Sbjct: 123 DEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWGDAKGFKVETLDYLPGDEAGVKSVT 182
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ ++G AYGYL EKG HR+VR SPF+A G R TSF V+P + ++++ V I EDL
Sbjct: 183 LLIKGYNAYGYLKSEKGVHRLVRISPFDASGRRHTSFVSCNVLPEIEDDNV-VDIRTEDL 241
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+ G GGQ++N ++AVRITH+P+G+ V C ERSQ+ N+ +A+ L A+L
Sbjct: 242 KVDTYRSSGAGGQHINTTDSAVRITHLPSGIVVTCQTERSQIKNRERAMKMLTARLFEKK 301
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
E++ + I+G+ WG QIR+YVFHPY LVKD RT E ++ +VMDGE++ FI
Sbjct: 302 REEQEKTLAAIQGEQKDIAWGSQIRSYVFHPYSLVKDHRTNMEVGNVQAVMDGEIDSFID 361
Query: 363 SYLK 366
+YL+
Sbjct: 362 AYLR 365
>gi|350565918|ref|ZP_08934640.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
gi|348663296|gb|EGY79887.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
Length = 348
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 151/345 (43%), Positives = 226/345 (65%), Gaps = 8/345 (2%)
Query: 25 AGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIV 84
AGL++ KEL + K + +FWDN AQ+ ++ L + K++ K+++A ++
Sbjct: 7 AGLREKVKELND---KQLEPNFWDNSESAQKVIKELNHHQGKVDKYDKLSKKIEEANDLI 63
Query: 85 KLTE-EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+L E E D T +E ++++ K D+F+L LL+G YD +++I AGAGGT+A
Sbjct: 64 ELMELEEDFT---FYDEFKKDLEDIEKFADEFKLETLLNGEYDANDCILTIHAGAGGTEA 120
Query: 144 QDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
QDWA MLLRMY R+ E + +K +++ +EAGIKSA + + G YGY+ GEKG HR+
Sbjct: 121 QDWASMLLRMYTRYAESKGFKVEILDIQKEDEAGIKSATLLISGDNGYGYMKGEKGVHRL 180
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VR SPF++ R TSFS +V P + + +++V+I EDL++ R+ G GGQ+VN ++A
Sbjct: 181 VRISPFDSNKRRHTSFSSVDVYPQI-DGAVEVEIRAEDLKVDTYRSSGAGGQHVNTTDSA 239
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VRITHIPTG+ V+C ERSQ+ N+ A++ LKAKL+ +AEE++ +I ++G+ + WG
Sbjct: 240 VRITHIPTGIVVQCQNERSQIQNRETAMNMLKAKLIALAEEEQKEKIDDLQGNYSQIAWG 299
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
QIR+YVF PY LVKD RT E D+ VMDG+L+ FI SYL+ K
Sbjct: 300 SQIRSYVFQPYTLVKDHRTNTEVGDVNRVMDGDLDEFINSYLQLK 344
>gi|380302988|ref|ZP_09852681.1| peptide chain release factor 2 [Brachybacterium squillarum M-6-3]
Length = 371
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 147/343 (42%), Positives = 232/343 (67%), Gaps = 6/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L++++A+LE +A+ WD+ AQ+ AL+ + +T+ +++D +V+L
Sbjct: 26 IEALDRKIADLEQQASAPDLWDDVENAQKVSAALSHAQADRRRITELSQRIEDLEVMVEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA L EA + K +D+ E+ LLSG YD+ AV++I AGAGG DA D+
Sbjct: 86 AAEED--DADTLAEAERDFAGIRKTIDELEVRTLLSGEYDERSAVVTIRAGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+MLLRMY RW E+ +Y +V++ S EEAG+KS EV +AYG LS E GTHR+VR
Sbjct: 144 AEMLLRMYTRWAERHQYTVKVMDTSYAEEAGLKSVTFEVTAPFAYGTLSVEGGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+ +G RQTSF+ EV+PL+ ES D +++PE +L++ R+ G GGQ+VN ++AVR
Sbjct: 204 SPFDNQGRRQTSFAAVEVIPLI--ESTDSIEVPESELKVDVFRSSGPGGQSVNTTDSAVR 261
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
+THIPTG+ V +E+SQ+ N+ AL ++++LL++ + + A+E K++ GD VKA WG Q
Sbjct: 262 MTHIPTGIVVSMQDEKSQIQNRAAALRVMQSRLLLLKKAEEAAERKELAGD-VKASWGDQ 320
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+R+YV +PY++VKD+RT ++ + SV DGE++ FI + ++++
Sbjct: 321 MRSYVLNPYQMVKDLRTEYQEGNPSSVFDGEIDEFIDAGIRWR 363
>gi|406964051|gb|EKD89981.1| hypothetical protein ACD_32C00109G0023 [uncultured bacterium]
Length = 358
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 229/356 (64%), Gaps = 12/356 (3%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
DR ++I S L++++ ELE + FW+N E+Q + L+D + + L + ++
Sbjct: 13 DRFDKISLSIDRDNLQRKVRELEAQTMKEGFWNNPQESQVLSRQLSDKQKTLQTLDELES 72
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++ +++ I S + + E+ + I+E+ KALD+ EL LS P+D+ A+ISI
Sbjct: 73 RIQNSLEI--------SEEPSMQEDLKTEIREIEKALDKLELKLFLSNPHDESEAIISIH 124
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
+G GG +A DWA ML RMY R+ EK +K + ++ GEEAGIK+ + V +A+GYL
Sbjct: 125 SGTGGVEAMDWAAMLTRMYQRYLEKAEWKYEITDEDPGEEAGIKTVSMIVHEAFAFGYLK 184
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLL-PEESMDVQIPEEDLEISFSRAGGKGG 254
GE GTHR+VRQSPFNA LRQTSF+ EV+P++ P E V+I E D+E R+GG GG
Sbjct: 185 GEAGTHRLVRQSPFNADKLRQTSFALVEVLPVINPSE---VEINESDIEFDAFRSGGAGG 241
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
QNVNKV TAVR+ HIPTG+TV ERSQL N+ A+ L AKL + + Q E ++++
Sbjct: 242 QNVNKVSTAVRLKHIPTGITVTAQTERSQLQNRENAMKLLLAKLWALTQAQGKKEQEKLK 301
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
G+ +A WG QIR+YV HPY +VKD+RT ETSD +V+DG+L PFI++ LK S
Sbjct: 302 GEIRQASWGTQIRSYVLHPYHMVKDLRTEVETSDTDAVLDGDLTPFIEAELKLSTS 357
>gi|171780065|ref|ZP_02920969.1| hypothetical protein STRINF_01853 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281413|gb|EDT46848.1| peptide chain release factor 2 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 336
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 223/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS A L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQDWADM
Sbjct: 61 DDSIQAELEE----TLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + +K ++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSFS EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T +R+THI
Sbjct: 177 DSAKRRHTSFSSVEVMPEL-DDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGIRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG+++ FI ++LK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334
>gi|220932479|ref|YP_002509387.1| peptide chain release factor 2 [Halothermothrix orenii H 168]
gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
orenii H 168]
Length = 331
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 209/325 (64%), Gaps = 2/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D WD+ +A+E + VKD+I L ++A +++L EE D T+ L E
Sbjct: 2 SDPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELAEE-DETNRELWSEV 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + +D+ EL L+G YD A++SI GAGGT++QDWADMLLRMYVRW E
Sbjct: 61 EDYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESH 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
YK ++ G+EAGIK + + G Y+YGYL GEKG HR+VR SPF++ G R TSF+
Sbjct: 121 GYKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
V+P + ++ DL+I RA G GGQ+VNK ++AVRITHIPTG+ V+C ER
Sbjct: 181 VNVIPEIDDDIEVDIDTG-DLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNER 239
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ NK A+ LKA+LL + +E RA +I+++RG+ + WG QIR+YVFHPY L+KD R
Sbjct: 240 SQHKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHR 299
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
TG E ++ VMDG ++ FI++YLK
Sbjct: 300 TGLEEGNVQKVMDGYIDEFIEAYLK 324
>gi|256824891|ref|YP_003148851.1| peptide chain release factor 2 [Kytococcus sedentarius DSM 20547]
gi|256688284|gb|ACV06086.1| bacterial peptide chain release factor 2 (bRF-2) [Kytococcus
sedentarius DSM 20547]
Length = 370
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 238/352 (67%), Gaps = 6/352 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E +R L +L+++LA+LE +++ WD+ Q+ A++ V+ ++ + +++
Sbjct: 16 MESVREVIDLPRLKEQLADLEQQSSAPDLWDDPENGQKVSAAMSRVRGEVERIESMDSRI 75
Query: 78 DDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
DD +V++ TEE DA L EA + + A+++ E+ LLSG YD+ AVI+I A
Sbjct: 76 DDLEVLVEMGTEE---GDAETLAEATKELAAIQAAVEKLEVRTLLSGEYDEREAVITIRA 132
Query: 137 GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSG 196
GAGG DA D+A+ML+RMY+RW E+ Y T+V++ S EEAG+KS EV YAYG L
Sbjct: 133 GAGGVDAADFAEMLMRMYLRWAERHEYPTKVLDTSYAEEAGLKSVTFEVNVPYAYGNLVV 192
Query: 197 EKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQN 256
E GTHR+VR SP++ +G RQTSF+ EV+P++ E++ ++IPE ++++ R+ G GGQ+
Sbjct: 193 EGGTHRLVRISPYDNQGRRQTSFAAVEVVPVI-EQTDSIEIPENEIKVDVFRSSGPGGQS 251
Query: 257 VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 316
VN ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL+ + + A+E K++ GD
Sbjct: 252 VNTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLQRKAEEAAERKELAGD 311
Query: 317 AVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+KA WG Q+R+YV HPY++VKD+RT HE + SV DG+++ FI++ +++K
Sbjct: 312 -IKASWGDQMRSYVLHPYQMVKDLRTEHEVGNTQSVFDGDIDGFIEAGIRWK 362
>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
Length = 326
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 205/325 (63%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW+++ AQ + +KD +N ++ +L +E D L EE
Sbjct: 2 SDPNFWNDQQAAQTVINEANGLKDAVNQFNHLDETYENLQVSYELVKE--EYDEDLAEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +KEL ++ FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 VSELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
++MP +E + + I EDL++ RA G GGQ++N ++AVRITH+PT V V C ER
Sbjct: 180 CDIMPEFNDE-ISIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL + E++ ++ +IRG+ WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E + SVMDG+L+PFI +YL+
Sbjct: 299 TNTEVGNTQSVMDGDLDPFIDAYLR 323
>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 370
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 224/341 (65%), Gaps = 3/341 (0%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L++E+ L+ + AD +FW++ +AQE + +K+ + K+ D ++L
Sbjct: 27 EKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKLEEILKIDKKVKDLQDYIQLL 86
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
E D L E I L K L++ E++ LLS D + A++++ AG+GG +A DW
Sbjct: 87 EM--EKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKNAILTLQAGSGGVEACDWT 144
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
ML+RMY+RW E + ++ +V+ + AGIKSA I ++G +AYGYL GE+G HR+VR S
Sbjct: 145 QMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPFAYGYLKGEQGVHRLVRIS 204
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+A R TSF+ V+P + EE + V+I EEDL I RA G GGQ+VNK ++AVRIT
Sbjct: 205 PFDANKRRHTSFAAVSVIPEIDEE-IKVEINEEDLRIDTFRASGAGGQHVNKTDSAVRIT 263
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C ERSQL NK+KAL+ LKAKL + +++ + K++ G+ WG QIR
Sbjct: 264 HIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEKQKELEGEKKDITWGNQIR 323
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+YVF PY++VKD+RTG+E ++ +VMDG+++ FI+SYLK+K
Sbjct: 324 SYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYLKWK 364
>gi|313207347|ref|YP_004046524.1| peptide chain release factor 2 [Riemerella anatipestifer ATCC 11845
= DSM 15868]
gi|386320651|ref|YP_006016813.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
gi|416110319|ref|ZP_11591934.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
gi|442315385|ref|YP_007356688.1| Protein chain release factor B [Riemerella anatipestifer RA-CH-2]
gi|312446663|gb|ADQ83018.1| bacterial peptide chain release factor 2 (bRF-2) [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|315023242|gb|EFT36252.1| peptide chain release factor 2 [Riemerella anatipestifer RA-YM]
gi|325335194|gb|ADZ11468.1| Protein chain release factor B [Riemerella anatipestifer RA-GD]
gi|441484308|gb|AGC40994.1| Protein chain release factor B [Riemerella anatipestifer RA-CH-2]
Length = 376
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 218/351 (62%), Gaps = 5/351 (1%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
S RV ++ + + + E+ + K A FWDN EA+ L+ L K + +
Sbjct: 17 SQRVSDLHKYLQIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDYEEIH 76
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
T ++D +++ +E D A LE A + E ++ E +LS D+ AV+ I
Sbjct: 77 TGLEDLQVLIEFAKE-DPDSAQELETAYPTLLE---KVENLEFKNMLSNEGDELSAVLQI 132
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
TAGAGGT++ DWA ML+RMY+ W +K YK + + G+ AG+K+ +E+EG YA+GYL
Sbjct: 133 TAGAGGTESCDWASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYAFGYL 192
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
GE G HR+VR SPF++ R TSF+ V PL+ ++S+++ I D+ RA G GG
Sbjct: 193 KGENGVHRLVRISPFDSNAKRHTSFASVYVYPLV-DDSIEININPADISFETMRASGAGG 251
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
QNVNKVETAVR+ H PTG+ + +E RSQL NK KAL LK++L I E+R +I
Sbjct: 252 QNVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMRARNEIE 311
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ +K EWG QIRNYV HPYKLVKDVR+GHETSD+ +VM+GE+ PF+K+YL
Sbjct: 312 ANKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYL 362
>gi|195977853|ref|YP_002123097.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225870173|ref|YP_002746120.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
4047]
gi|414563741|ref|YP_006042702.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|195974558|gb|ACG62084.1| peptide chain release factor 2 PrfB [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|225699577|emb|CAW93198.1| peptide chain release factor 2 [Streptococcus equi subsp. equi
4047]
gi|338846806|gb|AEJ25018.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 338
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 222/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L ++K D + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHDMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS L AS+IK L++ L +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 61 DDSVKEEL---EASLIK-LSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + +K ++ G+EAGIKS + +EG AYG+L E G HR+VR SPF
Sbjct: 117 LFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFVSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|433602857|ref|YP_007035226.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
gi|407880710|emb|CCH28353.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/366 (43%), Positives = 231/366 (63%), Gaps = 11/366 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ D++ S + I A L L ++AELE AA WD++ +AQ L+ +
Sbjct: 4 DVEADIKDLSATLASIEAVMDLASLRAQVAELEEAAARPDLWDDQEQAQRVTSQLSHKQG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + + ++DD + +L E D D G L EA + ++L + E+ LLSG Y
Sbjct: 64 ELRRVVALRDRLDDLSVLYELAE--DEGDEGSLAEADTEHRKLRDEISSLEVRTLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A+++I A AGG DA D+A+MLLRMY RW E+ Y V + S EEAGIKSA +
Sbjct: 122 DERNALVTIRAEAGGIDAADFAEMLLRMYSRWAERHGYPVDVFDTSYAEEAGIKSATFRI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ V I E+DL +
Sbjct: 182 TAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVV-EQTDHVDIDEKDLRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQL NK A++ L+AKLL E Q
Sbjct: 241 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKLL---ERQ 297
Query: 306 RASEIKQIRGDAVK---AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
R E Q R DA+K + WG Q+R+YV HPY++VKD+RT HE + +V+DGE++ F++
Sbjct: 298 RQEE--QARMDALKDSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLE 355
Query: 363 SYLKYK 368
+ ++++
Sbjct: 356 AGIRWR 361
>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
prevotii DSM 20548]
Length = 367
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 226/365 (61%), Gaps = 1/365 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M++ + LR D+E S +++ I S LEKE+ ELE ++A FW++ +AQ+ + L
Sbjct: 1 MKEIFELRSDIEDLSQKLKLIGDSLDPASLEKEIKELEKQSASPDFWNDSDKAQKIMADL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
KD+++ + + D ++ L E + + +EE +K L K Q +L
Sbjct: 61 ASKKDELSDYKKLENGLVDNTDMLDLVEMSEEKETDTIEEVEDSLKNLAKLATQMKLRTQ 120
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L G YDK A ISI AGAGG +A DWADML RMY R+ + +K + + + E GIKS
Sbjct: 121 LDGEYDKNNAYISINAGAGGLEATDWADMLFRMYKRYFDSIGFKYEIKDLNNEEAGGIKS 180
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A + V G YAYGYL EKG HR+VR SPF+++ R TSF+ +V P L +E++++ I
Sbjct: 181 ATMHVTGPYAYGYLKAEKGVHRLVRISPFDSQSRRHTSFASVDVFPEL-DENIELDIDPS 239
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ+VNK ++AVRITHIPTGV ERSQ+ N+ A++ LK+KL+
Sbjct: 240 DLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERSQIQNRQTAMNLLKSKLVQ 299
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I EE++ +I+ I+G + WG QIR+YVF PY LVKD RTG E ++ +VMDG+++ F
Sbjct: 300 IKEEEQREKIEDIQGSYSQIAWGSQIRSYVFQPYTLVKDHRTGFEMGNVEAVMDGDIQGF 359
Query: 361 IKSYL 365
I ++L
Sbjct: 360 IDAFL 364
>gi|313895325|ref|ZP_07828882.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976220|gb|EFR41678.1| peptide chain release factor 2 [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 368
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 236/363 (65%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L+ + ++++++R S + E+++AELE K ++ +FWD+ A AQ+ Q L +K
Sbjct: 4 DLKPTLNDLGEKLDQMRISLEIPAKEEKIAELEYKMSEPTFWDDAAAAQKVNQELAGLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ K +DA T+ ++ ++ D + + + + + + L+ +L LLSG Y
Sbjct: 64 GVDTYKALAAKYEDAETLYEMG--IEENDPSMERDIRAELDLIAEGLETLQLEVLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ AGAGGT+AQDW MLLRMY RW E+ + + G+EAG+KSA + +
Sbjct: 122 DANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFTVETADLQPGDEAGVKSASLFI 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYG+L EKG HR+VR SPF+++ R TSFS +VMP + +++++V I +D+ +
Sbjct: 182 KGHNAYGFLKSEKGVHRLVRISPFDSQARRHTSFSACDVMPEI-DDAVEVDIDMDDVRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
+ RA G GGQ++NK +AVR+TH PTG+ V+C ERSQL NK + L L+AKL + +E+
Sbjct: 241 YYRASGAGGQHINKTSSAVRMTHEPTGIVVQCQNERSQLQNKEQCLKMLRAKLFELEQEK 300
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ E+ ++ G K EWG QIR+YVF PY +VKDVRT ET ++ +VMDGE++PFI++YL
Sbjct: 301 KEEELAKLEGVQQKIEWGSQIRSYVFQPYTMVKDVRTNAETGNVQAVMDGEIDPFIRAYL 360
Query: 366 KYK 368
K
Sbjct: 361 NAK 363
>gi|227872846|ref|ZP_03991157.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
gi|227841316|gb|EEJ51635.1| peptide chain release factor RF2 [Oribacterium sinus F0268]
Length = 378
Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 230/377 (61%), Gaps = 6/377 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ + + ++++ A+ L K + EL+ + FW + +A +
Sbjct: 1 MIEFDQFKSELSSKEEPLQQLEAALDLDTKRKRIIELDRMMEEPDFWGDPEKANKLSTEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+KD++ T K +D ++++ +E D ++ E ++ ++ LDQ T L
Sbjct: 61 RHLKDELEGFTALKGNYEDIEALIQMGKE--ENDDSVIPEIRELLDSFSERLDQMNTTLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD ++ + AGAGGT+A DWA +L RMY RW E+ + ++++ G+EAGIKS
Sbjct: 119 LSGEYDSMNVILRLNAGAGGTEANDWAGILYRMYTRWAERHGFTVKILDYLDGDEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+EV G YAYGYL E G HR+VR SPFNA+G RQTSF +VMP + E +D++I EE
Sbjct: 179 VTMEVVGEYAYGYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDI-ETDIDIEIREE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+++ RA G GGQ++NK +AVR+ HIPTG C EERSQL NK KA+ LK KL +
Sbjct: 238 DIKMEVFRASGAGGQHINKTSSAVRLIHIPTGFVAACQEERSQLQNKNKAMQMLKTKLYL 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+E++ +++ IRG+ WG QIR+YV PY++VKD+RTG E+ + +V+DG+++ F
Sbjct: 298 KEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEESGNTDAVLDGDIDRF 357
Query: 361 IKSYLKYKYSMSLSASD 377
I +YLK+ M L D
Sbjct: 358 ISAYLKW---MQLGCPD 371
>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
Length = 370
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 223/341 (65%), Gaps = 7/341 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L +++ ELE +A D S WD+ A AQ+ AL+ + KI L ++++DD + +L EE
Sbjct: 28 LAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLESLRSRVDDMPVMFELAEE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L ++ +++L A++ E+T +LSG YD AVI+I +GAGG DA DWA+M
Sbjct: 88 --EGDTALADDE---LEDLGAAIEALEVTTMLSGEYDPREAVINIRSGAGGVDAADWAEM 142
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY RW EK +K V + S EEAGIKSA V G Y YG LS E+G HR+VR SPF
Sbjct: 143 LMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRISPF 202
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+P++ E++ + +P+ D+ + R+ G GGQ+VN ++AVR+THI
Sbjct: 203 DNQGRRQTSFAEVEVLPVV-EQTDHIDVPDGDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 261
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R+Y
Sbjct: 262 PTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAELDAL-GAGGNASWGNQMRSY 320
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
V HPY++VKD+RT +E D V+DG+L+ F+++ ++++ +
Sbjct: 321 VLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFLEAGIRWRMA 361
>gi|221311479|ref|ZP_03593326.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315806|ref|ZP_03597611.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320721|ref|ZP_03602015.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221325006|ref|ZP_03606300.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321313075|ref|YP_004205362.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
gi|384177161|ref|YP_005558546.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|418031253|ref|ZP_12669738.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|449095977|ref|YP_007428468.1| peptide chain release factor [Bacillus subtilis XF-1]
gi|452912348|ref|ZP_21960976.1| peptide chain release factor 2 [Bacillus subtilis MB73/2]
gi|320019349|gb|ADV94335.1| peptide chain release factor 2 [Bacillus subtilis BSn5]
gi|349596385|gb|AEP92572.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|351472312|gb|EHA32425.1| peptide chain release factor 2 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|407962365|dbj|BAM55605.1| peptide chain release factor 2 [Bacillus subtilis BEST7613]
gi|407966379|dbj|BAM59618.1| peptide chain release factor 2 [Bacillus subtilis BEST7003]
gi|449029892|gb|AGE65131.1| peptide chain release factor [Bacillus subtilis XF-1]
gi|452117376|gb|EME07770.1| peptide chain release factor 2 [Bacillus subtilis MB73/2]
Length = 327
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ +AQ + +KD +N ++ L +E TD L E
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQL--EL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RWGE++
Sbjct: 60 EKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|379705646|ref|YP_005204105.1| peptide chain release factor 2 [Streptococcus infantarius subsp.
infantarius CJ18]
gi|374682345|gb|AEZ62634.1| peptide chain release factor 2 [Streptococcus infantarius subsp.
infantarius CJ18]
Length = 336
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 223/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L +K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS A L E +++L+K + +E+T LLS PYD+ A++ I G+GGT+AQDWADM
Sbjct: 61 DDSIQAELEE----TLEKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + +K ++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LFRMYTRYGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSFS EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFSSVEVMPEL-DDTVEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDILKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG+++ FI ++LK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIDGFIDAFLKWR 334
>gi|210620542|ref|ZP_03292090.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
gi|210155256|gb|EEA86262.1| hypothetical protein CLOHIR_00033 [Clostridium hiranonis DSM 13275]
Length = 349
Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 223/343 (65%), Gaps = 4/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+++L++++ E E FW++ A + LQ + + + + ++D +++L
Sbjct: 6 IERLKEKIIENEQDMERQDFWEDNENAHKVLQENKKLCETVEKFEQLQKNLEDIEVLIEL 65
Query: 87 -TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
EE DS D + +E + I +L +D+ + LLSG YDK A++SI AG GG DAQD
Sbjct: 66 GLEEDDSED--IEKEVSDSINQLKDVIDEMTIQTLLSGEYDKNNAIVSINAGTGGLDAQD 123
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
WA MLLRMY+RW E + YK ++++ EAGIK+AV+ ++G AYGYL GEKG HRIVR
Sbjct: 124 WAQMLLRMYIRWAEGRDYKVKLLDLISDPEAGIKTAVMLIQGDNAYGYLKGEKGVHRIVR 183
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+ G R TSF+ +V+P L +E+++V+I + DL+I RA G GGQ+VN ++AVR
Sbjct: 184 ISPFDPSGKRHTSFASVDVIPEL-DENIEVEINQSDLKIDTYRASGAGGQHVNTTDSAVR 242
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITH+PTG+TV+C ERSQ N+ A+ L AKL+ I E ++ +I+ ++G + WG Q
Sbjct: 243 ITHLPTGITVQCQNERSQHLNREVAMRMLMAKLIDIKEMEQKEKIEDLQGKYTQITWGSQ 302
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
IR+YVF PYK+VKD RT ET ++ +VM+G ++ FI SYL K
Sbjct: 303 IRSYVFQPYKMVKDHRTNTETGNVDAVMNGNIDIFINSYLTRK 345
>gi|383938432|ref|ZP_09991643.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
SK674]
gi|383714641|gb|EID70636.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
SK674]
Length = 329
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 218/334 (65%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ A EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQLA----ELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|25010633|ref|NP_735028.1| peptide chain release factor 2 [Streptococcus agalactiae NEM316]
gi|339301957|ref|ZP_08651031.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
13813]
gi|406709049|ref|YP_006763775.1| peptide chain release factor 2 [Streptococcus agalactiae
GD201008-001]
gi|417004735|ref|ZP_11943374.1| peptide chain release factor 2 [Streptococcus agalactiae FSL
S3-026]
gi|421147673|ref|ZP_15607358.1| peptide chain release factor 2 [Streptococcus agalactiae GB00112]
gi|424049883|ref|ZP_17787434.1| peptide chain release factor 2 [Streptococcus agalactiae ZQ0910]
gi|23094987|emb|CAD46208.1| Unknown [Streptococcus agalactiae NEM316]
gi|319744591|gb|EFV96943.1| peptide chain release factor RF2 [Streptococcus agalactiae ATCC
13813]
gi|341577717|gb|EGS28124.1| peptide chain release factor 2 [Streptococcus agalactiae FSL
S3-026]
gi|389648606|gb|EIM70103.1| peptide chain release factor 2 [Streptococcus agalactiae ZQ0910]
gi|401685793|gb|EJS81788.1| peptide chain release factor 2 [Streptococcus agalactiae GB00112]
gi|406649934|gb|AFS45335.1| peptide chain release factor 2 [Streptococcus agalactiae
GD201008-001]
Length = 337
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 222/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
>gi|387792497|ref|YP_006257562.1| peptide chain release factor 2 [Solitalea canadensis DSM 3403]
gi|379655330|gb|AFD08386.1| peptide chain release factor 2 [Solitalea canadensis DSM 3403]
Length = 358
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 215/350 (61%), Gaps = 5/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
DR+ +R + E+A + + +FWD+ A++ L + K + T
Sbjct: 11 DRIASLRRHLDIDNKLNEIASEQEQTLAPTFWDDAKAAEKILHNIKSKKVWTDEFAIVNT 70
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+D + +E D ++ + ++ + IK +++ E +LSG D+ AV+ I
Sbjct: 71 SAEDTYVLFDFYKEGDVSEMEMQQQFDTTIK----VVEELEFKNMLSGEEDQLNAVLKIN 126
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGGT++ DWA+ML+RMY+ WGEK YK + ++ G+ AGI + +E EG + YGYL
Sbjct: 127 AGAGGTESCDWAEMLMRMYIMWGEKHGYKVKEIDYQPGDVAGITTCTLEFEGDFTYGYLK 186
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
GE G HR+VR SPF++ R TSF+ V PL+ ++S+ V+I D+ RAGGKGGQ
Sbjct: 187 GESGVHRLVRISPFDSNAKRHTSFASVYVYPLV-DDSISVEINPADVSWDTFRAGGKGGQ 245
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NVNKVETAVR+ H P+G+ + C +ERSQL NK KAL LK++L + +R + G
Sbjct: 246 NVNKVETAVRLKHAPSGIIIECQQERSQLQNKEKALKMLKSQLYELELRKRNEAKAAVEG 305
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
K EWG QIRNYVFHPYKLVKD+RTG ETS++ +VMDGEL+ FIK+YL
Sbjct: 306 TKKKIEWGSQIRNYVFHPYKLVKDLRTGEETSNVQAVMDGELDDFIKAYL 355
>gi|383820469|ref|ZP_09975725.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
gi|383334859|gb|EID13292.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
Length = 368
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 229/346 (66%), Gaps = 4/346 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L + +LE +A+D + WD++A AQ+ L+ + ++ + D + ++DD + +L
Sbjct: 25 VEGLRGRIEKLEHEASDPNLWDDQARAQKVTSDLSHAQGELRRVEDLRRRLDDLPVLYEL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D L EA + +K+L + ++ E+ LLSG YD+ AV++I +GAGG DA DW
Sbjct: 85 AAEEGGADE--LAEADAELKKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADW 142
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW EK Y V++ S EEAGIKSA V +AYG LS E+GTHR+VR
Sbjct: 143 AEMLMRMYIRWAEKHNYSVEVLDTSYAEEAGIKSATFVVHAPFAYGTLSVEQGTHRLVRI 202
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ + RQTSF+ EV+P++ E + + IPE D+ + R+ G GGQ+VN ++AVR+
Sbjct: 203 SPFDNQSRRQTSFADVEVLPVV-ETTDHIDIPETDVRVDVYRSSGPGGQSVNTTDSAVRL 261
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQL NK+ A+ L+AKLL ++ +E+ ++GD + WG Q+
Sbjct: 262 THIPTGIVVTCQNEKSQLQNKMSAMRVLQAKLLERKRQEERAEMDALKGDG-GSSWGNQM 320
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
R+YV HPY++VKD+RT +E + +V+DG+++ F+++ ++++ S S
Sbjct: 321 RSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWRKSQS 366
>gi|239917286|ref|YP_002956844.1| peptide chain release factor 2 [Micrococcus luteus NCTC 2665]
gi|239838493|gb|ACS30290.1| bacterial peptide chain release factor 2 (bRF-2) [Micrococcus
luteus NCTC 2665]
Length = 373
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 236/348 (67%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I + L +++ ++AELE +A+ WD+ EAQ+ L+ + + +T +++++D
Sbjct: 20 IEQVSDLDRIKADIAELEQQASAPDLWDDPEEAQKVTSKLSHRQTDLKRITSLESRIEDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
T+V+L E D + LL++A + + KAL++ E+ LLSG YD+ AV++I AGAGG
Sbjct: 80 ETMVELAAEED--EPSLLDDANQELTSIRKALEELEVVTLLSGEYDQRDAVVTIRAGAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ L+RMY+RW E++ + T+V++ S EEAG+KS EV +A+G LS E GT
Sbjct: 138 VDAADFAETLMRMYLRWAEQRGWSTKVMDTSYAEEAGLKSVTFEVNAPFAFGTLSVEAGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E ++IPE ++++ R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVVPLI-ESDDSIEIPESEIKVDVFRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+TH+PTG+ V E+SQ+ N+ AL L+++LL++ + + ++ K++ GD VKA
Sbjct: 257 DSAVRMTHLPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRKAEEDAKKKEMAGD-VKA 315
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV +PY++VKD+RTGHE + SV DG ++ F+ + ++++
Sbjct: 316 SWGDQMRSYVLNPYQMVKDLRTGHEEGNPSSVFDGHIDDFVDAGIRWR 363
>gi|73748409|ref|YP_307648.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
gi|452203414|ref|YP_007483547.1| peptide chain release factor 2 [Dehalococcoides mccartyi DCMB5]
gi|452204850|ref|YP_007484979.1| peptide chain release factor 2 [Dehalococcoides mccartyi BTF08]
gi|73660125|emb|CAI82732.1| peptide chain release factor 2 [Dehalococcoides sp. CBDB1]
gi|452110473|gb|AGG06205.1| peptide chain release factor 2 [Dehalococcoides mccartyi DCMB5]
gi|452111906|gb|AGG07637.1| peptide chain release factor 2 [Dehalococcoides mccartyi BTF08]
Length = 356
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 215/336 (63%), Gaps = 5/336 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +++ FW ++ AQ+ ++ L K L + +++D + L+ E
Sbjct: 20 ELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELAVLSRE- 78
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L E I L LD E+ SG YD A++++ AGAGG ++QDWA ML
Sbjct: 79 ---DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDWAGML 135
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRM++RW EK+ + ++++SLGEEAGIKSA +++EG YAYG+L E G HR++R SPF+
Sbjct: 136 LRMFMRWAEKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFD 195
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSF+ E+MP E+S+D+ I ED++I R+ G GGQNV KV TAVR+THIP
Sbjct: 196 ADHARHTSFALVEIMPE-AEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIP 254
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
+G+ V ERSQ N+ A+ L +KLL + +RA E +++G+ + AEWG QIR+YV
Sbjct: 255 SGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIRSYV 314
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
HPYK+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 315 LHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 350
>gi|398305006|ref|ZP_10508592.1| peptide chain release factor 2 [Bacillus vallismortis DV1-F-3]
Length = 327
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D FW+++ +AQ + +KD +N ++ L +E TD L E
Sbjct: 2 SDPEFWNDQQKAQTVINEANGIKDYVNSYKKLSESHEELQMTHDLLKEEPDTDLQL--EL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RWGE++
Sbjct: 60 EKELKSLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|357235903|ref|ZP_09123246.1| peptide chain release factor 2 [Streptococcus criceti HS-6]
gi|356883885|gb|EHI74085.1| peptide chain release factor 2 [Streptococcus criceti HS-6]
Length = 326
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K + +M++ +L EM DA + E+ +
Sbjct: 6 FWDDNVAAQKTSQELNELKQTYDTFN----QMEELSEETELYLEMLEEDASVQEDLEDTL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AKLDKMMASYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG +AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L ++++DV I +ED+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIDVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RTG+E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAEEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDG+++ FI +YLK++
Sbjct: 301 VAQVDKVMDGDIDGFIDAYLKWR 323
>gi|403508387|ref|YP_006640025.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
gi|402801847|gb|AFR09257.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
Length = 370
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 225/350 (64%), Gaps = 4/350 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+ A L+ ++ ++AEL ++AD W ++ AQ+ + L+ ++ +N + ++DD
Sbjct: 20 VTAVLDLEAMQTQIAELREQSADPELWADQDNAQKVTRRLSTLESMVNKVGGIGRRLDDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+ +L E D D EA +++L K + + E+ LL+GP+D+ A+++I + AGG
Sbjct: 80 GVLYELAEAEDDPDT--RAEADRELEQLRKEIGELEVRTLLNGPHDEREAIVTINSQAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA DWA ML RMY+RW E+ + T + E S EEAGIKS V+ +AYG L GE GT
Sbjct: 138 VDAADWAQMLQRMYLRWAERHGHPTEIYETSYAEEAGIKSTSFAVKSAFAYGTLRGEHGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ + RQTSF+G +V+P++ E+S ++I E +L + R+ G GGQ VN
Sbjct: 198 HRLVRISPFDNQNRRQTSFAGVDVVPMV-EQSDHIEIDETELRVDVYRSSGPGGQGVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVRITH+PTG+ V C ERSQL NK A+S L+AKLL ++ + + ++RGD+V +
Sbjct: 257 DSAVRITHMPTGIVVSCQNERSQLQNKATAMSMLQAKLLARKRQEEQAALDELRGDSVSS 316
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG Q+RNYV HPY+ VKDVRTG ET + V+DG+++ FI + +++ S
Sbjct: 317 -WGTQMRNYVLHPYQSVKDVRTGMETGNTSGVLDGDIDGFIDAEIRWMRS 365
>gi|428281124|ref|YP_005562859.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
BEST195]
gi|291486081|dbj|BAI87156.1| hypothetical protein BSNT_05369 [Bacillus subtilis subsp. natto
BEST195]
Length = 327
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ +AQ + +KD +N ++ L +E TD L E
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVNSYKKLNESHEELQMTHDLLKEEPDTDLQL--EL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RWGE++
Sbjct: 60 EKELKSLTKDFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWGERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNDE-IDIDIRAEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|417849938|ref|ZP_12495853.1| peptide chain release factor 2 [Streptococcus mitis SK1080]
gi|339455271|gb|EGP67878.1| peptide chain release factor 2 [Streptococcus mitis SK1080]
Length = 329
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ EE + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VQEELVAQLAELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
Length = 377
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 147/348 (42%), Positives = 223/348 (64%), Gaps = 6/348 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L +L ELE K+AD S WD+ AQ+ L+ V+ K+ + + ++DD + +
Sbjct: 25 LDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGLRQRLDDLPVLYDM 84
Query: 87 TEEMDSTDAGLLEEAASII----KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTD 142
EE D +EA + +EL + ++ E+T +LSG YD+ AV++I + AGG D
Sbjct: 85 AEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDEREAVLNIRSAAGGVD 144
Query: 143 AQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHR 202
A DWA+MLLRMY RW EK +K V + S EEAGIKSA I + G Y YG LS E+GTHR
Sbjct: 145 AADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEYMYGTLSVEQGTHR 204
Query: 203 IVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVET 262
+VR SPF+ +G RQTSF+ EV+P++ E++ + I E D+ + R+ G GGQ+VN ++
Sbjct: 205 LVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIDENDVRVDVYRSSGPGGQSVNTTDS 263
Query: 263 AVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEW 322
AVR+TH+PTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ ++GD + W
Sbjct: 264 AVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAEMDALKGDGSNS-W 322
Query: 323 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
G Q+RNYV HPY++VKD+RT E +D V+DG+L+ F+++ ++++ +
Sbjct: 323 GNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFLEAGIRWRMA 370
>gi|408678448|ref|YP_006878275.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
Length = 367
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 158/366 (43%), Positives = 237/366 (64%), Gaps = 11/366 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S + I A L++L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMGSIEAVLDLEKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L EEMD D L EA + + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAETLRGRIDDLAVLFELAEEMDDPDT--LAEAEAELTSVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A+++I A AGG DA D+A+ L RMY+RW E+ Y T V E S EEAGIKS V
Sbjct: 123 DEREALVNIRAEAGGVDASDFAERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E S V+I E +L +
Sbjct: 183 KAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-ESSDHVEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ VN ++AVRITH+PTG+ V C ERSQ+ NK A++ L+AKLL E Q
Sbjct: 242 VYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKLL---ERQ 298
Query: 306 RASEIKQIRGDAVK---AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
R E ++ DA+K + WG Q+R+YV HPY++VKD+RT E + SV+DGE++ F++
Sbjct: 299 RQEERAKM--DALKDSGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLE 356
Query: 363 SYLKYK 368
+ ++++
Sbjct: 357 AGIRWR 362
>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
defluvii]
Length = 377
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 222/344 (64%), Gaps = 3/344 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L ++ EL ++E+K + FW + A + + + +++ D + + +D +++L
Sbjct: 22 LARMTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQNDIEALLEL 81
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
++S DAGL +E + ++ KA+ QF + LLSG D A+ +I GAGGT++QDW
Sbjct: 82 A--LESGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGTESQDW 139
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A MLLRMYVRW E++ +K ++ G+EAGIKSA + V G YAYGYL E G HR+VR
Sbjct: 140 AQMLLRMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVHRLVRI 199
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+A R TSF+ V P L E+ + V I ++DL + RAGG GGQNVNKVETA+RI
Sbjct: 200 SPFDANKRRHTSFASVFVYPEL-EDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVETAIRI 258
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V+C ERSQL N+ A+ LKA+L + + ++ +E I G+ WG QI
Sbjct: 259 THIPTGIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEKKDIAWGSQI 318
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
R+YVF PY++VKD RTG+E + +VMDGEL+ FI++YL+ K +
Sbjct: 319 RSYVFQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYLQRKLT 362
>gi|84494447|ref|ZP_00993566.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
gi|84383940|gb|EAP99820.1| peptide chain release factor 2 [Janibacter sp. HTCC2649]
Length = 370
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 232/350 (66%), Gaps = 4/350 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R L LE +A+LE + A WD++ +AQ L+ K + + +T TK+DD
Sbjct: 19 VRDVTDLTALEATIADLEEQVAAPDLWDDQEKAQAVTSLLSRAKAEYDRVTGMDTKVDDL 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V++ +E DA L EA +K + KA+ + E+ LLSG +D+ AV++I AGAGG
Sbjct: 79 EALVEMGQE--ENDAETLLEAEKELKIVKKAVGELEVRTLLSGEWDERSAVVTIRAGAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ML+RMY+RW E+ Y T+V++ S EEAGIKSA EV YA+G LS E GT
Sbjct: 137 VDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGIKSATFEVNVPYAFGNLSVEGGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF EV+PL+ E + ++IPE DL+I R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFVAVEVIPLI-EGTDSIEIPENDLKIDVFRSSGPGGQSVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG V E+SQ+ N+ AL ++++LL++ + A+ K++ GD VKA
Sbjct: 256 DSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLLKRAEEAAVKKEMAGD-VKA 314
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG Q+R+YV +PY++VKD+RT ET + +V DG+++ FI++ ++++ +
Sbjct: 315 SWGDQMRSYVLNPYQMVKDLRTEFETGNPTAVFDGDIDGFIEAGIRWQIA 364
>gi|418977881|ref|ZP_13525688.1| peptide chain release factor 2 [Streptococcus mitis SK575]
gi|383349082|gb|EID27032.1| peptide chain release factor 2 [Streptococcus mitis SK575]
Length = 329
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 216/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ EE + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHEELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNTKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|334139368|ref|ZP_08512760.1| peptide chain release factor 2 [Paenibacillus sp. HGF7]
gi|333602181|gb|EGL13612.1| peptide chain release factor 2 [Paenibacillus sp. HGF7]
Length = 333
Score = 296 bits (759), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 144/328 (43%), Positives = 213/328 (64%), Gaps = 3/328 (0%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
MK A FWD+ +AQ+ + L +K ++ + +D + +L +E D +
Sbjct: 1 MKMAAPDFWDDNEKAQKIIGELNAIKSVVDQFQALNNEYEDLDVMAQLADE--ENDEDMA 58
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E A +K + + L+ F+L LL+ PYD+ A++ + GAGGT++QDWA+MLLRMY RW
Sbjct: 59 AELADGLKGVLRKLEDFQLQLLLNQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWA 118
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ +K V++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 119 EKRDFKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTS 178
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +V+P + E+ ++V I EDL+I RA G GGQ++N ++AVRITH+PTGV V C
Sbjct: 179 FVSCDVVPEI-EDDVEVDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQ 237
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A+ L++KL E++ + +IRG+ WG QIR+YVFHPY +VK
Sbjct: 238 TERSQIKNRERAMKHLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVK 297
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RT ET ++ +VMDG+L+PFI +YL+
Sbjct: 298 DHRTTEETGNVGAVMDGDLDPFIDAYLR 325
>gi|19745741|ref|NP_606877.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS8232]
gi|50913897|ref|YP_059869.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10394]
gi|71903175|ref|YP_279978.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS6180]
gi|94988152|ref|YP_596253.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS9429]
gi|94992039|ref|YP_600138.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS2096]
gi|94993945|ref|YP_602043.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS10750]
gi|306827732|ref|ZP_07461004.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
10782]
gi|383479712|ref|YP_005388606.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS15252]
gi|383493632|ref|YP_005411308.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS1882]
gi|386362389|ref|YP_006071720.1| peptide chain release factor 2 [Streptococcus pyogenes Alab49]
gi|417857260|ref|ZP_12502319.1| peptide chain release factor 2 [Streptococcus pyogenes HKU
QMH11M0907901]
gi|19747880|gb|AAL97376.1| putative peptide chain release factor 2 [Streptococcus pyogenes
MGAS8232]
gi|50902971|gb|AAT86686.1| Bacterial Peptide Chain Release Factor 2 [Streptococcus pyogenes
MGAS10394]
gi|71802270|gb|AAX71623.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
MGAS6180]
gi|94541660|gb|ABF31709.1| bacterial peptide chain release factor 2 (RF-2) [Streptococcus
pyogenes MGAS9429]
gi|94543542|gb|ABF33590.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
pyogenes MGAS10270]
gi|94545547|gb|ABF35594.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
pyogenes MGAS2096]
gi|94547453|gb|ABF37499.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
pyogenes MGAS10750]
gi|304430050|gb|EFM33087.1| peptide chain release factor RF2 [Streptococcus pyogenes ATCC
10782]
gi|350276798|gb|AEQ24166.1| peptide chain release factor 2 [Streptococcus pyogenes Alab49]
gi|378927702|gb|AFC65908.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS15252]
gi|378929360|gb|AFC67777.1| peptide chain release factor protein (2) PrfB [Streptococcus
pyogenes MGAS1882]
gi|387934215|gb|EIK42328.1| peptide chain release factor 2 [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 337
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 221/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
>gi|300913271|ref|ZP_07130588.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
gi|300889956|gb|EFK85101.1| hypothetical protein Teth561_PD0069 [Thermoanaerobacter sp. X561]
Length = 368
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 233/358 (65%), Gaps = 6/358 (1%)
Query: 14 ASDRVEEIRASAGLQQLE---KELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
S+ +EEI+ L +E +E+ E++ K +D +FW + ++QE + +K+ +
Sbjct: 9 VSNMIEEIKKWGFLFDIESVKREIEEIDKKMSDPAFWSDIKKSQELAKKQKALKELLEEY 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+K +D T+++L ++ D + +E KEL K L+ ++ LL+G YDK A
Sbjct: 69 NSLVSKWEDLSTLIELG--LEEGDESITDEVDKEYKELKKKLEDLKIKTLLNGLYDKNNA 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++SI AG+GGT+AQDWA+MLLRMY RW + ++ ++ GEEAGIKS + ++G +A
Sbjct: 127 ILSIHAGSGGTEAQDWAEMLLRMYTRWANDKGFEVETLDYLQGEEAGIKSVTLMIKGPFA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL E G HR+VR SPF+A G R TSF+ EV+P L E ++V+I EDL+I RA
Sbjct: 187 YGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEL-ENDIEVEIRPEDLKIDTYRAS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKAKLL + +++ +I
Sbjct: 246 GAGGQYVNKTESAVRITHLPTGIVVSCQSERSQIQNRETAMKMLKAKLLDLMMKEKKEKI 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ ++G+ +A WG QIR+YVF PY LVKD RT +E ++ +VMDGE++ FI +YLK K
Sbjct: 306 EDLKGEHREAAWGNQIRSYVFQPYTLVKDHRTNYEVGNVQAVMDGEIDGFINAYLKQK 363
>gi|256390605|ref|YP_003112169.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
gi|256356831|gb|ACU70328.1| peptide chain release factor 2 [Catenulispora acidiphila DSM 44928]
Length = 368
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 232/352 (65%), Gaps = 12/352 (3%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L +L ++A+LE +A+ WD++A+AQ L+ ++ ++N + +++D
Sbjct: 19 IEAVLDLGKLRAQIADLEEQASAPDLWDDQAKAQAVTSKLSGLQAELNRFSTLNRRLEDI 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+ +L + DA L E + +++KA+ + E+ LLSG YD A++++ A AGG
Sbjct: 79 EVLFELGQSEGDEDA--LAEVQGELVDVSKAVGELEVRTLLSGEYDAREALVTLRAEAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+MLLRMY RW E+ Y+ V + S EEAGIKSA + V+ YAYG LS E+GT
Sbjct: 137 VDAADFAEMLLRMYTRWAERHNYQYEVYDTSYAEEAGIKSATLTVKAPYAYGTLSVEQGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G EV+P++ E+S V IPE++L + R+ G GGQ VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAGVEVVPVV-EQSDHVDIPEDELRVDVYRSSGPGGQGVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK- 319
++AVRITH+P+G+ V C ERSQ+ N+ A++ L+AKLL QR E +Q + DA+K
Sbjct: 256 DSAVRITHLPSGIVVSCQNERSQIQNRASAMAVLQAKLL-----QRRREEEQAKMDALKD 310
Query: 320 ---AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV HPY+LVKD+RT +ET + +V+DG+++ FI++ ++++
Sbjct: 311 DSSGSWGNQMRSYVLHPYQLVKDLRTNYETGNTTAVLDGDIDEFIEAGIRWR 362
>gi|407452946|ref|YP_006724671.1| protein release subunit factor B [Riemerella anatipestifer RA-CH-1]
gi|403313930|gb|AFR36771.1| Protein chain release factor B [Riemerella anatipestifer RA-CH-1]
Length = 376
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 220/355 (61%), Gaps = 5/355 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V+ + RV ++ + + + E+ + K A FWDN EA+ L+ L K +
Sbjct: 13 VKNINQRVSDLHKYLQIDKKKLEITNDDEKTAAPEFWDNPKEAEVFLKQLRSKKKWVEDY 72
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ T ++D +++ +E D A LE A + E ++ E +LS D+ A
Sbjct: 73 EEIHTGLEDLQVLLEFAKE-DPDSAQELETAYPTLLE---KVENLEFKNMLSNEGDELSA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
V+ ITAGAGGT++ DWA ML+RMY+ W +K YK + + G+ AG+K+ +E+EG YA
Sbjct: 129 VLQITAGAGGTESCDWASMLMRMYLMWADKNGYKVKELNFQEGDVAGVKTVTLEIEGEYA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
+GYL GE G HR+VR SPF++ R TSF+ V PL+ ++S+++ I D+ RA
Sbjct: 189 FGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLV-DDSIEININPADISFETMRAS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQNVNKVETAVR+ H PTG+ + +E RSQL NK KAL LK++L I E+R
Sbjct: 248 GAGGQNVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKALQLLKSRLYEIELEERMKAR 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+I + +K EWG QIRNYV HPYKLVKDVR+GHETSD+ +VM+GE+ PF+K+YL
Sbjct: 308 NEIEANKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGEITPFLKAYL 362
>gi|310287040|ref|YP_003938298.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
bifidum S17]
gi|311063912|ref|YP_003970637.1| peptide chain release factor 2 (RF-2) PrfB [Bifidobacterium bifidum
PRL2010]
gi|313139738|ref|ZP_07801931.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
41171]
gi|390936387|ref|YP_006393946.1| peptide chain release factor [Bifidobacterium bifidum BGN4]
gi|421733301|ref|ZP_16172411.1| peptide chain release factor 2 [Bifidobacterium bifidum LMG 13195]
gi|421736387|ref|ZP_16175201.1| peptide chain release factor 2 [Bifidobacterium bifidum IPLA 20015]
gi|309250976|gb|ADO52724.1| peptide chain release factor 2 with RF-1 domain [Bifidobacterium
bifidum S17]
gi|310866231|gb|ADP35600.1| PrfB Bacterial Peptide Chain Release Factor 2 (RF-2)
[Bifidobacterium bifidum PRL2010]
gi|313132248|gb|EFR49865.1| peptide chain release factor 2 [Bifidobacterium bifidum NCIMB
41171]
gi|389890000|gb|AFL04067.1| peptide chain release factor [Bifidobacterium bifidum BGN4]
gi|407078815|gb|EKE51611.1| peptide chain release factor 2 [Bifidobacterium bifidum LMG 13195]
gi|407296325|gb|EKF15893.1| peptide chain release factor 2 [Bifidobacterium bifidum IPLA 20015]
Length = 375
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 240/365 (65%), Gaps = 4/365 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
++ + + A + E I + +++L+ ++A LE +AA WD+ AQ+ L+ +
Sbjct: 4 FDFSQAIGEARSKYESIAKALDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLSAAQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
++ L + +++D T+V+L +E DA L EA S I + + LD E+ LL G
Sbjct: 64 AQLKRLNEANRRIEDVETLVELAQE--EADADSLSEAQSEIGSIAQELDDMEIQTLLDGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA D+A MLLRMY+R+ E+ +K +V++ S EEAGIKSA +
Sbjct: 122 YDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATFQ 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ +
Sbjct: 182 VDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLV-EATDHIDIPDTDIRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
+ G GGQ VN +AVRITH+PTG+ V +ERSQ+ N+ A++ L+++LLV+ E
Sbjct: 241 DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A + K++ GD +KA WG Q+R+YV HPY++VKD+RTG ETS +V DG+++ FI++
Sbjct: 301 EEAKKKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAG 359
Query: 365 LKYKY 369
+++++
Sbjct: 360 IRWRH 364
>gi|256832101|ref|YP_003160828.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
gi|256685632|gb|ACV08525.1| peptide chain release factor 2 [Jonesia denitrificans DSM 20603]
Length = 369
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 232/350 (66%), Gaps = 4/350 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + + L ++AEL +A+ WD+ A+AQ+ AL+ ++++ + + ++DD
Sbjct: 19 ISAVSDPEALTAKIAELSDQASAPDLWDDPAQAQQVTSALSLAQNELKRIESMQQRIDDL 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V++ ++ DA L EA + K LDQ E+ LLSG YD AV++I AGAGG
Sbjct: 79 EVLVEMA--VEGNDADTLHEAEDEYAAIKKDLDQLEVRTLLSGEYDAREAVVTIRAGAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+MLLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E GT
Sbjct: 137 VDAADFAEMLLRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E++ V+IP+ ++ + R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDHVEIPDNEIRVDVFRSSGPGGQSVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG+ V E+SQ+ N+ A+ L+++LL+ + + ++ K++ GD +KA
Sbjct: 256 DSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLERQAEEKAKKKELAGD-IKA 314
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
WG Q+R+YV PY++VKD+RT HE + +V DG ++ FI++ ++++ S
Sbjct: 315 SWGDQMRSYVLQPYQMVKDLRTEHEVGNTNAVFDGHIDDFIEAGIRWRRS 364
>gi|255029564|ref|ZP_05301515.1| peptide chain release factor 2 [Listeria monocytogenes LO28]
Length = 366
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 226/360 (62%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGLFDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L EE IK + FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQEELEKDIKAYMATISAFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L + +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DGDIEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 362
>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
Length = 370
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 226/362 (62%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++ +E ++ I+ + L EL +L+ + FW++ +AQE + +K
Sbjct: 5 FKEKLEQLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIANK 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I + + K++D ++L E D +E I+ L+K + + E LLS YD
Sbjct: 65 IQEIESVEKKINDIKEFIELLEL--EYDKETEDEIKREIEALDKEITKLETASLLSEEYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A++++ AG+GG +A DW +MLLRMY+RW EK + +V+ + AGIKSA V+
Sbjct: 123 MKNAIVTLQAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVK 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGYL GE+G HR+VR SPF+A R TSFS V+P + +E + V+I EEDL I
Sbjct: 183 GPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGDE-VKVEIKEEDLRIDT 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VN ++AVRI HIPTG+TV C ERSQ+ N+ KAL LKAKL E++
Sbjct: 242 FRASGAGGQHVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQ 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+ K++ G+ WG QIR+YVF PY++VKD+RTG+ET +I +VMDG+++PFI+SYLK
Sbjct: 302 KEKQKELEGEKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYLK 361
Query: 367 YK 368
++
Sbjct: 362 WR 363
>gi|373855714|ref|ZP_09598460.1| peptide chain release factor 2 [Bacillus sp. 1NLA3E]
gi|372454783|gb|EHP28248.1| peptide chain release factor 2 [Bacillus sp. 1NLA3E]
Length = 327
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 209/324 (64%), Gaps = 3/324 (0%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD++ +AQ + +KD++++ D ++ +L +E DA L + S
Sbjct: 5 NFWDDQQQAQTVISESNALKDQVHVFHDLYETYENLELTFELIKE--EPDAELQSDLESE 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
+ E L +FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+ +K
Sbjct: 63 LLEFTDRLSKFELELLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFK 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF EV
Sbjct: 123 VETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEV 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP +E ++V I EDL+I RA G GGQ++N ++AVRITH PTGV V C ERSQ+
Sbjct: 183 MPEFNDE-IEVDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHAPTGVVVTCQNERSQI 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
N+ +A+ LKAKL + E++ +++ +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 242 KNREQAMKMLKAKLYQLKIEEQEAQLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTST 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKYK 368
E+ ++ +VMDG++ FI +YL+ K
Sbjct: 302 ESGNVQAVMDGDINMFIDAYLRSK 325
>gi|254555779|ref|YP_003062196.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
gi|300767562|ref|ZP_07077472.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308179754|ref|YP_003923882.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|448820326|ref|YP_007413488.1| Peptide chain release factor 2 [Lactobacillus plantarum ZJ316]
gi|254044706|gb|ACT61499.1| peptide chain release factor 2 [Lactobacillus plantarum JDM1]
gi|300494547|gb|EFK29705.1| peptide chain release factor RF2 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308045245|gb|ADN97788.1| peptide chain release factor 2 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|448273823|gb|AGE38342.1| Peptide chain release factor 2 [Lactobacillus plantarum ZJ316]
Length = 357
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/343 (45%), Positives = 215/343 (62%), Gaps = 5/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L L + + E E + A+ FWD++A AQ+ + +K K + ++ D AV
Sbjct: 12 LDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGDLAVAYEL 71
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
L+EE DA + E + + L Q+ L LL GPYD+ A++ I GAGGT++QD
Sbjct: 72 LSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGTESQD 128
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
W MLLRMY RW +K V+ G+EAGIKS + + G AYGYL EKG HR+VR
Sbjct: 129 WGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVHRLVR 188
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+A G R TSF+ +VMP L ++++DV I EDL+I RA G GGQ+VNK +AVR
Sbjct: 189 ISPFDAAGRRHTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSSAVR 247
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITH+PTG+ V +RSQL N+ AL+ L+AKL EE++A E I+G+ + WG Q
Sbjct: 248 ITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQ 307
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
IR+YVFHPY +VKD RT +E+ D +VMDG+L+PF+ +YL++K
Sbjct: 308 IRSYVFHPYTMVKDHRTNYESHDGQAVMDGDLDPFMDAYLQWK 350
>gi|365156912|ref|ZP_09353199.1| peptide chain release factor 2 [Bacillus smithii 7_3_47FAA]
gi|363626379|gb|EHL77369.1| peptide chain release factor 2 [Bacillus smithii 7_3_47FAA]
Length = 327
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 210/321 (65%), Gaps = 3/321 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW+++ +AQ + +KD +N D ++ L +E + T+ L E S +
Sbjct: 6 FWNDQQKAQAIINEANGLKDLVNEYKDLLETQENLDLTYDLVKEENDTE--LKAELESEL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++ K L+++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+ YK
Sbjct: 64 EDFTKRLNRYELELLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGYKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF +VM
Sbjct: 124 ETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P EE ++++I EDL+I R+ G GGQ+VN ++AVRITH+PTG+ V C ERSQ+
Sbjct: 184 PEFNEE-VEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A++ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT E
Sbjct: 243 NRERAMNMLKAKLYQKKLEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTE 302
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
T ++ +VMDGE++ FI +YL+
Sbjct: 303 TGNVQAVMDGEIDMFIDAYLR 323
>gi|417793933|ref|ZP_12441199.1| peptide chain release factor 2 [Streptococcus oralis SK255]
gi|334271653|gb|EGL90038.1| peptide chain release factor 2 [Streptococcus oralis SK255]
Length = 329
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|168185950|ref|ZP_02620585.1| peptide chain release factor 2 [Clostridium botulinum C str.
Eklund]
gi|169295927|gb|EDS78060.1| peptide chain release factor 2 [Clostridium botulinum C str.
Eklund]
Length = 326
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/325 (47%), Positives = 221/325 (68%), Gaps = 3/325 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+S FWD+ +AQE Q +KD+I+ + KT+++D +++++ E + + +EE
Sbjct: 3 ESDFWDDINKAQEITQEAKGLKDRIDGYNNTKTRIEDLEVLIEISIEEEDESS--IEEIL 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+ IKE+ +D F++ LLSG YDK A++S+ +GAGGTDAQDW +MLLRMY RW EK+
Sbjct: 61 NEIKEIEIIIDDFKVQILLSGEYDKNNAIVSLHSGAGGTDAQDWTEMLLRMYTRWAEKKG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
YK ++ G+EAGIKSA +++ G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 121 YKVDTIDILPGDEAGIKSASLKITGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASL 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EV+P L E+ D++I +DL + RA G GGQ++NK ++AVRITHIPTG+ V+ ERS
Sbjct: 181 EVIPEL-RENQDIEIKADDLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQSQSERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK A+S LK+KL+ + E +I+ + GD + WG QIR+YVF PY +VKD RT
Sbjct: 240 QFQNKDTAMSMLKSKLIELKERAHKEKIEDLSGDLKEIGWGSQIRSYVFQPYTMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLKY 367
E ++ +VMDG+++ FI YLK+
Sbjct: 300 NTEMGNVDAVMDGDIDNFILQYLKF 324
>gi|401684570|ref|ZP_10816446.1| peptide chain release factor 2 [Streptococcus sp. BS35b]
gi|400184840|gb|EJO19076.1| peptide chain release factor 2 [Streptococcus sp. BS35b]
Length = 329
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMTNYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQERKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|261367680|ref|ZP_05980563.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
15176]
gi|282570473|gb|EFB76008.1| peptide chain release factor 2 [Subdoligranulum variabile DSM
15176]
Length = 373
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 222/349 (63%), Gaps = 3/349 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
V+++R + ++ EK LAELE + F+D++ ++Q + + +VK+K+ T+
Sbjct: 18 VDDLRDALSIEASEKRLAELEHQMTLPGFYDDQEKSQRVISEMGEVKNKLERFGKLSTQY 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
++A T++++ EE D L E ++ + KA+D+ +L +L+G YD A+++ AG
Sbjct: 78 EEAETLLEMIEE--ENDPSLASEGEQAVEGVEKAIDELQLMTMLNGEYDHNNAILTFHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
GGT+AQDWA+ML RMY RW E Y V++ G+EAGIKSA + ++G AYG L E
Sbjct: 136 TGGTEAQDWAEMLYRMYTRWAEAHGYSVEVLDVLDGDEAGIKSASMMIKGANAYGMLKSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPF+A RQTSF+ EVMP L +++ ++I D+E+ R+ G GGQ++
Sbjct: 196 HGVHRLVRISPFDANARRQTSFASLEVMPEL-NDNIQIEINPADIEMQVYRSSGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVR+ H PTG+ C +RSQL N+ A+ +KAKL IA +Q +I I+G
Sbjct: 255 NKTSSAVRLIHKPTGIVTSCQTQRSQLQNREYAMEMMKAKLYQIALQQHKDKIDDIKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+ WG QIR+YVF PY LVKD RT +E+ ++ +VMDG+L+ FI +YLK
Sbjct: 315 NEIAWGHQIRSYVFMPYTLVKDHRTNYESGNVQAVMDGDLDGFIYAYLK 363
>gi|152977397|ref|YP_001376914.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
gi|152026149|gb|ABS23919.1| peptide chain release factor 2 [Bacillus cytotoxicus NVH 391-98]
Length = 327
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 216/330 (65%), Gaps = 7/330 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEE 100
++ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 EAGFWDDQQGAQTVINEANALKD---MVGKFR-QLDETFENLEVTHELLKEEYDKDLHEE 58
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK
Sbjct: 59 LESEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEK 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ +K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 RGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
EV+P +E +++++ EDL++ RA G GGQ+VN ++AVRITHIPT V C E
Sbjct: 179 SCEVVPEFNDE-VEIEVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTIVTCQSE 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD
Sbjct: 238 RSQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDH 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDGE++PFI +YL+ + S
Sbjct: 298 RTNTEVGNVQAVMDGEIDPFIDAYLRSRIS 327
>gi|340355245|ref|ZP_08677937.1| peptide chain release factor RF2 [Sporosarcina newyorkensis 2681]
gi|339622685|gb|EGQ27200.1| peptide chain release factor RF2 [Sporosarcina newyorkensis 2681]
Length = 334
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 217/340 (63%), Gaps = 9/340 (2%)
Query: 34 LAELEMKAADSSFWDNRAEAQETL---QALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ ELE + FWD++ AQ+ + AL D+ + N L D + ++ + +++ +
Sbjct: 1 MQELEEMMLEPGFWDDQDAAQKVISESNALKDIVGEYNDLNDTQENLEMTLELLREEADE 60
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
+ + + E +KE +D+F+L LLS +DK AV+ I +GAGGT++QDWA ML
Sbjct: 61 ELQEELVSE-----LKEFKGRMDKFDLQMLLSDEFDKNNAVLEIHSGAGGTESQDWASML 115
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY RW E +K ++ G+EAG+KS + V+G AYGYL EKG HR+VR SPF+
Sbjct: 116 LRMYTRWAEHHGFKVETLDYQAGDEAGVKSVTLSVKGHNAYGYLKAEKGVHRLVRISPFD 175
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
+ G R TSFS EVMP + +D+ + ED+++ R+ G GGQ+VN ++AVR+THIP
Sbjct: 176 SSGRRHTSFSSIEVMPEF-DGDIDLDLKTEDIKVDTYRSSGAGGQHVNTTDSAVRMTHIP 234
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG V C ERSQ+ N+ +A++ LKAK+ I E+ + + +IRG+ + WG QIR+YV
Sbjct: 235 TGAIVTCQTERSQIKNRERAMNLLKAKIYQIRVEEEEARLAEIRGEQKEIGWGSQIRSYV 294
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
FHPY +VKD RT ET ++ SVMDG+L+PFI +YL+ + S
Sbjct: 295 FHPYSMVKDHRTNEETGNVSSVMDGDLDPFINAYLRSRIS 334
>gi|15674713|ref|NP_268887.1| peptide chain release factor 2 [Streptococcus pyogenes SF370]
gi|71910343|ref|YP_281893.1| peptide chain release factor 2 [Streptococcus pyogenes MGAS5005]
gi|13621834|gb|AAK33608.1| putative peptide chain release factor 2 [Streptococcus pyogenes M1
GAS]
gi|71853125|gb|AAZ51148.1| bacterial peptide chain release factor 2 [Streptococcus pyogenes
MGAS5005]
gi|395453579|dbj|BAM29918.1| peptide chain release factor 2 [Streptococcus pyogenes M1 476]
Length = 337
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 221/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS L EE + +L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+
Sbjct: 61 DDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNANGFKIEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
>gi|322376937|ref|ZP_08051430.1| peptide chain release factor 2 [Streptococcus sp. M334]
gi|417924151|ref|ZP_12567603.1| peptide chain release factor 2 [Streptococcus mitis SK569]
gi|418967528|ref|ZP_13519191.1| peptide chain release factor 2 [Streptococcus mitis SK616]
gi|419766390|ref|ZP_14292594.1| peptide chain release factor 2 [Streptococcus mitis SK579]
gi|321282744|gb|EFX59751.1| peptide chain release factor 2 [Streptococcus sp. M334]
gi|342836205|gb|EGU70421.1| peptide chain release factor 2 [Streptococcus mitis SK569]
gi|383344141|gb|EID22311.1| peptide chain release factor 2 [Streptococcus mitis SK616]
gi|383354126|gb|EID31702.1| peptide chain release factor 2 [Streptococcus mitis SK579]
Length = 329
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 216/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ EE + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VQEELVTQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
Length = 368
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 238/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ ++++DD + ++ EE D +D L EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKADALRSRIDDLAVLFEMAEEEDDSDT--LAEAESELTSVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT + E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L +
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ + ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAAMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|392955454|ref|ZP_10320985.1| peptide chain release factor 2 [Bacillus macauensis ZFHKF-1]
gi|391878381|gb|EIT86970.1| peptide chain release factor 2 [Bacillus macauensis ZFHKF-1]
Length = 326
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 215/329 (65%), Gaps = 7/329 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
++ +FWD++ AQ + +KD++N + DD +++ EM + D + +
Sbjct: 2 SNPTFWDDQNAAQTVISEANGLKDQVNQFETLSNQYDD----LEVAHEMLKEEADPDMQK 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L++AL+ FEL+ LL+ PYD+ A++ + GAGGT++QDWA MLLRMY R+ E
Sbjct: 58 ELERDLKALSEALNSFELSLLLNQPYDQNNAILELHPGAGGTESQDWASMLLRMYTRYAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ YK ++ GEEAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 118 RKGYKVETLDYLPGEEAGVKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
+V+P + +++ ++ + EDL++ RA G GGQ+VN ++AVRITHIPT V C
Sbjct: 178 VSCDVVPEINDDT-EIDVRTEDLKVDTYRASGAGGQHVNTTDSAVRITHIPTNTVVSCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LKAKLL E++ +E+ +IRG+ + WG QIR+YVFHPY L KD
Sbjct: 237 ERSQIKNRDRAMKMLKAKLLQRKIEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLAKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYK 368
RT E ++ +VMDG++E FI +YL+ K
Sbjct: 297 HRTNTEMGNVQAVMDGDIESFIDAYLRSK 325
>gi|421487867|ref|ZP_15935265.1| peptide chain release factor 2 [Streptococcus oralis SK304]
gi|400369829|gb|EJP22826.1| peptide chain release factor 2 [Streptococcus oralis SK304]
Length = 329
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|117928939|ref|YP_873490.1| peptide chain release factor 2 [Acidothermus cellulolyticus 11B]
gi|166223620|sp|A0LVP4.1|RF2_ACIC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|117649402|gb|ABK53504.1| bacterial peptide chain release factor 2 (bRF-2) [Acidothermus
cellulolyticus 11B]
Length = 369
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 226/362 (62%), Gaps = 7/362 (1%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
QD + KD++ R+ I L + +E A+LE +AAD W++ AQ L+
Sbjct: 4 QDPHEHLKDLDT---RLAGIEQVLDLPAMRREAADLERQAADPGLWNDPENAQRVTSRLS 60
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
++ +I + + ++DD + + +L E D EA + + L KA+D E+ LL
Sbjct: 61 FLQAEIRRVEGLRKRLDDVMVLFELAEA--ENDEPTRTEALAEMAALQKAIDDLEVRTLL 118
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
SG YD A+++I + AGG DA DWA MLLRMY+RW E+ Y T +++ S EEAGIKSA
Sbjct: 119 SGEYDAREALVTINSQAGGVDAADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSA 178
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
V + YG L+ E GTHR+VR SPF+ + RQTSF+G +V+P++ E++ + IPE++
Sbjct: 179 TFIVHAPFTYGLLAAEHGTHRLVRISPFDNQARRQTSFAGVDVVPVV-EKTDHIDIPEDE 237
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
+ + R+ G GGQ VN ++AVRITH+PTG+ V C ERSQL N+ A+ L+A+LL
Sbjct: 238 IRVDVFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNRATAMMVLQARLLER 297
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
++ A+++ +RG+ + WG QIRNYV HPY+LVKD+RT ETS+ V+DGE++ FI
Sbjct: 298 RRQEEAAKLAALRGETTTS-WGTQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFI 356
Query: 362 KS 363
+
Sbjct: 357 DA 358
>gi|262283020|ref|ZP_06060787.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
sp. 2_1_36FAA]
gi|262261272|gb|EEY79971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Streptococcus
sp. 2_1_36FAA]
Length = 347
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 221/342 (64%), Gaps = 5/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE+E+A LE K + FWD+ AQ+T Q L ++K D++ ++
Sbjct: 9 LEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMTDLFDESEILLDF 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E DS E + EL K + +E+T LLS PYD A++ I G+GGT+AQDW
Sbjct: 69 LAEDDSVQE----ELEEKLAELEKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDW 124
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
DMLLRMY R+G + +K V++ G+EAGIKS + EG +AYG L E G HR+VR
Sbjct: 125 GDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRI 184
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ R TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+
Sbjct: 185 SPFDSAKRRHTSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRL 243
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V+ T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QI
Sbjct: 244 THIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEISWGSQI 303
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVF PY +VKD RT +E + + VMDG+L+ FI +YLK++
Sbjct: 304 RSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWR 345
>gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
Length = 339
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 212/333 (63%), Gaps = 3/333 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ E K A FWD+ +AQ + + VK ++ + DDAV +++L +E
Sbjct: 2 IENFEEKMAAPDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADE--EG 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D L E IK+L +++FEL LL+ PYDK A++ + GAGGT++QDW ML RM
Sbjct: 60 DDSLAGEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRM 119
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G
Sbjct: 120 YTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSG 179
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF +V+P + +E +++ I EDL+I RA G GGQ++N ++AVRITH+PTGV
Sbjct: 180 RRHTSFVSCDVVPEINDE-VELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGV 238
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ +A++ L++KL E++ E+ +IRG+ WG QIR+YVFHP
Sbjct: 239 VVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHP 298
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y +VKD RT ET +I +VMDG+L+ FI YL+
Sbjct: 299 YSMVKDHRTQVETGNIGAVMDGDLDGFIDGYLR 331
>gi|253752128|ref|YP_003025269.1| peptide chain release factor 2 [Streptococcus suis SC84]
gi|253753953|ref|YP_003027094.1| peptide chain release factor 2 [Streptococcus suis P1/7]
gi|253755172|ref|YP_003028312.1| peptide chain release factor 2 [Streptococcus suis BM407]
gi|251816417|emb|CAZ52048.1| peptide chain release factor 2 [Streptococcus suis SC84]
gi|251817636|emb|CAZ55384.1| peptide chain release factor 2 [Streptococcus suis BM407]
gi|251820199|emb|CAR46580.1| peptide chain release factor 2 [Streptococcus suis P1/7]
Length = 364
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 233/368 (63%), Gaps = 5/368 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ +E ++ R S L+ LE+E+A LE K + FW++ AQ+T Q L +
Sbjct: 2 DTAEIRQKIEELGKKLTSFRGSLDLEGLEEEIAILENKMTEPDFWNDNLAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K+ D++ ++ E +S L+E+ + EL+K + +E+T LLS
Sbjct: 62 LKNTYGNFHQMLDLYDESEILLDFLAEDESVRDELVEK----LVELDKTMTAYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD A++ I G+GGT+AQDW +MLLRMY R+G + + ++ G+EAGIKS
Sbjct: 118 EPYDHNNAILEIHPGSGGTEAQDWGEMLLRMYQRYGNAKGFIVETLDYQAGDEAGIKSVT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ G AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++++I ++++
Sbjct: 178 LSFTGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEIEIRDDEV 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+GG GGQNVNKV T VR+THIPTG+ + T +R+Q N+ +A+ L+AKL +
Sbjct: 237 KMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVTQSTVDRTQYGNRDRAMKLLQAKLYQLE 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+E++A+E+ ++GD + WG QIR+YVF PY +VKD RTG+E + + VMDG+L+ FI
Sbjct: 297 QEKKAAEVDSLKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYEVAQVDKVMDGDLDGFID 356
Query: 363 SYLKYKYS 370
+YLK++ S
Sbjct: 357 AYLKWRIS 364
>gi|366089975|ref|ZP_09456341.1| Bacterial peptide Chain Release Factor 2 [Lactobacillus acidipiscis
KCTC 13900]
Length = 333
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 209/327 (63%), Gaps = 2/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ SFWDN +AQ + +K K + + +DD +++L E D +D + E+
Sbjct: 2 AEPSFWDNSQKAQTVIDENNTLKTKYDNFNSLQENVDDLEVLLELAE-ADPSDNEITEDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
AS + K ++Q++LT LL+G YDK A++ I GAGGT++QDW MLLRMY RW E+
Sbjct: 61 ASKYAAIQKQMEQYQLTLLLNGQYDKNNAILEIHPGAGGTESQDWGSMLLRMYDRWAEQH 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + + G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 121 DFKVETVDYQEGDEAGIKSVTLLISGTNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
VMP L ++ +++++ ED+++ R+ G GGQ++NK +AVR+ HIPTG+ +R
Sbjct: 181 VNVMPELSDD-VEIELRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVTSSQAQR 239
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ NK A +KAKL + E++ E I+G+ + WG QIR+YVFHPY +VKD R
Sbjct: 240 SQFQNKATAEKMMKAKLYQMEMEKKEQEKADIQGEQMDIGWGSQIRSYVFHPYSMVKDHR 299
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T +ET +I +VMDGEL+ FI +YL++K
Sbjct: 300 TNYETGNISAVMDGELDGFINAYLQWK 326
>gi|168333703|ref|ZP_02691956.1| peptide chain release factor 2 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 349
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/341 (41%), Positives = 215/341 (63%), Gaps = 3/341 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +++++ ELE +A FW N AQ LQ D K+ I+ +D + ++ +
Sbjct: 9 VTHVQEQITELETISATPDFWQNSKYAQSVLQEXKDYKEIISKYKKLCNMYEDVLVLIDM 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
++ DA + EA S + D + LL G YDK A+IS+ AGAGGT+A DW
Sbjct: 69 G--IEEHDADMCAEAISDANSFIEFYDNLRTSTLLDGEYDKNDAIISLHAGAGGTEACDW 126
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
+MLLRMY RW EK +K+++++ GEEAG+KSA +E+ G+ AYGYL EKG HR+VR
Sbjct: 127 NNMLLRMYTRWAEKHGFKSKLLDILDGEEAGVKSATLEISGQNAYGYLKSEKGIHRLVRI 186
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ +VMP + +++ ++ I EDL+I R+ G GGQ+VN ++AVRI
Sbjct: 187 SPFDSGGRRHTSFASLDVMPKI-DDTAEITINPEDLQIDTYRSSGAGGQHVNTTDSAVRI 245
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH P+G+ V+C ERSQ+ N+ + L +KLL +++ +I +IRG+ WG QI
Sbjct: 246 THKPSGIVVQCQNERSQIQNRETCMKMLASKLLYKQHQEQLLKIDEIRGEKKDIAWGSQI 305
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
R+YVFHPY +VKD RT ET + +VMDG+++ F+ +YL +
Sbjct: 306 RSYVFHPYNMVKDHRTNQETGNTGAVMDGDIDAFVNAYLAW 346
>gi|358447104|ref|ZP_09157638.1| peptide chain release factor 2 [Corynebacterium casei UCMA 3821]
gi|356606976|emb|CCE55993.1| peptide chain release factor 2 [Corynebacterium casei UCMA 3821]
Length = 367
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 233/374 (62%), Gaps = 11/374 (2%)
Query: 7 LRKDVEAASDRVE----EIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+R D+ AA D + I + LE+ + ELE +A D S WD+ AQ+ L+
Sbjct: 1 MRPDISAAIDDLSATLTTIEKVMDPRALEERVRELEAQAGDPSLWDDPNHAQKVTSELSA 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+ K+ LT + +++D + +L EE DA L +E ++E A++ E+T +LS
Sbjct: 61 TQGKLRKLTTLRGRLEDLPVMYELAEE--EGDASLADEELDAVRE---AIESLEVTTMLS 115
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD+ AVI+I +GAGG DA DWA+ML+RMY RW EK +K + + S EEAGIKSA
Sbjct: 116 GEYDQREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDIYDVSYAEEAGIKSAT 175
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V G Y YG LS E+G HR+VR SPF+ + RQTSF+ EV+P++ E++ ++IP+ ++
Sbjct: 176 FVVHGEYMYGTLSVEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVV-EQTDSIEIPDSEI 234
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ R+ G GGQ+VN ++AVR+TH+PTG+ V C E+SQ+ NK A+ L+AKLL
Sbjct: 235 RVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERK 294
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ +E+ + G A WG Q+R+YV HPY++VKD+RT HE D V+ GE++ F++
Sbjct: 295 RQEERAEMDAL-GAGGNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGEIDDFLE 353
Query: 363 SYLKYKYSMSLSAS 376
+ ++++ S S S
Sbjct: 354 AGIRWRMSEQSSES 367
>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|229576671|sp|B2V5M0.1|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 369
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 229/351 (65%), Gaps = 23/351 (6%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQET----------LQALTDVKDKINLLTDFKTKM 77
++LE+E+ +L+ AD +FW++ +AQE L+ + V K+N L D+
Sbjct: 27 EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDKKVNNLLDY---- 82
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+T++++ E D L E +KE+ K + + EL LLS D + A++++ AG
Sbjct: 83 ---ITLLEMEE-----DQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAG 134
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
+GG +A DW +MLLRMY RW EK+ Y+ +V+ + AG+KSA + ++G YAYGYL GE
Sbjct: 135 SGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYLKGE 194
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
+G HR+VR SPF+A R TSFS V+P + +E + V+I EEDL I RA G GGQ+V
Sbjct: 195 QGVHRLVRISPFDANKRRHTSFSAVSVIPEI-DEDIKVEINEEDLRIDTYRASGAGGQHV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++AVRITHIPTG+ V C ERSQL NK+KA + LKAKL + E+R + K++ G+
Sbjct: 254 NKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEGEK 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG QIR+YVF PY++VKD+RTG ET +I +VMDGE++ FI+SYLK+K
Sbjct: 314 KDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364
>gi|389574968|ref|ZP_10165019.1| peptide chain release factor RF2 [Bacillus sp. M 2-6]
gi|388425392|gb|EIL83226.1| peptide chain release factor RF2 [Bacillus sp. M 2-6]
Length = 327
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+++ FW+++ +AQ + +KD +N + D+ L +E D L E
Sbjct: 2 SEADFWNDQQKAQGVINEANALKDYVNTYHELSESHDELQMTHDLLKE--DYDEDLHAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 EKELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITHIPT V V C ER
Sbjct: 180 CDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNRERAMKMLKSKLYQKRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+L+ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDLDSFIDAYLRSKLS 327
>gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453]
gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453]
Length = 339
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 212/333 (63%), Gaps = 3/333 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ E K A FWD+ +AQ + + VK ++ + DDAV + +L +E
Sbjct: 2 IENFEEKMAAPDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADE--EG 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D L E IK+L K +++FEL LL+ PYDK A++ + GAGGT++QDW ML RM
Sbjct: 60 DDSLAGEIGETIKDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRM 119
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G
Sbjct: 120 YTRWAEKRGFKVETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSG 179
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF +V+P + +E +++ I EDL+I RA G GGQ++N ++AVRITH+PTGV
Sbjct: 180 RRHTSFVSCDVVPEINDE-IELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGV 238
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ +A++ L++KL E++ E+ +IRG+ + WG QIR+YVFHP
Sbjct: 239 VVTCQNERSQIKNRERAMTMLRSKLYERKIEEQKKELAEIRGEQSEIAWGSQIRSYVFHP 298
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y + KD RT ET +I +VMDG+L+ FI YL+
Sbjct: 299 YSMAKDHRTQVETGNIGAVMDGDLDAFIDGYLR 331
>gi|410458996|ref|ZP_11312750.1| peptide chain release factor 2 [Bacillus azotoformans LMG 9581]
gi|409930702|gb|EKN67697.1| peptide chain release factor 2 [Bacillus azotoformans LMG 9581]
Length = 327
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 212/327 (64%), Gaps = 5/327 (1%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEEAAS 103
+FWD++ AQ+ + +KD + T D+ VT L EE D L +E
Sbjct: 5 NFWDDQQAAQQVINETNALKDIVGEYTALNESFDNLEVTHELLKEEYDED---LQKELEK 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRY 163
IK L++++ QFEL LLS PYDK A++ + GAGGT++QDW +LLRMY RW EK+ +
Sbjct: 62 EIKTLSESVSQFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSLLLRMYTRWAEKKGF 121
Query: 164 KTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAE 223
K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF +
Sbjct: 122 KVETLDYLAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCD 181
Query: 224 VMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQ 283
VMP EE +++++ + DL+I R+ G GGQ++N ++AVRITH+PTG+ V C ERSQ
Sbjct: 182 VMPEFNEE-IEIEVRDADLKIDTYRSTGAGGQHINTTDSAVRITHLPTGIVVTCQSERSQ 240
Query: 284 LANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG 343
+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD RT
Sbjct: 241 IKNREQAMKMLKAKLYQKKIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300
Query: 344 HETSDIVSVMDGELEPFIKSYLKYKYS 370
E + +V+DGE++PFI +YL+ + S
Sbjct: 301 VEIGNTQAVVDGEIDPFIDAYLRSRLS 327
>gi|307702035|ref|ZP_07639043.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
gi|307616680|gb|EFN95869.1| peptide chain release factor 2 [Streptococcus mitis NCTC 12261]
Length = 329
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ EE + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHEELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|352685083|ref|YP_004897068.1| peptide chain release factor [Acidaminococcus intestini RyC-MR95]
gi|350279738|gb|AEQ22928.1| peptide chain release factor [Acidaminococcus intestini RyC-MR95]
Length = 366
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 229/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR + +R+ E++ ++ ++ + +L+ + A FWD+ +AQ+ Q ++K +
Sbjct: 6 LRPQIGELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSE 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ T +TK+DD T+ ++ M+ D L+ E S ++ L + EL LLS YD
Sbjct: 66 VDTFTSLETKVDDLDTLWEMA--MEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++++ AGAGGT+AQDW MLLRM+ R+ E + ++ +++ GEEAG KSA + ++
Sbjct: 124 ANNAIMNLHAGAGGTEAQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG+L EKG HR+VR SPF++ R TSF+ +VMP + + +++V I +D+ + +
Sbjct: 184 GHNAYGFLKSEKGVHRLVRISPFDSNARRHTSFAAVDVMPEI-DNTVEVNINMDDVRVDY 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK +AVR+TH+PTG+ V+C ERSQL NK + L L+AKL + +
Sbjct: 243 YRASGAGGQHVNKTSSAVRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQ 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+I + GD EWG QIR+YVF PY LVKD RTG ET +I +VMDG+L+ F++SYL+
Sbjct: 303 DQKISDLAGDYQAIEWGSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLR 362
>gi|227824555|ref|ZP_03989387.1| peptide chain release factor [Acidaminococcus sp. D21]
gi|226905054|gb|EEH90972.1| peptide chain release factor [Acidaminococcus sp. D21]
Length = 382
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 229/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR + +R+ E++ ++ ++ + +L+ + A FWD+ +AQ+ Q ++K +
Sbjct: 22 LRPQIGELRNRLGELKTGLKIEPKKERIQDLDYQMAAPGFWDDPDKAQKVAQEANNLKSE 81
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
++ T +TK+DD T+ ++ M+ D L+ E S ++ L + EL LLS YD
Sbjct: 82 VDTFTSLETKVDDLDTLWEMA--MEEKDDTLVSEMESELEGAKHTLSELELGMLLSDEYD 139
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++++ AGAGGT+AQDW MLLRM+ R+ E + ++ +++ GEEAG KSA + ++
Sbjct: 140 ANNAIMNLHAGAGGTEAQDWTGMLLRMFTRYAEGKGFEVELLDVLPGEEAGTKSATLAIK 199
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG+L EKG HR+VR SPF++ R TSF+ +VMP + + +++V I +D+ + +
Sbjct: 200 GHNAYGFLKSEKGVHRLVRISPFDSNARRHTSFAAVDVMPEI-DNTVEVNINMDDVRVDY 258
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK +AVR+TH+PTG+ V+C ERSQL NK + L L+AKL + +
Sbjct: 259 YRASGAGGQHVNKTSSAVRMTHLPTGIVVQCQNERSQLQNKERCLQLLRAKLFEYEKAIQ 318
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+I + GD EWG QIR+YVF PY LVKD RTG ET +I +VMDG+L+ F++SYL+
Sbjct: 319 DQKISDLAGDYQAIEWGSQIRSYVFQPYTLVKDHRTGAETGNIQAVMDGDLDLFVESYLR 378
>gi|331003438|ref|ZP_08326937.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412484|gb|EGG91873.1| peptide chain release factor 2 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 337
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 211/334 (63%), Gaps = 4/334 (1%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E ++
Sbjct: 5 TFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEAM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
++E K +D ++ LL+G YD A++ + AGAGGT++ DW ML RMY RW K+ Y
Sbjct: 63 LEEFTKEIDALKIATLLTGEYDDASAIMKLNAGAGGTESCDWCSMLYRMYTRWAAKEGYT 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
V++ G+EAGIKS +++ G AYGYL E G HR+VR SPFNA G RQTSF ++
Sbjct: 123 VDVLDILDGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCDI 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V+C ERSQ
Sbjct: 183 MPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQF 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY +VKD RTG
Sbjct: 242 QNKDKAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRTGA 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 302 ESGNVSAVMDGDIDKFIIAYLTWQ-SLGCPARNA 334
>gi|134097701|ref|YP_001103362.1| peptide chain release factor 2 [Saccharopolyspora erythraea NRRL
2338]
gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
gi|166225115|sp|A4F8R2.1|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
Length = 367
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 230/359 (64%), Gaps = 5/359 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D++ S +E I + L L ++AELE +AA WD+ AQ L + ++
Sbjct: 8 DLKELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRK 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ D + +++D + +L+E D D L EA S +L K L+ E+ LLSG YD+
Sbjct: 68 IKDLRQRVEDLEVLYELSE--DEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQRE 125
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I A AGG DA D+A+ML+RMYVRW E+ Y V + S EEAG+KSA V Y
Sbjct: 126 AVVTIRAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPY 185
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ EE+ V+IPE+D+ + R+
Sbjct: 186 AYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EETDHVEIPEKDIRVDVFRS 244
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L++KLL +EQ +E
Sbjct: 245 SGPGGQSVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKLLAKKKEQERAE 304
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ ++ + WG Q+R+YV HPY++VKD+RT E + +V+DG+++ F+++ ++++
Sbjct: 305 LDALKDSG--SSWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWR 361
>gi|425735918|ref|ZP_18854229.1| peptide chain release factor 2 [Brevibacterium casei S18]
gi|425479152|gb|EKU46332.1| peptide chain release factor 2 [Brevibacterium casei S18]
Length = 372
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 237/364 (65%), Gaps = 13/364 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
NLR+ +A D + L L E+AEL +A+ SFWD+ AQ+T L+ +
Sbjct: 12 NLRQTYQAILD-------VSDLPTLRDEVAELTEEASAPSFWDDPDSAQKTSAKLSHKQG 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ L F ++DDA +++++E +D+ L EA I +L L + E++ LLSG Y
Sbjct: 65 TLEKLEKFGERIDDAELLIEMSEAEGDSDS--LVEAERDIAKLKDQLSELEISTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ AV+++ +GAGG DA DWA ML+RMY+RW E + Y + ++ S E AGIKSA I+V
Sbjct: 123 DERSAVVTVRSGAGGDDATDWAQMLIRMYIRWAEGRGYNVQELDTSYAEGAGIKSATIQV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEI 244
YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ ES D +++ E DL I
Sbjct: 183 NAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI--ESTDHIEVDENDLRI 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
R+ G GGQ+VN ++AVRITHIPTGV V E+SQ+ N+ A+ L+++LL +
Sbjct: 241 DVYRSSGPGGQSVNTTDSAVRITHIPTGVVVSMQNEKSQIQNREAAMRVLQSRLLERKRQ 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ A++ K++ GD +KA WG Q+R+YV HPY++VKD+RTG+E ++ +V DG+L+ I++
Sbjct: 301 EEAAQKKELAGD-IKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDLDGLIEAG 359
Query: 365 LKYK 368
++++
Sbjct: 360 IRWR 363
>gi|365133245|ref|ZP_09342629.1| peptide chain release factor 2 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363616055|gb|EHL67509.1| peptide chain release factor 2 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 370
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 218/349 (62%), Gaps = 3/349 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
V ++ + +++ L ELE K+A F+D+ A + + ++KD++ + +T +
Sbjct: 18 VTDLHDALAIERSRVRLEELEQKSASPEFYDDAAASGAVFAEMGELKDRLEQYSALQTML 77
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+DA T++++ E D D L EEA + + L+ +++ L LL+G YD A+++ AG
Sbjct: 78 EDAETLLEMCAEDD--DPALAEEADAAVNSLDAKVEELRLVTLLNGEYDANNAILTFHAG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGGT+AQDW +ML RMY R+ + + +V++ G+EAGIKSA I VEG AYG+L E
Sbjct: 136 AGGTEAQDWVEMLYRMYTRFAARHNWTVKVLDYLEGDEAGIKSASILVEGHNAYGFLRSE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
G HR+VR SPF+A G R TSF+ EVMP L ++++ V+I ED+++ R+ G GGQ++
Sbjct: 196 NGVHRLVRVSPFDASGRRHTSFASLEVMPEL-DDAITVEIKPEDIKMEVFRSSGAGGQHI 254
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK +AVR+ HIPTG+ V C ERSQ N+ + L AKL I E + +I I+G
Sbjct: 255 NKTSSAVRLIHIPTGIVVSCQNERSQFQNRDMCMKMLAAKLYQIKEREHLDKISDIKGVQ 314
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
WG QIR+YVF PY LVKD RTG E ++ VMDG+L+ FI +YLK
Sbjct: 315 NAIAWGSQIRSYVFMPYTLVKDHRTGFENGNVNGVMDGDLDGFINAYLK 363
>gi|417848117|ref|ZP_12494069.1| peptide chain release factor 2 [Streptococcus mitis SK1073]
gi|339455142|gb|EGP67750.1| peptide chain release factor 2 [Streptococcus mitis SK1073]
Length = 329
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ EE + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHEELVEQLSELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
xylanophilus DSM 9941]
Length = 366
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 235/362 (64%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR+ + S R++E+ A + +L + A L + + FWD+ A+ + +D+
Sbjct: 4 LREKISDLSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDR 63
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L+ + + +++D+ +++L E D LLEE ++ + + +++ E+ +L +G YD
Sbjct: 64 LKLMEELRGRLEDSSELLELAE----GDRELLEEVERELEGIERRIEEQEVARLFTGEYD 119
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A+++I +GAGG D+QDWA+ML RMY RW E++ + V+E + GEEAGIKSA V
Sbjct: 120 EGDAILTINSGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVS 179
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YA+G LS E+G HR+VR SPF+A R TSF+ V P + +++++V+I E+DL++
Sbjct: 180 GPYAFGLLSAERGVHRLVRISPFDASSRRHTSFASVAVAPAI-DDAVEVEIDEKDLKVDT 238
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK ++AVRITH+PTG+ V+C ERSQ N+ AL LKA+L + E+R
Sbjct: 239 YRASGAGGQHVNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKR 298
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
EI G+ + WG QIR+YV HPY++VKD+RTG ET D+ V+DG+L+ FI +YLK
Sbjct: 299 EQEIAAQSGEKAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYLK 358
Query: 367 YK 368
+
Sbjct: 359 RR 360
>gi|228477420|ref|ZP_04062056.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
gi|340398917|ref|YP_004727942.1| peptide chain release factor 2 [Streptococcus salivarius CCHSS3]
gi|387761386|ref|YP_006068363.1| peptide chain release factor 2 [Streptococcus salivarius 57.I]
gi|387784070|ref|YP_006070153.1| peptide chain release factor 2 [Streptococcus salivarius JIM8777]
gi|418017896|ref|ZP_12657452.1| peptide chain release factor 2 [Streptococcus salivarius M18]
gi|421452340|ref|ZP_15901701.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
salivarius K12]
gi|228250855|gb|EEK10043.1| peptide chain release factor 2 [Streptococcus salivarius SK126]
gi|338742910|emb|CCB93418.1| bacterial peptide chain release factor 2 (BRF-2) [Streptococcus
salivarius CCHSS3]
gi|338744952|emb|CCB95318.1| peptide chain release factor 2 [Streptococcus salivarius JIM8777]
gi|339292153|gb|AEJ53500.1| peptide chain release factor 2 [Streptococcus salivarius 57.I]
gi|345526745|gb|EGX30056.1| peptide chain release factor 2 [Streptococcus salivarius M18]
gi|400182771|gb|EJO17033.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Streptococcus
salivarius K12]
Length = 337
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 224/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|15896100|ref|NP_349449.1| peptide chain release factor 2 [Clostridium acetobutylicum ATCC
824]
gi|337738054|ref|YP_004637501.1| peptide chain release factor 2 [Clostridium acetobutylicum DSM
1731]
gi|384459565|ref|YP_005671985.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
gi|15025890|gb|AAK80789.1|AE007782_3 Protein chain release factor B [Clostridium acetobutylicum ATCC
824]
gi|325510254|gb|ADZ21890.1| peptide chain release factor 2 [Clostridium acetobutylicum EA 2018]
gi|336293316|gb|AEI34450.1| peptide chain release factor 2 [Clostridium acetobutylicum DSM
1731]
Length = 329
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 218/327 (66%), Gaps = 7/327 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG--LLEEAAS 103
FW++ AQE + +K +I+ +++++D ++++ E ++ + +L+E
Sbjct: 6 FWNDVKRAQEISMEIKFLKGRIDRFNSIESRIEDDNVLIEMCREDENEEEADEILKE--- 62
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRY 163
+++L++ +D F++ +LSG YD+ A++++ G GGTDAQDW MLLRMY RW E + +
Sbjct: 63 -VRDLHEEVDNFKIEIILSGEYDRNNAILNLHTGVGGTDAQDWTQMLLRMYTRWAEAKGF 121
Query: 164 KTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAE 223
K +++ G+EAGIKS I ++G +AYGYL EKG HR+VR SPFNA G RQTSF+ E
Sbjct: 122 KVDIIDMLPGDEAGIKSVSINIDGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASVE 181
Query: 224 VMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQ 283
V+P L +S D+ I EDL++ RA G GGQ+VNK E+AVRITH+PTG+ V+C ERSQ
Sbjct: 182 VLPQLT-QSQDIVIRPEDLKVDTYRASGAGGQHVNKTESAVRITHLPTGIVVQCQSERSQ 240
Query: 284 LANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG 343
+NK A++ LK+KL+ + E +++ + G+ WG QIR+YVF PY +VKD RTG
Sbjct: 241 HSNKETAMNMLKSKLVELKERMHKEKVEDLAGELKDMGWGNQIRSYVFQPYTMVKDHRTG 300
Query: 344 HETSDIVSVMDGELEPFIKSYLKYKYS 370
ETS++ +VMDGE++ FI YL + S
Sbjct: 301 VETSNVDAVMDGEIDKFIIEYLNKENS 327
>gi|70727136|ref|YP_254052.1| peptide chain release factor 2 [Staphylococcus haemolyticus
JCSC1435]
gi|68447862|dbj|BAE05446.1| peptide chain release factor 2 [Staphylococcus haemolyticus
JCSC1435]
Length = 332
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 212/328 (64%), Gaps = 4/328 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASI 104
FWD++ +AQ+ + +K +N + + +++D T L EE+D LE+
Sbjct: 6 FWDDQNKAQDVIDKNNALKSVVNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQNVLD 65
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
KE +DQFEL LL GP+D A++ + GAGGT++QDWA MLLRMY R+GE+Q +K
Sbjct: 66 FKE---KVDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFK 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
V+ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+ +V
Sbjct: 123 VETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDV 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ERSQ+
Sbjct: 183 IPEFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQI 242
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
N+ A+ LKAKL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 243 KNREAAMKMLKAKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNE 302
Query: 345 ETSDIVSVMDGELEPFIKSYLKYKYSMS 372
ET + +VMDGE+ PFI+SYL+Y + S
Sbjct: 303 ETGKVDAVMDGEIGPFIESYLRYTMNQS 330
>gi|169832431|ref|YP_001694217.1| peptide chain release factor 2 [Streptococcus pneumoniae
Hungary19A-6]
gi|172079637|ref|ZP_02709786.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1873-00]
gi|183603431|ref|ZP_02717047.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC3059-06]
gi|183603478|ref|ZP_02714985.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC0288-04]
gi|225854263|ref|YP_002735775.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
gi|237650402|ref|ZP_04524654.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI 1974]
gi|237822484|ref|ZP_04598329.1| peptide chain release factor 2 [Streptococcus pneumoniae CCRI
1974M2]
gi|303260019|ref|ZP_07345993.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
gi|303261425|ref|ZP_07347373.1| peptide chain release factor 2 [Streptococcus pneumoniae
SP14-BS292]
gi|303264092|ref|ZP_07350013.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
gi|303266295|ref|ZP_07352186.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
gi|303269536|ref|ZP_07355300.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
gi|307127694|ref|YP_003879725.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
gi|168994933|gb|ACA35545.1| peptide chain release factor 2 [Streptococcus pneumoniae
Hungary19A-6]
gi|172041988|gb|EDT50034.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1873-00]
gi|183574752|gb|EDT95280.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC0288-04]
gi|183576822|gb|EDT97350.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC3059-06]
gi|225722944|gb|ACO18797.1| peptide chain release factor 2 [Streptococcus pneumoniae JJA]
gi|302637559|gb|EFL68046.1| peptide chain release factor 2 [Streptococcus pneumoniae
SP14-BS292]
gi|302638938|gb|EFL69399.1| peptide chain release factor 2 [Streptococcus pneumoniae SP-BS293]
gi|302640921|gb|EFL71304.1| peptide chain release factor 2 [Streptococcus pneumoniae BS458]
gi|302644225|gb|EFL74481.1| peptide chain release factor 2 [Streptococcus pneumoniae BS457]
gi|302646497|gb|EFL76723.1| peptide chain release factor 2 [Streptococcus pneumoniae BS397]
gi|306484756|gb|ADM91625.1| peptide chain release factor 2 [Streptococcus pneumoniae 670-6B]
Length = 329
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|390935721|ref|YP_006393226.1| Peptide chain release factor 2 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389571222|gb|AFK87627.1| Peptide chain release factor 2 [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 327
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 218/329 (66%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW + ++QE + D+K+ I+ + + +D T+++L ++ D L +E
Sbjct: 2 SEPDFWSDLEKSQELSKKQKDLKEIISEYEALEKQWEDLHTLIELG--LEEGDESLSQEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
K L+K ++ ++ LLSGPYDK A++SI AGAGGT+AQDW +MLLRMY+RW +
Sbjct: 60 HDEYKALSKKVNDMKIKTLLSGPYDKNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
Y V+ G++AG+KS I V+G +AYGYL E G HR+VR SPF+A G R TSF+
Sbjct: 120 NYDVETVDYLPGDDAGVKSVTIMVKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFAL 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P + ++ + V I EDL+I R+ G GGQ+VNK E+A+RITH+PTG+ V+C ER
Sbjct: 180 VEVLPEI-DDDIKVDIRPEDLKIDTYRSSGAGGQHVNKTESAIRITHLPTGIIVQCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL+ + +++ +I+ ++G+ +A WG QIR+YVF PY LVKD R
Sbjct: 239 SQMQNRETAMKMLKAKLMDMMIKEQKEKIEDLKGEHKEAGWGNQIRSYVFQPYTLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDGE++ FI +YLK K S
Sbjct: 299 TNFEVGNVNAVMDGEIDDFINAYLKQKVS 327
>gi|383808491|ref|ZP_09964031.1| peptide chain release factor 2 [Rothia aeria F0474]
gi|383448714|gb|EID51671.1| peptide chain release factor 2 [Rothia aeria F0474]
Length = 375
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 240/351 (68%), Gaps = 3/351 (0%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + L+ +E+ +AEL +AAD WD+ AQ+ AL+ + ++N LT +++DD
Sbjct: 20 IAAVSDLEGIERAIAELSERAADPQLWDDPQVAQQVTSALSHKQAELNRLTSLGSRIDDV 79
Query: 81 VTIVKLTEEMDSTDAG-LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+V+L E D A LL EA + + + L++ E+ LLSG YD+ AV++I +GAG
Sbjct: 80 EVMVELAEAEDPQSAQELLSEARTECVSIRRKLEELEVLVLLSGEYDQREAVVTIRSGAG 139
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
G DA D+A+MLLRMY+RW EK Y T++++ S EEAG+KSA EV +A+G LS E G
Sbjct: 140 GVDAADFAEMLLRMYLRWAEKNGYPTKLLDTSYAEEAGLKSATFEVNAPFAFGRLSVEAG 199
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 259
THR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IPE ++++ R+ G GGQ+VN
Sbjct: 200 THRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDAIEIPEAEIKVDVFRSSGPGGQSVNT 258
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
++AVR+TH+PTG+ V E+SQL N+ AL L+++LL++ +E+ ++ K++ GD +K
Sbjct: 259 TDSAVRMTHLPTGIVVSMQNEKSQLQNRAAALRVLQSRLLLLRKEEEDAKKKELAGD-IK 317
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
A WG Q+R+YV HPY++VKD+RTG+E + +V+DG L FI + ++++ S
Sbjct: 318 ASWGDQMRSYVLHPYQMVKDLRTGYEEGNTANVLDGGLNAFIDAGIRWRAS 368
>gi|422729707|ref|ZP_16786105.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
Length = 327
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|345861348|ref|ZP_08813614.1| peptide chain release factor 2 [Desulfosporosinus sp. OT]
gi|344325613|gb|EGW37125.1| peptide chain release factor 2 [Desulfosporosinus sp. OT]
Length = 332
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 211/321 (65%), Gaps = 3/321 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
WD+ AQ+ +Q L ++K+ + + K+++ T+ L E D D L E +
Sbjct: 10 LWDDPDLAQKIMQELAYHQNKVKTYDELEGKLEETETLWLLAIEED--DLSLESEIEQEV 67
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ L + EL LLSG YD+ A++++ AGAGGT+AQDW ML R+Y+RWGE+ YK
Sbjct: 68 RSLRGRFEALELEILLSGQYDRNNAILTLHAGAGGTEAQDWVQMLYRLYIRWGERHGYKV 127
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ GEEAGIKSA + G AYGY EKG HR+VR SPF++ G R TSF+ +V+
Sbjct: 128 ETLDFLPGEEAGIKSATLSFSGENAYGYAKSEKGVHRLVRISPFDSSGRRHTSFASVDVI 187
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + E++ ++ I EDL + R+GG GGQ+VNK ++A+RITH+P+GV V+C ERSQ+
Sbjct: 188 PEVTEDN-EITIDTEDLRVDTYRSGGAGGQHVNKTDSAIRITHLPSGVVVQCQSERSQIQ 246
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ L+AKLL + +++ SEI +IRG+ + WG QIR+YVFHPY LVKD RT E
Sbjct: 247 NKAAAMRVLQAKLLELKRKEQESEISEIRGEQQEIAWGSQIRSYVFHPYSLVKDHRTNVE 306
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
T ++ +VMDGE++ FI ++L+
Sbjct: 307 TGNVSAVMDGEIDAFIAAFLQ 327
>gi|420152309|ref|ZP_14659363.1| peptide chain release factor 2 [Actinomyces massiliensis F0489]
gi|394764981|gb|EJF46604.1| peptide chain release factor 2 [Actinomyces massiliensis F0489]
Length = 371
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 225/350 (64%), Gaps = 5/350 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + L +A L +AA WD+ AQ AL+ + + + + ++DD
Sbjct: 19 IAAVTDPEALRARIASLSERAAAPDLWDDPEAAQAVTSALSHAQADLGRVEELGARIDDL 78
Query: 81 VTIVKLTEEMDSTDAG-LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+V++ E DA LL EA S ++ ++K L E+ LLSG YD+ AV++I +GAG
Sbjct: 79 EAMVEMAGEESGEDADELLAEADSDLEAISKDLSDLEIRTLLSGEYDQRDAVVTIRSGAG 138
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
G DA D+A+MLLRMY RW E+ Y +V+ S EEAG+KS EV YAYG LS E G
Sbjct: 139 GVDAADFAEMLLRMYTRWAERHDYSVKVLNTSYAEEAGLKSVTFEVHAPYAYGTLSVEGG 198
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVN 258
THR+VR SPF+ +G RQTSF+ EV+PL+ ES D + +PE D+ I R+ G GGQ+VN
Sbjct: 199 THRLVRISPFDNQGRRQTSFAAVEVIPLI--ESTDHIDVPETDIRIDVFRSSGPGGQSVN 256
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVRITHIPTG+ V +E+SQ+ N+ A+ L+++LL++ +++ ++ K++ GD V
Sbjct: 257 TTDSAVRITHIPTGLVVSMQDEKSQIQNRAAAMRVLQSRLLLLKQQEEDAKKKELAGD-V 315
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KA WG Q+R+YV +PY++VKD+RT HE + SV DG+++ FI S ++++
Sbjct: 316 KASWGDQMRSYVLNPYQMVKDLRTNHEVGNPDSVFDGDIDGFIDSGIRWR 365
>gi|57234653|ref|YP_181313.1| peptide chain release factor 2, programmed frameshift, partial
[Dehalococcoides ethenogenes 195]
gi|57225101|gb|AAW40158.1| peptide chain release factor 2, programmed frameshift
[Dehalococcoides ethenogenes 195]
Length = 362
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/336 (44%), Positives = 214/336 (63%), Gaps = 5/336 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +A FW ++ AQ+ ++ L K + + +++D + + LT E
Sbjct: 25 ELEITELESASASPDFWQDQQNAQKAMKKLAANKRVSEVWRGLEQRVNDLLELFALTHE- 83
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L E + L +D E+ SG YD A++++ AGAGG ++QDWA ML
Sbjct: 84 ---DPSLGNEIEREVNTLTAEIDTLEVGLAFSGQYDSRNALLTVHAGAGGVESQDWAGML 140
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRM++RW EK+ + V+++S GEEAGIKSA +++EG YAYG+L E G HR++R SPF+
Sbjct: 141 LRMFMRWAEKKGFGMEVLDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFD 200
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSF+ EVMP E+S+D+ I ED++I R+ G GGQNV KV TAVR+THIP
Sbjct: 201 ADHARHTSFALVEVMPE-AEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIP 259
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
+G+ V ERSQ N+ A+ L +KLL + +RA E +I+G+ + AEWG QIR+YV
Sbjct: 260 SGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKIKGERISAEWGNQIRSYV 319
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
HPYK+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 320 LHPYKMVKDHRTDYEVGNAEAVLEGELDGFINAYLR 355
>gi|332671116|ref|YP_004454124.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
gi|332340154|gb|AEE46737.1| peptide chain release factor 2 [Cellulomonas fimi ATCC 484]
Length = 382
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 242/358 (67%), Gaps = 4/358 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I+A + L+ ++A L +A+ + WD+ AQ+ AL+ + +++ + ++
Sbjct: 29 LESIQAVSDPTALKAKIALLSEQASVPNLWDDPDAAQKVTSALSATQAELDRVAKLGGRI 88
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD T+V+L EM+ D+ L EA + + K L + E+ LL+G YD+ AV++I +G
Sbjct: 89 DDLETLVELGVEMEDEDS--LAEAEVELTGIRKDLGELEVRTLLNGEYDQREAVVTIRSG 146
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+MLLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G+LS E
Sbjct: 147 AGGVDAADFAEMLLRMYLRWAERHGYPTTVLDTSYAEEAGLKSATFEVKAPYAFGHLSVE 206
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ ++IPE ++++ R+ G GGQ+V
Sbjct: 207 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIEIPESEIKVDVFRSSGPGGQSV 265
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ + + ++ K++ GD
Sbjct: 266 NTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLVRKAEEDAKKKELAGD- 324
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+KA WG Q+R+YV PY++VKD+RT HE + +V DG+++ FI++ ++++ S S+ A
Sbjct: 325 IKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWRRSQSVEA 382
>gi|383776055|ref|YP_005460621.1| putative peptide chain release factor 2 [Actinoplanes missouriensis
431]
gi|381369287|dbj|BAL86105.1| putative peptide chain release factor 2 [Actinoplanes missouriensis
431]
Length = 370
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 228/349 (65%), Gaps = 4/349 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L ++ A+LE +A+ WD++A AQE L V +I+ L ++++DDA ++++
Sbjct: 26 VDRLRRDKADLEEQASAPDLWDDQARAQEVNSRLAYVSGEISKLERLRSRLDDAGLLLEM 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E +D G + E I L KA+++ E+ LLSG YD A+++I AGAGG DA D+
Sbjct: 86 AEA--ESDEGSIAEVGDEITTLTKAVEEMEVRTLLSGEYDSREALVAIRAGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW E+ Y T V + S EEAG+KSA V+ YA+G LS E GTHR+VR
Sbjct: 144 AEMLMRMYLRWAERHGYPTEVYDTSYAEEAGLKSATFAVKVPYAFGTLSVESGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+G EVMP++ E++ + IP+ ++ + R+ G GGQ+VN ++AVR+
Sbjct: 204 SPFDNQGRRQTSFAGVEVMPVV-EQTDHIDIPDNEIRVDVYRSSGPGGQSVNTTDSAVRL 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ C E+SQL NK A+ L+A+LL ++ A+++ ++ D WG Q+
Sbjct: 263 THIPTGIVASCQNEKSQLQNKAAAMRVLQARLLERKRQEDAAKMADLKQDTT-GSWGDQM 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
R+YV HPY++VKD+RT E + V DG+L+ FI++ +K++ +SA
Sbjct: 322 RSYVLHPYQMVKDLRTEFEVGNPTGVFDGDLDGFIQAGIKWRKQNQMSA 370
>gi|354585137|ref|ZP_09004027.1| peptide chain release factor 2 [Paenibacillus lactis 154]
gi|353189157|gb|EHB54669.1| peptide chain release factor 2 [Paenibacillus lactis 154]
Length = 331
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/328 (45%), Positives = 212/328 (64%), Gaps = 5/328 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ + + VK ++ + DDAV +++L +E D L
Sbjct: 1 MAAPD--FWDDNEKAQGIISEMNAVKSAVDSYQKLQQDYDDAVVMIELADE--EGDDSLA 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E IKEL ++ FEL LL+ PYDK A++ + GAGGT++QDW ML RMY RW
Sbjct: 57 GEIGDTIKELVGRVEAFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TS
Sbjct: 117 EKRGFKVETLDYQPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +V+P + ++ ++V+I EDL+I RA G GGQ++N ++AVRITHIPTGV V C
Sbjct: 177 FVSCDVVPEITDD-VEVEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGVVVTCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A++ L++KL E++ E+ +IRG+ + WG QIR+YVFHPY +VK
Sbjct: 236 NERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSEIAWGSQIRSYVFHPYSMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RT ET ++ +VMDG+L+ FI YL+
Sbjct: 296 DHRTQVETGNVGAVMDGDLDAFIDGYLR 323
>gi|52082063|ref|YP_080854.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319647929|ref|ZP_08002147.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
gi|404490944|ref|YP_006715050.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|423684069|ref|ZP_17658908.1| peptide chain release factor 2 [Bacillus licheniformis WX-02]
gi|52005274|gb|AAU25216.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349954|gb|AAU42588.1| peptide chain release factor 2 [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|317390270|gb|EFV71079.1| peptide chain release factor 2 [Bacillus sp. BT1B_CT2]
gi|383440843|gb|EID48618.1| peptide chain release factor 2 [Bacillus licheniformis WX-02]
Length = 327
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW ++ +AQ + +KD +N ++ L +E D L E
Sbjct: 2 ADPDFWGDQQKAQTIINEANALKDYVNTYKSLSESHEELQMTHDLLKE--DPDQDLQNEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 VNELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP EE +D++I ED+++ RA G GGQ+VN ++AVRITH+PTGV V C ER
Sbjct: 180 CDVMPEFNEE-IDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDSFIDAYLRSKLS 327
>gi|410659494|ref|YP_006911865.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. DCA]
gi|410662472|ref|YP_006914843.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. CF]
gi|409021849|gb|AFV03880.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. DCA]
gi|409024828|gb|AFV06858.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. CF]
Length = 314
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 141/310 (45%), Positives = 206/310 (66%), Gaps = 3/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q LT KDK+ + + +++D + +L E D D L E + I +L E
Sbjct: 1 MQELTREKDKVTVHQQLQDQIEDIAALWELAVEED--DISLESEIENTIVKLKNQFADLE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
L LLSGPYD A+I++ +GAGGT++QDW ML RMYVRWGE++ +K ++ GEEA
Sbjct: 59 LEILLSGPYDSNNAIITLHSGAGGTESQDWVQMLYRMYVRWGERRGFKVETLDLLPGEEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKS + G AYGY EKG HR+VR SPF+A G R TSF+ +V+P + +++ ++
Sbjct: 119 GIKSVTFSLAGENAYGYAKCEKGVHRLVRISPFDASGRRHTSFASVDVIPEVTDDA-EIT 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
I EDL++ R+GG GGQ+VNK ++AVRITH+PTG+ V+C ERSQ+ N+ + L+A
Sbjct: 178 IDAEDLKVDTYRSGGAGGQHVNKTDSAVRITHLPTGIIVQCQSERSQIQNRAYCMRVLQA 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
KLL + +Q+ EI ++RG+ WG QIR+YVFHPY +VKD RT +ET ++ +VMDGE
Sbjct: 238 KLLELKRKQQEEEISEVRGEQNDIAWGSQIRSYVFHPYSMVKDHRTSYETGNVNAVMDGE 297
Query: 357 LEPFIKSYLK 366
++P++ +YL+
Sbjct: 298 IDPYVTAYLQ 307
>gi|313672869|ref|YP_004050980.1| peptide chain release factor 2 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
nitroreducens DSM 19672]
Length = 371
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 223/344 (64%), Gaps = 6/344 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
+ L+++L+ +E + D FW ++ E++ L+ + +K ++ + +D +++L
Sbjct: 27 EHLKEKLSNIEKQTHDPDFWSSK-ESKHLLKEQSSIKKFLDDWYYLVRRFEDMDVLLELQ 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE ++ A + E EL + ++ FEL +L+G D A+++I +GAGGT+A DWA
Sbjct: 86 EEGENVAAEIEEN----FTELKQIVNDFELKLILNGENDINNAILTIHSGAGGTEANDWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+MLLRMY+RW E +++K +++ G+EAGIKSA + + G YAYGYL GE G HR+VR S
Sbjct: 142 NMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGPYAYGYLKGETGVHRLVRLS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+A R TSF+ V+P + E+ +D+ I E DL+I RAGG GGQ+VN ++AVRIT
Sbjct: 202 PFDANNKRHTSFASVFVLPEI-EDDVDIVINESDLKIDTFRAGGAGGQHVNTTDSAVRIT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
H+PTG+ V C ERSQ NK AL LK+KL + E++ E ++ + +G QIR
Sbjct: 261 HLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNKEKNELESSKTEINFGSQIR 320
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
+YV HPYK+VKD+RT HET + +V+DGEL+ FI+SYL YK M
Sbjct: 321 SYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYLFYKAGM 364
>gi|335044896|ref|ZP_08537919.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 108
str. F0425]
gi|363896223|ref|ZP_09322777.1| peptide chain release factor 2 [Oribacterium sp. ACB7]
gi|333758682|gb|EGL36239.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 108
str. F0425]
gi|361961231|gb|EHL14449.1| peptide chain release factor 2 [Oribacterium sp. ACB7]
Length = 378
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/377 (38%), Positives = 231/377 (61%), Gaps = 6/377 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M +F + ++ + ++++ + L +K +AEL+ + FW + + +
Sbjct: 1 MIEFEQFKSELNTKEEPLKQLEQALDLDNKKKRIAELDRMMEEPDFWADAEKGNKLSTEA 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ +KD++ K +D ++++ +E DA ++ E ++ ++ L+ T L
Sbjct: 61 SHLKDEVEGFLKLKEDYEDIDALIQMGKE--EEDASVIPEIKEMLARFSEELENMNTTLL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD ++ + AGAGGT+A DWA +L RMY RW E+ + ++++ G+EAGIKS
Sbjct: 119 LSGEYDSMNVILRLNAGAGGTEANDWAGILYRMYTRWAERHGFSVKILDYLDGDEAGIKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+EV G+YAYGYL E G HR+VR SPFNA+G RQTSF +VMP + E +D+++ EE
Sbjct: 179 VTMEVVGQYAYGYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDI-ETDIDIEVREE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+++ RA G GGQ++NK +AVR+ HIPTG V C EERSQ+ NK KA+ LK KL +
Sbjct: 238 DIKMEVFRASGAGGQHINKTSSAVRLIHIPTGFVVACQEERSQIQNKNKAMQMLKTKLYL 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+E++ +++ IRG+ WG QIR+YV PY++VKD+RTG ET + +V+DG+++ F
Sbjct: 298 KEKEEQEAKLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRF 357
Query: 361 IKSYLKYKYSMSLSASD 377
I +YLK+ M L D
Sbjct: 358 ITAYLKW---MQLGCPD 371
>gi|379734499|ref|YP_005328005.1| peptide chain release factor 2 [Blastococcus saxobsidens DD2]
gi|378782306|emb|CCG01966.1| Peptide chain release factor 2 [Blastococcus saxobsidens DD2]
Length = 370
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/350 (40%), Positives = 232/350 (66%), Gaps = 9/350 (2%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + ++ +E+AELE++ WD+ AQ L+ ++ + + + + +++D
Sbjct: 19 IEAVLDVDRMRREVAELELQTGAPDLWDDVEAAQALTSKLSYMQGDLRRVEELRGRLED- 77
Query: 81 VTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L EM + D EA ++ L K + + E+ LLSG YD A+++I + A
Sbjct: 78 ---VGLLHEMAAEENDEATTAEAERELENLQKVIAELEVRTLLSGEYDSREALVTIRSEA 134
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ +Y T V + S EEAGIKSA V+ YAYG LS E+
Sbjct: 135 GGVDAADFAEMLMRMYLRWAERHKYPTEVYDVSYAEEAGIKSATFTVKVPYAYGTLSVEQ 194
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ V+IPE ++ + R+ G GGQ+VN
Sbjct: 195 GTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHVEIPENEIRVDVFRSSGPGGQSVN 253
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+THIPTG+ V C E+SQ+ N+ AL L+A+LLV+ ++++ +E+ ++G+
Sbjct: 254 TTDSAVRMTHIPTGIVVSCQNEKSQIQNRAAALRVLQARLLVVRQQEQKAEMDALKGEG- 312
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT HET + +V+DGE++ F+++ ++++
Sbjct: 313 -SSWGNQMRSYVLHPYQMVKDLRTEHETGNTAAVLDGEIDSFVEAGIRWR 361
>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
Length = 376
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/348 (42%), Positives = 226/348 (64%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
IR + ++QL+ E+AEL AA WD+ AQ L+ + + L F +++D
Sbjct: 19 IREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQGTLEKLQKFDQRIEDV 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V + E D D L EAA+ +++L L E++ LLSG +D+ AVI++ AGAGG
Sbjct: 79 ELLVSMGE--DEGDEDALNEAAAEVEKLKSELAALEISTLLSGEFDERSAVITVRAGAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA DWA ML RMY+RW E + YK ++ S E AG+KSA ++V YAYG LS E GT
Sbjct: 137 DDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNAPYAYGTLSVEAGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E++ + I E DL I R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDHIDIDENDLRIDVFRSSGPGGQSVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVRITH+PTGV V E+SQ+ N+ A+ L+++LL + E+ ++ K + GD +KA
Sbjct: 256 DSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQLKREEEEAQKKDLAGD-IKA 314
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV HPY++VKD+RTG+E ++ +V DG+++ F+++ ++++
Sbjct: 315 SWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFLEAGIRWR 362
>gi|148543602|ref|YP_001270972.1| peptide chain release factor 2 [Lactobacillus reuteri DSM 20016]
gi|184153010|ref|YP_001841351.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
gi|227363435|ref|ZP_03847559.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
gi|325681956|ref|ZP_08161474.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
gi|148530636|gb|ABQ82635.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
reuteri DSM 20016]
gi|183224354|dbj|BAG24871.1| peptide chain release factor 2 [Lactobacillus reuteri JCM 1112]
gi|227071535|gb|EEI09834.1| peptide chain release factor RF2 [Lactobacillus reuteri MM2-3]
gi|324978600|gb|EGC15549.1| peptide chain release factor RF2 [Lactobacillus reuteri MM4-1A]
Length = 332
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 215/329 (65%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ +AQ+ + +K+K + + + ++ D T ++L D L +E
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSLELLAV--EPDDDLQKEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQDW +MLLRMYVRWGE+
Sbjct: 60 EASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ G+EAGIKS + ++G A+GYL EKG HR+VR SPF+A G R TSF+
Sbjct: 120 GFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITHIPTG+ ER
Sbjct: 180 VDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
TG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 299 TGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
>gi|28210088|ref|NP_781032.1| peptide chain release factor 2 [Clostridium tetani E88]
gi|28202524|gb|AAO34969.1| bacterial peptide chain release factor 2 [Clostridium tetani E88]
Length = 325
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 214/325 (65%), Gaps = 11/325 (3%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEEAASI 104
FW++ AQE Q +KD++ + +++D++ +++L EE D + AG +
Sbjct: 6 FWEDIKRAQEVTQQEKLIKDRLEKFDSLENRIEDSLVLIELMKEEEDISSAG------EV 59
Query: 105 IKEL---NKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+KEL K ++ F + LLSG YD+ A++++ AG GGTDAQDW +MLLRMY RW EK+
Sbjct: 60 LKELVLLKKEIESFRIEVLLSGEYDRNNAIMTLHAGVGGTDAQDWTEMLLRMYTRWAEKK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
YK ++ G+EAGIKS +++ G +AYGYL EKG HRIVR SP+NA G RQTSF+
Sbjct: 120 GYKVDTLDFLPGDEAGIKSVTLKITGDFAYGYLKAEKGVHRIVRISPYNANGKRQTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
E++P L E+ I ++ L++ RA G GGQ+VNK E+AVRITHIPTG+ V+C ER
Sbjct: 180 LELIPELTEDQDIEIIDDD-LKVDTYRASGAGGQHVNKTESAVRITHIPTGIVVQCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ +N+ AL LKAKL+ + E + +I+ + G+ WG QIR+YVFHPY LVKD R
Sbjct: 239 SQHSNRDTALKMLKAKLVELKEAEHKEKIEDLTGELKDMGWGSQIRSYVFHPYNLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET ++ +VMDG+++ FI YLK
Sbjct: 299 TSAETGNLTAVMDGDIDLFINEYLK 323
>gi|365903499|ref|ZP_09441322.1| protein chain release factor B [Lactobacillus malefermentans KCTC
3548]
Length = 332
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 203/323 (62%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD++ AQ + D+K K + T +DD +++L MD D + E +
Sbjct: 6 FWDDQRSAQGLIDETNDLKKKFDDFHKLTTDLDDVNVLLELL--MDDPDDEMWTEFEEKL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L + L + L QLL+G YDK A++ I GAGGT++QDW MLLRMY RW EK +
Sbjct: 64 AKLQENLQAYRLAQLLNGQYDKNNAILEIHPGAGGTESQDWGSMLLRMYTRWSEKHHFAV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V+ G+ AGI S + ++G AYGYL EKG HR+VR SPF++ G R TSF+ +V+
Sbjct: 124 ETVDYQPGDVAGINSVTLLIKGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHTSFASVDVL 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L ++S+D++I DL + RA G GGQ+VNK +AVRITH PTG+ V +RSQL
Sbjct: 184 PEL-DDSVDIEINPADLRVDVYRASGAGGQHVNKTSSAVRITHEPTGIVVASQAQRSQLQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A++ LKAKL + E ++A E + G + WG QIR+YVFHPY +VKD RT E
Sbjct: 243 NRQTAMNMLKAKLYELEESKKAKEKAALEGVQLDIGWGSQIRSYVFHPYSMVKDHRTNQE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
T+++ VMDG+L+PFI +YL+++
Sbjct: 303 TANVQGVMDGDLDPFIDAYLQFQ 325
>gi|355681869|ref|ZP_09062157.1| peptide chain release factor 2 [Clostridium citroniae WAL-17108]
gi|354811280|gb|EHE95913.1| peptide chain release factor 2 [Clostridium citroniae WAL-17108]
Length = 338
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/337 (41%), Positives = 211/337 (62%), Gaps = 6/337 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ FWDN ++ ++ ++KD++ + + + DD ++++ E DA L+ E
Sbjct: 3 EPGFWDNPEKSTRMVREAKNLKDEVETFRELEQEYDDIQVMIQMGYE--ENDASLIPEIE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
++ + L++ + LLSG YD A++ + AGAGGT++ DW ML RMY RW EK+
Sbjct: 61 EMLSHFAETLEKMRMKLLLSGEYDANNAILRLNAGAGGTESCDWCSMLYRMYCRWAEKKG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+KT V++ G+EAGIKS +++ G AYGYL E G HR+VR SPFNA G RQTSF
Sbjct: 121 FKTEVLDFLDGDEAGIKSVTVQINGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
++MP + E+ P+ D+ I R+ G GGQ++NK +A+RITH PTG V C ERS
Sbjct: 181 DIMPDIEEDIDIEINPD-DIRIDTYRSSGAGGQHINKTSSAIRITHFPTGTVVTCQNERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK KA+ LK+KL ++ +E++A++ IRGD + WG QIR+YV PY +VKD RT
Sbjct: 240 QFQNKDKAMQMLKSKLFMLKQEEQAAKAAGIRGDVKENGWGSQIRSYVLQPYTMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 379
G E+ ++ +V+DG L+PFI +YL++ MSL + N
Sbjct: 300 GEESGNVDAVLDGGLDPFISAYLRW---MSLGCPNKN 333
>gi|322516704|ref|ZP_08069613.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
49124]
gi|322124737|gb|EFX96175.1| peptide chain release factor RF2 [Streptococcus vestibularis ATCC
49124]
Length = 337
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 226/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQDLNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS + EE +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 61 DDS----IQEELEETLEKLDKIMTSYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|405979658|ref|ZP_11038001.1| peptide chain release factor 2 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404392074|gb|EJZ87135.1| peptide chain release factor 2 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 374
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/352 (42%), Positives = 230/352 (65%), Gaps = 4/352 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E + A +L ++ +LE +A WD+ + AQE AL+ + +++ +T ++
Sbjct: 16 MENVLAVVQPDKLRSQIEDLEKQATAPDLWDDPSHAQEVTSALSHRQSELDRVTKMVDRI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD +V++ E A +LEEA + L + E+ LL G YD+ AVI+I +G
Sbjct: 76 DDLEAMVEMAGEDPEESAEILEEADGDLVTLKADISDLEIRTLLDGEYDERNAVITIRSG 135
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E
Sbjct: 136 AGGVDAADFAEILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVE 195
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQN 256
GTHR+VR SPF+ +G RQTSF+ EV+PL+ ES D ++IPE +L+I R+ G GGQ+
Sbjct: 196 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI--ESTDHIEIPENELKIDVFRSSGPGGQS 253
Query: 257 VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 316
VN ++AVR+THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD
Sbjct: 254 VNTTDSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD 313
Query: 317 AVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VKA WG Q+R+YV PY +VKD+RT E+ +V DG+++ FI + ++++
Sbjct: 314 -VKASWGDQMRSYVLQPYTMVKDLRTQFESGSPQNVFDGDIDGFINAGIRWR 364
>gi|429194272|ref|ZP_19186373.1| peptide chain release factor 2 [Streptomyces ipomoeae 91-03]
gi|428670028|gb|EKX68950.1| peptide chain release factor 2 [Streptomyces ipomoeae 91-03]
Length = 368
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 236/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L++L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLEKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA + + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLAVLFEMAEEEDDPDTRA--EAEAELASVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E+S V+I E +L I
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDESELRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVRITH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+R +E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRNNYEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|357056769|ref|ZP_09117798.1| peptide chain release factor 2 [Clostridium clostridioforme
2_1_49FAA]
gi|355379608|gb|EHG26764.1| peptide chain release factor 2 [Clostridium clostridioforme
2_1_49FAA]
Length = 338
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 214/334 (64%), Gaps = 6/334 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ ++ ++ ++KD+++ + + +D ++++ E D+ L+ E ++
Sbjct: 6 FWDDPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYE--ENDSSLIPEIEEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++ + L+ + LLSG YD A++ + AGAGGT++ DW +L RMY RW E + +K
Sbjct: 64 EQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKGFKA 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ GEEAGIKS ++++G AYGYL E G HR+VR SPFN+ G RQTSF +VM
Sbjct: 124 HVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +D+++ +D+ + R+ G GGQ++NK +A+RITH PTG+ V C ERSQ
Sbjct: 184 PNI-EEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKLL++ +E++A++ IRGD WG QIR+YV PY +VKD RTG E
Sbjct: 243 NKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTGEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 379
+ ++ +V+DG ++ FI +YL++ MSL D N
Sbjct: 303 SGNVDAVLDGAIDNFISAYLRW---MSLGCPDKN 333
>gi|423519840|ref|ZP_17496321.1| peptide chain release factor 2 [Bacillus cereus HuA2-4]
gi|401157419|gb|EJQ64817.1| peptide chain release factor 2 [Bacillus cereus HuA2-4]
Length = 325
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 210/325 (64%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 59 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
R+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 RFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH+PT V C ER
Sbjct: 179 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSER 237
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 238 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 297
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE+ PFI +YL+
Sbjct: 298 TNTEVGNVQAVMDGEINPFIDAYLR 322
>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|416999056|ref|ZP_11939725.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|333977209|gb|EGL78068.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
Length = 330
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 221/332 (66%), Gaps = 3/332 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FWDN +A+E Q T +K+ + + ++DA ++++ +D D + E
Sbjct: 2 SDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMA--IDEDDLSMESEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K++ + L++ E+ LLSG YD A+++ AGAGGT+AQDW ML+RMY+RW EK
Sbjct: 60 KEYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKS 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ ++++ G+EAGIKSA V+G A+GYL EKG HR+VR SPF+A R TSF+
Sbjct: 120 GFSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAA 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V+C +R
Sbjct: 180 VDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY LVKD R
Sbjct: 239 SQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
T ET ++ +VMDG L+PFI+ +LK + ++++
Sbjct: 299 TSVETGNVQAVMDGNLDPFIEGFLKKEANLTI 330
>gi|257893004|ref|ZP_05672657.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
gi|257829383|gb|EEV55990.1| peptide chain release factor 2 [Enterococcus faecium 1,231,408]
Length = 338
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 218/337 (64%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++AE E K A+ FWD+ AQ+ + K+ + ++++ +V++ +E
Sbjct: 1 MEEDIAEAEAKMAEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVEMLQE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DA + EEA + I L++ + +EL+ LL GPYD+ A++ + GAGGT++QDW M
Sbjct: 61 --EPDAAMQEEAETRINALDEKMKTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW E+ Y+ ++ G+EAGIKS + ++G A+GYL EKG HR+VR SPF
Sbjct: 119 LLRMYTRWAEQHGYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKSEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF +VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+
Sbjct: 179 DSAKRRHTSFCSVDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHL 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG V +RSQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+Y
Sbjct: 238 PTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT ET ++ +VMDG+L+ FI YLK
Sbjct: 298 VFHPYSMVKDHRTNVETGNVQAVMDGDLDLFIDGYLK 334
>gi|374852036|dbj|BAL54979.1| peptide chain release factor RF-2 [uncultured Chloroflexi
bacterium]
Length = 311
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/310 (46%), Positives = 204/310 (65%), Gaps = 6/310 (1%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
++ L D+++ + F+ ++ DA+ + +L +E L EE + L + +Q
Sbjct: 1 MRRLADLRETVETWQAFQQRLHDALELCQLEDE------SLREELEKEVHSLEEEFEQKS 54
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
+LSGPYD A+++I AGAGGTD+QDWA ML+RMY+RW E++ Y+T +++ + GEEA
Sbjct: 55 FAAMLSGPYDAGDALLAIHAGAGGTDSQDWAAMLMRMYLRWAERRGYETEILDMTEGEEA 114
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKS I V G+YAYGYL EKG HR+VR SPF+A R TSF+ EV+P + + V
Sbjct: 115 GIKSVTIAVNGKYAYGYLRSEKGVHRLVRLSPFDAAHRRHTSFAMVEVLPQIAMDDPVVV 174
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
I +DL+I RA GGQNV K TAVRITHIPTG+ V C ERSQ NK A+ L+A
Sbjct: 175 IDPKDLKIDVYRASSAGGQNVQKNATAVRITHIPTGIVVTCENERSQTQNKETAMRILRA 234
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
+L + ++ EI +RG+ VKAEWG QIR+YV HPY++VKD RT +ET + +V+DGE
Sbjct: 235 RLFELKRAEKEEEIALLRGEYVKAEWGNQIRSYVLHPYQMVKDHRTDYETGNTQAVLDGE 294
Query: 357 LEPFIKSYLK 366
++ F+ +YL+
Sbjct: 295 IDDFMIAYLR 304
>gi|163942871|ref|YP_001647755.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
gi|229014346|ref|ZP_04171465.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
gi|229063835|ref|ZP_04200139.1| Peptide chain release factor 2 [Bacillus cereus AH603]
gi|229135993|ref|ZP_04264753.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
gi|229169892|ref|ZP_04297588.1| Peptide chain release factor 2 [Bacillus cereus AH621]
gi|423369152|ref|ZP_17346583.1| peptide chain release factor 2 [Bacillus cereus VD142]
gi|423490324|ref|ZP_17467006.1| peptide chain release factor 2 [Bacillus cereus BtB2-4]
gi|423496048|ref|ZP_17472692.1| peptide chain release factor 2 [Bacillus cereus CER057]
gi|423497158|ref|ZP_17473775.1| peptide chain release factor 2 [Bacillus cereus CER074]
gi|423513371|ref|ZP_17489901.1| peptide chain release factor 2 [Bacillus cereus HuA2-1]
gi|423595633|ref|ZP_17571663.1| peptide chain release factor 2 [Bacillus cereus VD048]
gi|423597567|ref|ZP_17573567.1| peptide chain release factor 2 [Bacillus cereus VD078]
gi|423660014|ref|ZP_17635183.1| peptide chain release factor 2 [Bacillus cereus VDM022]
gi|423670701|ref|ZP_17645730.1| peptide chain release factor 2 [Bacillus cereus VDM034]
gi|423673072|ref|ZP_17648011.1| peptide chain release factor 2 [Bacillus cereus VDM062]
gi|163865068|gb|ABY46127.1| peptide chain release factor 2 [Bacillus weihenstephanensis KBAB4]
gi|228613606|gb|EEK70735.1| Peptide chain release factor 2 [Bacillus cereus AH621]
gi|228647451|gb|EEL03526.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST196]
gi|228716472|gb|EEL68176.1| Peptide chain release factor 2 [Bacillus cereus AH603]
gi|228746946|gb|EEL96830.1| Peptide chain release factor 2 [Bacillus mycoides DSM 2048]
gi|401078282|gb|EJP86597.1| peptide chain release factor 2 [Bacillus cereus VD142]
gi|401149884|gb|EJQ57351.1| peptide chain release factor 2 [Bacillus cereus CER057]
gi|401162878|gb|EJQ70231.1| peptide chain release factor 2 [Bacillus cereus CER074]
gi|401221527|gb|EJR28141.1| peptide chain release factor 2 [Bacillus cereus VD048]
gi|401239099|gb|EJR45531.1| peptide chain release factor 2 [Bacillus cereus VD078]
gi|401294988|gb|EJS00613.1| peptide chain release factor 2 [Bacillus cereus VDM034]
gi|401303675|gb|EJS09236.1| peptide chain release factor 2 [Bacillus cereus VDM022]
gi|401311172|gb|EJS16480.1| peptide chain release factor 2 [Bacillus cereus VDM062]
gi|402430003|gb|EJV62085.1| peptide chain release factor 2 [Bacillus cereus BtB2-4]
gi|402445615|gb|EJV77484.1| peptide chain release factor 2 [Bacillus cereus HuA2-1]
Length = 326
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 210/325 (64%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
R+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 RFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH+PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE+ PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEINPFIDAYLR 323
>gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1]
gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1]
Length = 327
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/321 (45%), Positives = 207/321 (64%), Gaps = 3/321 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW+++ +AQ + +K+ +N D + ++ ++L +E DA L EE
Sbjct: 6 FWNDQQQAQGVINEANGLKELVNEYKDMQEMQENLEVTLELVKE--ENDAELQEELVEET 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K+LNK L+++EL LLS P+DK A++ + GAGGT++QDW MLLRMY RW EK+ +K
Sbjct: 64 KDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKGFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF EVM
Sbjct: 124 ETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P EE +++ I EDL+I RA G GGQ++N ++AVRITH PTGV V C ERSQ+
Sbjct: 184 PEFNEE-IEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQIK 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ LKAKL E++ E+ +IRG+ WG QIR+YVFHPY +VKD RT E
Sbjct: 243 NREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTNTE 302
Query: 346 TSDIVSVMDGELEPFIKSYLK 366
++ +VMDG++ FI +YL+
Sbjct: 303 MGNVQAVMDGDINGFINAYLR 323
>gi|377556378|ref|ZP_09786085.1| Peptide chain release factor 2 [Lactobacillus gastricus PS3]
gi|376168428|gb|EHS87197.1| Peptide chain release factor 2 [Lactobacillus gastricus PS3]
Length = 332
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 211/325 (64%), Gaps = 3/325 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ + +K + + +T ++D + + L DA L +E + +
Sbjct: 6 FWDDNQQAQKLIDETNQLKGRRDTFLSLQTAVNDLIDLRDLLSL--EADADLEKELENNL 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ +++++L QLL GPYD A++ I GAGGT+AQDW +MLLRMY RW E+ +Y+
Sbjct: 64 RRTTSEVEKYQLNQLLDGPYDANNAILEIHPGAGGTEAQDWGEMLLRMYTRWAEQHQYQV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+ GEEAGIKS + ++G AYG+L EKG HR+VR SPF++ R TSF+ +VM
Sbjct: 124 EIANYEAGEEAGIKSVTLIIKGHNAYGFLHPEKGVHRLVRISPFDSANRRHTSFASIDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++S+++ I DL + R+ G GGQ++NK ++A+RITH+PTG+ ERSQL
Sbjct: 184 PEM-DDSIEIDINSADLRVDTFRSSGAGGQHINKTDSAIRITHLPTGIVTSSQAERSQLQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ LK+KL + +E++A+E +I G+ ++ WG QIR+YV HPY LVKD RTG+E
Sbjct: 243 NRETAMRMLKSKLYELEQEKQAAERAKIAGEQLENGWGSQIRSYVLHPYSLVKDTRTGYE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
T D V+DG+L+PFI ++LK++ S
Sbjct: 303 THDTQGVLDGDLDPFINAFLKWQLS 327
>gi|289432457|ref|YP_003462330.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
gi|288946177|gb|ADC73874.1| hypothetical protein DehalGT_0507 [Dehalococcoides sp. GT]
Length = 361
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 214/336 (63%), Gaps = 5/336 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +++ FW ++ AQ+ ++ L K L + +++D + L+ E
Sbjct: 25 ELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELAVLSRE- 83
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L E I L LD E+ SG YD A++++ AGAGG ++QDWA ML
Sbjct: 84 ---DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDWAGML 140
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRM++RW K+ + ++++SLGEEAGIKSA +++EG YAYG+L E G HR++R SPF+
Sbjct: 141 LRMFMRWAAKKGFGMEILDQSLGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFD 200
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSF+ E+MP E+S+D+ I ED++I R+ G GGQNV KV TAVR+THIP
Sbjct: 201 ADHARHTSFALVEIMPE-AEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIP 259
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
+G+ V ERSQ N+ A+ L +KLL + +RA E +++G+ + AEWG QIR+YV
Sbjct: 260 SGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIRSYV 319
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
HPYK+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 320 LHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 355
>gi|306825598|ref|ZP_07458937.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431959|gb|EFM34936.1| peptide chain release factor RF2 [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 329
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMANYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLFFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E S + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVSQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|322372865|ref|ZP_08047401.1| peptide chain release factor 2 [Streptococcus sp. C150]
gi|419707767|ref|ZP_14235245.1| Peptide chain release factor 2 [Streptococcus salivarius PS4]
gi|321277907|gb|EFX54976.1| peptide chain release factor 2 [Streptococcus sp. C150]
gi|383282479|gb|EIC80465.1| Peptide chain release factor 2 [Streptococcus salivarius PS4]
Length = 337
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 225/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D+ + EE +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 61 ----DSSVQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|333394246|ref|ZP_08476065.1| peptide chain release factor 2 [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 332
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 212/325 (65%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD++A+AQ+ + A +K K + + + DD +L E D D + E
Sbjct: 2 AEPGFWDDQAQAQKLIDATNGLKAKYDSFQQLQQQYDDLTVSAELLAEED--DPQIAAEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ I +L + + Q+EL LL+GPYD A++ I GAGGT++QDW +MLLRMY+RW E+
Sbjct: 60 DTGITKLQQQMQQYELGLLLNGPYDSNNAILEIHPGAGGTESQDWGEMLLRMYMRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ V+ GEEAGIKS + ++G AYGYL E+G HR+VR SPF+A G R TSF+
Sbjct: 120 HFTVETVDYQAGEEAGIKSVTLLIKGHNAYGYLRSERGVHRLVRISPFDAAGRRHTSFTS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L +++++V+I +DL + RA G GGQ+VNK +AVRITH+PTG+ V ER
Sbjct: 180 VDVMPEL-DDTVNVEINSDDLRVDVYRASGAGGQHVNKTSSAVRITHLPTGIVVASQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ A++ L+AKL E++ E QI+G+ + WG QIR+YVF PY ++KD R
Sbjct: 239 SQLQNRQTAMNMLRAKLYQRELEEKEKERAQIQGEQAEIGWGSQIRSYVFQPYTMIKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T +ET + +V+DG+L+PFI +YL+
Sbjct: 299 TNYETGNGQAVLDGDLDPFIDAYLQ 323
>gi|332686413|ref|YP_004456187.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
gi|332370422|dbj|BAK21378.1| peptide chain release factor 2 [Melissococcus plutonius ATCC 35311]
Length = 328
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 214/327 (65%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+N +AQ+ + K+K ++++ + +L +++D D + E
Sbjct: 2 ADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYEL-QQVD-FDEAIQTEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
IK+L K L +EL LL+GPYDK A++ GAGGT++QDW MLLRMY+RW E +
Sbjct: 60 IQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ V++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 NFQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
++MP L +E++++ I +DL++ RA G GGQ++NK E+AVRITHIPT V +R
Sbjct: 180 VDIMPEL-DETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+ LK+KL + E++A E ++RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET ++ +VMDGE++ FI +YLK++
Sbjct: 299 TNMETGNVQAVMDGEIDNFIDAYLKWQ 325
>gi|225868809|ref|YP_002744757.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus]
gi|225702085|emb|CAW99717.1| peptide chain release factor 2 [Streptococcus equi subsp.
zooepidemicus]
Length = 338
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 220/339 (64%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE K + FW++ AQ+T Q L ++K + + D+ +++ +E
Sbjct: 1 MEEDIALLENKMTEPDFWNDNMAAQKTSQELNELKLTYQTFHNMQELSDETELYLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS EE + + L++ L +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 61 DDSVK----EELEASLTRLSQMLASYEMTLLLSEPYDHSNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY R+G + +K ++ G+EAGIKS + +EG AYG+L E G HR+VR SPF
Sbjct: 117 LFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSIEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFVSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|386344808|ref|YP_006040972.1| peptide chain release factor 2 [Streptococcus thermophilus JIM
8232]
gi|339278269|emb|CCC20017.1| peptide chain release factor 2 [Streptococcus thermophilus JIM
8232]
Length = 337
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 224/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + K D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWA+M
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMDQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|55821157|ref|YP_139599.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
18311]
gi|55823068|ref|YP_141509.1| peptide chain release factor 2 [Streptococcus thermophilus
CNRZ1066]
gi|116627872|ref|YP_820491.1| peptide chain release factor 2 [Streptococcus thermophilus LMD-9]
gi|55737142|gb|AAV60784.1| peptide chain release factor 2 [Streptococcus thermophilus LMG
18311]
gi|55739053|gb|AAV62694.1| peptide chain release factor 2 [Streptococcus thermophilus
CNRZ1066]
gi|116101149|gb|ABJ66295.1| bacterial peptide chain release factor 2 (bRF-2) [Streptococcus
thermophilus LMD-9]
Length = 337
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 224/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + K D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWA+M
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDAYLKWR 334
>gi|315612838|ref|ZP_07887749.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
49296]
gi|417916375|ref|ZP_12559957.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
SK95]
gi|417935343|ref|ZP_12578662.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
F0392]
gi|418975231|ref|ZP_13523140.1| peptide chain release factor 2 [Streptococcus oralis SK1074]
gi|419779656|ref|ZP_14305526.1| peptide chain release factor 2 [Streptococcus oralis SK10]
gi|419781250|ref|ZP_14307082.1| peptide chain release factor 2 [Streptococcus oralis SK100]
gi|419783212|ref|ZP_14309003.1| peptide chain release factor 2 [Streptococcus oralis SK610]
gi|315314948|gb|EFU62989.1| peptide chain release factor RF2 [Streptococcus sanguinis ATCC
49296]
gi|340769836|gb|EGR92354.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
F0392]
gi|342829817|gb|EGU64159.1| peptide chain release factor 2 [Streptococcus mitis bv. 2 str.
SK95]
gi|383182366|gb|EIC74921.1| peptide chain release factor 2 [Streptococcus oralis SK610]
gi|383184642|gb|EIC77156.1| peptide chain release factor 2 [Streptococcus oralis SK100]
gi|383186044|gb|EIC78520.1| peptide chain release factor 2 [Streptococcus oralis SK10]
gi|383348602|gb|EID26561.1| peptide chain release factor 2 [Streptococcus oralis SK1074]
Length = 329
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|229087663|ref|ZP_04219789.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
gi|228695624|gb|EEL48483.1| Peptide chain release factor 2 [Bacillus cereus Rock3-44]
Length = 327
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 214/329 (65%), Gaps = 7/329 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQTVINEANALKD---MVGKFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKSLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDGE++PFI +YL+ + S
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLRSRIS 327
>gi|456385063|gb|EMF50641.1| prfB protein [Streptomyces bottropensis ATCC 25435]
Length = 368
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 237/367 (64%), Gaps = 12/367 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADVAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLGVLFEMAEEEDDPDTRA--EAESELTSVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT + E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLL-----D 296
Query: 306 RASEIKQIRGDAVKAE----WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
R + +Q R DA+K + WG Q+R+YV HPY++VKD+RT HE + +V +GE+E F+
Sbjct: 297 RRRQEEQARMDALKGDGGNSWGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIEGFL 356
Query: 362 KSYLKYK 368
++ ++++
Sbjct: 357 EAGIRWR 363
>gi|403746666|ref|ZP_10955059.1| hypothetical protein URH17368_2375 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120525|gb|EJY54897.1| hypothetical protein URH17368_2375 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 340
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/330 (45%), Positives = 215/330 (65%), Gaps = 8/330 (2%)
Query: 42 ADSSFWDNRAEAQET---LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
A+ +FWD++ +AQ+ + AL V DK+N LT DA ++L +E + D L
Sbjct: 2 AEPNFWDDQEKAQKIIGEMNALKSVVDKMNELTSLHA---DAEVALQLAQEENDMD--LF 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
EA + +L +D FEL +LSG YD A++ + GAGGT++QDWA +LLRMY RW
Sbjct: 57 AEANEMATKLKDGIDSFELQLMLSGDYDANNAIVELHPGAGGTESQDWASILLRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E YK V++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 117 EDHGYKVEVLDYLPGDEAGIKSVTLRIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ +V+P + E+ ++I E+L I R+ G GGQ+VN ++AVRITH+PTG+ V C
Sbjct: 177 FASVDVIPEIAEDDTSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHLPTGIVVSCQ 236
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ A+ LKA+L +E+R +E+ ++RG+ + WG QIR+YVFHPY LVK
Sbjct: 237 SERSQIQNRAVAMELLKARLAAKRQEEREAELAELRGEQKEIAWGSQIRSYVFHPYSLVK 296
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
D RT E ++ +V+DG L+PFI +YL+++
Sbjct: 297 DHRTNQEVGNVQAVVDGLLDPFIHAYLRWQ 326
>gi|385263221|ref|ZP_10041313.1| peptide chain release factor 2 [Streptococcus sp. SK643]
gi|385188535|gb|EIF36020.1| peptide chain release factor 2 [Streptococcus sp. SK643]
Length = 329
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLVE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ EE + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VEEELVNQLTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G +K +++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNANGFKVEILDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|268611479|ref|ZP_06145206.1| hypothetical protein RflaF_18501 [Ruminococcus flavefaciens FD-1]
Length = 372
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 226/360 (62%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
LR ++ +EE+ ++ +K +AEL + A FWD+ +Q+ L+ ++ K
Sbjct: 7 LRVEMTGYRKEMEELADVLNIENAKKRVAELGDETAKEGFWDDLENSQKVLKEQKSLERK 66
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I ++D +T+++L+ +++ D +EE + + L+ +L+ LL+G YD
Sbjct: 67 IEKFNKLNDSLEDLITLIELS--IEAEDESDIEEIKAEAESFKSKLEDEKLSTLLTGEYD 124
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A+++ AGAGGT+AQDWA+ML RMY RW E+ +K +++ G+EAG+KSA I +E
Sbjct: 125 GANAILTFHAGAGGTEAQDWAEMLYRMYNRWAERHEFKVELLDYLDGDEAGMKSASILIE 184
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGY+ E G HR+VR SPF+A+G R TSF+ EVMP L ++S++V I ED+E+
Sbjct: 185 GENAYGYMKSESGVHRLVRVSPFDAQGRRHTSFAALEVMPEL-DDSIEVDIRPEDIEMEV 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+ G GGQ VNK +AVR+ H PTG+ V C +RSQ NK A+ L++KL+ I E +
Sbjct: 244 YRSSGAGGQKVNKTSSAVRLIHKPTGIVVSCQTQRSQYQNKDYAMKMLRSKLIEIKEREH 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+I+ I+G + WG QIR+YVF PY LVKD RTG E +I +VMDG+++ FI +YLK
Sbjct: 304 LEKIEDIKGVQNQIAWGSQIRSYVFMPYTLVKDTRTGFENGNIQAVMDGDIDGFINAYLK 363
>gi|423336076|ref|ZP_17313827.1| peptide chain release factor 2 [Lactobacillus reuteri ATCC 53608]
gi|337729279|emb|CCC04406.1| peptide chain release factor 2 [Lactobacillus reuteri ATCC 53608]
Length = 332
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 215/329 (65%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ +AQ+ + +K+K + + + ++ D T ++L D L ++
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAV--EPDDDLQKDF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQDW +MLLRMYVRWGE+
Sbjct: 60 EASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ G+EAGIKS + ++G A+GYL EKG HR+VR SPF+A G R TSF+
Sbjct: 120 GFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITHIPTG+ ER
Sbjct: 180 VDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
TG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 299 TGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
>gi|227545120|ref|ZP_03975169.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
gi|338203931|ref|YP_004650076.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
gi|227184908|gb|EEI64979.1| peptide chain release factor RF2 [Lactobacillus reuteri CF48-3A]
gi|336449171|gb|AEI57786.1| peptide chain release factor RF2 [Lactobacillus reuteri SD2112]
Length = 332
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 215/329 (65%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A FW++ +AQ+ + +K+K + + + ++ D T ++L D L ++
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQISDLETSLELLAV--EPDDDLQKDF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQDW +MLLRMY+RWGE+
Sbjct: 60 EASFTNTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYIRWGEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ G+EAGIKS + ++G A+GYL EKG HR+VR SPF+A G R TSF+
Sbjct: 120 AFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++S++V I DL + R+ G GGQ++NK E+AVRITHIPTG+ ER
Sbjct: 180 VDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKTESAVRITHIPTGIVTSSQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDNR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
TG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 299 TGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
>gi|433447236|ref|ZP_20410869.1| peptide chain release factor B [Anoxybacillus flavithermus
TNO-09.006]
gi|432000070|gb|ELK20976.1| peptide chain release factor B [Anoxybacillus flavithermus
TNO-09.006]
Length = 329
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/327 (44%), Positives = 212/327 (64%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A S FWD++ AQ + +KD + + + ++ +L +E D L +E
Sbjct: 2 AASDFWDDQKAAQAVISEANALKDLVGEFRSLEERFENLEVTYELVKE--EPDEELQKEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ K+L+K +FEL LL+ PYDK A++ + GAGGT++QDWA MLLRMY RW EK+
Sbjct: 60 VAEAKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
YK ++ GEEAGIKS + ++G AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 120 GYKVETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P ++++++ + +++++ R+ G GGQ+VN ++AVRITHIPTG+ V C ER
Sbjct: 180 CEVVPEF-DDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ KA++ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T E ++ +VMDGE++ FI +YL+ K
Sbjct: 299 TNTEVGNVQAVMDGEIDVFIDAYLRSK 325
>gi|194468150|ref|ZP_03074136.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
gi|194453003|gb|EDX41901.1| peptide chain release factor 2 [Lactobacillus reuteri 100-23]
Length = 332
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 217/330 (65%), Gaps = 5/330 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEE 100
A FW++ +AQ+ + +K+K + + + ++ D T ++L T E D L +
Sbjct: 2 AQPDFWNDNEQAQKVIAENNILKEKRDTFVNLRDQIGDLETSIELLTVEPDDD---LQRD 58
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
+ KAL+Q+ LTQLL G YD + A++ I GAGGT+AQDW +MLLRMYVRWGE+
Sbjct: 59 FEVSFTKTQKALEQYRLTQLLDGEYDAKNAILEIHPGAGGTEAQDWGEMLLRMYVRWGEQ 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ G+EAGIKS + ++G A+GYL EKG HR+VR SPF+A G R TSF+
Sbjct: 119 HGFSVETASYEAGDEAGIKSVTLLIKGHNAFGYLRSEKGVHRLVRISPFDAAGRRHTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
+VMP L ++S++V I DL + R+ G GGQ++NK+E+AVRITHIPTG+ E
Sbjct: 179 SVDVMPEL-DDSVEVDIDPSDLRVDTFRSSGAGGQHINKIESAVRITHIPTGIVTSSQAE 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL N++ A++ LK+KL + EE++A + +I G+ + WG QIR+YVFHPY LVKD
Sbjct: 238 RSQLQNRVTAMNMLKSKLYELEEEKKAKKRAEIEGEQLDIGWGSQIRSYVFHPYTLVKDN 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RTG+ET + +VMDG+L+PFI ++L++K S
Sbjct: 298 RTGYETHNGQAVMDGDLDPFIDAFLQWKLS 327
>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
Length = 372
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 229/343 (66%), Gaps = 6/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L E+AE+ +A+ SFWD+ AQ+ L+ + + L F ++DDA I+++
Sbjct: 25 LDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQGTLEKLEKFGERIDDAELIIEM 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E+ D+ + EA +K+L+ L + E++ LL+ YD+ AV+++ +GAGG DA DW
Sbjct: 85 SEDEGDEDSKV--EAERDLKKLHDQLAELEISTLLNHEYDERSAVVTVRSGAGGDDATDW 142
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A ML+RMYVRW E + Y + ++ S E AGIKSA I+V YAYG LS E GTHR+VR
Sbjct: 143 AQMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNAPYAYGTLSVEAGTHRLVRI 202
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+ +G RQTSF+ EV+PL+ ES D V+I E DL I R+ G GGQ+VN ++AVR
Sbjct: 203 SPFDNQGRRQTSFAAVEVVPLI--ESTDHVEIDENDLRIDVYRSSGPGGQSVNTTDSAVR 260
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITH PTGV V E+SQ+ N+ A+ L+++LL + ++ A+E K++ GD +KA WG Q
Sbjct: 261 ITHAPTGVVVSMQNEKSQIQNREAAMRVLQSRLLDLKRKEEAAEKKELAGD-IKASWGDQ 319
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+R+YV HPY++VKD+RTG+E ++ +V DG+L+ I++ ++++
Sbjct: 320 MRSYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLIEAGIRWR 362
>gi|217967791|ref|YP_002353297.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
gi|217336890|gb|ACK42683.1| peptide chain release factor 2 [Dictyoglomus turgidum DSM 6724]
Length = 330
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 214/319 (67%), Gaps = 6/319 (1%)
Query: 47 WDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIK 106
WDN + + L ++ +I KT +++ L EE D E +K
Sbjct: 8 WDNSEKVKPILTKFNKLQKEIESWEKLKTDIEELSEWKDLLEEGDEYKE----EFEKKLK 63
Query: 107 ELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTR 166
E+ K+L FE+ +L P+D+ AV+S+ AG GGTDAQDW ++LLRMY+RW E++ Y+ +
Sbjct: 64 EVEKSLKNFEIEMVLQDPHDEANAVLSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVK 123
Query: 167 VVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMP 226
+++ S GEEAGIKSA + +EG AYGYL GEKG HR+VR SPF+A R TSF+ EV+P
Sbjct: 124 ILDISPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIP 183
Query: 227 LLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLAN 286
LPE + ++I EDL+I RAGG GGQ+VNKVE+AVRITHIPTG+ V+C ERSQ AN
Sbjct: 184 ELPEST--IEIKPEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHAN 241
Query: 287 KIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHET 346
K AL LKA+L + E +R +I ++G+ + WG QIR+YVFHPY LVKD RTG E
Sbjct: 242 KEMALRVLKARLEELEERKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEI 301
Query: 347 SDIVSVMDGELEPFIKSYL 365
++ +V+DGE++PFI++YL
Sbjct: 302 GNVQAVIDGEIDPFIEAYL 320
>gi|385142948|emb|CCH23987.1| peptide chain release factor 2 [Corynebacterium glutamicum K051]
Length = 368
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 224/348 (64%), Gaps = 6/348 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
Q++ + ELE +AAD S WD+ AQ+ L+ V+ ++ +TD + +++D +V+L
Sbjct: 26 QEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE D D + EE + +L +D E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 86 EEEDG-DTSIAEEE---LADLRSLIDALEVKTMLSGEYDTREAVINIRSGAGGVDAADWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY RW EK +K + + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 142 EMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ D+ + R+ G GGQ+VN ++AVR+T
Sbjct: 202 PFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 261 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL-GAGGNASWGNQMR 319
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+YV HPY++VKD+RT E +D V+DG+++ +++ ++++ + S SA
Sbjct: 320 SYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWRMAESQSA 367
>gi|417809962|ref|ZP_12456643.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
gi|335350886|gb|EGM52382.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
Length = 355
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 217/342 (63%), Gaps = 2/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEQGFWDDQEKAQEVIAENNDLKAKFETFHELEESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++QDW
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RW + +K V+ G++AGIKS + +EG+ AYGYL E+G HR+VR
Sbjct: 128 GSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+
Sbjct: 188 SPFDSAGRRHTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRL 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
HIPTG+ V +RSQ N+ A + L+AKL + E++ + I+G+ + WG QI
Sbjct: 247 IHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 307 RSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
>gi|335029031|ref|ZP_08522543.1| peptide chain release factor 2 [Streptococcus infantis SK1076]
gi|334269432|gb|EGL87849.1| peptide chain release factor 2 [Streptococcus infantis SK1076]
Length = 329
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 218/334 (65%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N KMD+ V++ + + D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E + EL++ + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VKDELVEKLDELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
Length = 330
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 221/332 (66%), Gaps = 3/332 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FWDN +A+E Q T +K+ + + ++DA ++++ +D D + E
Sbjct: 2 SDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMA--IDEDDLSMESEI 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K++ + L++ E+ LLSG YD A+++ AGAGGT+AQDW ML+RMY+RW EK
Sbjct: 60 KEYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKS 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ ++++ G+EAGIKSA V+G A+GYL EKG HR+VR SPF+A R TSF+
Sbjct: 120 GFSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAA 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V+C +R
Sbjct: 180 VDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY LVKD R
Sbjct: 239 SQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
T ET ++ +VMDG L+PF++ +LK + ++++
Sbjct: 299 TSVETGNVQAVMDGNLDPFVEGFLKKEANLTI 330
>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2 [Geobacillus thermodenitrificans
NG80-2]
gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
thermodenitrificans NG80-2]
Length = 327
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 214/329 (65%), Gaps = 7/329 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDS-TDAGLLE 99
A FWD++ AQ + +K+ + + D+ VT L EE D A L+E
Sbjct: 2 AAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA K+L K QFEL LL+ PYD+ A++ + GAGGT++QDWA MLLRMY RW E
Sbjct: 62 EA----KKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
K+ +K ++ GEEAG+KS + ++G AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 118 KKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EV+P + +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V C
Sbjct: 178 VSCEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQS 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY LVKD
Sbjct: 237 ERSQIKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYK 368
RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 297 HRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
>gi|406967614|gb|EKD92649.1| protein chain release factor B [uncultured bacterium]
Length = 374
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/346 (46%), Positives = 217/346 (62%), Gaps = 13/346 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L +LE+++ LE + FWDN +AQ + + K+ KT + D + L
Sbjct: 30 LPELEQKIKNLEEEMQAPGFWDNAQKAQHIAREQGILDRKVTAWKRLKTDLIDGQELATL 89
Query: 87 TEEMDSTDAGLLEEAASIIKE---LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
E + D EAA + K+ L K E+ LSG YD A++S+ A AGGTDA
Sbjct: 90 INEEEHPD-----EAAELKKQVEGLEKTYQDLEIQLYLSGKYDASPAMLSLHASAGGTDA 144
Query: 144 QDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
QDWA+MLLRMY R+ E + +K +VEKS GEEAGIKSA + VEG + YG L E G HR+
Sbjct: 145 QDWAEMLLRMYTRYAEGKGWKISLVEKSDGEEAGIKSATLRVEGDFTYGLLKEEAGMHRL 204
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VR SPFN K R+TSF EV+P + E+ ++QI +EDL+I RAGG GGQ VN ++A
Sbjct: 205 VRLSPFNVKHTRETSFCRVEVVPEI--EANELQIKDEDLKIDVFRAGGHGGQGVNTTDSA 262
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VRITH+PTG+ V+C ERSQL NK A+ L +KL+VI E+ R E+K I+G+ V+ WG
Sbjct: 263 VRITHLPTGIVVQCQNERSQLQNKELAMKSLTSKLVVIQEKNRLKELKDIKGEHVEGAWG 322
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE---LEPFIKSYLK 366
QIR+YV HPY++VKD RT ETS + +V+ G+ L+ FI+ LK
Sbjct: 323 TQIRSYVLHPYQMVKDHRTKKETSQVDAVLAGDPEALDGFIEESLK 368
>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
13032]
gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
13032]
gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
gi|418246625|ref|ZP_12873019.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
14067]
gi|24638152|sp|Q8NS78.1|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|166223627|sp|A4QCD3.1|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
13032]
gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
13032]
gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
gi|354509240|gb|EHE82175.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
14067]
Length = 368
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 224/348 (64%), Gaps = 6/348 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
Q++ + ELE +AAD S WD+ AQ+ L+ V+ ++ +TD + +++D +V+L
Sbjct: 26 QEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE D D + EE + +L +D E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 86 EEEDG-DTSIAEEE---LADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY RW EK +K + + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 142 EMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ D+ + R+ G GGQ+VN ++AVR+T
Sbjct: 202 PFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 261 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL-GAGGNASWGNQMR 319
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+YV HPY++VKD+RT E +D V+DG+++ +++ ++++ + S SA
Sbjct: 320 SYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWRMAESQSA 367
>gi|291542843|emb|CBL15953.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
bromii L2-63]
Length = 372
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 228/366 (62%), Gaps = 3/366 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M F L ++A ++++ + G++ + E+ +LE+KA + FWD+ ++Q+ LQ
Sbjct: 1 MVQFEELLLKLQALKPEIDDLSDALGMKGMLSEIQQLELKATEPGFWDDVEKSQKVLQRT 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K K+ K +D +++L E + E+ + N L++ L L
Sbjct: 61 GSLKGKVEAYEGLVAKYEDTHALIELANEEEDESLLEEAESEVEAVKEN--LEKQRLQTL 118
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+G YDK A+++ AG+GGT+AQDWA+ML RMY RW E +K + V+ G+EAG+KS
Sbjct: 119 LTGEYDKNNAILTFHAGSGGTEAQDWAEMLYRMYTRWAEAHGFKVKEVDYLDGDEAGLKS 178
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
AV+ VEG AYGYL E G HR+VR SPF++ G R TSFS EVMP + +++ +V IP E
Sbjct: 179 AVLLVEGENAYGYLKSEAGVHRLVRVSPFDSAGRRHTSFSSLEVMPEIAKDT-EVHIPPE 237
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+++ RA G GGQ VNK +AVR+THIPTG+ V ERSQ N+ A++ L +KL+
Sbjct: 238 DIKMDVYRASGAGGQKVNKTSSAVRLTHIPTGIVVASQVERSQYQNRDVAMNMLISKLVE 297
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I E + +I+ I+G + WG QIR+YVF PY +VKD RTG ET +I +VMDG+L+ F
Sbjct: 298 IKEREHLEKIEDIKGVQKEITWGSQIRSYVFMPYTMVKDHRTGFETGNIQAVMDGDLDGF 357
Query: 361 IKSYLK 366
I +YLK
Sbjct: 358 INAYLK 363
>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
gi|384513438|ref|YP_005708531.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
gi|384518787|ref|YP_005706092.1| peptide chain release factor 2 [Enterococcus faecalis 62]
gi|422685792|ref|ZP_16744005.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
gi|422692827|ref|ZP_16750842.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
gi|422696613|ref|ZP_16754569.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
gi|422701958|ref|ZP_16759798.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
gi|422706472|ref|ZP_16764170.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
gi|422708665|ref|ZP_16766193.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
gi|422720723|ref|ZP_16777332.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
gi|422722022|ref|ZP_16778599.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
gi|422727247|ref|ZP_16783690.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
gi|422735925|ref|ZP_16792191.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
gi|422739198|ref|ZP_16794381.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
gi|424673023|ref|ZP_18109966.1| peptide chain release factor 2 [Enterococcus faecalis 599]
gi|428767253|ref|YP_007153364.1| similar to peptide chain release factor 2, C-terminal [Enterococcus
faecalis str. Symbioflor 1]
gi|430361793|ref|ZP_19426870.1| peptide chain release factor RF2 [Enterococcus faecalis OG1X]
gi|430368471|ref|ZP_19428212.1| peptide chain release factor RF2 [Enterococcus faecalis M7]
gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
gi|402352833|gb|EJU87669.1| peptide chain release factor 2 [Enterococcus faecalis 599]
gi|427185426|emb|CCO72650.1| similar to peptide chain release factor 2, C-terminal [Enterococcus
faecalis str. Symbioflor 1]
gi|429512346|gb|ELA01954.1| peptide chain release factor RF2 [Enterococcus faecalis OG1X]
gi|429516227|gb|ELA05721.1| peptide chain release factor RF2 [Enterococcus faecalis M7]
Length = 327
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|379727562|ref|YP_005319747.1| peptide chain release factor 2 [Melissococcus plutonius DAT561]
gi|376318465|dbj|BAL62252.1| peptide chain release factor 2 [Melissococcus plutonius DAT561]
Length = 328
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 214/327 (65%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+N +AQ+ + K+K ++++ + +L +++D D + E
Sbjct: 2 ADVNFWNNAKQAQQIINETNREKEKYQQFNQLADELEELEIMYEL-QQVD-FDEAIQTEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
IK+L K L +EL LL+GPYDK A++ GAGGT++QDW MLLRMY+RW E +
Sbjct: 60 IQRIKQLEKQLKTYELALLLNGPYDKNNAIVEFHPGAGGTESQDWGSMLLRMYMRWAESR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ V++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 NFQIEVLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
++MP L +E++++ I +DL++ RA G GGQ++NK E+AVRITHIPT V +R
Sbjct: 180 IDIMPEL-DETIEIDINPDDLKVDTYRASGAGGQHINKTESAVRITHIPTSTVVSSQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+ LK+KL + E++A E ++RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMKTLKSKLYQLEMEKKAQESAELRGEQLEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET ++ +VMDGE++ FI +YLK++
Sbjct: 299 TNMETGNVQAVMDGEIDNFIDAYLKWQ 325
>gi|345854356|ref|ZP_08807192.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
gi|345634189|gb|EGX55860.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
Length = 368
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/367 (43%), Positives = 238/367 (64%), Gaps = 12/367 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKTEALRGRIDDLAVLFEMAEEEDDPDTRA--EAESELTAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQKGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL E+
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLL----ER 297
Query: 306 RASEIKQIRGDAVKAE----WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
R E +Q R DA+K + WG Q+R+YV HPY++VKD+RT E + +V +GE+E F+
Sbjct: 298 RRQE-EQARMDALKGDGGNSWGNQMRSYVLHPYQMVKDLRTEFEVGNPEAVFNGEIEGFL 356
Query: 362 KSYLKYK 368
++ ++++
Sbjct: 357 EAGIRWR 363
>gi|372324888|ref|ZP_09519477.1| Peptide chain release factor 2 [Oenococcus kitaharae DSM 17330]
gi|366983696|gb|EHN59095.1| Peptide chain release factor 2 [Oenococcus kitaharae DSM 17330]
Length = 356
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 213/342 (62%), Gaps = 2/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L+ +AE E K + +FWD+ AQ+ + +KD+ + + ++ D +++L
Sbjct: 10 LDALDASIAENEDKMSQPNFWDDNEAAQKVIDETNVLKDRRDSFLNLDKQVQDLTALIEL 69
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D D + E S I++ K L + L QLL+G YD A++ I G GGT++ DW
Sbjct: 70 LSEED--DPEMHAELESGIEKTEKDLQAYNLQQLLTGKYDANNAILEIHPGEGGTESADW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A L RMY RW + +K V + G+ AG+ SA + + G AYG+L EKG HR VR
Sbjct: 128 AGNLYRMYTRWAQSHDFKVEVTDYQSGDVAGLASATLRIIGHNAYGFLRSEKGVHRFVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF +VMP L ++ ++++I +D+++ R+GG GGQNVNKV TAVR+
Sbjct: 188 SPFDSAGRRHTSFVSIDVMPELDDDEIEIEIRPQDIKMDVYRSGGAGGQNVNKVSTAVRL 247
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V ER+Q N+ A+ LKAKL I E++RA E +I G ++ WG QI
Sbjct: 248 THLPTGIVVASQVERTQYGNRDIAMKMLKAKLYEIEEQKRAEEHAKISGTKLEVAWGSQI 307
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVF PY++VKD+R+G+ET D VMDG L+PFI +YL+++
Sbjct: 308 RSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLQWQ 349
>gi|418143566|ref|ZP_12780366.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13494]
gi|353809307|gb|EHD89567.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13494]
Length = 325
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 214/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ EAQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIEAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|270292341|ref|ZP_06198552.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
gi|270278320|gb|EFA24166.1| peptide chain release factor 2, programmed [Streptococcus sp. M143]
Length = 329
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVRDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
BAA-613]
gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
BAA-613]
Length = 339
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 213/334 (63%), Gaps = 6/334 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD ++ ++ ++KD+++ + + +D ++++ E D+ L+ E ++
Sbjct: 6 FWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYE--ENDSSLIPEIEEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++ + L+ + LLSG YD A++ + AGAGGT++ DW +L RMY RW E + +K
Sbjct: 64 EQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKGFKA 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ GEEAGIKS ++++G AYGYL E G HR+VR SPFN+ G RQTSF +VM
Sbjct: 124 HVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +D+++ +D+ + R+ G GGQ++NK +A+RITH PTG+ V C ERSQ
Sbjct: 184 PNI-EEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKLL++ +E++A++ IRGD WG QIR+YV PY +VKD RTG E
Sbjct: 243 NKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRTGEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 379
+ ++ +V+DG ++ FI +YL++ MSL D N
Sbjct: 303 SGNVDAVLDGAIDNFISAYLRW---MSLGCPDKN 333
>gi|403236255|ref|ZP_10914841.1| peptide chain release factor 2 [Bacillus sp. 10403023]
Length = 327
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 209/323 (64%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW+++ AQ + +KD++ T+ ++ +L +E DA L E I
Sbjct: 6 FWNDQNAAQTIINEANALKDQVVEFTNLHDSYENLELTYQLVKE--EPDADLQAELDEEI 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+EL+K++ +FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+ +K
Sbjct: 64 QELSKSVSEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF EVM
Sbjct: 124 ETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P ++ ++++I EDL+I RA G GGQ++N ++AVRITH+PT V C ERSQ+
Sbjct: 184 PEFSDD-IEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQNERSQIK 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ LK+KL + E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD RT E
Sbjct: 243 NREQAMKMLKSKLYQVEIEKQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ SVMDGE++ FI +YL+ K
Sbjct: 303 VGNTGSVMDGEIDLFIDAYLRSK 325
>gi|196249386|ref|ZP_03148084.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
gi|196211143|gb|EDY05904.1| peptide chain release factor 2 [Geobacillus sp. G11MC16]
Length = 327
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 214/329 (65%), Gaps = 7/329 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDS-TDAGLLE 99
A FWD++ AQ + +K+ + + D+ VT L EE D A L+E
Sbjct: 2 AAPGFWDDQKAAQAIISEANALKELVGEFESLAERFDNLEVTYELLKEEPDDELQAELVE 61
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
EA K+L K QFEL LL+ PYD+ A++ + GAGGT++QDWA MLLRMY RW E
Sbjct: 62 EA----KKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
K+ +K ++ GEEAG+KS + ++G AYGYL EKG HR+VR SPF+A G R TSF
Sbjct: 118 KKGFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EV+P + +++++++I E+L+I R+ G GGQ+VN ++AVRITH+PTG+ V C
Sbjct: 178 VSCEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQS 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ KA++ LKAKL E++ +E+ ++RG+ + WG QIR+YVFHPY LVKD
Sbjct: 237 ERSQIKNREKAINMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYK 368
RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 297 HRTNVEVGNVQAVMDGEIDVFIDAYLRAK 325
>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
gi|422714426|ref|ZP_16771152.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
gi|422715683|ref|ZP_16772399.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
gi|424676570|ref|ZP_18113441.1| peptide chain release factor 2 [Enterococcus faecalis ERV103]
gi|424681614|ref|ZP_18118401.1| peptide chain release factor 2 [Enterococcus faecalis ERV116]
gi|424683804|ref|ZP_18120554.1| peptide chain release factor 2 [Enterococcus faecalis ERV129]
gi|424686292|ref|ZP_18122960.1| peptide chain release factor 2 [Enterococcus faecalis ERV25]
gi|424690436|ref|ZP_18126971.1| peptide chain release factor 2 [Enterococcus faecalis ERV31]
gi|424695530|ref|ZP_18131913.1| peptide chain release factor 2 [Enterococcus faecalis ERV37]
gi|424696732|ref|ZP_18133073.1| peptide chain release factor 2 [Enterococcus faecalis ERV41]
gi|424699882|ref|ZP_18136093.1| peptide chain release factor 2 [Enterococcus faecalis ERV62]
gi|424703104|ref|ZP_18139238.1| peptide chain release factor 2 [Enterococcus faecalis ERV63]
gi|424707399|ref|ZP_18143383.1| peptide chain release factor 2 [Enterococcus faecalis ERV65]
gi|424716941|ref|ZP_18146239.1| peptide chain release factor 2 [Enterococcus faecalis ERV68]
gi|424720519|ref|ZP_18149620.1| peptide chain release factor 2 [Enterococcus faecalis ERV72]
gi|424724067|ref|ZP_18153016.1| peptide chain release factor 2 [Enterococcus faecalis ERV73]
gi|424733659|ref|ZP_18162214.1| peptide chain release factor 2 [Enterococcus faecalis ERV81]
gi|424744042|ref|ZP_18172347.1| peptide chain release factor 2 [Enterococcus faecalis ERV85]
gi|424750450|ref|ZP_18178514.1| peptide chain release factor 2 [Enterococcus faecalis ERV93]
gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
gi|402350713|gb|EJU85611.1| peptide chain release factor 2 [Enterococcus faecalis ERV116]
gi|402356582|gb|EJU91313.1| peptide chain release factor 2 [Enterococcus faecalis ERV103]
gi|402364169|gb|EJU98612.1| peptide chain release factor 2 [Enterococcus faecalis ERV129]
gi|402364279|gb|EJU98721.1| peptide chain release factor 2 [Enterococcus faecalis ERV31]
gi|402367826|gb|EJV02163.1| peptide chain release factor 2 [Enterococcus faecalis ERV25]
gi|402368225|gb|EJV02545.1| peptide chain release factor 2 [Enterococcus faecalis ERV37]
gi|402375381|gb|EJV09368.1| peptide chain release factor 2 [Enterococcus faecalis ERV62]
gi|402377061|gb|EJV10972.1| peptide chain release factor 2 [Enterococcus faecalis ERV41]
gi|402384997|gb|EJV18538.1| peptide chain release factor 2 [Enterococcus faecalis ERV65]
gi|402385109|gb|EJV18649.1| peptide chain release factor 2 [Enterococcus faecalis ERV63]
gi|402386289|gb|EJV19795.1| peptide chain release factor 2 [Enterococcus faecalis ERV68]
gi|402391272|gb|EJV24583.1| peptide chain release factor 2 [Enterococcus faecalis ERV81]
gi|402392990|gb|EJV26220.1| peptide chain release factor 2 [Enterococcus faecalis ERV72]
gi|402396048|gb|EJV29123.1| peptide chain release factor 2 [Enterococcus faecalis ERV73]
gi|402399465|gb|EJV32337.1| peptide chain release factor 2 [Enterococcus faecalis ERV85]
gi|402406749|gb|EJV39295.1| peptide chain release factor 2 [Enterococcus faecalis ERV93]
Length = 327
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
UCC118]
gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 355
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 216/342 (63%), Gaps = 2/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++QDW
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RW + +K V+ G++AGIKS + +EG+ AYGYL E+G HR+VR
Sbjct: 128 GSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+
Sbjct: 188 SPFDSAGRRHTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRL 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
HIPTG+ V +RSQ N+ A + L+AKL + E++ + I+G+ + WG QI
Sbjct: 247 IHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 307 RSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
>gi|47567398|ref|ZP_00238111.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47568468|ref|ZP_00239168.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47569292|ref|ZP_00239977.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|222098640|ref|YP_002532698.1| peptide chain release factor 2 [Bacillus cereus Q1]
gi|228936472|ref|ZP_04099270.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228988409|ref|ZP_04148500.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229141914|ref|ZP_04270440.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
gi|229158750|ref|ZP_04286808.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
gi|375287196|ref|YP_005107635.1| peptide chain release factor 2 [Bacillus cereus NC7401]
gi|423355664|ref|ZP_17333288.1| peptide chain release factor 2 [Bacillus cereus IS075]
gi|423375271|ref|ZP_17352608.1| peptide chain release factor 2 [Bacillus cereus AND1407]
gi|423572129|ref|ZP_17548342.1| peptide chain release factor 2 [Bacillus cereus MSX-A12]
gi|47554063|gb|EAL12429.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47554859|gb|EAL13210.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|47556019|gb|EAL14357.1| peptide chain release factor 2 [Bacillus cereus G9241]
gi|221242699|gb|ACM15409.1| peptide chain release factor [Bacillus cereus Q1]
gi|228624734|gb|EEK81503.1| Peptide chain release factor 2 [Bacillus cereus ATCC 4342]
gi|228641529|gb|EEK97834.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST26]
gi|228771265|gb|EEM19740.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228823304|gb|EEM69138.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|358355723|dbj|BAL20895.1| bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
NC7401]
gi|401082016|gb|EJP90287.1| peptide chain release factor 2 [Bacillus cereus IS075]
gi|401092690|gb|EJQ00815.1| peptide chain release factor 2 [Bacillus cereus AND1407]
gi|401198685|gb|EJR05600.1| peptide chain release factor 2 [Bacillus cereus MSX-A12]
Length = 326
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGSFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|383787632|ref|YP_005472201.1| peptide chain release factor 2 [Fervidobacterium pennivorans DSM
9078]
gi|383110479|gb|AFG36082.1| peptide chain release factor 2 [Fervidobacterium pennivorans DSM
9078]
Length = 369
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/370 (41%), Positives = 228/370 (61%), Gaps = 5/370 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y ++ +E + ++I + + +L ELE ++ FW+++ AQ+ + + +
Sbjct: 4 YEQKQRIEELKKKFDDIIEVFHPEDKKTKLKELEEESLKPDFWNDQKRAQQVNREIQRTR 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
I + K +D ++L+EE D + E +I+E+ K + +FEL +L+G
Sbjct: 64 KIIEDMERIKVLFEDIEVGIELSEE----DPSMQEHLEEMIEEVAKKIREFELEMILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
+D A +SI GAGGT++QDWA MLLRMY+RW E++ Y +V+ GEEAGIKSA I
Sbjct: 120 FDASNAYLSIHPGAGGTESQDWASMLLRMYMRWAERKGYDVEIVDYQEGEEAGIKSATIY 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G +AYGYL E+G HR+VR SPF+A R TSF+ V+P + ++ PE DL I
Sbjct: 180 IKGDFAYGYLKYERGVHRLVRISPFDANKRRHTSFASVNVLPEIEDDIDIEIKPE-DLRI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQL N+ A+ LKA+L + E
Sbjct: 239 DTYRASGAGGQYVNKTESAVRITHLPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELE 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+R +I+QI+G+ WG QIR+YVFHPY +VKD RT ET +I +VMDG+++ FI++
Sbjct: 299 KRRKQIEQIQGELKDISWGNQIRSYVFHPYTMVKDHRTDVETGNIEAVMDGDIDMFIEAE 358
Query: 365 LKYKYSMSLS 374
L Y + L+
Sbjct: 359 LVYYAKLGLN 368
>gi|309810763|ref|ZP_07704570.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
gi|308435300|gb|EFP59125.1| peptide chain release factor 2 [Dermacoccus sp. Ellin185]
Length = 370
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 245/374 (65%), Gaps = 9/374 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF N K++ V E+ L++L+K++ +LE ++A WD+ AQ+ AL+
Sbjct: 4 DFPNEIKNLRTTMASVREV---LDLEKLKKQIVDLEEQSAAPDLWDDPDAAQKITSALSR 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+ + + + +DD +V++ TEE DA L EA +K+L KA+ + E+ LL
Sbjct: 61 ANAENDRVENMDAAIDDLEVLVEMGTEE---NDADTLAEAERELKKLQKAVGELEVRTLL 117
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
+G +D+ AV++I AGAGG DA D+A+ML+RMY+RW E+ Y T+V++ S EEAG+KS
Sbjct: 118 NGEFDEREAVVTIRAGAGGVDAADFAEMLMRMYLRWAERHGYPTKVMDTSYAEEAGLKSV 177
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
EV YA+G LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + ++IPE +
Sbjct: 178 TFEVNVPYAFGNLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-ETTDTIEIPENE 236
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
L+I R+ G GGQ+VN ++AVR+THIPTG V E+SQ+ N+ AL ++++LL++
Sbjct: 237 LKIDVFRSSGPGGQSVNTTDSAVRMTHIPTGTVVSMQNEKSQIQNRAAALRVMQSRLLLL 296
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
+++ ++ K++ GD +KA WG Q+R+YV HPY++VKD+RT +E + V DG+++ FI
Sbjct: 297 KKQEEDAQKKELAGD-IKASWGDQMRSYVLHPYQMVKDLRTEYEVGNTSGVFDGDIDGFI 355
Query: 362 KSYLKYKYSMSLSA 375
++ +++K + + A
Sbjct: 356 EAGIRWKRAAARDA 369
>gi|303279527|ref|XP_003059056.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458892|gb|EEH56188.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 337
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 217/336 (64%), Gaps = 14/336 (4%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L LA+L+ +A++++ WD+ A+ ++ L DV++++ L F+ K+ DA T +++ +
Sbjct: 6 LRAMLADLDKRASEATLWDDPKNAKAVMEQLADVREQLELAAAFEDKLGDARTALEMIAD 65
Query: 90 MDSTDA--GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
S+D L E + I L AL+ +E +LL G YD GA + I AG GG DA +WA
Sbjct: 66 DPSSDVVPELASEISDAIASLEAALETWETRRLLVGTYDALGATVFINAGFGGFDAHEWA 125
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR-- 205
+ L YV W ++ + RV ++ GEE G++S +E++GR+AYGYL+ EKG HR+VR
Sbjct: 126 ERLESCYVAWARRRGFAVRVEARTPGEEVGLRSVTLEIDGRFAYGYLASEKGAHRMVRIG 185
Query: 206 ----QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE--ISFSRAGGKGGQNVNK 259
Q+P R ++F +V P L E++ + D I+ R+GG GGQNVNK
Sbjct: 186 GVAGQTPRG----RHSNFVAVDVAPTLEEKARSIHWSPYDRVRVITTMRSGGAGGQNVNK 241
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
VETAVR+ H+PTG+ VRC EERSQ N+ KA++RLKAKL +AEE+R +++ +RGD V+
Sbjct: 242 VETAVRMKHLPTGIVVRCEEERSQAMNRAKAIARLKAKLAAVAEERRLADVAAVRGDVVR 301
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDG 355
AE GQQIRNYV HPYKLVKDVRTG ETSD+ V+ G
Sbjct: 302 AERGQQIRNYVLHPYKLVKDVRTGVETSDVDGVLSG 337
>gi|308175261|ref|YP_003921966.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
gi|384161146|ref|YP_005543219.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
gi|384166040|ref|YP_005547419.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
gi|384170235|ref|YP_005551613.1| peptide chain release factor 2 [Bacillus amyloliquefaciens XH7]
gi|307608125|emb|CBI44496.1| peptide chain release factor 2 [Bacillus amyloliquefaciens DSM 7]
gi|328555234|gb|AEB25726.1| peptide chain release factor 2 [Bacillus amyloliquefaciens TA208]
gi|328913595|gb|AEB65191.1| peptide chain release factor 2 [Bacillus amyloliquefaciens LL3]
gi|341829514|gb|AEK90765.1| peptide chain release factor 2 [Bacillus amyloliquefaciens XH7]
Length = 327
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +KD +N ++ +L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKDYVNSYHQLSESHEELQMTYELLKE--EPDQELQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K L++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 EKELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GCKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP EE +D++I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNEE-IDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
>gi|406671406|ref|ZP_11078645.1| peptide chain release factor 2 [Facklamia hominis CCUG 36813]
gi|405580656|gb|EKB54715.1| peptide chain release factor 2 [Facklamia hominis CCUG 36813]
Length = 344
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 139/341 (40%), Positives = 218/341 (63%), Gaps = 3/341 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ Q+E ++A+ + + A FWD++++AQ +Q + D + N + +D V+L
Sbjct: 1 MDQMESDIAQCQDRMAQPGFWDDQSQAQSIIQEMNDKESTRNAFLKLVSDWEDLQVEVEL 60
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE + D L EE + + L ++L+ LLS +D A++ I GAGG ++QDW
Sbjct: 61 YEE--TLDRPLWEEIEKNCYKFEQNLKAYQLSLLLSEEHDHCNAILEIHPGAGGKESQDW 118
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RW + Y V++ GEEAGIKS +EV G AYG+L EKG HR++R
Sbjct: 119 GQMLLRMYERWASQHDYHISVIDYQNGEEAGIKSVTLEVSGDKAYGFLKSEKGVHRLIRI 178
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF +V P++ ++S+++ I ++DL I RA G GGQ++NK +AVRI
Sbjct: 179 SPFDSNGKRHTSFCSIDVTPMI-DDSIEIHINQDDLRIDTYRASGAGGQHINKTSSAVRI 237
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ + +RSQ+ N+ +A+ L+AKL + + +E+++I+G+ + WG QI
Sbjct: 238 THIPTGIVTQSQAQRSQIQNREQAMGLLRAKLYQLELADKEAELQKIKGEQKEIAWGSQI 297
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
R+YVFHPY++VKD RT E++++ +VMDGE++PFI +YL +
Sbjct: 298 RSYVFHPYRMVKDHRTNFESANVDAVMDGEIDPFIDAYLNW 338
>gi|342163427|ref|YP_004768066.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
IS7493]
gi|341933309|gb|AEL10206.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae
IS7493]
Length = 325
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVQEELVTQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|336391389|ref|ZP_08572788.1| peptide chain release factor 2 [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 332
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 212/325 (65%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD++A+AQ+ + A +K K + + + DD +L E D D + E
Sbjct: 2 AEPGFWDDQAQAQKLIDATNGLKAKYDSFQQLQQQYDDLTVSAELLAEED--DPQIAAEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ I +L + + Q+EL LL+GPYD A++ I GAGGT++QDW +MLLRMY+RW E+
Sbjct: 60 DTGITKLQQQMQQYELGLLLNGPYDSNNAILEIHPGAGGTESQDWGEMLLRMYMRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ V+ GEEAG+KS + ++G AYGYL E+G HR+VR SPF+A G R TSF+
Sbjct: 120 HFTVETVDYQAGEEAGVKSVTLLIKGHNAYGYLRSERGVHRLVRISPFDAAGRRHTSFTS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L +++++V+I +DL + RA G GGQ+VNK +AVRITH+PTG+ V ER
Sbjct: 180 VDVMPEL-DDTVNVEINSDDLRVDVYRASGAGGQHVNKTSSAVRITHLPTGIVVASQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ A++ L+AKL E++ E QI+G+ + WG QIR+YVF PY ++KD R
Sbjct: 239 SQLQNRQTAMNMLRAKLYQRELEEKEKERAQIQGEQAEIGWGSQIRSYVFQPYTMIKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T +ET + +V+DG+L+PFI +YL+
Sbjct: 299 TNYETGNGQAVLDGDLDPFIDAYLQ 323
>gi|423573165|ref|ZP_17549284.1| peptide chain release factor 2 [Bacillus cereus MSX-D12]
gi|401215563|gb|EJR22279.1| peptide chain release factor 2 [Bacillus cereus MSX-D12]
Length = 325
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKD---MVGSFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E ++++I EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 179 CEVVPEFNDE-VEIEIRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 237
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 238 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 297
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 298 TNTEVGNVQAVMDGEIDPFIDAYLR 322
>gi|399023710|ref|ZP_10725764.1| peptide chain release factor 2 [Chryseobacterium sp. CF314]
gi|398082239|gb|EJL72997.1| peptide chain release factor 2 [Chryseobacterium sp. CF314]
Length = 370
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 219/355 (61%), Gaps = 5/355 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++ R+E++ +++ + E+ + K A FWD EA+ L+ L K +
Sbjct: 7 IKQVQSRIEDLHKYLQIEKKKIEITNDDEKTAAPGFWDTPKEAEAFLKQLRSKKKWVEDY 66
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
D T+ +D +++ +E D L+EA +L + ++ E +LS D+ A
Sbjct: 67 EDINTQFEDLQVLMEFAKE-DPDSEKELDEA---FPKLVEKIEDLEFKNMLSNEGDELSA 122
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
V+ ITAGAGGT++ DWA ML+RMY W EKQ YK R + GE AG+K+ +E++G YA
Sbjct: 123 VLQITAGAGGTESCDWASMLMRMYTMWAEKQGYKIRELNFQEGEVAGVKTVTLEIDGEYA 182
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
+GYL GE G HR+VR SPF++ R TSF V PL+ ++++++ I D+ R+
Sbjct: 183 FGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRSS 241
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQNVNKVETAVR+ H PTG+ + +E RSQL NK KA+ L+++L + E+R
Sbjct: 242 GAGGQNVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMRAR 301
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+I + +K EWG QIRNYV HPYKLVKDVR+GHETSD+ SVM+G L PF+K++L
Sbjct: 302 NEIEANKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDSVMNGNLTPFLKAFL 356
>gi|358065605|ref|ZP_09152141.1| peptide chain release factor 2 [Clostridium hathewayi WAL-18680]
gi|356696091|gb|EHI57714.1| peptide chain release factor 2 [Clostridium hathewayi WAL-18680]
Length = 332
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 209/330 (63%), Gaps = 6/330 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ + ++ ++KD + +T+ ++ ++++ E D ++ E ++
Sbjct: 6 FWDDPERSTRIMKEAKNLKDTVESYRRLETQFEEIGLLIEMGYE--ENDPEVIPEIQEMM 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
E + L+ ++ LLSG YD A++ + AGAGGT++ DW ML RMY R+ +K + T
Sbjct: 64 TEFEEKLENLRISTLLSGEYDSSNAILKLNAGAGGTESCDWCSMLYRMYCRFADKMGFTT 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS I+V G AYGYL E G HR+VR SPFNA G RQTSF +VM
Sbjct: 124 EVLDYLDGDEAGIKSVTIQVNGVNAYGYLKSEHGVHRLVRISPFNAAGKRQTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +DV I ++DL I R+ G GGQ++NK +A+RITHIPTGV V+C ERSQ
Sbjct: 184 PDI-EEDLDVDINQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKL ++ +++ A+ + IRGD + WG QIR+YV PY +VKD RT E
Sbjct: 243 NKDKAMQMLKAKLFLLKQQENAANLSDIRGDVAEIGWGNQIRSYVLQPYTMVKDHRTNEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+ ++ +V+DG L+ FI +YLK+ MSL+
Sbjct: 303 SGNVSAVLDGNLDAFISAYLKW---MSLNG 329
>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
gi|424761121|ref|ZP_18188703.1| peptide chain release factor 2 [Enterococcus faecalis R508]
gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
gi|402402590|gb|EJV35298.1| peptide chain release factor 2 [Enterococcus faecalis R508]
Length = 327
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|406949410|gb|EKD79906.1| peptide chain release factor 2, programmed frameshift [uncultured
bacterium]
Length = 347
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 166/366 (45%), Positives = 235/366 (64%), Gaps = 22/366 (6%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D N D++ R+EEI QLEK EM++ D FW +A+AQ+ Q L
Sbjct: 1 MSDLVNRLGDLKTKL-RLEEI-------QLEKISLLKEMESGD--FW-GQADAQKKSQRL 49
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+++ D ++ + ++ + DA T ++L +E+D G+ E AL + EL
Sbjct: 50 SEINDLLDTHQEVESAISDAETALELGDEIDKY-VGIAE----------SALSKLELATY 98
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG +D A++SI AGAGGT+A DW+ ML RMY+R+ E+ + +++++ G+E GIKS
Sbjct: 99 LSGRFDALDALLSIHAGAGGTEAMDWSGMLERMYLRYAERCGWGYEIIDETRGDETGIKS 158
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+I +G+ AYG L E GTHR+VRQSPFNA LRQTSF+ EV+P + E++ DV + +E
Sbjct: 159 VLIRFKGKNAYGLLKREAGTHRLVRQSPFNADKLRQTSFALVEVLPAVEEDTPDVVVRDE 218
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+E F RAGG GGQNVNKV TAVR+ H P+G+ + ++ER Q +N+ + LKAKL
Sbjct: 219 DVEWQFFRAGGHGGQNVNKVSTAVRLIHKPSGIVIVSSQERYQQSNRDICMRLLKAKLWE 278
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
IAE +R +EI +G+ A +G QIRNYV HPYKLVKDVRTG+ETS SV+DG+L F
Sbjct: 279 IAEGKRKAEITGAKGEYKVASFGNQIRNYVLHPYKLVKDVRTGYETSQAESVLDGDLNAF 338
Query: 361 IKSYLK 366
I++ LK
Sbjct: 339 IQAQLK 344
>gi|385840722|ref|YP_005864046.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
Length = 355
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 216/342 (63%), Gaps = 2/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLEVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++QDW
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RW + +K V+ G++AGIKS + +EG+ AYGYL E+G HR+VR
Sbjct: 128 GSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+
Sbjct: 188 SPFDSAGRRHTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRL 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
HIPTG+ V +RSQ N+ A + L+AKL + E++ + I+G+ + WG QI
Sbjct: 247 IHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 307 RSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
Length = 327
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|183603302|ref|ZP_02711260.2| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1087-00]
gi|183603790|ref|ZP_02721350.2| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
gi|194397508|ref|YP_002037401.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
gi|225856431|ref|YP_002737942.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
gi|225858565|ref|YP_002740075.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
gi|225860729|ref|YP_002742238.1| peptide chain release factor 2 [Streptococcus pneumoniae
Taiwan19F-14]
gi|298229611|ref|ZP_06963292.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|298255815|ref|ZP_06979401.1| peptide chain release factor 2 [Streptococcus pneumoniae str.
Canada MDR_19A]
gi|307067358|ref|YP_003876324.1| protein chain release factor B [Streptococcus pneumoniae AP200]
gi|387787917|ref|YP_006252985.1| peptide chain release factor RF-2 [Streptococcus pneumoniae ST556]
gi|415697646|ref|ZP_11456876.1| peptide chain release factor 2 [Streptococcus pneumoniae 459-5]
gi|415749161|ref|ZP_11477105.1| peptide chain release factor 2 [Streptococcus pneumoniae SV35]
gi|415751843|ref|ZP_11478954.1| peptide chain release factor 2 [Streptococcus pneumoniae SV36]
gi|183570249|gb|EDT90777.1| peptide chain release factor 2 [Streptococcus pneumoniae
CDC1087-00]
gi|183578420|gb|EDT98948.1| peptide chain release factor 2 [Streptococcus pneumoniae MLV-016]
gi|194357175|gb|ACF55623.1| peptide chain release factor 2 [Streptococcus pneumoniae G54]
gi|225721230|gb|ACO17084.1| peptide chain release factor 2 [Streptococcus pneumoniae 70585]
gi|225726237|gb|ACO22089.1| peptide chain release factor 2 [Streptococcus pneumoniae P1031]
gi|225727373|gb|ACO23224.1| peptide chain release factor 2 [Streptococcus pneumoniae
Taiwan19F-14]
gi|306408895|gb|ADM84322.1| Protein chain release factor B [Streptococcus pneumoniae AP200]
gi|379137659|gb|AFC94450.1| peptide chain release factor RF-2 [Streptococcus pneumoniae ST556]
gi|381309539|gb|EIC50372.1| peptide chain release factor 2 [Streptococcus pneumoniae SV36]
gi|381317455|gb|EIC58180.1| peptide chain release factor 2 [Streptococcus pneumoniae SV35]
gi|381319244|gb|EIC59960.1| peptide chain release factor 2 [Streptococcus pneumoniae 459-5]
Length = 329
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|147669189|ref|YP_001214007.1| peptide chain release factor 2 [Dehalococcoides sp. BAV1]
gi|146270137|gb|ABQ17129.1| bacterial peptide chain release factor 2 (bRF-2) [Dehalococcoides
sp. BAV1]
Length = 356
Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 214/336 (63%), Gaps = 5/336 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +++ FW ++ AQ+ ++ L K L + +++D + L+ E
Sbjct: 20 ELEITELETASSNPDFWQDQQNAQKAMKKLAANKRTSELWRGLERRINDLTELAVLSRE- 78
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L E I L LD E+ SG YD A++++ AGAGG ++QDWA ML
Sbjct: 79 ---DPSLSNEIEHEISGLTAELDSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDWAGML 135
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRM++RW EK+ + ++++S GEEAGIKSA +++EG YAYG+L E G HR++R SPF+
Sbjct: 136 LRMFMRWAEKKGFGMEILDQSPGEEAGIKSATLQIEGEYAYGFLKSEHGVHRLIRLSPFD 195
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSF+ E+MP E+S+D+ I ED++I R+ G GGQNV KV TAVR+THIP
Sbjct: 196 ADHARHTSFALVEIMPE-AEDSVDIDIKPEDIKIDMFRSSGPGGQNVQKVSTAVRVTHIP 254
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
+G+ V ERSQ N+ A+ L +KLL + +RA E +++G+ + AEWG QIR+YV
Sbjct: 255 SGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGSQIRSYV 314
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
HPYK+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 315 LHPYKMVKDHRTDYEVGNAEAVLEGELDGFISAYLR 350
>gi|417936704|ref|ZP_12580011.1| peptide chain release factor 2 [Streptococcus infantis X]
gi|417937756|ref|ZP_12581056.1| peptide chain release factor 2 [Streptococcus infantis SK970]
gi|419844279|ref|ZP_14367575.1| peptide chain release factor 2 [Streptococcus infantis ATCC 700779]
gi|343392020|gb|EGV04593.1| peptide chain release factor 2 [Streptococcus infantis SK970]
gi|343400220|gb|EGV12740.1| peptide chain release factor 2 [Streptococcus infantis X]
gi|385701994|gb|EIG39148.1| peptide chain release factor 2 [Streptococcus infantis ATCC 700779]
Length = 329
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N KMD+ V++ + + D
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E + EL++ + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VKDELVEKLSELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 177 TSFTSVEVMPEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTNFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|403739010|ref|ZP_10951611.1| peptide chain release factor 2 [Austwickia chelonae NBRC 105200]
gi|403191660|dbj|GAB78381.1| peptide chain release factor 2 [Austwickia chelonae NBRC 105200]
Length = 383
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 235/359 (65%), Gaps = 5/359 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
+R + L+ + +LE A+ WD++ AQ L+ ++ + ++++D
Sbjct: 29 VRQVTDVDTLKARITDLEKAASAPDLWDDQENAQAVTSRLSRANAELERIEGMDSRIEDL 88
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V++ E D DA L EA + L KA+ + E+ LL+G YD+ AV++I +GAGG
Sbjct: 89 EVLVEMATE-DGGDAETLAEAEDELASLRKAVGELEVRTLLNGEYDEREAVVTIRSGAGG 147
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YAYG L+ E GT
Sbjct: 148 VDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKVPYAYGNLAVEAGT 207
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNK 259
HR+VR SPF+ +G RQTSF+ EV+PL+ ES D + IPE +L+I R+ G GGQ+VN
Sbjct: 208 HRLVRISPFDNQGRRQTSFAAVEVIPLI--ESTDTIDIPESELKIDVFRSSGPGGQSVNT 265
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ +++ ++ K++ GD VK
Sbjct: 266 TDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLKKQEEDAKKKELAGD-VK 324
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
A WG Q+R+YV HPY++VKD+RT HE + V DG+++ F+++ +++K S+ A+++
Sbjct: 325 ASWGDQMRSYVLHPYQMVKDLRTEHEVGNTSGVFDGDIDAFLEAGIRWKRSLEREAANS 383
>gi|347542944|ref|YP_004857581.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985980|dbj|BAK81655.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 327
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 216/331 (65%), Gaps = 11/331 (3%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKIN----LLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
DS FWD+ + + ++ +KDKI+ L D++ + +++ I+K D +D +
Sbjct: 4 DSKFWDDIENSTKIVKLAKSLKDKIDEVDKLYKDYEY-LVESLEIIK-----DESDEEYI 57
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
+ + +D + LL+G YDK ++I AGAGG DAQDW+DML RMY+RWG
Sbjct: 58 QMFKDDFYKFKNVIDTLNIKTLLNGEYDKNNVFLTIHAGAGGVDAQDWSDMLFRMYMRWG 117
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
E+ ++ V++ S+G+EAGIKSA I++EG YAYGYL GEKG HR+VR SPFNA G RQTS
Sbjct: 118 EENKFALSVIDYSIGDEAGIKSATIKIEGEYAYGYLKGEKGIHRLVRISPFNANGKRQTS 177
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ E++P + + +++I E +L+I RA G GGQ+VNK E+AVRITH+ TG+ V+C
Sbjct: 178 FASVEILPEI-QNLEEIKINESELKIDTYRASGAGGQHVNKTESAVRITHLKTGIVVQCQ 236
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQL+NK A+ + +KL+ + + ++ + GD + +G QIR+YV HPY LVK
Sbjct: 237 NERSQLSNKETAMKIMISKLIELKDRSHKEKLDDLSGDLKEIGFGSQIRSYVMHPYTLVK 296
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYKY 369
D R ETSDI V++G+++ FIK+Y++ Y
Sbjct: 297 DHRMNIETSDINKVLNGDIDMFIKNYIRGVY 327
>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
Length = 369
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/366 (43%), Positives = 237/366 (64%), Gaps = 11/366 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S + I A L +L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMGSIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L +EMD DA L EA + + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKTETLRGRIDDLAVLFELAQEMD--DADTLAEAEAELVSVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
+ A+++I A AGG DA D+A+ L RMY+RW E+ Y T + E S EEAGIKS V
Sbjct: 123 AEREALVNIRAEAGGVDASDFAERLQRMYLRWAERHGYPTEIYETSYAEEAGIKSTTFVV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E S V+I E +L +
Sbjct: 183 KAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-ETSDHVEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ VN ++AVRITHIPTG+ V C ERSQ+ NK A++ L+AKLL E+
Sbjct: 242 VYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQAKLL----ER 297
Query: 306 RASEIKQIRGDAVK---AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
R E +Q R DA+K + WG Q+R+YV HPY++VKD+RT E + +V+DGE++ F++
Sbjct: 298 RRQE-EQARMDALKDGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLE 356
Query: 363 SYLKYK 368
+ ++++
Sbjct: 357 AGIRWR 362
>gi|430748512|ref|YP_007211420.1| peptide chain release factor 2 [Thermobacillus composti KWC4]
gi|430732477|gb|AGA56422.1| peptide chain release factor 2 [Thermobacillus composti KWC4]
Length = 369
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 226/361 (62%), Gaps = 3/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++++D+ + R++ +R S L ++ +A+ E K FWD+ AQ+ + L VK
Sbjct: 5 SVKQDLREMAKRLQALRGSLDLDLKQEIIADYEEKMTAPDFWDDNDRAQKLIAELNAVKS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ T + D A L + D L E A + +L + + FEL LL+ PY
Sbjct: 65 VVE--TYNRLTGDHADLETLLELAEEEGDESLEAELAEGVAKLVRDIGDFELQLLLNQPY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A++ + GAGGT++QDWA ML RMY RW EK+ +K V++ G+EAGIKS I +
Sbjct: 123 DRLNAILELHPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLPGDEAGIKSVSILI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G AYGYL EKG HR+VR SPF+A G R TSF +V+P + ++ ++++I EDL+I
Sbjct: 183 RGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCDVVPEI-DDDVEIEIRPEDLKID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ+VNK E+AVRITHIPTG+ V C ERSQ+ N+ +A+ L++KL + E+
Sbjct: 242 TYRSSGAGGQHVNKTESAVRITHIPTGIIVACQSERSQIQNRERAMKMLRSKLYELKIEE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ E+ IRG+ WG QIR+YVFHPY +VKD RT +ET ++ +VMDGE++ FI +YL
Sbjct: 302 QRKELAAIRGEQTDIAWGNQIRSYVFHPYSMVKDHRTQYETGNVQAVMDGEIDGFIDAYL 361
Query: 366 K 366
+
Sbjct: 362 R 362
>gi|380031731|ref|YP_004888722.1| peptide chain release factor 2, C-terminal fragment (natural
frameshift) [Lactobacillus plantarum WCFS1]
gi|342240974|emb|CCC78208.1| peptide chain release factor 2, C-terminal fragment (natural
frameshift) [Lactobacillus plantarum WCFS1]
Length = 357
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 214/343 (62%), Gaps = 5/343 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD-AVTIVK 85
L L + + E E + A+ FWD++A AQ+ + +K K + ++ D AV
Sbjct: 12 LDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTFKQLADEVGDLAVAYEL 71
Query: 86 LTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
L+EE DA + E + + L Q+ L LL GPYD+ A++ I GAGGT++QD
Sbjct: 72 LSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNNAILEIHPGAGGTESQD 128
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
W MLLRMY RW +K V+ G+EAGIKS + + G AYGYL EKG HR+VR
Sbjct: 129 WGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHNAYGYLRSEKGVHRLVR 188
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+A G R TSF+ +VMP L ++++DV I EDL+I RA G GGQ+VNK +AVR
Sbjct: 189 ISPFDAAGRRHTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRASGAGGQHVNKTSSAVR 247
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
ITH+PTG+ V +RSQL N+ AL+ L+AKL EE++A E I+G+ + WG Q
Sbjct: 248 ITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKERAAIQGEQMDIGWGSQ 307
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
IR+YVFHPY +VKD RT +E+ +VMDG+L+PF+ +YL++K
Sbjct: 308 IRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 350
>gi|408501432|ref|YP_006865351.1| peptide chain release factor 2 [Bifidobacterium asteroides PRL2011]
gi|408466256|gb|AFU71785.1| peptide chain release factor 2 [Bifidobacterium asteroides PRL2011]
Length = 377
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 152/365 (41%), Positives = 232/365 (63%), Gaps = 4/365 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E A + E I + + L +A+LE +A+ WD++ AQ+ L+ ++ ++ L
Sbjct: 10 LEQAKAKYEMISKALDPEGLRSRIADLERQASAPGLWDDQENAQKVTSRLSALQSQLKHL 69
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+++DD + +L E D L EA I L L E+ LL G YD+ A
Sbjct: 70 ESASSRLDDVQALEELGREEHDQDT--LVEARKEIDSLRSDLADMEIQTLLDGEYDERAA 127
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
V++I +GAGG DA DWA MLLRMY+RW E+ + T+V++ S EEAGIKSA +V+ YA
Sbjct: 128 VVTIRSGAGGVDAADWAQMLLRMYMRWAERHGFSTKVMDTSYAEEAGIKSATFQVDAPYA 187
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E + + IP+ D+ + +
Sbjct: 188 YGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVIPLV-EPTDHIDIPDSDIRVDTYCSS 246
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ VN +AVRITH+PT + V +ERSQ+ N+ A++ L+++LLV+ E+ A +
Sbjct: 247 GPGGQGVNTTYSAVRITHLPTNIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHEEEAKKK 306
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
K++ GD +KA WG Q+R+YV HPY++VKD+RTG+ETSD V DG+++ FI++ +++++
Sbjct: 307 KELAGD-IKASWGDQMRSYVLHPYQMVKDLRTGYETSDTQGVFDGDIDAFIEAGIRWRHQ 365
Query: 371 MSLSA 375
+ A
Sbjct: 366 QRVQA 370
>gi|418102471|ref|ZP_12739547.1| peptide chain release factor 2 [Streptococcus pneumoniae NP070]
gi|419475148|ref|ZP_14014989.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14688]
gi|419486258|ref|ZP_14026025.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44128]
gi|353776637|gb|EHD57112.1| peptide chain release factor 2 [Streptococcus pneumoniae NP070]
gi|379561486|gb|EHZ26503.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14688]
gi|379589167|gb|EHZ54007.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44128]
Length = 325
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 214/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ A
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEELVEQLA--- 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 -ELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|408531516|emb|CCK29690.1| Peptide chain release factor 2 [Streptomyces davawensis JCM 4913]
Length = 352
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 228/351 (64%), Gaps = 4/351 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A L +L ++A LE +AA S WD+ EAQ+ L+ ++ ++ + ++
Sbjct: 1 MESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPDEAQKITSKLSHLQAEVRKTEALRGRI 60
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD + ++ EE D D EA S + + KALD+ E+ LLSG YD A+++I A
Sbjct: 61 DDLAVLFEMAEEEDDPDT--RAEAESELASVKKALDEMEVRTLLSGEYDSREALVNIRAE 118
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+ L RMY+RW E+ YKT ++E S EEAGIKS V+ YAYG LS E
Sbjct: 119 AGGVDAADFAEQLQRMYLRWAERHGYKTELIETSYAEEAGIKSTTFSVQVPYAYGTLSVE 178
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ + I E +L + R+ G GGQ V
Sbjct: 179 QGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIDIDESELRVDVYRSSGPGGQGV 237
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++ +++ ++GD
Sbjct: 238 NTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGDG 297
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT E + SV+DGE++ F+++ ++++
Sbjct: 298 GNS-WGNQMRSYVLHPYQMVKDLRTEFEVGNPQSVLDGEIDGFLEAGIRWR 347
>gi|385800795|ref|YP_005837199.1| peptide chain release factor 2 (bRF-2) [Halanaerobium praevalens
DSM 2228]
gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
praevalens DSM 2228]
Length = 365
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 160/363 (44%), Positives = 229/363 (63%), Gaps = 15/363 (4%)
Query: 15 SDRVEEIRASAGLQQLEKEL---------AELEMKAADSSFWDNRAEAQETLQALTDVKD 65
SD++ E++AS Q L L +E + A FWD++ A++ Q L +K
Sbjct: 6 SDKLAELKAS--FQDLSDLLDREKLFETKNSIEAEMAAGGFWDDKENARQKSQQLDRIKK 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+I ++ + K ++A ++L E DA L +E + + EL K +++ EL L+ PY
Sbjct: 64 RIKVIQSLEEKFEEAEIYLELAAE---EDANLNKELQNTLAELEKEIEKLELKLRLNEPY 120
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++SI GAGGT++QDWA MLLRMY RW E Y+ ++ + GEEAGIKS + +
Sbjct: 121 DDHNAILSIHPGAGGTESQDWAQMLLRMYSRWAEANDYQLETLDFNPGEEAGIKSVTLMI 180
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G YAYGYL GE+G HR+VR SPF+A G R TSF+ +VMP + + ++V+I E +L+I
Sbjct: 181 SGDYAYGYLKGERGVHRLVRISPFDASGRRHTSFASVDVMPEI-DSDLEVEIDENNLKID 239
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ+VNK ++AVRITH PTGV V+C +RSQ NK A+ L +KLL + E
Sbjct: 240 TYRASGAGGQHVNKTDSAVRITHQPTGVVVQCQNQRSQHKNKETAMKILSSKLLELKREA 299
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+A +I ++ G+ + WG QIR+YVFHPY ++KD RT E ++ VMDG L+ FI+SYL
Sbjct: 300 QAEKIDELGGEHKEIAWGSQIRSYVFHPYSMIKDHRTDFEEGNVDKVMDGYLDEFIESYL 359
Query: 366 KYK 368
KYK
Sbjct: 360 KYK 362
>gi|417971945|ref|ZP_12612861.1| peptide chain release factor 2 [Corynebacterium glutamicum S9114]
gi|344043699|gb|EGV39387.1| peptide chain release factor 2 [Corynebacterium glutamicum S9114]
Length = 368
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 223/348 (64%), Gaps = 6/348 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
Q++ + ELE +AAD S WD+ AQ+ L+ V+ ++ +TD + +++D +V+L
Sbjct: 26 QEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE D D + EE + +L +D E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 86 EEEDG-DTSIAEEE---LADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY RW EK +K + + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 142 EMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ D+ + R+ G GGQ+VN ++AVR+T
Sbjct: 202 PFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 261 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL-GAGGNASWGNQMR 319
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+YV HPY++VKD+RT E +D V+DG++ +++ ++++ + S SA
Sbjct: 320 SYVLHPYQMVKDLRTNFEVNDPQKVLDGDINGLLEAGIRWRMAESQSA 367
>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
11741]
gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
11741]
Length = 355
Score = 293 bits (751), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 216/342 (63%), Gaps = 2/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQE + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQEVIAENNDLKAKFETFHELAESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++QDW
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RW + +K V+ G++AGIKS + +EG+ AYGYL E+G HR+VR
Sbjct: 128 GSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+
Sbjct: 188 SPFDSAGRRHTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRL 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
HIPTG+ V +RSQ N+ A + L+AKL + E++ + I+G+ + WG QI
Sbjct: 247 IHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEVEEKEKQRAAIQGEQLDIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 307 RSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
>gi|392390216|ref|YP_006426819.1| peptide chain release factor 2 (bRF-2) [Ornithobacterium
rhinotracheale DSM 15997]
gi|390521294|gb|AFL97025.1| bacterial peptide chain release factor 2 (bRF-2) [Ornithobacterium
rhinotracheale DSM 15997]
Length = 371
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 219/352 (62%), Gaps = 6/352 (1%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
RV+ + +++ + E+ E KAA FWD+ AQ L+ L K+ +N +
Sbjct: 13 RVQNLHTYLEIEKKKIEILNDEEKAASPEFWDDPKSAQNHLKQLQSKKNWVNDYQAIEQA 72
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEA-ASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+D + + +E+ G EE A K L K L++ E +LS D AV+ IT
Sbjct: 73 TNDLKVLYEFYKELGE---GSEEEIDAQYAKALEK-LEKIEFKNMLSEEGDDMSAVLQIT 128
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGGT++ DWA ML+RMY+ W EK YK + + G+ AG+K+ +E+EG YA+GYL
Sbjct: 129 AGAGGTESCDWASMLMRMYLMWAEKNGYKVKELNYQDGDVAGVKTVTLEIEGEYAFGYLK 188
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
GE G HR+VR SPF++ R TSF V PL+ ++++++ I D+E+ SR+GG GGQ
Sbjct: 189 GENGVHRLVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEIDINPNDVEMQTSRSGGAGGQ 247
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NVNKVET V++TH PTG+ V C ERSQLAN+ +A+ LK++L I E+R +I
Sbjct: 248 NVNKVETKVQLTHKPTGIVVVCQVERSQLANRERAMQMLKSELYKIELEKRMEARNEIEA 307
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+ EWG QIRNYV HPYKLVKDVRTG ETSD+ SVM+G ++ F+KSYL +
Sbjct: 308 NKKSIEWGSQIRNYVMHPYKLVKDVRTGEETSDVDSVMNGNIDDFLKSYLMF 359
>gi|51891274|ref|YP_073965.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
14863]
gi|51854963|dbj|BAD39121.1| peptide chain release factor 2 [Symbiobacterium thermophilum IAM
14863]
Length = 308
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/305 (48%), Positives = 209/305 (68%), Gaps = 2/305 (0%)
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
L F+ ++DD ++ L EE ++DA + EA + L + + QFEL LL+G YD
Sbjct: 4 LESFRRRLDDLEVMIDLAEE--ASDAEMAAEARAEADALEEQVRQFELQVLLNGKYDAYN 61
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
A+++I AGAGGT+AQDWA+MLLRMYVRW E++ +K +++ G+EAGIKS I V G Y
Sbjct: 62 AILTIHAGAGGTEAQDWAEMLLRMYVRWAERRGFKVEELDRLDGDEAGIKSVTIAVRGPY 121
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG+L E G HR+VR SPF+A G R TSF+ EVMP + ++ D++I EDL I R+
Sbjct: 122 AYGFLRPEMGVHRLVRISPFDASGRRHTSFAAVEVMPEIEDDVDDIEIRPEDLRIDTFRS 181
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VNK E+AVRITH+PTG+ V C +ERSQ+ N+ A+ L++KL+ + E++ E
Sbjct: 182 SGAGGQHVNKTESAVRITHLPTGIVVSCQQERSQMQNRAVAMMMLRSKLVELKIEEQNKE 241
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 369
+ QIRG ++ WG QIR+YVF PY LVKD R+G E + +V+DGEL+PFI YL+ +
Sbjct: 242 MAQIRGPQMEIAWGSQIRSYVFQPYTLVKDHRSGVEVGNAQAVIDGELDPFIYGYLEKRA 301
Query: 370 SMSLS 374
+ L+
Sbjct: 302 NGELA 306
>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
Length = 327
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|297626158|ref|YP_003687921.1| peptide chain release factor 2 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921923|emb|CBL56483.1| Peptide chain release factor 2 (RF-2) [Propionibacterium
freudenreichii subsp. shermanii CIRM-BIA1]
Length = 369
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 219/337 (64%), Gaps = 5/337 (1%)
Query: 32 KELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMD 91
K++ ELE +A+ W+++ AQ L+ ++ + + ++++DDA T+++L E
Sbjct: 31 KQIEELETEASAPDLWNDQEHAQSVTSRLSRLQSSVEKVQTLRSRLDDASTLLELASE-- 88
Query: 92 STDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLL 151
+DA +EA I L +D E+ LLSG YD+ A+++I + AGG DA D+A MLL
Sbjct: 89 ESDADTAQEAEKEIATLADEIDTLEVQTLLSGEYDERDALVTIRSEAGGVDAADFAAMLL 148
Query: 152 RMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNA 211
RMY RW E+ Y V + S EEAGIKSA V+ YAYG LS E+GTHR+VR SPF+
Sbjct: 149 RMYERWAERHAYSYEVYDISYAEEAGIKSATFTVKSPYAYGTLSVEQGTHRLVRISPFDN 208
Query: 212 KGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 271
+G RQTSF+G EV+P++ EE+ ++ IPE+D+ + A G GGQ VN ++AVRITH+PT
Sbjct: 209 QGRRQTSFAGVEVLPVV-EETDNIDIPEKDIRVDVFHASGPGGQGVNTTDSAVRITHLPT 267
Query: 272 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVF 331
G+ V C ERSQ+ NK L L+AKLL A ++R +E+ ++ D WG Q+R+YV
Sbjct: 268 GIVVTCQNERSQIQNKAAGLRVLQAKLLERARQEREAEMDALKSDG--NSWGSQMRSYVL 325
Query: 332 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
HPY++VKD+RTG E+ +V DG+++ FI+ ++++
Sbjct: 326 HPYQMVKDLRTGFESGSPDNVFDGDIDGFIERGIRWR 362
>gi|307708908|ref|ZP_07645368.1| peptide chain release factor 2 [Streptococcus mitis SK564]
gi|307620244|gb|EFN99360.1| peptide chain release factor 2 [Streptococcus mitis SK564]
Length = 325
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVQEELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|326798108|ref|YP_004315927.1| hypothetical protein [Sphingobacterium sp. 21]
gi|326548872|gb|ADZ77257.1| hypothetical protein Sph21_0678 [Sphingobacterium sp. 21]
Length = 361
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 223/358 (62%), Gaps = 5/358 (1%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
+++++ DR +R + +KE+ + + FWD+ EA++ LQ++ K
Sbjct: 3 KENIQELRDRAASLRRHLDIDAKQKEINQEQEITLKPDFWDHPKEAEKVLQSIKSKKVWT 62
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + +DDA + + D+++ +EA + +E K +++ E +LS D+
Sbjct: 63 DSFDELLQAIDDASVMFDFYQSGDASE----QEADELFQEALKRVEELEFKNMLSAEEDQ 118
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++ ITAGAGGT++ DWA ML+RMY+ WGEK YK + G+ AG+KS ++ +G
Sbjct: 119 LTAILQITAGAGGTESCDWAAMLMRMYIMWGEKNGYKVTEQDFLEGDVAGVKSVTLQFDG 178
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
+AYGYL GE G HR+VR SPF++ R TSF+ V PL+ ++++++++ + D+E
Sbjct: 179 NFAYGYLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLV-DDTIEIEVKDSDIEWDTF 237
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQNVNKVETAVR+ H P+G+ ++ E RSQL NK A+ LK++L I +R
Sbjct: 238 RSGGAGGQNVNKVETAVRLHHKPSGIVIKNQESRSQLQNKDNAMRLLKSQLYEIEMRKRM 297
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
I G K EWG QIRNYV HPYKLVKD+RTGHETS+ +V+DGEL+ F+KSYL
Sbjct: 298 ETTAAIEGSKKKIEWGSQIRNYVLHPYKLVKDLRTGHETSNTQAVLDGELDEFLKSYL 355
>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
12680]
gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
12680]
Length = 371
Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 231/357 (64%), Gaps = 3/357 (0%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R+EEI S ++ L+ + +LE K FWD+ EAQ+ ++ ++ +K++++ +
Sbjct: 16 RLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSYESLVRE 75
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
++D +++L E + + EAA+ + LN+ ++EL+ + G +D A++S+ A
Sbjct: 76 IEDISALLELAEAEEDEEL--YREAAAELARLNRRFREYELSIMFKGEHDDSNAIVSLHA 133
Query: 137 GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSG 196
GAGGTDAQDW +MLLRMY RW E Y+ +++ GEEAGIKS + ++G+YAYG +
Sbjct: 134 GAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYGKMRA 193
Query: 197 EKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQN 256
E G HR++R SPF+A G R TSF+ V+P + ++ ++V I +DL I RAGG GGQ+
Sbjct: 194 EAGVHRLIRVSPFDASGRRHTSFALVSVLPEI-QDDVEVTISSDDLRIDTFRAGGAGGQH 252
Query: 257 VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 316
VNK ++AVRITH+P+G+ V+C ERSQ ANK+ A+ L+AKL + + ++ +++++G+
Sbjct: 253 VNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQKLKGE 312
Query: 317 AVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
+ WG QIR YV +P+ LVKD RTG E ++ +V+DG++ FI +YL KY +
Sbjct: 313 YKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYLGQKYGAGI 369
>gi|410866577|ref|YP_006981188.1| Peptide chain release factor 2 [Propionibacterium acidipropionici
ATCC 4875]
gi|410823218|gb|AFV89833.1| Peptide chain release factor 2 [Propionibacterium acidipropionici
ATCC 4875]
Length = 368
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 228/363 (62%), Gaps = 5/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+L++ V+ + EI + +E+AELE + A WD++ AQ+ L+ ++
Sbjct: 5 DLQQTVDELDHSLSEIETVLDPEAKHREIAELEKEVAAPDLWDDQEHAQQVTSRLSALQS 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ L +++++D +++ E DA EA I L +D E+ LLSG Y
Sbjct: 65 QVEKLEQLRSRIEDVGVLLEFAGE--GGDADSAAEAEGEISSLRTEIDALEVRTLLSGKY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D+ A+++I + AGG DA D+A+MLLRMY+RW E+ +YK V++ S EEAGIKSA V
Sbjct: 123 DEREALVTIRSEAGGVDAADFAEMLLRMYLRWAERHQYKVEVLDTSYAEEAGIKSATFIV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+AYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ EE+ V IPE DL +
Sbjct: 183 HAPFAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EETDHVDIPEADLRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
A G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK AL L+AKLL A +
Sbjct: 242 VFHASGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKAAALRVLQAKLLEKARAE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ +E+ ++ + WG Q+R+YV HPY++VKD+RT HE + +V DG+++ FI + +
Sbjct: 302 QEAEMNSLKSEG--NSWGAQMRSYVLHPYQMVKDLRTNHEVGNTDAVFDGDIDAFIDAGI 359
Query: 366 KYK 368
+++
Sbjct: 360 RWR 362
>gi|307705242|ref|ZP_07642109.1| peptide chain release factor 2 [Streptococcus mitis SK597]
gi|307621191|gb|EFO00261.1| peptide chain release factor 2 [Streptococcus mitis SK597]
Length = 325
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 214/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFQKMEELQDEVEILLDFLAEDESVHEELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|386840528|ref|YP_006245586.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100829|gb|AEY89713.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793821|gb|AGF63870.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 368
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 235/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L ++ ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKMRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE + D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLAVLFEMAEEENDPDTRA--EAESELTAVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT ++E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTELIETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E+S V+I E +L I
Sbjct: 183 HSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDESELRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVRITH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEFEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|307706955|ref|ZP_07643754.1| peptide chain release factor 2 [Streptococcus mitis SK321]
gi|307617669|gb|EFN96837.1| peptide chain release factor 2 [Streptococcus mitis SK321]
Length = 325
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 214/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVHEELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|452973508|gb|EME73330.1| peptide chain release factor 2 [Bacillus sonorensis L12]
Length = 327
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 209/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW ++ +AQ + +K+ +N + ++ L +E D L E
Sbjct: 2 ADPDFWGDQQKAQTIINEANALKEYVNTYKELSESHEELQMTHDLLKE--DPDEDLQNEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 ENELKSLTKKFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP EE +D++I ED+++ RA G GGQ+VN ++AVRITH+PTGV V C ER
Sbjct: 180 CDVMPEFNEE-IDIEIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTGVIVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNRERAMKMLKSKLYQRRIEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDSFIDAYLRSKLS 327
>gi|383788715|ref|YP_005473284.1| peptide chain release factor 2 [Caldisericum exile AZM16c01]
gi|381364352|dbj|BAL81181.1| peptide chain release factor 2 [Caldisericum exile AZM16c01]
Length = 363
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 235/353 (66%), Gaps = 5/353 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+++E + L++ E + LE K + FW + +++ETL+ L+ K +I +T
Sbjct: 15 EKIEALLDPVWLKEHEDAVKALESKTLNPDFWKS-PDSKETLKLLSMTKKEIAKFKQLET 73
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+D T+++L EE + +EA ++ + NK + +FE+ + LS PYD A +S +
Sbjct: 74 VKNDLNTLLELYEEAEEHLD---KEAQEVLFDANKLVKEFEIERFLSEPYDDLNAFVSFS 130
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
+GAGG DAQDW +MLL+MY+R+ EK+ ++ +++++++GEEAGIKSA + V+G +AYG L
Sbjct: 131 SGAGGVDAQDWTEMLLKMYLRFFEKKGFEAKIIDQTVGEEAGIKSATVYVKGEFAYGLLK 190
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
GE G HR+VR SPF+A R TSF+ EV+P L E D++I E+DL+I RA G GGQ
Sbjct: 191 GESGVHRLVRISPFDANRRRHTSFALVEVVPDLGEVE-DIEIDEKDLKIEIFRASGHGGQ 249
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NV KVETAVRITHIPTG+T C +ERSQ NK A+ LK++L+++ ++++ +K ++G
Sbjct: 250 NVQKVETAVRITHIPTGITATCQDERSQTQNKAMAMKILKSRLMLLEKKKQEETLKGLKG 309
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
EWG +IR+YV PYKLVKD RTG E ++ V++GEL+ FI +YLK K
Sbjct: 310 AFRSIEWGNEIRSYVLQPYKLVKDHRTGVEIGNVDEVLEGELDEFIWAYLKSK 362
>gi|347534212|ref|YP_004840882.1| peptide chain release factor 2 [Lactobacillus sanfranciscensis TMW
1.1304]
gi|345504268|gb|AEN98950.1| Peptide chain release factor 2 [Lactobacillus sanfranciscensis TMW
1.1304]
Length = 352
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 218/342 (63%), Gaps = 3/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L + ++ E K A++ FWDN+ +AQ+ + ++K K + + +D + L
Sbjct: 9 LDHLNEAISINEGKMAEAGFWDNQRKAQKVIDENNELKAKYDTFHQLVEEYEDLEVTLSL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
D DA L EE + ++ K + ++L LL+G YDK A++ I GAGGT+A+DW
Sbjct: 69 ISTED--DAELEEEFNETLAKVEKHIQNYKLNLLLNGKYDKNNAIVEIHPGAGGTEAEDW 126
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
ADMLLRMY RW ++ +K V + GE AG+ S V G+ AYGYL EKG HR+VR
Sbjct: 127 ADMLLRMYTRWADQNGFKVEVDDYQPGEVAGLSSVTFTVSGQNAYGYLKSEKGIHRLVRL 186
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ VMP L +E+++V I +DL I R+ G GGQ++NK +AVRI
Sbjct: 187 SPFDSAGRRHTSFASVNVMPEL-DENVNVDINPDDLRIDVFRSSGAGGQHINKTSSAVRI 245
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ +RSQL N++ A++ LK+KL + EE++A E +I G ++ WG QI
Sbjct: 246 THLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELEEEKKAEEKAKIEGKQLEIGWGSQI 305
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RTGHET++ +VMDG+L PFI YL++K
Sbjct: 306 RSYVFHPYTMVKDHRTGHETANGKAVMDGDLNPFINDYLQWK 347
>gi|443630926|ref|ZP_21115107.1| peptide chain release factor 2 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348731|gb|ELS62787.1| peptide chain release factor 2 [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 327
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 215/331 (64%), Gaps = 7/331 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLNESHEELQMTHDLLKEEPDQDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E
Sbjct: 58 ELEKELKALTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ +K ++ G+EAGIKS + ++G AYGY+ EKG HR+VR SPF++ G R TSF
Sbjct: 118 RRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C
Sbjct: 178 VSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD
Sbjct: 237 ERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 297 HRTNTEMGNVQAVMDGDIDTFIDAYLRSKLS 327
>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
gi|422689171|ref|ZP_16747283.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
gi|422731554|ref|ZP_16787912.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
Length = 327
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 207/325 (63%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E DA + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDAEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T +ET ++ +VMDG+L+ FI +YLK
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLK 323
>gi|238916331|ref|YP_002929848.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
gi|238871691|gb|ACR71401.1| peptide chain release factor RF-2 [Eubacterium eligens ATCC 27750]
Length = 372
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 213/348 (61%), Gaps = 3/348 (0%)
Query: 20 EIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDD 79
+I+ S L +K + ELE FWDN ++Q ++ L +KD + +T +DD
Sbjct: 20 QIKKSLDLDNKQKRIEELEADMEAPGFWDNPDKSQNAMKELKGLKDAFERYNELETGLDD 79
Query: 80 AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
T++++ EE S D L+ E I L ++ + LLSG +D A++++ AGAG
Sbjct: 80 VKTLIEMAEE--SNDQSLIPEIEEEITNLEDKMESLRIETLLSGEHDACDAILTLHAGAG 137
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
GT++ DW ML RMY RW E Y T ++ GEEAGIKS IE+ G AYG+L E G
Sbjct: 138 GTESCDWCQMLFRMYTRWAESHGYTTETLDYLEGEEAGIKSVTIEIRGENAYGHLKSEHG 197
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNK 259
HR+VR SPFNA G RQTSF +VMP + + +D++I ++DL I R+ G GGQ++NK
Sbjct: 198 VHRLVRISPFNAAGKRQTSFVSCDVMPDI-NQDIDIEINDDDLRIDTYRSSGAGGQHINK 256
Query: 260 VETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK 319
+A+RITH+PTG+ V+C ERSQ NK KA+ LKAKL ++ E + A + IRGD
Sbjct: 257 TSSAIRITHLPTGIVVQCQNERSQHQNKDKAMQMLKAKLYLLKEAENAENLSGIRGDVKD 316
Query: 320 AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+G QIR+YV PY +VKD RT E ++ SV+DG ++PFI +YL +
Sbjct: 317 INFGSQIRSYVLQPYTMVKDNRTNKEVANAGSVLDGNIDPFINAYLTW 364
>gi|322374638|ref|ZP_08049152.1| peptide chain release factor 2 [Streptococcus sp. C300]
gi|321280138|gb|EFX57177.1| peptide chain release factor 2 [Streptococcus sp. C300]
Length = 329
Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 143/334 (42%), Positives = 216/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQ----LTELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+ KL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQTKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|383643884|ref|ZP_09956290.1| peptide chain release factor 2 [Streptomyces chartreusis NRRL
12338]
Length = 368
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 235/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLAVLFEMAEEEDDPDTRA--EAESELVAVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT + E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E+S V I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQSDHVDIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVRITHIPTG+ V C ERSQ+ N+ A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEFEVGNPEAVFNGEIQGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
Length = 369
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/366 (43%), Positives = 237/366 (64%), Gaps = 11/366 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S + I A L +L E+A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMGSIEAVLDLDKLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L +EMD DA L EA + + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKTETLRGRIDDLAVLFELAQEMD--DADTLAEAENELTSVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
+ A+++I A AGG DA D+A+ L RMY+RW E+ Y T V E S EEAGIKS V
Sbjct: 123 AEREALVNIRAEAGGVDASDFAERLQRMYLRWAERHGYPTEVYETSYAEEAGIKSTTFVV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E S V+I E +L I
Sbjct: 183 KAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-ESSDHVEIDEGELRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ VN ++AVRITH+PTG+ V C ERSQ+ NK A++ L+AKLL E+
Sbjct: 242 VYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKLL----ER 297
Query: 306 RASEIKQIRGDAVK---AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
R E +Q + DA+K + WG Q+R+YV HPY++VKD+RT E + +V+DGE++ F++
Sbjct: 298 RRQE-EQAKMDALKDGGSSWGNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLE 356
Query: 363 SYLKYK 368
+ ++++
Sbjct: 357 AGIRWR 362
>gi|49478907|ref|YP_039176.1| peptide chain release factor 2 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140380|ref|YP_086452.1| peptide chain release factor 2 [Bacillus cereus E33L]
gi|118480225|ref|YP_897376.1| peptide chain release factor 2 [Bacillus thuringiensis str. Al
Hakam]
gi|228923910|ref|ZP_04087187.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228930187|ref|ZP_04093196.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228948905|ref|ZP_04111178.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228955423|ref|ZP_04117428.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228961413|ref|ZP_04123027.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229050846|ref|ZP_04194398.1| Peptide chain release factor 2 [Bacillus cereus AH676]
gi|229072632|ref|ZP_04205834.1| Peptide chain release factor 2 [Bacillus cereus F65185]
gi|229082391|ref|ZP_04214854.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
gi|229094280|ref|ZP_04225356.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
gi|229112593|ref|ZP_04242130.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
gi|229124692|ref|ZP_04253873.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
gi|229130431|ref|ZP_04259388.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
gi|229147710|ref|ZP_04276053.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
gi|229153340|ref|ZP_04281518.1| Peptide chain release factor 2 [Bacillus cereus m1550]
gi|229181440|ref|ZP_04308768.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
gi|229187396|ref|ZP_04314539.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
gi|229193426|ref|ZP_04320374.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
gi|229199302|ref|ZP_04325969.1| Peptide chain release factor 2 [Bacillus cereus m1293]
gi|296505600|ref|YP_003667300.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
gi|301056649|ref|YP_003794860.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
str. CI]
gi|423411078|ref|ZP_17388198.1| peptide chain release factor 2 [Bacillus cereus BAG3O-2]
gi|423427270|ref|ZP_17404301.1| peptide chain release factor 2 [Bacillus cereus BAG3X2-2]
gi|423433137|ref|ZP_17410141.1| peptide chain release factor 2 [Bacillus cereus BAG4O-1]
gi|423438579|ref|ZP_17415560.1| peptide chain release factor 2 [Bacillus cereus BAG4X12-1]
gi|423506938|ref|ZP_17483527.1| peptide chain release factor 2 [Bacillus cereus HD73]
gi|449092236|ref|YP_007424677.1| PrfB [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|49330463|gb|AAT61109.1| peptide chain release factor [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|51973849|gb|AAU15399.1| peptide chain release factor 2 (RF-2) [Bacillus cereus E33L]
gi|118419450|gb|ABK87869.1| bacterial peptide chain release factor 2 (bRF-2) [Bacillus
thuringiensis str. Al Hakam]
gi|228584162|gb|EEK42313.1| Peptide chain release factor 2 [Bacillus cereus m1293]
gi|228590081|gb|EEK47952.1| Peptide chain release factor 2 [Bacillus cereus ATCC 10876]
gi|228596100|gb|EEK53777.1| Peptide chain release factor 2 [Bacillus cereus BGSC 6E1]
gi|228602015|gb|EEK59508.1| Peptide chain release factor 2 [Bacillus cereus 172560W]
gi|228629944|gb|EEK86595.1| Peptide chain release factor 2 [Bacillus cereus m1550]
gi|228635723|gb|EEK92210.1| Peptide chain release factor 2 [Bacillus cereus BDRD-ST24]
gi|228653026|gb|EEL08907.1| Peptide chain release factor 2 [Bacillus cereus BDRD-Cer4]
gi|228658787|gb|EEL14446.1| Peptide chain release factor 2 [Bacillus cereus 95/8201]
gi|228670973|gb|EEL26280.1| Peptide chain release factor 2 [Bacillus cereus Rock1-15]
gi|228689133|gb|EEL42956.1| Peptide chain release factor 2 [Bacillus cereus Rock3-42]
gi|228700823|gb|EEL53346.1| Peptide chain release factor 2 [Bacillus cereus Rock4-2]
gi|228710608|gb|EEL62581.1| Peptide chain release factor 2 [Bacillus cereus F65185]
gi|228722502|gb|EEL73895.1| Peptide chain release factor 2 [Bacillus cereus AH676]
gi|228798298|gb|EEM45297.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228804215|gb|EEM50829.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228810661|gb|EEM57009.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228829472|gb|EEM75100.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228835709|gb|EEM81073.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296326652|gb|ADH09580.1| peptide chain release factor 2 [Bacillus thuringiensis BMB171]
gi|300378818|gb|ADK07722.1| peptide chain release factor 2 [Bacillus cereus biovar anthracis
str. CI]
gi|401108094|gb|EJQ16026.1| peptide chain release factor 2 [Bacillus cereus BAG3O-2]
gi|401109455|gb|EJQ17379.1| peptide chain release factor 2 [Bacillus cereus BAG3X2-2]
gi|401113049|gb|EJQ20921.1| peptide chain release factor 2 [Bacillus cereus BAG4O-1]
gi|401116194|gb|EJQ24036.1| peptide chain release factor 2 [Bacillus cereus BAG4X12-1]
gi|402445749|gb|EJV77617.1| peptide chain release factor 2 [Bacillus cereus HD73]
gi|449025993|gb|AGE81156.1| PrfB [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 326
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|30023221|ref|NP_834852.1| peptide chain release factor 2 [Bacillus cereus ATCC 14579]
gi|376269083|ref|YP_005121795.1| Peptide chain release factor 2 [Bacillus cereus F837/76]
gi|423554367|ref|ZP_17530693.1| peptide chain release factor 2 [Bacillus cereus ISP3191]
gi|423583335|ref|ZP_17559446.1| peptide chain release factor 2 [Bacillus cereus VD014]
gi|423589005|ref|ZP_17565091.1| peptide chain release factor 2 [Bacillus cereus VD045]
gi|423608477|ref|ZP_17584369.1| peptide chain release factor 2 [Bacillus cereus VD102]
gi|423631921|ref|ZP_17607668.1| peptide chain release factor 2 [Bacillus cereus VD154]
gi|423633970|ref|ZP_17609623.1| peptide chain release factor 2 [Bacillus cereus VD156]
gi|423644339|ref|ZP_17619956.1| peptide chain release factor 2 [Bacillus cereus VD166]
gi|423651027|ref|ZP_17626597.1| peptide chain release factor 2 [Bacillus cereus VD169]
gi|423658093|ref|ZP_17633392.1| peptide chain release factor 2 [Bacillus cereus VD200]
gi|29898781|gb|AAP12053.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus cereus
ATCC 14579]
gi|364514883|gb|AEW58282.1| Peptide chain release factor 2 [Bacillus cereus F837/76]
gi|401181165|gb|EJQ88318.1| peptide chain release factor 2 [Bacillus cereus ISP3191]
gi|401209395|gb|EJR16154.1| peptide chain release factor 2 [Bacillus cereus VD014]
gi|401225393|gb|EJR31942.1| peptide chain release factor 2 [Bacillus cereus VD045]
gi|401238486|gb|EJR44927.1| peptide chain release factor 2 [Bacillus cereus VD102]
gi|401263143|gb|EJR69276.1| peptide chain release factor 2 [Bacillus cereus VD154]
gi|401271404|gb|EJR77421.1| peptide chain release factor 2 [Bacillus cereus VD166]
gi|401280347|gb|EJR86268.1| peptide chain release factor 2 [Bacillus cereus VD169]
gi|401281876|gb|EJR87781.1| peptide chain release factor 2 [Bacillus cereus VD156]
gi|401288345|gb|EJR94098.1| peptide chain release factor 2 [Bacillus cereus VD200]
Length = 325
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 179 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 237
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 238 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 297
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 298 TNTEVGNVQAVMDGEIDPFIDAYLR 322
>gi|414158170|ref|ZP_11414464.1| peptide chain release factor 2 [Streptococcus sp. F0441]
gi|410870715|gb|EKS18672.1| peptide chain release factor 2 [Streptococcus sp. F0441]
Length = 325
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDKMMTNYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
S + VMDG+L+ FI +YLK++ S
Sbjct: 301 VSQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|373463798|ref|ZP_09555381.1| peptide chain release factor 2 [Lactobacillus kisonensis F0435]
gi|371763879|gb|EHO52329.1| peptide chain release factor 2 [Lactobacillus kisonensis F0435]
Length = 354
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 3/341 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + +A E K A+ FWDN+ AQ+ + +K K + K+DD ++L E
Sbjct: 12 LSESIAINEAKMAEPGFWDNQETAQKLIDETNQMKTKRDSFNALVAKLDDLKVTLELISE 71
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
+D+G+ EE +L L +++L LL+G YD A++ I GAGGT++QDW M
Sbjct: 72 --DSDSGMQEEFQDDSADLQAKLQRYQLGLLLNGKYDHNNAILEIHPGAGGTESQDWGSM 129
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW E + ++ +G+ AGI S + + G AYGYL EKG HR+VR SPF
Sbjct: 130 LLRMYTRWAEAHGFTVATLDYQVGDVAGINSVSLLISGADAYGYLRSEKGVHRLVRISPF 189
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF+ +VMP L ++ + + I +DL++ R+ G GGQ+VNK +AVRITHI
Sbjct: 190 DSAGRRHTSFASVDVMPELNDD-VTININPDDLKVDVYRSSGAGGQHVNKTSSAVRITHI 248
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V +RSQL N+ A++ LK+KL +E++ +E +I G+ WG QIR+Y
Sbjct: 249 PTGIVVASQAQRSQLQNRQTAMNMLKSKLYEREQEKKQAEKDKIEGEQKDIGWGSQIRSY 308
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VFHPY +VKD RTG+ET+++ VMDG+L+PFI +YL+++ S
Sbjct: 309 VFHPYSMVKDHRTGYETANVNGVMDGDLDPFINAYLQWQLS 349
>gi|421206200|ref|ZP_15663264.1| peptide chain release factor 2 [Streptococcus pneumoniae 2090008]
gi|421210707|ref|ZP_15667695.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070035]
gi|421231521|ref|ZP_15688168.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080076]
gi|421291559|ref|ZP_15742299.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56348]
gi|421311502|ref|ZP_15762109.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58981]
gi|395574580|gb|EJG35157.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070035]
gi|395577280|gb|EJG37825.1| peptide chain release factor 2 [Streptococcus pneumoniae 2090008]
gi|395596620|gb|EJG56836.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080076]
gi|395894861|gb|EJH05838.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56348]
gi|395912080|gb|EJH22943.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58981]
Length = 325
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 214/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
Length = 370
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 221/355 (62%), Gaps = 3/355 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
VEA ++R+ +R S + L +++ ELE + A FWD+ AQ+ L+ T ++ +
Sbjct: 9 VEAMAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASW 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+++D +++L E + D L E + +L K L E ++LSGP+D
Sbjct: 69 DRLNRQVEDIRVLIELGSEAE--DEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSC 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
SI +GAGGT++QDWA+MLLRMY+R+ E++ +KT + + G+EAG+K V G YA
Sbjct: 127 FFSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL E G HR+VR SPF++ R TSF+ V P + E+ +DV+I E DL + R+
Sbjct: 187 YGYLKAEVGIHRLVRISPFDSNARRHTSFASVFVFPEI-EDDIDVKIVETDLRVDTFRSS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VN ++A+RITHIPTG+ V C ERSQ N+ A+ L+AKL ++R S+
Sbjct: 246 GAGGQHVNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQA 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+I G+ + WG QIR+YV HPYK+VKD+RTG E+ + +V+DGELE FI ++L
Sbjct: 306 AEIAGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFL 360
>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
Length = 370
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/342 (44%), Positives = 224/342 (65%), Gaps = 4/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+ +L + ELE +AAD S WD+ AQ+ AL+ + K+ + + ++DD + +L
Sbjct: 25 VDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDSLRGRLDDLSVMYEL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE +DA +E A + EL A++ E+T +LSGPYD+ AVI+I +GAGG DA DW
Sbjct: 85 AEEESDSDA--VEMADAERAELRAAIESLEVTTMLSGPYDEREAVINIRSGAGGVDAADW 142
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW +K +K V + S EEAGIKSA V G Y YG LS E+G HR+VR
Sbjct: 143 AEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTLSVEQGAHRLVRI 202
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+ + EE+ + IPE DL I R+ G GGQ+VN ++AVR+
Sbjct: 203 SPFDNQGRRQTSFAEVEVL-PVVEETDHIDIPESDLRIDVYRSSGPGGQSVNTTDSAVRL 261
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V C E+SQ NK A+ L+AKLL ++ +E+ + G A WG Q+
Sbjct: 262 THVPTGIVVTCQNEKSQHQNKASAMRVLQAKLLEKKRQEERAELDAL-GAGGNASWGNQM 320
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV HPY++VKD+RT +E ++ SV+DG+L+ FI++ ++++
Sbjct: 321 RSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFIEAGIRWR 362
>gi|157693929|ref|YP_001488391.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
gi|157682687|gb|ABV63831.1| peptide chain release factor RF2 [Bacillus pumilus SAFR-032]
Length = 327
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+++ FW+++ +AQ + +KD +N + ++ L +E D L E
Sbjct: 2 SEADFWNDQQKAQGVINEANALKDNVNAYHELSESHEELQMTHDLLKE--DYDEELHVEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 EKELKNLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITHIPT V V C ER
Sbjct: 180 CDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNRERAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+L+ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDLDSFIDAYLRSKLS 327
>gi|407980384|ref|ZP_11161173.1| peptide chain release factor RF2 [Bacillus sp. HYC-10]
gi|407412865|gb|EKF34620.1| peptide chain release factor RF2 [Bacillus sp. HYC-10]
Length = 327
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+++ FW+++ +AQ + +KD +N + ++ L +E D L E
Sbjct: 2 SEADFWNDQQKAQGVINEANALKDYVNTYHELSESHEELQMTHDLLKE--DYDEELHAEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 EKELKSLTKQFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITHIPT V V C ER
Sbjct: 180 CDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHIPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNRERAMKMLKSKLYQKRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+L+ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDLDSFIDAYLRSKLS 327
>gi|399923642|ref|ZP_10781000.1| hypothetical protein Prhi1_00305 [Peptoniphilus rhinitidis 1-13]
Length = 371
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 235/367 (64%), Gaps = 3/367 (0%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q+ Y ++ +E + + + S + L+ ++ EL K + FWD+ AQ+ +
Sbjct: 3 QNIYLDKERLENSKNTTLALGDSLEISSLKDKVVELNKKQMEPGFWDDNDSAQKIINETN 62
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
+ KI+ + + DA +++L E + D ++ ++++E+ K +F+L LL
Sbjct: 63 SYQKKIDQYDELNKLITDAEDLIELMEIEE--DYSSYDDFRNLVEEIEKKTTEFKLNTLL 120
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
+G YD A++SI AGAGGT+AQDWA MLLRMY R+ E + +K ++ +EAGIKS
Sbjct: 121 NGEYDSHNAILSIHAGAGGTEAQDWASMLLRMYSRYAENKGFKIETLDILKEDEAGIKSV 180
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
+++ G AYGYL GEKG HR+VR SPF++ R TSFS +V P L +++ DV+I EE+
Sbjct: 181 TLKISGDNAYGYLKGEKGVHRLVRISPFDSNKRRHTSFSSVDVFPELDDDT-DVEIKEEE 239
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
L+I R+ G GGQ+VN ++AVRITHIPTG+ V+C ERSQ+ N+ KA++ LKAKL+ +
Sbjct: 240 LKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLIAL 299
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
AEE++ +I+ ++G+ + WG QIR+YVF PY +VKD RT + D+ VMDG+L+ FI
Sbjct: 300 AEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYTMVKDHRTNIDVGDVEKVMDGDLDVFI 359
Query: 362 KSYLKYK 368
+YL+ K
Sbjct: 360 NAYLQDK 366
>gi|28896314|ref|NP_802664.1| peptide chain release factor 2 [Streptococcus pyogenes SSI-1]
gi|28811565|dbj|BAC64497.1| putative peptide chain release factor 2 [Streptococcus pyogenes
SSI-1]
Length = 337
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/339 (42%), Positives = 219/339 (64%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE + FW++ AQ+T Q L ++K K + + + D+ ++++ +E
Sbjct: 1 MEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE + +L+K +E+T LLS PYD A++ I G+GGT+AQDW D+
Sbjct: 61 ----DDFLKEELEENLMQLDKITGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDL 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT E + + VMDGE+ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLKWR 334
>gi|408356032|ref|YP_006844563.1| peptide chain release factor 2 [Amphibacillus xylanus NBRC 15112]
gi|407726803|dbj|BAM46801.1| peptide chain release factor 2 [Amphibacillus xylanus NBRC 15112]
Length = 349
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 218/345 (63%), Gaps = 6/345 (1%)
Query: 25 AGLQQLEK---ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAV 81
GL LEK ++A+LE + +FWD++ AQ+ + + +K+ + +++
Sbjct: 5 GGLFDLEKKRADIADLENEMTAPNFWDDQKNAQKIIDQVNHLKNLVQTFDQHVEALENLE 64
Query: 82 TIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGT 141
+ +E D D L +E +++L K L+Q+EL LLS P+DK A++ + GAGGT
Sbjct: 65 VTYEFVKEED--DQELRQELNEELEKLIKDLNQYELLILLSDPHDKNNAILELHPGAGGT 122
Query: 142 DAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTH 201
++QDWA +LLRMY RW E + +K + GEEAG+KS + ++G AYGYL EKG H
Sbjct: 123 ESQDWASLLLRMYTRWAEHKNFKVETLNYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVH 182
Query: 202 RIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVE 261
R+VR SPF++ G R TSF EV P L ++ +D++I E+++I RA G GGQ+VN +
Sbjct: 183 RLVRISPFDSSGRRHTSFVSCEVTPELNDD-IDIEIKSEEIKIDTYRASGAGGQHVNTTD 241
Query: 262 TAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE 321
+AVRITHIPT V C ERSQ+ N+ +AL LK+KL + E++ +E+ ++RG+
Sbjct: 242 SAVRITHIPTDTVVTCQSERSQIKNREQALKMLKSKLYQLEIEKQQAELNELRGEQKDIG 301
Query: 322 WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
WG QIR+YVFHPY ++KD RT E + SVMDG ++PFI +YL+
Sbjct: 302 WGSQIRSYVFHPYSMIKDHRTNLEIGNTQSVMDGGIDPFIDAYLR 346
>gi|384267063|ref|YP_005422770.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387900157|ref|YP_006330453.1| Peptide chain release factor [Bacillus amyloliquefaciens Y2]
gi|380500416|emb|CCG51454.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387174267|gb|AFJ63728.1| Peptide chain release factor [Bacillus amyloliquefaciens Y2]
Length = 327
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 207/329 (62%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +K+ +N ++ L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKE--DPDQDLQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K L++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E+
Sbjct: 60 EKELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
gi|397700070|ref|YP_006537858.1| peptide chain release factor 2 [Enterococcus faecalis D32]
gi|422695176|ref|ZP_16753164.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
gi|422704670|ref|ZP_16762480.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
gi|397336709|gb|AFO44381.1| peptide chain release factor 2 [Enterococcus faecalis D32]
Length = 327
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E D + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDTEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
WAL-14163]
gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
gi|355624996|ref|ZP_09047980.1| peptide chain release factor 2 [Clostridium sp. 7_3_54FAA]
gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
WAL-14163]
gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
gi|354821641|gb|EHF06026.1| peptide chain release factor 2 [Clostridium sp. 7_3_54FAA]
Length = 335
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 206/322 (63%), Gaps = 3/322 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ + +T++ ++KD + + + +D ++++ E D ++ E ++
Sbjct: 6 FWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYE--ENDPSMIPEIQEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
E +L+ LLSG YD A++ + AGAGGT+A DW ML RMY RW +K+ Y T
Sbjct: 64 DEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKGYTT 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS +++ G A+GYL EKG HR+VR SPFNA G RQTSF +VM
Sbjct: 124 EVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + EE +D+++ ++DL I R+ G GGQ++NK +A+RITHIPTG+ V+C ERSQ
Sbjct: 184 PDI-EEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKL ++ +++ A ++ IRGD +G QIR+YV PY LVKD RT E
Sbjct: 243 NKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRTNAE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKY 367
++ +VMDG+++ FI +YLK+
Sbjct: 303 NGNVNAVMDGDIDLFISAYLKW 324
>gi|423484791|ref|ZP_17461480.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-2]
gi|401137377|gb|EJQ44959.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-2]
Length = 326
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 209/325 (64%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITHIPT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHIPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE+ PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEINPFIDAYLR 323
>gi|289168241|ref|YP_003446510.1| peptide chain release factor 2 [Streptococcus mitis B6]
gi|288907808|emb|CBJ22648.1| peptide chain release factor 2 [Streptococcus mitis B6]
Length = 325
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHEELVTQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 SELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
acidaminovorans]
gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 340
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/334 (43%), Positives = 215/334 (64%), Gaps = 3/334 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ ELE K FW+++ +A++ + L+ ++D++ L T + T + L +E
Sbjct: 2 IMELEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDE--DF 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
+A LL EA S + + +++ E+ L+ YD A+++I +GAGGT++QDWA+MLLRM
Sbjct: 60 NAELLAEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRM 119
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y W EK Y +++ GEEAG+KS +E++G YAYG L E G HR+VR SPFNA+G
Sbjct: 120 YAHWAEKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQG 179
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+ V P +E ++++I +DL+I RA G GGQ VN ++AVRITH+PT +
Sbjct: 180 KRQTSFASVFVYPEF-DEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNI 238
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
TV C ERSQ+ N+ KA+S LK++L EEQR E K + + WG QIR+YVFHP
Sbjct: 239 TVTCQNERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHP 298
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
Y+++KD RT +ET ++ VM+G+L FI ++LKY
Sbjct: 299 YQMIKDHRTNYETGNVDKVMNGDLNDFIYAWLKY 332
>gi|403383557|ref|ZP_10925614.1| peptide chain release factor 2 [Kurthia sp. JC30]
Length = 326
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/324 (44%), Positives = 203/324 (62%), Gaps = 3/324 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D SFW+++++AQ + +KD +N + + + + L + D +LEE
Sbjct: 3 DPSFWNDQSKAQAIINESKGLKDIVNEF--YALQGEQEELEMTLELLKEEMDDDMLEELG 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+ + +FEL L+SGPYDK A++ + GAGGT++QDW MLLRMY RW EK
Sbjct: 61 EAMHAFEARVAEFELQLLMSGPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKHD 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+K +++ G+EAG+KS I V G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 121 FKVEMLDYLAGDEAGLKSVTIAVRGHNAYGYLKAEKGVHRLVRISPFDSAGRRHTSFVSC 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
++MP +E + V I EDL+I RA G GGQ++NK E+AVRITH+PT V C ERS
Sbjct: 181 DIMPEFTDEVV-VDIRTEDLKIDTYRASGAGGQHINKTESAVRITHLPTNTVVACQAERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
QL N+ A+ L+AKL + E++ + +IRG+ + W QIR+YVFHPY +VKD RT
Sbjct: 240 QLKNRETAMKMLQAKLYQLKLEEKQEHLDEIRGEQKEIGWSSQIRSYVFHPYSMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLK 366
ET ++ +VMDG+L+PFI +YL+
Sbjct: 300 NEETGNVQAVMDGDLDPFINAYLR 323
>gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1]
gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1]
Length = 329
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/330 (43%), Positives = 213/330 (64%), Gaps = 5/330 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD++ AQ + +KD + + + ++ +L +E D L
Sbjct: 1 MAAPD--FWDDQKAAQSVISEANALKDLVGEFRSLEERFENLEVTYELVKE--EPDEELQ 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
+E + K+L+K +FEL LL+ PYDK A++ + GAGGT++QDWA MLLRMY RW
Sbjct: 57 KELVAEAKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ YK ++ GEEAG+KS + ++G AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 117 EKKGYKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F EV+P ++++++ + +++++ R+ G GGQ+VN ++AVRITHIPTG+ V C
Sbjct: 177 FVSCEVVPEF-DDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ KA++ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVK
Sbjct: 236 SERSQIKNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
D RT E ++ +VMDGE++ FI +YL+ K
Sbjct: 296 DHRTNTEVGNVQAVMDGEIDVFIDAYLRSK 325
>gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
Length = 313
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/310 (46%), Positives = 209/310 (67%), Gaps = 3/310 (0%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
+Q LT +K+++ D + ++ A +++L E D L + A+ ++ + + + Q E
Sbjct: 1 MQRLTRLKEEVTAWNDLERRIASAAELIELAEL--EGDESLTADLAAEVQAIQREVAQRE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
L LLSGPYD A +S+ AG GGTDAQDWA MLLRMY RW E++ Y +++ S GEEA
Sbjct: 59 LEILLSGPYDDRDAFLSVQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKSA IE+ G YAYGY E G HR++R SPFNA RQTSF+ EVMP + +++ +V+
Sbjct: 119 GIKSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEV-DDAPEVE 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
I EDL I R+GG GGQ VN ++AVRITH+PTG+ V C ERSQ+ N+ A+ L+A
Sbjct: 178 IKPEDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRA 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
+LL +++A E ++RG+ +A +G Q+R Y HP LVKD RT +ETS++ +V+DGE
Sbjct: 238 RLLERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGE 297
Query: 357 LEPFIKSYLK 366
++PFI+++L+
Sbjct: 298 IDPFIEAFLR 307
>gi|408829971|ref|ZP_11214861.1| peptide chain release factor 2 [Streptomyces somaliensis DSM 40738]
Length = 368
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 227/348 (65%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A L ++ ++A LE +AA S WD+ AQ+ L+ ++ ++ + ++DD
Sbjct: 20 IEAVLDLDKMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAEVRKAETLRGRIDDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+ +L E D D L EA + + + KALD+ E+ LLSG YD+ A+++I A AGG
Sbjct: 80 AVLFELAEAEDDPDT--LAEAEAELAAVRKALDEMEVRTLLSGEYDEREALVTIRAEAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ L RMY+RW E+ YKT + E S EEAGIKS V YAYG LS E+GT
Sbjct: 138 VDASDFAERLQRMYLRWAERHDYKTEIYETSYAEEAGIKSTTFVVHAPYAYGTLSVEQGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G EV+P++ E++ ++IPE DL I R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIPENDLRIDVYRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVRITHIPTGV V C E+SQ+ NK A+ L+A+LL ++ +++ ++GD +
Sbjct: 257 DSAVRITHIPTGVVVSCQNEKSQIQNKASAMRVLQARLLERQRQEERAKMDALKGDG-GS 315
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV HPY++VKD+RT HE + +V+DGE++ F+++ ++++
Sbjct: 316 SWGNQMRSYVLHPYQMVKDLRTEHEVGNPQAVLDGEIDAFLEAGIRWR 363
>gi|418968754|ref|ZP_13520157.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383352544|gb|EID30236.1| peptide chain release factor 2 [Streptococcus pseudopneumoniae ATCC
BAA-960]
Length = 329
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+T Q L ++K+ N + D+ ++ E +S
Sbjct: 1 MENKMTEPDFWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAEDESVQEE 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L+E+ A EL+K + +E+T LLS YD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 61 LVEQLA----ELDKMMTSYEMTLLLSELYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|398308472|ref|ZP_10511946.1| peptide chain release factor 2 [Bacillus mojavensis RO-H-1]
Length = 327
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 215/331 (64%), Gaps = 7/331 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K++++ +++T ++ + D L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLNESHEELQMTHDLLKEEPDHDLQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E
Sbjct: 58 ELEKELKALTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ +K ++ G+EAGIKS + ++G AYGY+ EKG HR+VR SPF++ G R TSF
Sbjct: 118 RRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EVMP +E +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C
Sbjct: 178 VSCEVMPEFNDE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD
Sbjct: 237 ERSQIKNRERAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 297 HRTNTEMGNVQAVMDGDIDVFIDAYLRSKLS 327
>gi|387909591|ref|YP_006339897.1| peptide chain release factor 2 [Streptococcus thermophilus
MN-ZLW-002]
gi|387574526|gb|AFJ83232.1| peptide chain release factor 2 [Streptococcus thermophilus
MN-ZLW-002]
Length = 337
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 224/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + K D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKIKYETFNNMKELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS E +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWA+M
Sbjct: 61 DDSVQE----ELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + V+DG++E FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVIDGDIEGFIDAYLKWR 334
>gi|326389631|ref|ZP_08211197.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
200]
gi|325994346|gb|EGD52772.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus JW
200]
Length = 330
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 217/327 (66%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW + ++QE + +K+ + +K +D T+++L +D D + +E
Sbjct: 2 SDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLNTLIELG--LDEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
KEL K L+ ++ LL+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW +
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ GEEAGIKS + ++G +AYGYL E G HR+VR SPF+A G R TSF+
Sbjct: 120 GFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFAL 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P L E ++V+I EDL+I RA G GGQ VNK E+AVRITH+PTG+ V C ER
Sbjct: 180 VEVLPEL-ENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKLL + +++ +I+ ++G+ +A WG QIR+YVF PY LVKD R
Sbjct: 239 SQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T +E ++ +VMDGE++ FI +YLK K
Sbjct: 299 TNYEVGNVQAVMDGEIDGFINAYLKQK 325
>gi|295134177|ref|YP_003584853.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
gi|294982192|gb|ADF52657.1| peptide chain release factor 2 [Zunongwangia profunda SM-A87]
Length = 365
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 227/358 (63%), Gaps = 11/358 (3%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
V+ + R++ ++ ++Q + E+ E K D SFWDN +EA+E ++ L K +N
Sbjct: 7 VKDITTRIDNLQVHLNIEQKQIEIQNEEEKTFDPSFWDNPSEAEEFMKTLKGKKKWVNDY 66
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALD---QFELTQLLSGPYDK 127
K+ +++ +++ E ++ E + +IK+ K LD + E +LS D
Sbjct: 67 NVAKSGLEELQVLLEFYNEGEA-------EESDVIKQYQKILDVVEELEFKNMLSEEGDD 119
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
AV+ ITAGAGGT++ DWA ML+RMY+ W EKQ +K + + G+ AGIK+ +E+EG
Sbjct: 120 LSAVLQITAGAGGTESCDWAQMLMRMYLMWAEKQGFKIKELNYQEGDVAGIKTVTLEIEG 179
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
YA+G+L GE G HR+VR SPF++ R TSF+ V PL+ +++++++I D+EI+ +
Sbjct: 180 DYAFGWLKGENGVHRLVRISPFDSNAKRHTSFASVYVYPLV-DDTIEIEINPADIEITTA 238
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+ G GGQNVNKVET V++ H PTG+ + C+E RSQ N+ +A+ LK++L I E++
Sbjct: 239 RSSGAGGQNVNKVETKVQLVHHPTGIQISCSETRSQHDNRNRAMQMLKSQLYEIELEKQR 298
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ + I K EWG QIRNYV HPYKLVKDVRT ET ++ SVMDG ++ F+K+YL
Sbjct: 299 EQREDIEASKKKIEWGSQIRNYVMHPYKLVKDVRTAEETGNVDSVMDGHIDQFLKAYL 356
>gi|229020397|ref|ZP_04177152.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
gi|229026626|ref|ZP_04182968.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
gi|423388555|ref|ZP_17365781.1| peptide chain release factor 2 [Bacillus cereus BAG1X1-3]
gi|423416927|ref|ZP_17394016.1| peptide chain release factor 2 [Bacillus cereus BAG3X2-1]
gi|228734659|gb|EEL85311.1| Peptide chain release factor 2 [Bacillus cereus AH1272]
gi|228740876|gb|EEL91119.1| Peptide chain release factor 2 [Bacillus cereus AH1273]
gi|401108345|gb|EJQ16276.1| peptide chain release factor 2 [Bacillus cereus BAG3X2-1]
gi|401642630|gb|EJS60336.1| peptide chain release factor 2 [Bacillus cereus BAG1X1-3]
Length = 326
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQTVINEANALKD---MVGSFR-QLDETFENLEMTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ++N ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
Length = 371
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 236/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLAVLFEMAEEEDDPDTRA--EAESELTAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|389576793|ref|ZP_10166821.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
gi|389312278|gb|EIM57211.1| peptide chain release factor 2 [Eubacterium cellulosolvens 6]
Length = 373
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 224/363 (61%), Gaps = 3/363 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
N++ ++ + E+R S L E+ + ELE K + FW+N EAQ+ + L D+K+
Sbjct: 7 NMKAELRTYDQPLVEVRDSLDLASKEQRIEELERKMEEPDFWNNPDEAQKQTKELGDLKN 66
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+ + +D ++++ EE D D ++ E ++ + + LD + LLS Y
Sbjct: 67 DRDTYAKLVSTKEDIEMMIEMGEEED--DESIVPEVREMLDDFIETLDGVRIKTLLSEEY 124
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+I + AGAGGT+A DW ML RMY RW E++ + ++ G+EAGIKS + +V
Sbjct: 125 DVNNAIIRLNAGAGGTEAMDWCGMLYRMYTRWAERKGFAIEELDMQEGDEAGIKSVMFQV 184
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G AYG L E G HR+VR SPFNA+ RQTSF +VMP L ++ +D+++ +ED+ +
Sbjct: 185 NGTNAYGLLKSESGVHRLVRISPFNAQAKRQTSFVSCDVMPELNDD-IDIEVRDEDIRVD 243
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ++NK +A+RITH+PTG+ V C ERSQ NK KA+ LKAKL ++ +E+
Sbjct: 244 TYRSSGAGGQHINKTSSAIRITHLPTGIVVTCQNERSQFQNKDKAMQVLKAKLYMLEQEK 303
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+A + IRG+ WG QIR+YV PY +VKD+RT E + +V+DG+L+PFI +YL
Sbjct: 304 QAEKAAGIRGEVTDIAWGHQIRSYVLQPYTMVKDLRTNAEKAQASAVLDGDLDPFINAYL 363
Query: 366 KYK 368
K++
Sbjct: 364 KWQ 366
>gi|418322606|ref|ZP_12933924.1| peptide chain release factor 2 [Staphylococcus pettenkoferi VCU012]
gi|365231322|gb|EHM72373.1| peptide chain release factor 2 [Staphylococcus pettenkoferi VCU012]
Length = 332
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 208/325 (64%), Gaps = 2/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD SFWD++ +AQE + +K +N D ++ ++D +L E D + ++
Sbjct: 3 ADPSFWDDQNKAQEIIDKNNALKSVVNGFRDLESTLEDMDATRELLAE--EYDEDMKQDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +++ LD FEL LL GPYD A++ + GAGGT++QDW MLLRMY R+ E++
Sbjct: 61 ESDVEDYQSKLDSFELQLLLDGPYDANNAILELHPGAGGTESQDWTSMLLRMYQRYCEQK 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V + G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 121 GFKVEVADYLPGDEAGVKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ER
Sbjct: 181 CDVIPEFDNNEIEIEINPDDISVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 241 SQIKNREAAMKMLKAKLYQLKLEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET + +VMDG++ PFI++YL+
Sbjct: 301 TNTETGKVDAVMDGDIGPFIEAYLR 325
>gi|456012879|gb|EMF46567.1| Peptide chain release factor 2 [Planococcus halocryophilus Or1]
Length = 328
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/326 (44%), Positives = 204/326 (62%), Gaps = 3/326 (0%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
D FW+N+ AQ + L +K+ +N F ++ ++L E D D L +
Sbjct: 4 DPDFWNNQETAQTVISELNGLKEIVNAYYSFVETQENMEMSLELLREEDDED--LHADVD 61
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+K+ L +ELT LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 62 KDMKQFISDLADYELTMLLSEPYDKNNAILELHPGAGGTESQDWCSMLLRMYTRWAEKRG 121
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
+K ++ G+EAG+KS + + G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 122 FKVETLDYLAGDEAGVKSVTLGIRGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 181
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
EVMP E +++ I EDL++ RA G GGQ++N ++AVRITH+PTG V C +ERS
Sbjct: 182 EVMPEFTGE-IEIDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTGAVVTCQQERS 240
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q+ N+ KA+ LKAKL + E+ + + +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 241 QIKNREKAMQMLKAKLYALKIEEEEARLLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYK 368
ET ++ +VMDG+++ FI S L+ K
Sbjct: 301 NFETGNLGAVMDGDIDGFINSLLRSK 326
>gi|408790270|ref|ZP_11201899.1| Peptide chain release factor 2 [Lactobacillus florum 2F]
gi|408520492|gb|EKK20538.1| Peptide chain release factor 2 [Lactobacillus florum 2F]
Length = 355
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/342 (42%), Positives = 211/342 (61%), Gaps = 3/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L QL++ +A E K A FW+N +AQ + K++ N L + +++
Sbjct: 10 LDQLQENIAINEAKMATPDFWENPTQAQALIAVTNHDKERYNQLQSLAENLHSLQDTLEV 69
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E+ DA L E + +A+DQ+ L+ LL+G YD A++ I +GAGGT+A DW
Sbjct: 70 LAEL--PDAELEAEFNKELATEQEAVDQYRLSLLLNGKYDANNAIVEINSGAGGTEACDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RWGE+ ++ VV GE AGI + V G AYGYL EKG HR+VR
Sbjct: 128 TAMLLRMYTRWGEQNGFQVAVVADQPGETAGISQVTLTVTGHNAYGYLKSEKGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+A G R TSF+ +V+P L +E++ V I +DL + R+ G GGQ++NK +AVRI
Sbjct: 188 SPFDAAGRRHTSFASVDVLPEL-DETVQVTINPDDLRVDVFRSSGAGGQHINKTSSAVRI 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ +RSQL N++ A++ LK+KL + E++A E Q+ G ++ WG QI
Sbjct: 247 THLPTGIVTSSQAQRSQLQNRVTAMNMLKSKLYELELEKQAQEKAQLEGKQLEIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY LVKD RT +ET++ +VMDG+L PFI +YL++
Sbjct: 307 RSYVFHPYTLVKDHRTNYETANGKAVMDGDLNPFITAYLQWN 348
>gi|319891756|ref|YP_004148631.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
HKU10-03]
gi|386319904|ref|YP_006016067.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
ED99]
gi|317161452|gb|ADV04995.1| Peptide chain release factor 2 [Staphylococcus pseudintermedius
HKU10-03]
gi|323465075|gb|ADX77228.1| peptide chain release factor 2 [Staphylococcus pseudintermedius
ED99]
Length = 329
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/327 (42%), Positives = 206/327 (62%), Gaps = 2/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FWDN+ AQ + +K +N + +++ + +L +E D + ++
Sbjct: 3 ADPQFWDNQERAQTIIDQNNAIKSVVNNYYEVAETLEEMIATYELLQE--EYDDEMKDDL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +DQFEL LL G +D A++ + GAGGT++QDW +MLLRMY R+ E+Q
Sbjct: 61 EQEVIGFQTKVDQFELQLLLDGEHDANNAILELHPGAGGTESQDWTNMLLRMYQRYCEQQ 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K +V+ G+EAG+KS + V+G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 121 GFKVEIVDYQAGDEAGVKSVTMLVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P E ++V+I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ER
Sbjct: 181 CDVIPEFNNEKIEVEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL + EQ+ E+ IRG+ WG QIR+YVFHPY +VKD R
Sbjct: 241 SQIKNREAAMKMLKAKLYQLELEQKEQELAAIRGEQKDIGWGSQIRSYVFHPYSMVKDHR 300
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET ++ +VMDGE+ PFI++YL+++
Sbjct: 301 TNEETGNVNAVMDGEIGPFIEAYLRHQ 327
>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
DSM 15981]
gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
DSM 15981]
Length = 338
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/334 (41%), Positives = 211/334 (63%), Gaps = 6/334 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ ++ ++ + ++KD + + + + DD ++++ E DA ++ + ++
Sbjct: 6 FWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYE--ENDASVIPDIQEML 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+ L LLSG YDK A++ + AGAGGT++ DW ML RMY RW E++ +K
Sbjct: 64 DHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKGFKY 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS I+V G AYGYL E G HR+VR SPFNA G RQTSF +VM
Sbjct: 124 EVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + E +DV++ +D+ + R+ G GGQ++NK +A+RITH+PTG+ V C ERSQ
Sbjct: 184 PDI-EADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERSQFQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK KA+ LKAKL ++ +++ A++ IRG+ WG QIR+YV PY +VKD RTG E
Sbjct: 243 NKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRTGEE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMSLSASDAN 379
+ ++ +V+DG ++ FI +YL++ MSL + N
Sbjct: 303 SGNVDAVLDGSIDSFISAYLRW---MSLGCPNKN 333
>gi|381180503|ref|ZP_09889342.1| bacterial peptide chain release factor 2 (bRF-2) [Treponema
saccharophilum DSM 2985]
gi|380767491|gb|EIC01491.1| bacterial peptide chain release factor 2 (bRF-2) [Treponema
saccharophilum DSM 2985]
Length = 380
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 221/364 (60%), Gaps = 9/364 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
+LRKD++ ++++ + +E+++ E E K FW++ +AQ+ + L +K
Sbjct: 11 SLRKDIQGVWEKLDP-------ESIERKIKETEAKTLAEGFWNDTEKAQKVMNDLKLLKG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+I D ++ DD T+ +L E D L E + ++ K ++ + LLSG
Sbjct: 64 RIEPWRDLISQADDISTLYELAIEDGDDDGSLEAEVRTNLEAAQKRFEELSILNLLSGEA 123
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
DK G ++I AGAGGT+A DWA ML RMY+RW E+ YK V+ +E GIKS I++
Sbjct: 124 DKNGCFLTIHAGAGGTEACDWAYMLSRMYIRWAERHGYKLETVDLQ-EDEGGIKSTTIQI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
EG Y YG+L GE G HR+VR SPF+A R TSFS + P+L +++++V I EDL +
Sbjct: 183 EGDYVYGHLKGEAGVHRLVRISPFDANARRHTSFSSVFIFPIL-DDTIEVNIRPEDLRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+GGKGGQ+VNK ++AVR TH+PTG+ V+C ERSQ+ N+ ++ L+AKL EEQ
Sbjct: 242 TYRSGGKGGQHVNKTDSAVRFTHLPTGIVVQCDSERSQIMNRQTCMNLLRAKLYAYYEEQ 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
R E + + WG QIR+YVF PY +VKD RT DI +VMDG+++ FI S+L
Sbjct: 302 RQKETAKFGAEKKDISWGNQIRSYVFQPYTMVKDNRTKFSVGDIQAVMDGDIDQFIDSFL 361
Query: 366 KYKY 369
+ ++
Sbjct: 362 QAQW 365
>gi|423405495|ref|ZP_17382644.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-3]
gi|401661111|gb|EJS78581.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-3]
Length = 326
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQSVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|154687644|ref|YP_001422805.1| hypothetical protein RBAM_032440 [Bacillus amyloliquefaciens FZB42]
gi|375363964|ref|YP_005132003.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385266424|ref|ZP_10044511.1| RF-1 domain-containing protein [Bacillus sp. 5B6]
gi|394991070|ref|ZP_10383878.1| hypothetical protein BB65665_01519 [Bacillus sp. 916]
gi|429506822|ref|YP_007188006.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|451345319|ref|YP_007443950.1| peptide chain release factor 2 [Bacillus amyloliquefaciens IT-45]
gi|452857151|ref|YP_007498834.1| Peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|154353495|gb|ABS75574.1| PrfB [Bacillus amyloliquefaciens FZB42]
gi|371569958|emb|CCF06808.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|385150920|gb|EIF14857.1| RF-1 domain-containing protein [Bacillus sp. 5B6]
gi|393808053|gb|EJD69364.1| hypothetical protein BB65665_01519 [Bacillus sp. 916]
gi|429488412|gb|AFZ92336.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|449849077|gb|AGF26069.1| peptide chain release factor 2 [Bacillus amyloliquefaciens IT-45]
gi|452081411|emb|CCP23179.1| Peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 327
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +K+ +N ++ L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKE--EPDQDLQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L K L++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 EKELKSLTKELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
>gi|306829186|ref|ZP_07462376.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
gi|304428272|gb|EFM31362.1| peptide chain release factor RF2 [Streptococcus mitis ATCC 6249]
Length = 325
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFCKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
Length = 367
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 232/366 (63%), Gaps = 11/366 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ D++ S + I A L L ++AELE +AA WD++ +AQ L+ +
Sbjct: 4 DVEADIKDLSATLASIEAVMDLDALRAQVAELEEQAARPDLWDDQEKAQRVTSQLSHKQG 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ +T + ++DD + +L E D D G EA + +L + + E+ LLSG Y
Sbjct: 64 ELRRVTALRGRLDDLGVLYELAE--DEGDEGSAAEADTERAKLREEISSLEVRTLLSGEY 121
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++++ A AGG DA D+A+MLLRMY RW E+ Y V + S EEAGIKSA V
Sbjct: 122 DARDALVTVRAEAGGVDAADFAEMLLRMYSRWAERHNYAVDVFDTSYAEEAGIKSATFRV 181
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ V+I E++L +
Sbjct: 182 TAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVVPVV-EQTDHVEIDEKELRVD 240
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQL NK A++ L+AKLL E Q
Sbjct: 241 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQAKLL---ERQ 297
Query: 306 RASEIKQIRGDAVK---AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
R E Q + DA+K + WG Q+R+YV HPY++VKD+RT HE + +V+DGE++ F++
Sbjct: 298 RQEE--QAKMDALKDSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPSAVLDGEIDDFLE 355
Query: 363 SYLKYK 368
+ ++++
Sbjct: 356 AGIRWR 361
>gi|342218238|ref|ZP_08710860.1| peptide chain release factor 2 [Megasphaera sp. UPII 135-E]
gi|341590673|gb|EGS33909.1| peptide chain release factor 2 [Megasphaera sp. UPII 135-E]
Length = 341
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 212/331 (64%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+L+++ +D FW++ A+ Q T +K+ + + ++ V L ++ +
Sbjct: 2 DLDIRMSDPDFWNDPERARNISQEATALKEAVEAHYSLIRRAEELYDYVSLA--IEEGEI 59
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
LL E + K+L + +++ E+ LLSG YD A+I+ AGAGGT+AQDWA ML+RMY
Sbjct: 60 SLLNELETQYKQLLEEVEKQEIRLLLSGEYDHCNAIITFHAGAGGTEAQDWAQMLIRMYT 119
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E+ Y +++ G+EAG+KSA V G AYGYL EKG HR+VR SPF+A R
Sbjct: 120 RWAERSGYTLVLMDLQPGDEAGVKSATFGVVGDLAYGYLKSEKGVHRLVRISPFDAAARR 179
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
TSF+ +VMP LPE+ +D+QI +D+ + + RA G GGQ+VNK +AVR+THIPTG+ V
Sbjct: 180 HTSFTAVDVMPELPED-VDIQINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVV 238
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
+C ERSQL NK L L+AKL + +E++A +I G EWG QIR+YVFHPY
Sbjct: 239 QCQNERSQLQNKEMCLKYLRAKLFELEQEKQAQLKAEIGGVHQAIEWGSQIRSYVFHPYN 298
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
LVKD RT ET ++ +VMDG+L+ FI+ YL+
Sbjct: 299 LVKDHRTNVETGNVQAVMDGDLDMFIEGYLQ 329
>gi|290890028|ref|ZP_06553113.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
gi|419758654|ref|ZP_14284969.1| peptide chain release factor 2 [Oenococcus oeni AWRIB304]
gi|419856987|ref|ZP_14379701.1| peptide chain release factor 2 [Oenococcus oeni AWRIB202]
gi|419858595|ref|ZP_14381266.1| peptide chain release factor 2 [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|421184410|ref|ZP_15641833.1| peptide chain release factor 2 [Oenococcus oeni AWRIB318]
gi|421188683|ref|ZP_15646019.1| peptide chain release factor 2 [Oenococcus oeni AWRIB419]
gi|421190620|ref|ZP_15647916.1| peptide chain release factor 2 [Oenococcus oeni AWRIB422]
gi|421191411|ref|ZP_15648688.1| peptide chain release factor 2 [Oenococcus oeni AWRIB548]
gi|421193945|ref|ZP_15651185.1| peptide chain release factor 2 [Oenococcus oeni AWRIB553]
gi|421194206|ref|ZP_15651428.1| peptide chain release factor 2 [Oenococcus oeni AWRIB568]
gi|421197136|ref|ZP_15654316.1| peptide chain release factor 2 [Oenococcus oeni AWRIB576]
gi|290480375|gb|EFD89014.1| hypothetical protein AWRIB429_0503 [Oenococcus oeni AWRIB429]
gi|399904682|gb|EJN92135.1| peptide chain release factor 2 [Oenococcus oeni AWRIB304]
gi|399964856|gb|EJN99490.1| peptide chain release factor 2 [Oenococcus oeni AWRIB419]
gi|399967124|gb|EJO01607.1| peptide chain release factor 2 [Oenococcus oeni AWRIB318]
gi|399969390|gb|EJO03730.1| peptide chain release factor 2 [Oenococcus oeni AWRIB422]
gi|399970411|gb|EJO04704.1| peptide chain release factor 2 [Oenococcus oeni AWRIB553]
gi|399972234|gb|EJO06448.1| peptide chain release factor 2 [Oenococcus oeni AWRIB548]
gi|399975650|gb|EJO09686.1| peptide chain release factor 2 [Oenococcus oeni AWRIB576]
gi|399978218|gb|EJO12174.1| peptide chain release factor 2 [Oenococcus oeni AWRIB568]
gi|410498543|gb|EKP89993.1| peptide chain release factor 2 [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|410498646|gb|EKP90094.1| peptide chain release factor 2 [Oenococcus oeni AWRIB202]
Length = 372
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 221/363 (60%), Gaps = 2/363 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++ I G GGT++ DWA L RMY RW + +K V + G+ AGI SA + + G
Sbjct: 125 NNAILEIHPGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIG 184
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYG+L EKG HR VR SPF++ G R TSF +VMP L ++ ++++I +D+++
Sbjct: 185 HNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVY 244
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQNVNKV TAVR+THIPTG+ V ER+Q N+ A+ LKAKL E++R
Sbjct: 245 RSGGAGGQNVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEREEQKRE 304
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
E ++ G + WG QIR+YVF PY++VKD+R+G+ET D VMDG L+PFI +YLK+
Sbjct: 305 EEHAKLSGTKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKW 364
Query: 368 KYS 370
K S
Sbjct: 365 KLS 367
>gi|116490620|ref|YP_810164.1| peptide chain release factor 2 [Oenococcus oeni PSU-1]
gi|122277196|sp|Q04GC3.1|RF2_OENOB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116091345|gb|ABJ56499.1| bacterial peptide chain release factor 2 (bRF-2) [Oenococcus oeni
PSU-1]
Length = 372
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 221/363 (60%), Gaps = 2/363 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++ I G GGT++ DWA L RMY RW + +K V + G+ AGI SA + + G
Sbjct: 125 NNAILEIHPGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIG 184
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYG+L EKG HR VR SPF++ G R TSF +VMP L ++ ++++I +D+++
Sbjct: 185 HNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVY 244
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQNVNKV TAVR+THIPTG+ V ER+Q N+ A+ LKAKL E++R
Sbjct: 245 RSGGAGGQNVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKRE 304
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
E ++ G + WG QIR+YVF PY++VKD+R+G+ET D VMDG L+PFI +YLK+
Sbjct: 305 EEHAKLSGTKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKW 364
Query: 368 KYS 370
K S
Sbjct: 365 KLS 367
>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
28L]
gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
28L]
Length = 352
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 219/347 (63%), Gaps = 3/347 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E+ + +L+++ +D FW++ A+ Q T +K+++ ++ D ++L M
Sbjct: 5 EERIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELA--M 62
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
+ D L + + L +++ E+ LLSG YD+ A+++ AGAGGT+AQDW ML
Sbjct: 63 EEKDTSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQML 122
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
+RMY RW E+ Y R+++ G+EAG+KSA V+G YAYGYL EKG HR+VR SPF+
Sbjct: 123 IRMYTRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFD 182
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSF+ +VMP LP++ +DV+I +++ + + RA G GGQ+VNK +AVR+TH+P
Sbjct: 183 AAARRHTSFTAVDVMPELPDD-VDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLP 241
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V+C ERSQL NK L L+AKL + EE++A +I G EWG QIR+YV
Sbjct: 242 TGIVVQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYV 301
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
FHPY LVKD RT ET + +VMDGEL+ FI+ +L+ + + + D
Sbjct: 302 FHPYNLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREKNRKTAGQD 348
>gi|300778963|ref|ZP_07088821.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
35910]
gi|300504473|gb|EFK35613.1| peptide chain release factor RF2 [Chryseobacterium gleum ATCC
35910]
Length = 376
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 218/355 (61%), Gaps = 5/355 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++ R+E++ +++ + E+A + K A FWDN A+ L+ L K +
Sbjct: 13 IKEVQSRIEDLHRYLQIEKKKIEIANDDEKTAAPEFWDNPKTAEAFLKQLRSKKKWVESY 72
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ T+ +D + +E ++ L E +++++ + E +LS D+ A
Sbjct: 73 DEIHTQFEDLQVLADFAKEDPDSEKELDETFPQLVEKI----EDLEFKNMLSNEGDELSA 128
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
V+ ITAGAGGT++ DWA ML+RMY W EKQ YK R + G+ AG+K+ +E+EG YA
Sbjct: 129 VLQITAGAGGTESCDWASMLMRMYTMWAEKQGYKIRELNFQEGDVAGVKTVTLEIEGEYA 188
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
+GYL GE G HR+VR SPF++ R TSF V PL+ ++++++ I D+ RA
Sbjct: 189 FGYLKGENGVHRLVRISPFDSNAKRHTSFVSVYVYPLV-DDTIEININPADISFETMRAS 247
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQNVNKVETAVR+ H PTG+ + +E RSQL NK KA+ L+++L + E+R
Sbjct: 248 GAGGQNVNKVETAVRLRHAPTGIIIENSESRSQLQNKEKAMQLLRSRLYEMELEERMKAR 307
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+I + +K EWG QIRNYV HPYKLVKDVR+GHETSD+ +VM+G + PF+K++L
Sbjct: 308 NEIEANKMKIEWGSQIRNYVMHPYKLVKDVRSGHETSDVDAVMNGNITPFLKAFL 362
>gi|348170778|ref|ZP_08877672.1| putative peptide chain release factor 2 [Saccharopolyspora spinosa
NRRL 18395]
Length = 368
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 226/354 (63%), Gaps = 5/354 (1%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
S+ +E I + L L + ELE +AA WD+ AQ L + ++ +T+ +
Sbjct: 13 SNTLEGIESVMDLAALRANIGELEAEAAKPDLWDDVEHAQRVSSQLVHRQAELRKITELR 72
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+++D + +L+E D D+ L EA L K L+ E+ LLSG YD+ A+++I
Sbjct: 73 QRLEDLEVLYELSE--DEGDSAGLSEADEERDRLKKDLEALEVRTLLSGEYDQREAMVTI 130
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
A AGG DA D+A+ML+RMY+RW E+ Y V + S EEAG+KSA V YAYG L
Sbjct: 131 RAEAGGVDAADFAEMLMRMYLRWAERHSYPAEVYDTSYAEEAGLKSATFRVNAPYAYGTL 190
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
S E+GTHR+VR SPF+ +G RQTSF+G EV+P++ EE+ V IPE+D+ + R+ G GG
Sbjct: 191 SVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EETDHVDIPEKDIRVDVFRSSGPGG 249
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q+VN ++AVRITHIPTG+ V C E+SQL NK A+ L++KLL +E+ +E+ ++
Sbjct: 250 QSVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAAMRVLQSKLLARKKEEERAELDALK 309
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT HE + +V+DG+++ F+++ ++++
Sbjct: 310 DSG--SSWGNQMRSYVLHPYQMVKDLRTEHEVGNPDAVLDGDIDGFLEAGIRWR 361
>gi|49188023|ref|YP_031276.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
gi|49181950|gb|AAT57326.1| peptide chain release factor 2 [Bacillus anthracis str. Sterne]
Length = 326
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|65317159|ref|ZP_00390118.1| COG1186: Protein chain release factor B [Bacillus anthracis str.
A2012]
Length = 325
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNKAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 179 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 237
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 238 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 297
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 298 TNTEVGNVQAVMDGEIDPFIDAYLR 322
>gi|417788605|ref|ZP_12436288.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
gi|334308782|gb|EGL99768.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
Length = 355
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/342 (41%), Positives = 216/342 (63%), Gaps = 2/342 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L LE+++AE E + A+ FWD++ +AQ+ + D+K K + + D ++L
Sbjct: 9 LDALEEKIAENEARMAEPGFWDDQEKAQKVIAENNDLKAKFETFHELAESISDLGVSLEL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E+ D L + + K L ++L LLS YDK A++ I GAGGT++QDW
Sbjct: 69 LQEI-PDDEELQADLEENYQHAEKLLQSYQLNMLLSEKYDKNNAILEIHPGAGGTESQDW 127
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY RW + +K V+ G++AGIKS + +EG+ AYGYL E+G HR+VR
Sbjct: 128 GSMLLRMYTRWASQHDFKVETVDYQPGDDAGIKSVTLMIEGKNAYGYLRSERGVHRLVRI 187
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ VMP L ++S++V++ ED+++ RA G GGQ++NK +AVR+
Sbjct: 188 SPFDSAGRRHTSFASVNVMPEL-DDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRL 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
HIPTG+ V +RSQ N+ A + L+AKL + E++ + I+G+ + WG QI
Sbjct: 247 IHIPTGIVVSSQAQRSQFQNRATAENMLRAKLYQLEMEEKEKQRAAIQGEQLDIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YVFHPY +VKD RT +ET +I +VMDG+L+PFI +YL++K
Sbjct: 307 RSYVFHPYSMVKDHRTDYETGNIQAVMDGDLDPFINAYLQWK 348
>gi|75759027|ref|ZP_00739135.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228903659|ref|ZP_04067779.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
gi|228911012|ref|ZP_04074820.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
gi|228968278|ref|ZP_04129276.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|423362983|ref|ZP_17340483.1| peptide chain release factor 2 [Bacillus cereus VD022]
gi|423565945|ref|ZP_17542220.1| peptide chain release factor 2 [Bacillus cereus MSX-A1]
gi|74493493|gb|EAO56601.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|228791451|gb|EEM39055.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228848667|gb|EEM93513.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 200]
gi|228855927|gb|EEN00467.1| Peptide chain release factor 2 [Bacillus thuringiensis IBL 4222]
gi|401076734|gb|EJP85085.1| peptide chain release factor 2 [Bacillus cereus VD022]
gi|401192737|gb|EJQ99747.1| peptide chain release factor 2 [Bacillus cereus MSX-A1]
Length = 326
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGSFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|423613301|ref|ZP_17589161.1| peptide chain release factor 2 [Bacillus cereus VD107]
gi|401242463|gb|EJR48838.1| peptide chain release factor 2 [Bacillus cereus VD107]
Length = 326
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQTVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ++N ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|423451567|ref|ZP_17428420.1| peptide chain release factor 2 [Bacillus cereus BAG5X1-1]
gi|423471334|ref|ZP_17448078.1| peptide chain release factor 2 [Bacillus cereus BAG6O-2]
gi|423520979|ref|ZP_17497452.1| peptide chain release factor 2 [Bacillus cereus HuA4-10]
gi|423557296|ref|ZP_17533599.1| peptide chain release factor 2 [Bacillus cereus MC67]
gi|401145275|gb|EJQ52801.1| peptide chain release factor 2 [Bacillus cereus BAG5X1-1]
gi|401180076|gb|EJQ87239.1| peptide chain release factor 2 [Bacillus cereus HuA4-10]
gi|401193104|gb|EJR00111.1| peptide chain release factor 2 [Bacillus cereus MC67]
gi|402432814|gb|EJV64870.1| peptide chain release factor 2 [Bacillus cereus BAG6O-2]
Length = 326
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 209/325 (64%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD + ++D+ +++T ++ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKDMVGRFR----QLDETFENLEMTHDLLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKTLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH+PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE+ PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEINPFIDAYLR 323
>gi|402311418|ref|ZP_10830363.1| peptide chain release factor 2 [Lachnospiraceae bacterium ICM7]
gi|400372700|gb|EJP25640.1| peptide chain release factor 2 [Lachnospiraceae bacterium ICM7]
Length = 337
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/336 (41%), Positives = 210/336 (62%), Gaps = 4/336 (1%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAA 102
+ +FWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E
Sbjct: 3 EPTFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIE 60
Query: 103 SIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQR 162
+++ K +D+ ++ LL+G YD A++ + AGAGGT++ DW ML RMY RW +
Sbjct: 61 GMLEAFTKEIDELKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSMLYRMYTRWAAAEG 120
Query: 163 YKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGA 222
Y +++ G+EAGIKS +++ G AYGYL E G HR+VR SPFNA G RQTSF
Sbjct: 121 YSVEILDMLEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180
Query: 223 EVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERS 282
++MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V+C ERS
Sbjct: 181 DIMPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERS 239
Query: 283 QLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRT 342
Q NK +A+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY +VKD RT
Sbjct: 240 QFQNKDRAMQMLKAKLFMLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHRT 299
Query: 343 GHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASDA 378
G E+ ++ +VMDG+++ FI +YL ++ S+ A +A
Sbjct: 300 GAESGNVSAVMDGDIDKFIIAYLTWQ-SLGCPARNA 334
>gi|312862769|ref|ZP_07723009.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
gi|311101629|gb|EFQ59832.1| peptide chain release factor 2 [Streptococcus vestibularis F0396]
Length = 337
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 225/339 (66%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++A LE + + FW++ AQ+T Q L ++K K + + D+ +++ EE
Sbjct: 1 MEEDIALLENRMTEPDFWNDNIAAQKTSQELNELKMKYETFNNMQELSDETELYLEMLEE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS + EE +++L+K + +E+T LLS PYD A++ I G+GGT+AQDWADM
Sbjct: 61 DDS----IQEELEETLEKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF
Sbjct: 117 LLRMYQRYGNAKGFKVETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RTG+E + + VMDG++E FI + LK++
Sbjct: 296 VFTPYTMVKDHRTGYEVAQVDKVMDGDIEGFIDACLKWR 334
>gi|406983802|gb|EKE04960.1| peptide chain release factor 2 [uncultured bacterium]
Length = 350
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 214/329 (65%), Gaps = 17/329 (5%)
Query: 41 AADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEE 100
+ D WD++ +A+ LQ L+ +K +++ + D + D + I+ E+++
Sbjct: 38 STDPKLWDDQNKAKAVLQNLSGLKAELDEIKD----VSDTLEILNEVEDVEE-------- 85
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
+ +L + + + EL LS +D + +I+I AG GGT+A DWA ML RMY+R+ E+
Sbjct: 86 ----LNKLGRLIAKLELKSYLSATHDSKNTIITIHAGQGGTEAMDWAQMLFRMYIRYCER 141
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ + T ++ + GEEAG+K+ E++GRYAYGYL GE GTHR+VRQSPFNA LRQTSF+
Sbjct: 142 KGFATETIDSTSGEEAGLKTVTFEIKGRYAYGYLKGEAGTHRLVRQSPFNANDLRQTSFA 201
Query: 221 GAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
EV+P L + D+QI +E+L+ F+RAGG GGQNVNKV TAVR+TH+PTG+ +
Sbjct: 202 LVEVLPDLEASDLPDIQIKDEELDWQFTRAGGHGGQNVNKVSTAVRLTHLPTGIVITART 261
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ER Q N+ AL L+AKL + +E + +K I+G+ A WG QIR+YV HPYK+VKD
Sbjct: 262 ERFQEQNRKIALGLLRAKLWIRQQEMEKNNLKDIKGEYKPASWGNQIRSYVLHPYKMVKD 321
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+RT E+ + V+DGEL+ FI++ LK K
Sbjct: 322 LRTEVESGNPDRVLDGELDEFIEAELKLK 350
>gi|423394627|ref|ZP_17371828.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-1]
gi|401657409|gb|EJS74919.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-1]
Length = 326
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQSVINEANALKD---MVGKFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|312867359|ref|ZP_07727568.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
gi|337282337|ref|YP_004621808.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
15912]
gi|387879918|ref|YP_006310221.1| peptide chain release factor 2 [Streptococcus parasanguinis FW213]
gi|417917858|ref|ZP_12561416.1| peptide chain release factor 2 [Streptococcus parasanguinis SK236]
gi|419801026|ref|ZP_14326274.1| peptide chain release factor 2 [Streptococcus parasanguinis F0449]
gi|311097060|gb|EFQ55295.1| peptide chain release factor 2 [Streptococcus parasanguinis F0405]
gi|335369930|gb|AEH55880.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
15912]
gi|342829769|gb|EGU64114.1| peptide chain release factor 2 [Streptococcus parasanguinis SK236]
gi|385693050|gb|EIG23709.1| peptide chain release factor 2 [Streptococcus parasanguinis F0449]
gi|386793368|gb|AFJ26403.1| peptide chain release factor 2 [Streptococcus parasanguinis FW213]
Length = 336
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 221/339 (65%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE K + FWD+ AQ+T Q L ++K D++ ++ E
Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS + EE ++EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DM
Sbjct: 61 DDS----VKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG +AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT +E + + VMDG+++ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334
>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
Length = 368
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 236/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLGVLFEMAEEEDDPDT--RAEAESELTAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT V E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SP++ +G RQTSF+G E++P++ E++ V+I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPYDNQGRRQTSFAGVEILPVV-EQTDHVEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTDFEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
Length = 368
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 237/367 (64%), Gaps = 12/367 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WDN EAQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAVPSLWDNPDEAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLGVLFEMAEEEDDPDT--RAEAESELASVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT + E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQKGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLL-----D 296
Query: 306 RASEIKQIRGDAVKAE----WGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
R + +Q R DA+K + WG Q+R+YV HPY++VKD+RT +E + +V +GE+E F+
Sbjct: 297 RRRQEEQARMDALKGDGGNSWGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFL 356
Query: 362 KSYLKYK 368
++ ++++
Sbjct: 357 EAGIRWR 363
>gi|148985895|ref|ZP_01818989.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
gi|148989834|ref|ZP_01821128.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
gi|149007634|ref|ZP_01831251.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
gi|149020396|ref|ZP_01835288.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
gi|387757183|ref|YP_006064162.1| peptide chain release factor 2 [Streptococcus pneumoniae OXC141]
gi|405760923|ref|YP_006701519.1| peptide chain release factor 2 [Streptococcus pneumoniae SPNA45]
gi|417676506|ref|ZP_12325919.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
gi|417695912|ref|ZP_12345092.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
gi|418074094|ref|ZP_12711350.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11184]
gi|418078245|ref|ZP_12715468.1| peptide chain release factor 2 [Streptococcus pneumoniae 4027-06]
gi|418080197|ref|ZP_12717412.1| peptide chain release factor 2 [Streptococcus pneumoniae 6735-05]
gi|418086493|ref|ZP_12723664.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47033]
gi|418089146|ref|ZP_12726304.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43265]
gi|418091369|ref|ZP_12728514.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44452]
gi|418095857|ref|ZP_12732972.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16531]
gi|418098120|ref|ZP_12735220.1| peptide chain release factor 2 [Streptococcus pneumoniae 6901-05]
gi|418107134|ref|ZP_12744174.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41410]
gi|418109716|ref|ZP_12746745.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49447]
gi|418114240|ref|ZP_12751231.1| peptide chain release factor 2 [Streptococcus pneumoniae 5787-06]
gi|418116478|ref|ZP_12753452.1| peptide chain release factor 2 [Streptococcus pneumoniae 6963-05]
gi|418125360|ref|ZP_12762276.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44511]
gi|418132596|ref|ZP_12769469.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11304]
gi|418134486|ref|ZP_12771344.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11426]
gi|418139069|ref|ZP_12775900.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13338]
gi|418145976|ref|ZP_12782760.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13637]
gi|418154787|ref|ZP_12791518.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16242]
gi|418159397|ref|ZP_12796099.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17227]
gi|418161791|ref|ZP_12798482.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17328]
gi|418168847|ref|ZP_12805493.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19077]
gi|418173115|ref|ZP_12809729.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41277]
gi|418180111|ref|ZP_12816683.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41688]
gi|418182350|ref|ZP_12818911.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43380]
gi|418191303|ref|ZP_12827807.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47388]
gi|418202031|ref|ZP_12838461.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52306]
gi|418213925|ref|ZP_12840660.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54644]
gi|418216203|ref|ZP_12842927.1| peptide chain release factor 2 [Streptococcus pneumoniae
Netherlands15B-37]
gi|418218494|ref|ZP_12845162.1| peptide chain release factor 2 [Streptococcus pneumoniae NP127]
gi|418220676|ref|ZP_12847332.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47751]
gi|418225179|ref|ZP_12851808.1| peptide chain release factor 2 [Streptococcus pneumoniae NP112]
gi|418231822|ref|ZP_12858410.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07228]
gi|418236121|ref|ZP_12862690.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19690]
gi|418238326|ref|ZP_12864882.1| peptide chain release factor 2 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|419422635|ref|ZP_13962854.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43264]
gi|419431153|ref|ZP_13971299.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP05]
gi|419433412|ref|ZP_13973531.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40183]
gi|419439964|ref|ZP_13980018.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40410]
gi|419455160|ref|ZP_13995120.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP04]
gi|419457127|ref|ZP_13997073.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02254]
gi|419459600|ref|ZP_13999536.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02270]
gi|419461880|ref|ZP_14001796.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02714]
gi|419464125|ref|ZP_14004018.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04175]
gi|419466724|ref|ZP_14006607.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05248]
gi|419468626|ref|ZP_14008497.1| peptide chain release factor 2 [Streptococcus pneumoniae GA06083]
gi|419479591|ref|ZP_14019399.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19101]
gi|419484380|ref|ZP_14024156.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43257]
gi|419488227|ref|ZP_14027980.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44386]
gi|419496935|ref|ZP_14036646.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47522]
gi|419499284|ref|ZP_14038983.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47597]
gi|419512151|ref|ZP_14051785.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05578]
gi|419516435|ref|ZP_14056053.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02506]
gi|419525498|ref|ZP_14065063.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14373]
gi|419534195|ref|ZP_14073701.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17457]
gi|421240319|ref|ZP_15696867.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080913]
gi|421272397|ref|ZP_15723244.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR55]
gi|421280736|ref|ZP_15731535.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04672]
gi|421282942|ref|ZP_15733731.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04216]
gi|421285414|ref|ZP_15736191.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60190]
gi|421297360|ref|ZP_15748063.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58581]
gi|421300608|ref|ZP_15751279.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19998]
gi|421306939|ref|ZP_15757585.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60132]
gi|421309183|ref|ZP_15759812.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62681]
gi|147760789|gb|EDK67760.1| peptide chain release factor 2 [Streptococcus pneumoniae SP18-BS74]
gi|147922041|gb|EDK73165.1| peptide chain release factor 2 [Streptococcus pneumoniae SP3-BS71]
gi|147924776|gb|EDK75860.1| peptide chain release factor 2 [Streptococcus pneumoniae SP6-BS73]
gi|147930698|gb|EDK81680.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
gi|332077171|gb|EGI87633.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17545]
gi|332203909|gb|EGJ17976.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47368]
gi|353747436|gb|EHD28092.1| peptide chain release factor 2 [Streptococcus pneumoniae 4027-06]
gi|353749594|gb|EHD30238.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11184]
gi|353753808|gb|EHD34424.1| peptide chain release factor 2 [Streptococcus pneumoniae 6735-05]
gi|353759756|gb|EHD40339.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47033]
gi|353762833|gb|EHD43391.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43265]
gi|353766742|gb|EHD47282.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44452]
gi|353770485|gb|EHD50998.1| peptide chain release factor 2 [Streptococcus pneumoniae 6901-05]
gi|353770844|gb|EHD51355.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16531]
gi|353780611|gb|EHD61068.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41410]
gi|353785009|gb|EHD65429.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49447]
gi|353787538|gb|EHD67940.1| peptide chain release factor 2 [Streptococcus pneumoniae 5787-06]
gi|353790316|gb|EHD70699.1| peptide chain release factor 2 [Streptococcus pneumoniae 6963-05]
gi|353799404|gb|EHD79723.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44511]
gi|353806552|gb|EHD86825.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11304]
gi|353815544|gb|EHD95760.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13637]
gi|353823079|gb|EHE03254.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16242]
gi|353824749|gb|EHE04917.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17227]
gi|353831381|gb|EHE11510.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17328]
gi|353836766|gb|EHE16854.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19077]
gi|353839814|gb|EHE19888.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41277]
gi|353846077|gb|EHE26112.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41688]
gi|353850587|gb|EHE30591.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43380]
gi|353857204|gb|EHE37167.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47388]
gi|353867834|gb|EHE47724.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52306]
gi|353871208|gb|EHE51079.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54644]
gi|353873254|gb|EHE53115.1| peptide chain release factor 2 [Streptococcus pneumoniae
Netherlands15B-37]
gi|353876691|gb|EHE56540.1| peptide chain release factor 2 [Streptococcus pneumoniae NP127]
gi|353877545|gb|EHE57388.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47751]
gi|353882487|gb|EHE62298.1| peptide chain release factor 2 [Streptococcus pneumoniae NP112]
gi|353888128|gb|EHE67904.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07228]
gi|353894050|gb|EHE73795.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19690]
gi|353894749|gb|EHE74490.1| peptide chain release factor 2 [Streptococcus pneumoniae
NorthCarolina6A-23]
gi|353903076|gb|EHE78602.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11426]
gi|353905906|gb|EHE81322.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13338]
gi|379532613|gb|EHY97838.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02254]
gi|379534472|gb|EHY99684.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02270]
gi|379534771|gb|EHY99981.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02714]
gi|379539344|gb|EHZ04523.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04175]
gi|379544847|gb|EHZ09991.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05248]
gi|379546729|gb|EHZ11867.1| peptide chain release factor 2 [Streptococcus pneumoniae GA06083]
gi|379559889|gb|EHZ24916.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14373]
gi|379567239|gb|EHZ32225.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17457]
gi|379573245|gb|EHZ38201.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19101]
gi|379577542|gb|EHZ42461.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40183]
gi|379580575|gb|EHZ45465.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40410]
gi|379583891|gb|EHZ48768.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43257]
gi|379589966|gb|EHZ54805.1| peptide chain release factor 2 [Streptococcus pneumoniae GA43264]
gi|379590342|gb|EHZ55180.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44386]
gi|379601449|gb|EHZ66222.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47522]
gi|379602338|gb|EHZ67109.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47597]
gi|379629617|gb|EHZ94211.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP04]
gi|379632397|gb|EHZ96973.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP05]
gi|379636621|gb|EIA01179.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05578]
gi|379640438|gb|EIA04977.1| peptide chain release factor 2 [Streptococcus pneumoniae GA02506]
gi|395609256|gb|EJG69344.1| peptide chain release factor 2 [Streptococcus pneumoniae 2080913]
gi|395877956|gb|EJG89025.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR55]
gi|395882808|gb|EJG93852.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04216]
gi|395884093|gb|EJG95135.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04672]
gi|395887393|gb|EJG98408.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60190]
gi|395892934|gb|EJH03924.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58581]
gi|395900032|gb|EJH10971.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19998]
gi|395908902|gb|EJH19779.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60132]
gi|395911927|gb|EJH22791.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62681]
gi|404277812|emb|CCM08367.1| peptide chain release factor 2 [Streptococcus pneumoniae SPNA45]
Length = 325
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|365162870|ref|ZP_09358994.1| peptide chain release factor 2 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363617598|gb|EHL68985.1| peptide chain release factor 2 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 326
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 211/325 (64%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQAVINEANALKD---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQVELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|312865919|ref|ZP_07726140.1| peptide chain release factor 2 [Streptococcus downei F0415]
gi|311098323|gb|EFQ56546.1| peptide chain release factor 2 [Streptococcus downei F0415]
Length = 326
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 217/323 (67%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K + + +++ +++ EE D++ G LEE +
Sbjct: 6 FWDDNITAQKTSQELNELKQTYDTFNQMEELSEESELYLEMLEE-DASVQGDLEET---L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AKLDKMMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYQRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG +AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSIEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I ++DL++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVEIRDDDLKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RTG+E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDG+++ FI +YLK++
Sbjct: 301 VAQVDKVMDGDIDGFIDAYLKWR 323
>gi|419814432|ref|ZP_14339220.1| peptide chain release factor 2 [Streptococcus sp. GMD2S]
gi|419817362|ref|ZP_14341526.1| peptide chain release factor 2 [Streptococcus sp. GMD4S]
gi|404466086|gb|EKA11445.1| peptide chain release factor 2 [Streptococcus sp. GMD4S]
gi|404471827|gb|EKA16298.1| peptide chain release factor 2 [Streptococcus sp. GMD2S]
Length = 325
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQTGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|392530220|ref|ZP_10277357.1| peptide chain release factor 2 [Carnobacterium maltaromaticum ATCC
35586]
Length = 330
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/330 (45%), Positives = 213/330 (64%), Gaps = 9/330 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINL---LTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
+ FWD+ +AQ + +K+K N L + K ++D + +VK E+ +
Sbjct: 2 GEPGFWDDGIKAQNVINEANIIKEKYNQFQQLAETKEELDLLLEMVKEEEDAELE----- 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
+E + LDQFEL LLS PYDK A+I + GAGGT++QDW MLLRMY RW
Sbjct: 57 KELEENLTTFLAVLDQFELDMLLSEPYDKNNAIIELHPGAGGTESQDWGSMLLRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TS
Sbjct: 117 EKKGFKVEYLDYQDGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSAGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +V+P + E+++D+QI +DL I RA G GGQ++NK ++AVRITH+PTGV V
Sbjct: 177 FVSIDVIPEM-EDNVDIQINTDDLRIDTYRASGAGGQHINKTDSAVRITHLPTGVVVASQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
+RSQ+ NK +A+ LKAKL + E++ ++ +IRG+ + WG QIR+YVFHPY ++K
Sbjct: 236 AQRSQMKNKDQAMGMLKAKLYQLELEEKEKQMAEIRGEQKEIGWGSQIRSYVFHPYSMIK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
D RT +ET ++ VMDG+L+PFI +YLK K
Sbjct: 296 DHRTNYETGNVQGVMDGDLDPFIDAYLKSK 325
>gi|171910508|ref|ZP_02925978.1| peptide chain release factor 2 [Verrucomicrobium spinosum DSM 4136]
Length = 359
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/338 (42%), Positives = 224/338 (66%), Gaps = 3/338 (0%)
Query: 29 QLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTE 88
+L+ +L LE + A FWDN+ A++T+ + ++K++I L + + +++D + ++ +
Sbjct: 12 KLKSDLETLEDELARPEFWDNQERARKTIDTVNNLKNRILPLEELERRLEDFFVLGEIAQ 71
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
D E + KAL FEL LL+G DK+GA ++I GAGGT++ DWAD
Sbjct: 72 H--ENDLASWTEVEKEYHAMEKALSDFELAMLLTGELDKKGAFVTIHCGAGGTESCDWAD 129
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
MLLRMY RW E+ YKT +V+ + GEE G++SAV V G YA+G L+ E+G HR+VR SP
Sbjct: 130 MLLRMYQRWCERSGYKTEMVDFAPGEEVGVRSAVFRVTGDYAFGKLNCERGVHRLVRISP 189
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
F++ R TSF+ +V P + +E + +++ E D++ R+GGKGGQNVNKVETAVR+ H
Sbjct: 190 FDSAKRRHTSFASVDVTPEV-DEDIGIELNEADIKFETYRSGGKGGQNVNKVETAVRLIH 248
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
PTG+ V C +RSQ N+ A++ LKAKL + ++++ +E+++ G+ WG QIR+
Sbjct: 249 EPTGIIVNCQVQRSQGKNREMAMNMLKAKLYQLEQDKKKTEMERQYGEKGDVAWGSQIRS 308
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
YVF PY++VKD RTG +T ++ +VMDG+L+ FI++ L+
Sbjct: 309 YVFQPYQMVKDHRTGEKTGNVGNVMDGDLDAFIEAKLR 346
>gi|338730825|ref|YP_004660217.1| peptide chain release factor 2 (bRF-2) [Thermotoga thermarum DSM
5069]
gi|335365176|gb|AEH51121.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
thermarum DSM 5069]
Length = 367
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 229/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y + +E + + ++ ++L+ E+ ++E K A W+++ A E + L K
Sbjct: 4 YETKVKIEELKTKAKNLKQLVEPEKLQMEIQQMESKLASPDIWNDQKSASEIGKKLRRAK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
LL D TK+D + +++ E+ D +++ + L K + QF+L +L+ P
Sbjct: 64 ---KLLEDV-TKIDRILEEIEIGLELSDEDPEFVQDVERRVTNLEKIVKQFQLDLILNDP 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
D+ A +S+ GAGGT++ DWA MLLRMY+RW EK+ ++ +V+ GEEAG+KSA +
Sbjct: 120 MDQNNAYLSVHPGAGGTESHDWAQMLLRMYMRWAEKKGFEVELVDFQPGEEAGVKSATLL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E+G HR+VR SPF+A G R TSF+ V+P L ++ ++++I EDL+I
Sbjct: 180 IKGEYAYGYLKHERGVHRLVRISPFDAAGRRHTSFASVNVIPELSDD-IEIEIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK ++AVRITHIPTG+ V C ERSQ NK +AL LKA+L +
Sbjct: 239 ETFRASGHGGQYVNKTDSAVRITHIPTGIVVSCQSERSQHQNKAQALKMLKARLYQLEML 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+R +I++++G+ + WG QIR+Y+ HPYKLVKD RT ET D +V+DGE++ FI++
Sbjct: 299 KRKEKIEELQGELKEIAWGNQIRSYILHPYKLVKDHRTEVETGDAEAVLDGEIDLFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LFY 361
>gi|154483104|ref|ZP_02025552.1| hypothetical protein EUBVEN_00805 [Eubacterium ventriosum ATCC
27560]
gi|149735912|gb|EDM51798.1| peptide chain release factor 2 [Eubacterium ventriosum ATCC 27560]
Length = 286
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/278 (51%), Positives = 189/278 (67%), Gaps = 7/278 (2%)
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQ---LLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DA ++EE KE +D+FE T+ LLSG YDK A++ I AGAGGT++ DWA M
Sbjct: 6 NDASIVEEVEQETKEF---IDEFEKTKIETLLSGEYDKNNAIVKINAGAGGTESCDWASM 62
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMY RW E + YKT V++ G+EAGIKS +V G AYGYL EKG HR+VR SPF
Sbjct: 63 LYRMYTRWAESKGYKTEVLDFLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPF 122
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
NA G RQTSF+ +VMP + EE +DV+I ++D+ I R+ G GGQ++NK +AVRITH
Sbjct: 123 NAAGKRQTSFASCDVMPDI-EEDLDVEINDDDIRIDTYRSSGAGGQHINKTSSAVRITHN 181
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V+C ERSQL NK KA+ LKAKL V+ +++ + IRG+ + WG QIR+Y
Sbjct: 182 PTGIVVQCQNERSQLQNKDKAMKMLKAKLYVLKKQEEEEKRSGIRGEIKEIGWGSQIRSY 241
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
V PY +VKD RT E +D+ VMDG ++PFI +YLK+
Sbjct: 242 VMQPYTMVKDHRTNQEITDVGKVMDGYIDPFINAYLKW 279
>gi|449971585|ref|ZP_21814442.1| peptide chain release factor 2 [Streptococcus mutans 2VS1]
gi|450031536|ref|ZP_21833730.1| peptide chain release factor 2 [Streptococcus mutans G123]
gi|450059730|ref|ZP_21843510.1| peptide chain release factor 2 [Streptococcus mutans NLML4]
gi|450093077|ref|ZP_21856439.1| peptide chain release factor 2 [Streptococcus mutans W6]
gi|450150398|ref|ZP_21876569.1| peptide chain release factor 2 [Streptococcus mutans 14D]
gi|450163879|ref|ZP_21880979.1| peptide chain release factor 2 [Streptococcus mutans B]
gi|449171879|gb|EMB74524.1| peptide chain release factor 2 [Streptococcus mutans 2VS1]
gi|449191553|gb|EMB93030.1| peptide chain release factor 2 [Streptococcus mutans G123]
gi|449202789|gb|EMC03679.1| peptide chain release factor 2 [Streptococcus mutans NLML4]
gi|449217522|gb|EMC17569.1| peptide chain release factor 2 [Streptococcus mutans W6]
gi|449233666|gb|EMC32728.1| peptide chain release factor 2 [Streptococcus mutans 14D]
gi|449242506|gb|EMC41088.1| peptide chain release factor 2 [Streptococcus mutans B]
Length = 325
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 214/323 (66%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNVAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG+ AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|331266735|ref|YP_004326365.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
gi|326683407|emb|CBZ01025.1| peptide chain release factor 2 [Streptococcus oralis Uo5]
Length = 325
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
Length = 331
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 211/328 (64%), Gaps = 5/328 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ +AQ + + VK ++ + DDAV +++L +E D L
Sbjct: 1 MAAPD--FWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADE--EGDDSLA 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E IK+L +++FEL LL+ PYDK A++ + GAGGT++QDW ML RMY RW
Sbjct: 57 GEIGETIKDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TS
Sbjct: 117 EKRGFKVETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +V+P + ++ +++ I EDL+I RA G GGQ++N ++AVRITH+PTGV V C
Sbjct: 177 FVSCDVVPEITDD-VEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A++ L++KL E++ E+ +IRG+ WG QIR+YVFHPY +VK
Sbjct: 236 NERSQIKNRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RT ET ++ +VMDG+L+ FI YL+
Sbjct: 296 DHRTQVETGNVGAVMDGDLDGFIDGYLR 323
>gi|421730073|ref|ZP_16169202.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|407076039|gb|EKE49023.1| peptide chain release factor 2 [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 327
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 208/329 (63%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FW+++ +AQ + +K+ +N ++ L +E D L +E
Sbjct: 2 AEPEFWNDQQKAQTVINEANGLKEYVNSYHQLSESHEELQMTHDLLKE--EPDQDLQQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+K L + L++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E++
Sbjct: 60 EKELKSLTRELNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAERR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C ER
Sbjct: 180 CEVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ +A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNRDRAMKMLKAKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDG+++ FI +YL+ K S
Sbjct: 299 TNTEMGNVQAVMDGDIDIFIDAYLRSKLS 327
>gi|311070034|ref|YP_003974957.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
gi|419821592|ref|ZP_14345185.1| peptide chain release factor 2 [Bacillus atrophaeus C89]
gi|310870551|gb|ADP34026.1| peptide chain release factor 2 [Bacillus atrophaeus 1942]
gi|388474228|gb|EIM10958.1| peptide chain release factor 2 [Bacillus atrophaeus C89]
Length = 327
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 214/331 (64%), Gaps = 7/331 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
AD FW+++ +AQ + +KD +N +K K+ ++ +++T ++ + D L
Sbjct: 2 ADPEFWNDQQKAQTVINEANGLKDYVN---SYK-KLSESHEELQMTHDLLKEEPDEELQL 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E +K L K ++FEL LLS PYDK A++ + GAGGT++QDW MLLRMY RW E
Sbjct: 58 ELVKELKTLTKEFNEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
++ +K ++ G+EAGIKS + ++G AYGY+ EKG HR+VR SPF++ G R TSF
Sbjct: 118 RRGFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYIKAEKGVHRLVRISPFDSSGRRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
+VMP EE +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT V V C
Sbjct: 178 VSCDVMPEFNEE-IDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNVVVTCQT 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +A+ LK+KL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD
Sbjct: 237 ERSQIKNRDRAMKMLKSKLYQRRIEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT E ++ +VMDG+++ FI +YL+ K S
Sbjct: 297 HRTNTEMGNVQAVMDGDIDVFIDAYLRSKLS 327
>gi|183603122|ref|ZP_02712622.2| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
gi|183573173|gb|EDT93701.1| peptide chain release factor 2 [Streptococcus pneumoniae SP195]
Length = 329
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 217/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+ Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT +E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSYEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|118586958|ref|ZP_01544390.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
gi|118432580|gb|EAV39314.1| peptide chain release factor 2 [Oenococcus oeni ATCC BAA-1163]
Length = 378
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 221/363 (60%), Gaps = 2/363 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 13 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 72
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 73 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 130
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++ I G GGT++ DWA L RMY RW + +K V + G+ AGI SA + + G
Sbjct: 131 NNAILEIHPGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIG 190
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYG+L EKG HR VR SPF++ G R TSF +VMP L ++ ++++I +D+++
Sbjct: 191 HNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVY 250
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQNVNKV TAVR+THIPTG+ V ER+Q N+ A+ LKAKL E++R
Sbjct: 251 RSGGAGGQNVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKRE 310
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
E ++ G + WG QIR+YVF PY++VKD+R+G+ET D VMDG L+PFI +YLK+
Sbjct: 311 EEHAKLSGTKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKW 370
Query: 368 KYS 370
K S
Sbjct: 371 KLS 373
>gi|406906745|gb|EKD47811.1| hypothetical protein ACD_65C00278G0002 [uncultured bacterium]
Length = 364
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 230/355 (64%), Gaps = 6/355 (1%)
Query: 18 VEEIRASAGL---QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
++E+ ++ G QL++ L E +++ FWD+ A++ + ++ + F+
Sbjct: 11 IKEVSSAQGFLEFPQLKERLHEHDLEMNSKGFWDDATHAKKISEEAGRIRKILEQWEGFQ 70
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+++D + + ++T+ + TD E +E K LD+ + L G YD A++SI
Sbjct: 71 KEIEDTLELAEITDPV--TDHKTFRELEKSAEEFQKKLDKLSIQLYLGGRYDNSDAIVSI 128
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
+G GG DAQDWA+MLLRMY+R+ EK+ ++ +VEK+ EEAGIKSA I V+G +AYG L
Sbjct: 129 HSGTGGVDAQDWAEMLLRMYLRYAEKKEWQVELVEKTAAEEAGIKSAEISVKGPFAYGML 188
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
E G HR+VR SPFN+ G R+TSF+ EV P++ E+ DV+I E DLEI R+GG GG
Sbjct: 189 KEEHGVHRLVRMSPFNSGGTRETSFALVEVTPII-HETDDVEINESDLEIDTFRSGGAGG 247
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q+VNK ++AVR+TH PTG+ V+C ERSQL NK A+ LK+KL+ + E+ EI ++
Sbjct: 248 QHVNKTDSAVRLTHKPTGLVVKCQNERSQLQNKQTAMRILKSKLIALREKHDLKEISDLK 307
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 369
G+ V+ WG QIR+YV HPYK+VKD RT +ETS + V+DG+L+ FI++ L+ +
Sbjct: 308 GEHVQHSWGNQIRSYVLHPYKMVKDHRTDYETSQVDDVLDGDLDDFIEASLRQSH 362
>gi|406947899|gb|EKD78745.1| hypothetical protein ACD_41C00281G0010 [uncultured bacterium]
Length = 365
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/350 (43%), Positives = 216/350 (61%), Gaps = 3/350 (0%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R+ I + + ++A LE + + FW N + AQ+ + + D++ +I + +
Sbjct: 7 RITTIGEQLNIAGMRAKVAALEAEMSQPDFWQNPSHAQQVGRVVNDLRKEIATWEQVQQQ 66
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
+ +L E+ D L +E K+L + + E L YD AV++I A
Sbjct: 67 ATSLQEMAQLNEQ--ERDPDLTKELEQQQKKLERQFAELEFHLLFGKKYDDASAVLAIHA 124
Query: 137 GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSG 196
GAGG DAQDWA+ML+RM +R+ E++ + V++ S G EAGIKS +EV GRYAYGYL
Sbjct: 125 GAGGVDAQDWAEMLMRMVMRYCERKGFTVTVLDLSRGNEAGIKSVTMEVIGRYAYGYLKS 184
Query: 197 EKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQN 256
E G HR+VRQSPFNA LRQTSF+ EV+P L E S V+I +ED+ I R+GGKGGQ
Sbjct: 185 EHGVHRLVRQSPFNADALRQTSFALIEVLPELGELS-PVEIKDEDIRIDVYRSGGKGGQG 243
Query: 257 VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 316
VN ++AVRITH+ T + V C ERSQ NK A+ L+AKL + E +E ++RG+
Sbjct: 244 VNTTDSAVRITHLSTNIVVTCQNERSQHQNKATAMKILRAKLHQLQLEAEQAEKLKLRGE 303
Query: 317 AVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
AEWG QIR+YV HPYK+VKD RT +E SD SV++GEL+ F+++YL+
Sbjct: 304 YTSAEWGNQIRSYVLHPYKMVKDHRTEYEVSDPDSVLNGELDGFVEAYLR 353
>gi|407647998|ref|YP_006811757.1| peptide chain release factor 2 [Nocardia brasiliensis ATCC 700358]
gi|407310882|gb|AFU04783.1| peptide chain release factor 2 [Nocardia brasiliensis ATCC 700358]
Length = 371
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 230/348 (66%), Gaps = 13/348 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+++L + + ELE +AAD W+++ AQ+ L+ + ++ + + + ++DD + +L
Sbjct: 25 IEELRRRIDELEHQAADPDLWNDQDHAQQVTSELSHAQGELRRVEELRQRLDDLPVLYEL 84
Query: 87 TE--EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
E E DS A L + A L+ ++ E+ LLSG YDK A+++I +GAGG DA
Sbjct: 85 AEGEEGDSRTAALADADAERAA-LHGDVEAMEVRTLLSGEYDKRDALVNIRSGAGGVDAA 143
Query: 145 DWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIV 204
DWA+ML+RMY+RW ++ +Y V + S EEAGIKSA V+ YAYG LS E GTHR+V
Sbjct: 144 DWAEMLMRMYIRWADRHKYSVEVYDTSYAEEAGIKSATFAVKTPYAYGTLSVEMGTHRLV 203
Query: 205 RQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAV 264
R SPF+ +G RQTSF+ EV+P++ E + ++IPE ++ + R+ G GGQ+VN ++AV
Sbjct: 204 RISPFDNQGRRQTSFAEVEVLPVV-ETTDHIEIPEGEVRVDVYRSSGPGGQSVNTTDSAV 262
Query: 265 RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVK----A 320
R+THIPTG+ V C E+SQL NKI A+ L+AKLL E +R E ++ DA+K A
Sbjct: 263 RLTHIPTGIVVTCQNEKSQLQNKISAMRVLQAKLL---ERKRQEERAEM--DALKTNEGA 317
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV HPY++VKD+RT +E ++ +V+DG+++ FI+S ++++
Sbjct: 318 SWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDIDGFIESGIRWR 365
>gi|336118944|ref|YP_004573716.1| peptide chain release factor 2 [Microlunatus phosphovorus NM-1]
gi|334686728|dbj|BAK36313.1| peptide chain release factor 2 [Microlunatus phosphovorus NM-1]
Length = 368
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 221/338 (65%), Gaps = 4/338 (1%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
E+AEL + A WD+ AQ L+ ++ +I+ + D ++++DD +++L E
Sbjct: 32 EIAELSEQVAAPDLWDDVDNAQRITSRLSALQSEIDRVADLRSRLDDLSVLIELATE--E 89
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
+DA L EA + + L A++ E+ LLSG YD A+++I + AGG DA D+A MLLR
Sbjct: 90 SDAASLAEAEAELSSLQHAVESLEVRTLLSGEYDPREALVTIRSEAGGVDAADFAAMLLR 149
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY+RW E+ Y V + S EEAGIKSA +V+ YAYG LS E+GTHR+VR SPF+ +
Sbjct: 150 MYLRWAERHGYPAEVYDTSYAEEAGIKSATFQVKAPYAYGTLSVEQGTHRLVRISPFDNQ 209
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G EV+P+ EE+ + IPE D+ I R+ G GGQ+VN ++AVRITH+PTG
Sbjct: 210 GRRQTSFAGVEVLPVT-EEADHIDIPEADIRIDVFRSSGPGGQSVNTTDSAVRITHLPTG 268
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ V C E+SQL NK AL L+A+LL A R +E+ ++GD + WG Q+R+YV H
Sbjct: 269 IVVSCQNEKSQLQNKAAALRVLQARLLEKARRDREAEMNALKGDGGNS-WGSQMRSYVLH 327
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
PY++VKD+RT E S +V DGEL+ FI+S ++++ +
Sbjct: 328 PYQMVKDLRTDFEVSSPDAVFDGELDGFIESGIRWRMT 365
>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
pentosaceus ATCC 25745]
Length = 343
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/331 (43%), Positives = 209/331 (63%), Gaps = 3/331 (0%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E K A+ +FWDN+ +AQ + ++K K + + +++ +L E D D +
Sbjct: 9 EAKMAEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDPD--V 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRW 157
E S + K L + L LL+G YD A+I I GAGGT++QDW MLLRMY RW
Sbjct: 67 QSEFESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRMYTRW 126
Query: 158 GEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQT 217
E+ ++K ++ + GE AGI S + + G AYGYL EKG HR+VR SPF++ G R T
Sbjct: 127 AEQHQFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHT 186
Query: 218 SFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRC 277
SF+ +VMP L ++S++V I ++DL + R+ G GGQ++NK +AVRITH+PTG+ V
Sbjct: 187 SFASVDVMPEL-DDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVAS 245
Query: 278 TEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLV 337
ERSQL N+ A+S LKAKL + E+++A E +I G ++ WG QIR+YVFHPY +V
Sbjct: 246 QAERSQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFHPYSMV 305
Query: 338 KDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KD R+ ET+++ VMDG+ + FI +YL++K
Sbjct: 306 KDHRSNFETANVQGVMDGDFDDFINAYLQWK 336
>gi|357011498|ref|ZP_09076497.1| PrfB [Paenibacillus elgii B69]
Length = 336
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/328 (43%), Positives = 213/328 (64%), Gaps = 5/328 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ AQ+ + VK ++ ++ +D + +L +E D ++
Sbjct: 1 MSAPD--FWDDNERAQKLIGEANGVKSVVDEFQALASEYEDLEVMAQLMQE--EQDDSMV 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E + I L K L+ FEL LLS PYD+ A++ + GAGGT++QDWA+MLLRMY RW
Sbjct: 57 AEIEAGIASLIKKLENFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ +K V++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 117 EKRDFKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + ++ ++++I EDL++ RA G GGQ++N ++AVRITH+PTGV V C
Sbjct: 177 FVSCDVMPEI-DDDVEIEIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTGVVVSCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A+ L++KL E++ ++ +IRG+ WG QIR+YVFHPY +VK
Sbjct: 236 TERSQIKNRERAMKMLRSKLYEKKIEEQQKQLAEIRGEVSDIAWGSQIRSYVFHPYSMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RT ET ++ +VMDG+L+ FI +YL+
Sbjct: 296 DHRTQEETGNVGAVMDGDLDAFIDAYLR 323
>gi|421186916|ref|ZP_15644297.1| peptide chain release factor 2 [Oenococcus oeni AWRIB418]
gi|399965166|gb|EJN99792.1| peptide chain release factor 2 [Oenococcus oeni AWRIB418]
Length = 372
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 221/363 (60%), Gaps = 2/363 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++ I G GGT++ DWA L RMY RW + +K V + G+ AGI SA + + G
Sbjct: 125 NNAILEIHPGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIG 184
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYG+L EKG HR VR SPF++ G R TSF +VMP L ++ ++++I +D+++
Sbjct: 185 HNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVY 244
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQNVNKV TAVR+THIPTG+ V ER+Q N+ A+ LKAKL E++R
Sbjct: 245 RSGGAGGQNVNKVSTAVRLTHIPTGLVVASQVERTQYGNRDIAMKMLKAKLYEREEQKRE 304
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
E ++ G + WG QIR+YVF PY++VKD+R+G+ET D VMDG L+PFI +YLK+
Sbjct: 305 EEHAKLSGTKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKW 364
Query: 368 KYS 370
K S
Sbjct: 365 KLS 367
>gi|322389911|ref|ZP_08063451.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
903]
gi|321143347|gb|EFX38785.1| peptide chain release factor RF2 [Streptococcus parasanguinis ATCC
903]
Length = 336
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/339 (43%), Positives = 220/339 (64%), Gaps = 5/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+E+A LE K + FWD+ AQ+T Q L ++K D++ ++ E
Sbjct: 1 MEEEIAILENKMTEPDFWDDNIAAQKTSQELNELKQTYENFHQMVDLFDESEILLDFLAE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
DS + EE ++EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DM
Sbjct: 61 DDS----VKEELIEKLEELDKRMTSYEMTLLLSEPYDNNNAILEIHPGSGGTEAQDWGDM 116
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY R+G +K V++ G+EAGIKS + EG +AYG L E G HR+VR SPF
Sbjct: 117 LLRMYTRFGNAHGFKVEVLDYQAGDEAGIKSVTLSFEGPHAYGLLKSEMGVHRLVRISPF 176
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF+ EVMP L + +++V++ ++D+++ R+GG GGQNVNKV T VR+THI
Sbjct: 177 DSAKRRHTSFTSVEVMPEL-DNTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHI 235
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+Y
Sbjct: 236 PTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKKAAEVDSLKGDKKEITWGSQIRSY 295
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VF PY +VKD RT +E + + VMDG+++ FI +YLK++
Sbjct: 296 VFTPYTMVKDHRTNYEVAQVDKVMDGDIDGFIDAYLKWR 334
>gi|406991449|gb|EKE10956.1| hypothetical protein ACD_15C00166G0004 [uncultured bacterium]
Length = 329
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/330 (42%), Positives = 221/330 (66%), Gaps = 5/330 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E +++ FW++ +A +Q + +++ +I+ L+ +T++D+ +++++E + +
Sbjct: 1 MEAESSKEGFWNDSQKASGIMQEIEELRKEISELSSLETEIDE---LIEMSEIISADSVE 57
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
LE I+ E K +++ E LL G YD+ +++I AGAGG DAQDW +MLLRMY+R
Sbjct: 58 ALEMQGRIV-EFEKEIEKLEFKILLGGEYDRNNVIMAIHAGAGGVDAQDWTEMLLRMYLR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+ EK+ + +++ +S G EAGIKS +E+ G YAYGY E G HR+VR SPFN+ LRQ
Sbjct: 117 FCEKKGFSAKILSESRGSEAGIKSVTLEIVGAYAYGYFQSEAGVHRLVRLSPFNSDNLRQ 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ E++P++ +V+I ++D+ + R+ G GGQ+VN ++AVRITHIPT + V
Sbjct: 177 TSFALVEILPVISNME-EVEISQQDIRVDVYRSSGAGGQSVNTTDSAVRITHIPTQIVVT 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
C ERSQL NK +A+ L+AKL +R E K++RG+ AEWG QIR+YV HPYK+
Sbjct: 236 CQNERSQLQNKEQAMKILRAKLHQKYLTEREEEKKKLRGEFSSAEWGSQIRSYVVHPYKM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VKD RT +ET++ V++G+L+ F+++YLK
Sbjct: 296 VKDHRTKYETTNAEGVLNGDLQNFMEAYLK 325
>gi|403068168|ref|ZP_10909500.1| peptide chain release factor RF-2 [Oceanobacillus sp. Ndiop]
Length = 327
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 207/325 (63%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++ AQ+ + +K + + ++++ V +L +E DA L E+
Sbjct: 2 ADPEFWNDQDSAQKVINEANGLKGYVENFEAIEEQLENLVVSYELVKE--ENDAELFEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S ++ K ++ FEL LLS PYD A++ + GAGGT++QDWA MLLRMY RWGE +
Sbjct: 60 QSELETFMKDVNDFELQMLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWGEDR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 DFKVETLDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V P + E+ +D+++ ED+++ RA G GGQ+VNK ++AVRITH+PT V C ER
Sbjct: 180 CDVTPEMTED-VDIEVRAEDIKVDTYRASGAGGQHVNKTDSAVRITHLPTNTVVTCQNER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ A+ LK+KL E++ E+ IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREAAMKMLKSKLYQYEIERQQRELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET + +VMDG++ PFI +YL+
Sbjct: 299 TNTETGNTQAVMDGDINPFIDAYLR 323
>gi|312130867|ref|YP_003998207.1| peptide chain release factor 2 [Leadbetterella byssophila DSM
17132]
gi|311907413|gb|ADQ17854.1| bacterial peptide chain release factor 2 (bRF-2) [Leadbetterella
byssophila DSM 17132]
Length = 358
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 225/357 (63%), Gaps = 8/357 (2%)
Query: 9 KDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN 68
KD+ A RV +R +++L +LE + A FW++ AQ ++ + +K+
Sbjct: 7 KDLRA---RVTALRGIFDYDNRKEKLGDLENQQAQPEFWNDSDHAQTVVKEIQVLKNWTE 63
Query: 69 LLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
+ + + D T+ + +E + + + EA ++ +++ EL ++LS D+
Sbjct: 64 AYEEAEASISDLETLFEFYQEGEVEEEEVDTEAKKTVQ----IIEELELKKMLSSEEDQF 119
Query: 129 GAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGR 188
A+I I +GAGGT++QDWA ML RMY+ W +K YK V+ + G+ AGIKSA ++++G
Sbjct: 120 SAIIEINSGAGGTESQDWASMLYRMYLMWAQKHGYKVTQVDWTDGDGAGIKSASMQIDGP 179
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
AYGYL E G HR+VR SPF++ R TSF+ PL+ +++++V++ + D+E SR
Sbjct: 180 LAYGYLKSENGVHRLVRISPFDSNARRHTSFASVYAYPLV-DDTIEVEVKDADIEWQTSR 238
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+GG GGQNVNKVET V++TH PTG+ + C ERSQLANK A++ LK++L I E+R +
Sbjct: 239 SGGAGGQNVNKVETKVQLTHKPTGIVIVCQIERSQLANKEHAMNMLKSRLYQIELEKRNA 298
Query: 309 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
I K EWG QIRNYVFHPYKLVKD RTGHETSDI VMDGE++ FIK+YL
Sbjct: 299 ARADIEASKKKIEWGSQIRNYVFHPYKLVKDARTGHETSDIQRVMDGEIDDFIKAYL 355
>gi|418619449|ref|ZP_13182277.1| peptide chain release factor 2 [Staphylococcus hominis VCU122]
gi|374824495|gb|EHR88453.1| peptide chain release factor 2 [Staphylococcus hominis VCU122]
Length = 331
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 210/327 (64%), Gaps = 2/327 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN+ +AQ+ + +K +N + K++D +L +E D + E+ I
Sbjct: 6 FWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQE--EYDDEIKEDLEQDI 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ +DQFEL LL GP+D A++ + GAGGT++QDWA MLLRMY R+GE+Q +K
Sbjct: 64 VSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKI 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+ +V+
Sbjct: 124 ETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVI 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ERSQ+
Sbjct: 184 PEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIK 243
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT E
Sbjct: 244 NREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEE 303
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMS 372
T+ + +VMDG++ PFI++YL+ S +
Sbjct: 304 TAKVDAVMDGDIAPFIEAYLRQTMSQN 330
>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
champanellensis 18P13]
Length = 375
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 219/338 (64%), Gaps = 7/338 (2%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT--E 88
+ EL +L ++ FWD+ ++Q+ +Q + +++ ++ K++D + ++ L E
Sbjct: 31 QSELDDLRIQVTYDGFWDDAEKSQKVMQKIRKLENTVDKFRHLNQKLEDTIALIDLCMEE 90
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
+ DS++ +L++ S +EL +L+ LL+G YD A+++ AGAGGT+AQDWA
Sbjct: 91 DDDSSNEEILQDVESFKEELEAE----KLSTLLTGEYDGSNAILTFHAGAGGTEAQDWAQ 146
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
ML RMY RW E+ +K +++ G+EAG+KSA + VEG+ AYG+L E G HR+VR SP
Sbjct: 147 MLYRMYNRWAERHDFKVSLLDYLDGDEAGLKSASMLVEGQNAYGFLKSEAGVHRLVRVSP 206
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
F+A G R TSF+ EVMP + ++SM+V I ED+++ R+ G GGQ++NK +AVR+TH
Sbjct: 207 FDASGRRHTSFAALEVMPEI-DDSMEVDIRLEDVKMDVFRSSGAGGQHINKTSSAVRLTH 265
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
IPTG+ V C +RSQ N+ A+ L++KL+ I E + +I I+G + WG QIR+
Sbjct: 266 IPTGIVVSCQTQRSQFQNRDFAMKMLRSKLVEIKEREHLEKISDIKGVQKEIAWGAQIRS 325
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
YVF PY L KD RTG E +I +VMDG+L+ FI +YLK
Sbjct: 326 YVFMPYTLAKDHRTGFENGNISAVMDGDLDGFINAYLK 363
>gi|333904674|ref|YP_004478545.1| peptide chain release factor 2 [Streptococcus parauberis KCTC
11537]
gi|333119939|gb|AEF24873.1| peptide chain release factor 2 [Streptococcus parauberis KCTC
11537]
gi|456370558|gb|EMF49454.1| Peptide chain release factor 2 [Streptococcus parauberis KRS-02109]
gi|457095857|gb|EMG26328.1| Peptide chain release factor 2 [Streptococcus parauberis KRS-02083]
Length = 327
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 216/327 (66%), Gaps = 5/327 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW++ AQ+T Q L ++K K + D + ++ +++ +E DS L EE
Sbjct: 2 SEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDS----LQEEL 57
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +++L++ L +E+T LLS PYD A++ I G+GGT+AQDWADML RMY R+G +
Sbjct: 58 EASLEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAK 117
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R TSF+
Sbjct: 118 GFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTS 177
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R
Sbjct: 178 VEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD R
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHR 296
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T E + + VMDG+++ FI +YLK++
Sbjct: 297 TSFEVAQVDKVMDGDIDGFIDAYLKWR 323
>gi|262037715|ref|ZP_06011157.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
gi|261748187|gb|EEY35584.1| peptide chain release factor 2 [Leptotrichia goodfellowii F0264]
Length = 348
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 222/352 (63%), Gaps = 12/352 (3%)
Query: 21 IRASAG---LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK--T 75
+R S G L L ++ +E K A+ FW NR +QETL+ L +K L+ +++ +
Sbjct: 1 MRKSGGIFDLDSLNLKIERIEKKTAEPDFW-NRENSQETLKELNILK---KLIEEYEKIS 56
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
M++ V++ + E +++ D +E I + + + F+ LL YD A+++I
Sbjct: 57 GMNEDVSV--MIEFIEAGDDSFEKELDDKIDTVTEEIQNFKTKLLLDEKYDSNNAILTIN 114
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGGT+A DW +ML RMY RW ++ +K V++ GEEAGIKS + ++G YAYGYL
Sbjct: 115 AGAGGTEACDWTEMLYRMYDRWSNRKDFKVEVLDSLSGEEAGIKSITLNIKGSYAYGYLK 174
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
GEKG HR+VR SPF++ G R TSF+ V+P + ++ ++V I EDL++ RA G GGQ
Sbjct: 175 GEKGVHRLVRISPFDSNGKRHTSFTAVNVVPEI-DDDVEVNIRPEDLKVDTYRASGAGGQ 233
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VN ++AVRITHIPT V C +ERSQL NK A+ LK++L I E+R E++ I+G
Sbjct: 234 HVNTTDSAVRITHIPTNTVVTCQKERSQLKNKETAMKILKSRLFEIELEKREKEMENIKG 293
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
K EWG QIR+YVF PYK+VKD RT E ++ VMDG+++ FI YLK+
Sbjct: 294 TESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVDKVMDGDIDSFINEYLKF 345
>gi|228942321|ref|ZP_04104860.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228975250|ref|ZP_04135808.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981888|ref|ZP_04142183.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
gi|410677595|ref|YP_006929966.1| peptide chain release factor 2 [Bacillus thuringiensis Bt407]
gi|423386667|ref|ZP_17363922.1| peptide chain release factor 2 [Bacillus cereus BAG1X1-2]
gi|423527006|ref|ZP_17503451.1| peptide chain release factor 2 [Bacillus cereus HuB1-1]
gi|452201675|ref|YP_007481756.1| Peptide chain release factor 2; programmed frameshift-containing
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
gi|228778000|gb|EEM26272.1| Peptide chain release factor 2 [Bacillus thuringiensis Bt407]
gi|228784529|gb|EEM32550.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817365|gb|EEM63451.1| Peptide chain release factor 2 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|401632088|gb|EJS49878.1| peptide chain release factor 2 [Bacillus cereus BAG1X1-2]
gi|402454169|gb|EJV85962.1| peptide chain release factor 2 [Bacillus cereus HuB1-1]
gi|409176724|gb|AFV21029.1| peptide chain release factor 2 [Bacillus thuringiensis Bt407]
gi|452107068|gb|AGG04008.1| Peptide chain release factor 2; programmed frameshift-containing
[Bacillus thuringiensis serovar thuringiensis str.
IS5056]
Length = 326
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQVVINEANALKD---MVGSFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
Length = 353
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 220/356 (61%), Gaps = 12/356 (3%)
Query: 21 IRASAGLQQLEK---ELAELEMKAADSSFWDNRAEAQETL---QALTDVKDKINLLTDFK 74
+ AS GL LEK +LAE E FWD+ +AQ + AL V D+ N L D
Sbjct: 1 MTASGGLFDLEKMEADLAEYEADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEY 60
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
++ +VK + D L +E + I+ + +E LLSG YD A++ I
Sbjct: 61 EELTLLNEMVK-----EEPDPDLSKELVNRIQAFQAKISAYERNILLSGEYDHNDALLEI 115
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
GAGGT++QDWA MLLRMY RW ++ Y+ ++ G+EAGIKS +E++G AYG+L
Sbjct: 116 HPGAGGTESQDWASMLLRMYQRWADQHDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFL 175
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
E G HR+VR SPF++ R TSF+ E+MP+L +++ +++I E D+E+ RA G GG
Sbjct: 176 KSEDGIHRLVRISPFDSNKRRHTSFASVEIMPVL-DQNTEIEIDESDIEMDVFRASGAGG 234
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q++NK +AVR+TH+PTG+ V +RSQ N+ A+ L+AKL + E+ A E+ +IR
Sbjct: 235 QHINKTSSAVRLTHVPTGIVVASQGQRSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIR 294
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
G+ + WG QIR+YVFHPY +VKD RT +ET+++ VMDG+L+ FI +YLK + S
Sbjct: 295 GEKSEIAWGSQIRSYVFHPYNMVKDHRTDYETANVQGVMDGDLDGFIDAYLKNQLS 350
>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 369
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/332 (41%), Positives = 209/332 (62%), Gaps = 3/332 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
++ELE + + FW+++ +AQE L ++ K++ + + DD T++ L +E
Sbjct: 34 ISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHLQKEFDDIDTLIDLGQE--EN 91
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D ++ E + + ++ L LL G YD+ +++I AGAGGT+AQDW +ML RM
Sbjct: 92 DGAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIHAGAGGTEAQDWTEMLYRM 151
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RW E Y+ +V++ G+EAG+KS E+ G AYGY+ E G HR+VR SPF+A G
Sbjct: 152 YTRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMRSEMGVHRLVRISPFDASG 211
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF+ EV+P L + S+ + I +DL I R+ G GGQ+VNK E+A+RITHIPTGV
Sbjct: 212 RRHTSFASVEVLPEL-DNSIQININPDDLRIDRYRSSGAGGQHVNKTESAIRITHIPTGV 270
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ A++ LK+KL +A+ + ++ ++G+ + WG QIR+YVF P
Sbjct: 271 VVSCQTERSQIQNRETAMNMLKSKLFALAKAAQMDKVDDLKGNQMDIAWGSQIRSYVFCP 330
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
Y +VKD RT +E + + VMDG+L+ FI +YL
Sbjct: 331 YTMVKDHRTNYEVTGVDKVMDGDLDGFINAYL 362
>gi|435854879|ref|YP_007316198.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
gi|433671290|gb|AGB42105.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
Length = 362
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 227/352 (64%), Gaps = 5/352 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
++++E+R S +L + +L+ K + FWD+ ++AQ+ + + ++DKI T F +
Sbjct: 13 EQLKELRRSLDYDKLVAKHEKLKEKMSQPDFWDDSSKAQQISKQASALQDKI---TGFDS 69
Query: 76 KMDDAVTIVKLTEE-MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+++ + L E + D ++ E ++L KA ++ EL LLSG YD A+++I
Sbjct: 70 LVEEREELEVLLELAIAEDDQAVIAEVKERSQKLVKAREELELKVLLSGEYDSNNALLAI 129
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
GAGGT++QDWA+MLLRMY RW E+ Y +E GEEAG+KS I+V G YAYGYL
Sbjct: 130 NPGAGGTESQDWAEMLLRMYTRWAEQHNYDLETLEFIPGEEAGVKSVTIQVSGDYAYGYL 189
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
EKG HR+VR SPF++ R TSF+ +VMP L +E ++V I + DL+I RA G GG
Sbjct: 190 KSEKGVHRLVRISPFDSSSRRHTSFASVDVMPEL-DEDIEVDIDKSDLKIETYRASGAGG 248
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q+VN ++AVRITH+PTG+ +C ERSQ N+ A+ L+AKL +E++A ++ +IR
Sbjct: 249 QHVNTTDSAVRITHLPTGIVAQCQNERSQHKNRQGAMKVLQAKLFEYLQEKQAEKLDEIR 308
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
G+ + WG QIR+YVFHPY+++KD RT ET VMDG+L+ I++YLK
Sbjct: 309 GEHKEIAWGNQIRSYVFHPYQMIKDHRTDFETGKTEQVMDGDLDQLIEAYLK 360
>gi|229164123|ref|ZP_04292059.1| Peptide chain release factor 2 [Bacillus cereus R309803]
gi|228619359|gb|EEK76249.1| Peptide chain release factor 2 [Bacillus cereus R309803]
Length = 326
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +K+ ++ F+ K+D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQVVINEANALKE---MVGKFR-KLDETFENLEITHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 EAEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E ++++I EDL+I RA G GGQ++N ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|357636987|ref|ZP_09134862.1| peptide chain release factor 2 [Streptococcus macacae NCTC 11558]
gi|357585441|gb|EHJ52644.1| peptide chain release factor 2 [Streptococcus macacae NCTC 11558]
Length = 325
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 212/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + D+ + ++ EE D + G LEE +
Sbjct: 6 FWNDNVAAQKTSQELNELKLKYETFNNMQELSDETELLQEMLEE-DESLQGELEEN---L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++L K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G Q +K
Sbjct: 62 EKLGKMMASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNNQGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +E+++V I +ED+++ R+GG GGQNVNKV T VR+TH PTG+ V T +R+Q
Sbjct: 182 PEL-DETIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHTPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + EE++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEEEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDG+L+ FI ++LK++
Sbjct: 301 VAQVDKVMDGDLDGFIDAFLKWR 323
>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
DSM 44385]
Length = 379
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 235/372 (63%), Gaps = 11/372 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +D+E + + I + L+ ++ ELE +A+D S WD+ AQ+ L+ V+
Sbjct: 4 DVSQDLEDLNSTLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQA 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAG-------LLEEAASIIKELNKALDQFELT 118
+I +T + ++DD + +L + D+T+AG E A S + L ++ E+
Sbjct: 64 QIKKVTTLRQRVDDMPVMYELAD--DATEAGDTDAADEAREMADSERETLRHEIESLEVQ 121
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGI 178
+LSG YD+ AV++I + AGG DA DWA+ML+RMY RW E+ +K V + S EEAGI
Sbjct: 122 TMLSGEYDEREAVVNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGI 181
Query: 179 KSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIP 238
KSA V G Y YG LS E+GTHR+VR SPF+ +G RQTSF+ EV+P++ E++ + I
Sbjct: 182 KSATFIVHGDYMYGQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-EKTDHIDID 240
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
E D+ + R+ G GGQ+VN ++AVR+THIPTG+ V C E+SQ+ NK A+ L AKL
Sbjct: 241 ENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL 300
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
L E+ +E+ ++GD + WG Q+R+YV HPY++VKD+RT +E +D V+DG+L+
Sbjct: 301 LDRKREEEQAEMNALKGDGSNS-WGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLD 359
Query: 359 PFIKSYLKYKYS 370
F+++ ++++ +
Sbjct: 360 GFLEAGIRWRMA 371
>gi|228474266|ref|ZP_04059001.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
gi|314936947|ref|ZP_07844294.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
hominis C80]
gi|228271625|gb|EEK12972.1| peptide chain release factor 2 [Staphylococcus hominis SK119]
gi|313655566|gb|EFS19311.1| peptide chain release factor 2 [Staphylococcus hominis subsp.
hominis C80]
Length = 332
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/327 (42%), Positives = 210/327 (64%), Gaps = 2/327 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWDN+ +AQ+ + +K +N + K++D +L +E D + E+ I
Sbjct: 7 FWDNQNKAQDVIDKNNALKSIVNGYYELNHKLEDMDATWELLQE--EYDDEIKEDLEQDI 64
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ +DQFEL LL GP+D A++ + GAGGT++QDWA MLLRMY R+GE+Q +K
Sbjct: 65 VSFREQIDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKI 124
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+ +V+
Sbjct: 125 ETIDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVI 184
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ERSQ+
Sbjct: 185 PEFDNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIK 244
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT E
Sbjct: 245 NREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEE 304
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMS 372
T+ + +VMDG++ PFI++YL+ S +
Sbjct: 305 TAKVDAVMDGDIAPFIEAYLRQTMSQN 331
>gi|24379740|ref|NP_721695.1| peptide chain release factor 2 [Streptococcus mutans UA159]
gi|449866982|ref|ZP_21779680.1| peptide chain release factor 2 [Streptococcus mutans U2B]
gi|449873235|ref|ZP_21781676.1| peptide chain release factor 2 [Streptococcus mutans 8ID3]
gi|449877936|ref|ZP_21783421.1| peptide chain release factor 2 [Streptococcus mutans S1B]
gi|449884229|ref|ZP_21785553.1| peptide chain release factor 2 [Streptococcus mutans SA38]
gi|449899062|ref|ZP_21790880.1| peptide chain release factor 2 [Streptococcus mutans R221]
gi|449905730|ref|ZP_21793178.1| peptide chain release factor 2 [Streptococcus mutans M230]
gi|449916946|ref|ZP_21797097.1| peptide chain release factor 2 [Streptococcus mutans 15JP3]
gi|449920886|ref|ZP_21798727.1| peptide chain release factor 2 [Streptococcus mutans 1SM1]
gi|449944755|ref|ZP_21806864.1| peptide chain release factor 2 [Streptococcus mutans 11A1]
gi|449952230|ref|ZP_21808895.1| peptide chain release factor 2 [Streptococcus mutans 11SSST2]
gi|449980525|ref|ZP_21817250.1| peptide chain release factor 2 [Streptococcus mutans 5SM3]
gi|449999072|ref|ZP_21824299.1| peptide chain release factor 2 [Streptococcus mutans N29]
gi|450005664|ref|ZP_21826797.1| peptide chain release factor 2 [Streptococcus mutans NMT4863]
gi|450041337|ref|ZP_21837339.1| peptide chain release factor 2 [Streptococcus mutans T4]
gi|450068351|ref|ZP_21847139.1| peptide chain release factor 2 [Streptococcus mutans NLML9]
gi|450079181|ref|ZP_21851242.1| peptide chain release factor 2 [Streptococcus mutans N3209]
gi|450084242|ref|ZP_21853222.1| peptide chain release factor 2 [Streptococcus mutans N66]
gi|450088436|ref|ZP_21854790.1| peptide chain release factor 2 [Streptococcus mutans NV1996]
gi|450133123|ref|ZP_21870454.1| peptide chain release factor 2 [Streptococcus mutans NLML8]
gi|24377701|gb|AAN59001.1|AE014966_11 putative peptide chain release factor (RF-2) [Streptococcus mutans
UA159]
gi|449148348|gb|EMB52229.1| peptide chain release factor 2 [Streptococcus mutans 11A1]
gi|449151862|gb|EMB55584.1| peptide chain release factor 2 [Streptococcus mutans NLML8]
gi|449154170|gb|EMB57777.1| peptide chain release factor 2 [Streptococcus mutans 8ID3]
gi|449154687|gb|EMB58250.1| peptide chain release factor 2 [Streptococcus mutans 15JP3]
gi|449158039|gb|EMB61465.1| peptide chain release factor 2 [Streptococcus mutans 1SM1]
gi|449165416|gb|EMB68425.1| peptide chain release factor 2 [Streptococcus mutans 11SSST2]
gi|449176760|gb|EMB79088.1| peptide chain release factor 2 [Streptococcus mutans 5SM3]
gi|449187401|gb|EMB89190.1| peptide chain release factor 2 [Streptococcus mutans N29]
gi|449188333|gb|EMB90049.1| peptide chain release factor 2 [Streptococcus mutans NMT4863]
gi|449197832|gb|EMB98979.1| peptide chain release factor 2 [Streptococcus mutans T4]
gi|449207075|gb|EMC07757.1| peptide chain release factor 2 [Streptococcus mutans NLML9]
gi|449209113|gb|EMC09652.1| peptide chain release factor 2 [Streptococcus mutans N3209]
gi|449211890|gb|EMC12277.1| peptide chain release factor 2 [Streptococcus mutans N66]
gi|449216566|gb|EMC16675.1| peptide chain release factor 2 [Streptococcus mutans NV1996]
gi|449249194|gb|EMC47340.1| peptide chain release factor 2 [Streptococcus mutans SA38]
gi|449250165|gb|EMC48240.1| peptide chain release factor 2 [Streptococcus mutans S1B]
gi|449257911|gb|EMC55521.1| peptide chain release factor 2 [Streptococcus mutans M230]
gi|449258891|gb|EMC56446.1| peptide chain release factor 2 [Streptococcus mutans R221]
gi|449263551|gb|EMC60923.1| peptide chain release factor 2 [Streptococcus mutans U2B]
Length = 325
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 214/323 (66%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG+ AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|229099612|ref|ZP_04230540.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
gi|229105789|ref|ZP_04236418.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
gi|229118678|ref|ZP_04248030.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
gi|407707656|ref|YP_006831241.1| protein hemK [Bacillus thuringiensis MC28]
gi|423377019|ref|ZP_17354303.1| peptide chain release factor 2 [Bacillus cereus BAG1O-2]
gi|423440122|ref|ZP_17417028.1| peptide chain release factor 2 [Bacillus cereus BAG4X2-1]
gi|423449719|ref|ZP_17426598.1| peptide chain release factor 2 [Bacillus cereus BAG5O-1]
gi|423463195|ref|ZP_17439963.1| peptide chain release factor 2 [Bacillus cereus BAG6O-1]
gi|423532548|ref|ZP_17508966.1| peptide chain release factor 2 [Bacillus cereus HuB2-9]
gi|423542189|ref|ZP_17518579.1| peptide chain release factor 2 [Bacillus cereus HuB4-10]
gi|423548421|ref|ZP_17524779.1| peptide chain release factor 2 [Bacillus cereus HuB5-5]
gi|423619123|ref|ZP_17594956.1| peptide chain release factor 2 [Bacillus cereus VD115]
gi|423621786|ref|ZP_17597564.1| peptide chain release factor 2 [Bacillus cereus VD148]
gi|228664870|gb|EEL20360.1| Peptide chain release factor 2 [Bacillus cereus Rock1-3]
gi|228677678|gb|EEL31926.1| Peptide chain release factor 2 [Bacillus cereus Rock3-28]
gi|228683908|gb|EEL37858.1| Peptide chain release factor 2 [Bacillus cereus Rock3-29]
gi|401128000|gb|EJQ35707.1| peptide chain release factor 2 [Bacillus cereus BAG5O-1]
gi|401169526|gb|EJQ76772.1| peptide chain release factor 2 [Bacillus cereus HuB4-10]
gi|401176095|gb|EJQ83293.1| peptide chain release factor 2 [Bacillus cereus HuB5-5]
gi|401251836|gb|EJR58106.1| peptide chain release factor 2 [Bacillus cereus VD115]
gi|401262815|gb|EJR68952.1| peptide chain release factor 2 [Bacillus cereus VD148]
gi|401639621|gb|EJS57358.1| peptide chain release factor 2 [Bacillus cereus BAG1O-2]
gi|402419893|gb|EJV52165.1| peptide chain release factor 2 [Bacillus cereus BAG4X2-1]
gi|402422066|gb|EJV54308.1| peptide chain release factor 2 [Bacillus cereus BAG6O-1]
gi|402464802|gb|EJV96490.1| peptide chain release factor 2 [Bacillus cereus HuB2-9]
Length = 326
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +KD ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQTVINEANALKD---MVGKFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E +++++ EDL+I RA G GGQ++N ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDE-VEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLR 323
>gi|450072277|ref|ZP_21848514.1| peptide chain release factor 2 [Streptococcus mutans M2A]
gi|449211586|gb|EMC11986.1| peptide chain release factor 2 [Streptococcus mutans M2A]
Length = 325
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 214/323 (66%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE +I
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMISYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG+ AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 367
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 215/339 (63%), Gaps = 7/339 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + ELE +A D S WD+ A AQ+ L+ + K+ L + +++D + +L EE
Sbjct: 28 LAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLESLRVRLEDMPVMYELAEE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L ++ + L A++ E+T +LSG YD AVI+I +GAGG DA DWA+M
Sbjct: 88 --EGDTSLADDE---LDSLESAIESLEVTTMLSGEYDPREAVINIRSGAGGVDAADWAEM 142
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY RW EK +K V + S EEAGIKSA V G Y YG LS E+G HR+VR SPF
Sbjct: 143 LMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRISPF 202
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+P++ E++ + IP+ D+ + R+ G GGQ+VN ++AVR+THI
Sbjct: 203 DNQGRRQTSFAEVEVLPVV-EQTDHIDIPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 261
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R+Y
Sbjct: 262 PTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDAL-GAGGNASWGNQMRSY 320
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V HPY++VKD+RT E D V+DG+++ F++S ++++
Sbjct: 321 VLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359
>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
pseudotuberculosis FRC41]
gi|375288161|ref|YP_005122702.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 3/99-5]
gi|384504178|ref|YP_005680848.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 1002]
gi|384506270|ref|YP_005682939.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis C231]
gi|384508358|ref|YP_005685026.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis I19]
gi|384510450|ref|YP_005690028.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis PAT10]
gi|385807033|ref|YP_005843430.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 267]
gi|387136117|ref|YP_005692097.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 42/02-A]
gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis C231]
gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 1002]
gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis I19]
gi|341824389|gb|AEK91910.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis PAT10]
gi|348606562|gb|AEP69835.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 42/02-A]
gi|371575450|gb|AEX39053.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 3/99-5]
gi|383804426|gb|AFH51505.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 267]
Length = 366
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/343 (42%), Positives = 222/343 (64%), Gaps = 6/343 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L + ELE +A+D + WDN AQ+ L+ V+ ++ LT + ++DD + +L
Sbjct: 26 EELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQRIDDMPVMYELA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE + D L +E + EL ++ E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 86 EE-EGDDTELADEE---LAELTSEIESLEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMYVRW EK K + + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 142 EMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRIS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E++ + IP+ ++ + R+ G GGQ+VN ++AVR+T
Sbjct: 202 PFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 261 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDAL-GAGGNASWGNQMR 319
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+YV HPY++VKD+RT +E +D V+DG+L+ F+++ ++++ +
Sbjct: 320 SYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWRMA 362
>gi|229175857|ref|ZP_04303355.1| Peptide chain release factor 2 [Bacillus cereus MM3]
gi|423399991|ref|ZP_17377164.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-2]
gi|423462035|ref|ZP_17438831.1| peptide chain release factor 2 [Bacillus cereus BAG5X2-1]
gi|423479316|ref|ZP_17456031.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-1]
gi|228607590|gb|EEK64914.1| Peptide chain release factor 2 [Bacillus cereus MM3]
gi|401133890|gb|EJQ41513.1| peptide chain release factor 2 [Bacillus cereus BAG5X2-1]
gi|401656618|gb|EJS74133.1| peptide chain release factor 2 [Bacillus cereus BAG2X1-2]
gi|402425620|gb|EJV57766.1| peptide chain release factor 2 [Bacillus cereus BAG6X1-1]
Length = 325
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +K+ ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQAVINEANALKE---MVGKFR-QLDETFENLEITHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 59 ESEVKGLIQEMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 GFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P +E ++++I EDL++ RA G GGQ++N ++AVRITH PT V C ER
Sbjct: 179 CEVVPEFNDE-VEIEIRSEDLKVDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSER 237
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +E+ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 238 SQIKNREHAMKMLKAKLYQKKLEEQQAELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 297
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E ++ +VMDGE++PFI +YL+
Sbjct: 298 TNTEVGNVQAVMDGEIDPFIDAYLR 322
>gi|404497221|ref|YP_006721327.1| peptide chain release factor 2 [Geobacter metallireducens GS-15]
gi|403378100|gb|ABB32591.2| peptide chain release factor 2 [Geobacter metallireducens GS-15]
Length = 372
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 224/355 (63%), Gaps = 3/355 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
VE S+R+ ++R S + +++ E+E A FWD+ +AQ+ L+ T ++ + L
Sbjct: 9 VENLSERIAKLRGSLDIDSKREDIQEMEAHIAAPGFWDDNEKAQQLLRERTRIEKILELW 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ DD +++L EE + D G L+E ++ +L K ++ E ++LSG +DK
Sbjct: 69 DRLTRQADDIRVLIELGEE--AGDEGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNAC 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
SI AGAGGT+AQDWA+MLLRMY+R+ E++ +KT + + G+EAG+KSA V+G YA
Sbjct: 127 YFSINAGAGGTEAQDWAEMLLRMYLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL E G HR+VR SPF++ R TSF+ P + E+ ++V I E DL I R+
Sbjct: 187 YGYLKAEAGIHRLVRISPFDSNARRHTSFASVFAFPEI-EDDIEVTINEADLRIDTYRSS 245
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VN ++AVRITHIPTG+ ERSQ NK A+ L+AKL ++R ++
Sbjct: 246 GAGGQHVNTTDSAVRITHIPTGLVAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKA 305
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+I G+ + WG QIR+YV HPYK+VKD+RTG ET + +V+DG+LE FI ++L
Sbjct: 306 AEIGGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVETGNPDAVLDGDLEEFIVAFL 360
>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
gi|19864260|sp|Q53915.2|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
Length = 368
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 235/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLGVLFEMAEEEDDPDT--RAEAESELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L +
Sbjct: 183 QSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|421298222|ref|ZP_15748911.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60080]
gi|395903494|gb|EJH14424.1| peptide chain release factor 2 [Streptococcus pneumoniae GA60080]
Length = 325
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS ++ EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVILSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + ++++A+E+ ++G + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAAEVDSLKGKKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|228999928|ref|ZP_04159500.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
gi|229007481|ref|ZP_04165078.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
gi|228753869|gb|EEM03310.1| Peptide chain release factor 2 [Bacillus mycoides Rock1-4]
gi|228759870|gb|EEM08844.1| Peptide chain release factor 2 [Bacillus mycoides Rock3-17]
Length = 326
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/329 (43%), Positives = 214/329 (65%), Gaps = 7/329 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +K+ ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 3 AGFWDDQQGAQTVINEANALKE---MVGKFR-QLDETFENLEVTHELLKEEYDEDLHEEL 58
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 59 ESEVKSLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 118
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 GFKVDTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 178
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P ++ +++++ EDL+I RA G GGQ+VN ++AVRITH PT V C ER
Sbjct: 179 CEVVPEFNDD-IEIEVRTEDLKIDTYRASGAGGQHVNTTDSAVRITHTPTNTVVTCQSER 237
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 238 SQIKNREHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 297
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDGE++PFI +YL+ + S
Sbjct: 298 TNTEVGNVQAVMDGEIDPFIDAYLRSRIS 326
>gi|310644311|ref|YP_003949070.1| protein chain release factor b [Paenibacillus polymyxa SC2]
gi|309249262|gb|ADO58829.1| Protein chain release factor B-like protein [Paenibacillus polymyxa
SC2]
Length = 339
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/333 (44%), Positives = 218/333 (65%), Gaps = 3/333 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+A E K A FWD+ +AQ + + VK ++ + + +DA +V+L EE
Sbjct: 2 IANFEEKMAAPDFWDDNEKAQGVIAEMNVVKSSVDSYEQLRQEYEDAGMMVELAEE--EG 59
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
D L+ E + IK L L++FEL LL+ PYDK A++ + GAGGT++QDW MLLRM
Sbjct: 60 DEALVGEVENSIKSLLSKLEEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRM 119
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y RWGEK+ +K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G
Sbjct: 120 YTRWGEKRGFKVETLDYLAGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSG 179
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF +V+P + ++ +D++I EDL+I RA G GGQ++N ++AVRITH+PTG+
Sbjct: 180 RRHTSFVSCDVVPEIADD-VDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGI 238
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V C ERSQ+ N+ +A++ L++KL E++ ++ +IRG+ WG QIR+YVFHP
Sbjct: 239 VVTCQNERSQIKNRERAMTMLRSKLYERKIEEQQQQLDEIRGEQSDIAWGSQIRSYVFHP 298
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y +VKD RT ET ++ +VMDG+L+PFI YL+
Sbjct: 299 YSMVKDHRTSVETGNVGAVMDGDLDPFIDGYLR 331
>gi|333398790|ref|ZP_08480603.1| peptide chain release factor 2 [Leuconostoc gelidum KCTC 3527]
Length = 372
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 228/356 (64%), Gaps = 2/356 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + RA+ L+ L +E+A+ E + +S FWD+ +AQ+ ++ +K++ + +
Sbjct: 15 ENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTN 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ ++ ++++ E D TD+ ++ E I + K ++ + L QLL+ PYD A++ +
Sbjct: 75 QAEEIDLLIEMLSE-DVTDSEMMTELEESIAKAQKDIETYNLEQLLTEPYDANNAILEVH 133
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G+GGT++ DW L RMY RW ++ ++ V++ G+EAGI SA I++ G A+G+L
Sbjct: 134 PGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLR 193
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR VR SPF++ G R TSF +VMP L ++++DV+I ++D+++ R+GG GGQ
Sbjct: 194 SEKGVHRFVRISPFDSAGRRHTSFVSVDVMPEL-DDTIDVEIRDDDVKMDVFRSGGAGGQ 252
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NVNKV T VR+TH PTG+ V T ER+Q N+ A+ LK KL + E++ +E + G
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTG 312
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
D ++ WG QIR+YV HPY++VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 313 DKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 368
>gi|167038149|ref|YP_001665727.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
gi|166856983|gb|ABY95391.1| peptide chain release factor 2 [Thermoanaerobacter pseudethanolicus
ATCC 33223]
Length = 330
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/327 (45%), Positives = 217/327 (66%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D +FW + ++QE + +K+ + +K +D T+++L ++ D + +E
Sbjct: 2 SDPAFWSDIKKSQELAKKQKALKELLEEYNSLVSKWEDLSTLIELG--LEEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
KEL K L+ ++ LL+GPYDK A++SI AG+GGT+AQDWA+MLLRMY RW +
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGPYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ GEEAGIKS + ++G +AYGYL E G HR+VR SPF+A G R TSF+
Sbjct: 120 GFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFAL 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P L E ++V+I EDL+I RA G GGQ VNK E+AVRITH+PTG+ V C ER
Sbjct: 180 VEVLPEL-ENDIEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKLL + +++ +I+ ++G+ +A WG QIR+YVF PY LVKD R
Sbjct: 239 SQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T +E ++ +VMDGE++ FI +YLK K
Sbjct: 299 TNYEVGNVQAVMDGEIDGFINAYLKQK 325
>gi|418193392|ref|ZP_12829885.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47439]
gi|353860115|gb|EHE40062.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47439]
Length = 325
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +++T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYDMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|111658353|ref|ZP_01409041.1| hypothetical protein SpneT_02000493 [Streptococcus pneumoniae
TIGR4]
gi|148997169|ref|ZP_01824823.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
gi|149010619|ref|ZP_01831990.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
gi|221231551|ref|YP_002510703.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
700669]
gi|298502540|ref|YP_003724480.1| peptide chain release factor RF2 [Streptococcus pneumoniae
TCH8431/19A]
gi|387626132|ref|YP_006062304.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
gi|410476198|ref|YP_006742957.1| peptide chain release factor 2 [Streptococcus pneumoniae
gamPNI0373]
gi|417312326|ref|ZP_12099040.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
gi|417686197|ref|ZP_12335475.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
gi|417693681|ref|ZP_12342870.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
gi|417698178|ref|ZP_12347351.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
gi|418082631|ref|ZP_12719833.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44288]
gi|418084827|ref|ZP_12722013.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47281]
gi|418093595|ref|ZP_12730724.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49138]
gi|418100485|ref|ZP_12737573.1| peptide chain release factor 2 [Streptococcus pneumoniae 7286-06]
gi|418118691|ref|ZP_12755649.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18523]
gi|418120832|ref|ZP_12757778.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44194]
gi|418123019|ref|ZP_12759954.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44378]
gi|418127606|ref|ZP_12764502.1| peptide chain release factor 2 [Streptococcus pneumoniae NP170]
gi|418129922|ref|ZP_12766806.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07643]
gi|418136776|ref|ZP_12773619.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11663]
gi|418141353|ref|ZP_12778166.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13455]
gi|418148186|ref|ZP_12784951.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13856]
gi|418150916|ref|ZP_12787663.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14798]
gi|418152492|ref|ZP_12789232.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16121]
gi|418164093|ref|ZP_12800767.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17371]
gi|418166368|ref|ZP_12803024.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17971]
gi|418170967|ref|ZP_12807594.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19451]
gi|418177777|ref|ZP_12814361.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41565]
gi|418184521|ref|ZP_12821069.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47283]
gi|418186762|ref|ZP_12823292.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47360]
gi|418188981|ref|ZP_12825496.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47373]
gi|418195662|ref|ZP_12832142.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47688]
gi|418198264|ref|ZP_12834724.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47778]
gi|418223025|ref|ZP_12849670.1| peptide chain release factor 2 [Streptococcus pneumoniae 5185-06]
gi|418227344|ref|ZP_12853963.1| peptide chain release factor 2 [Streptococcus pneumoniae 3063-00]
gi|418229494|ref|ZP_12856101.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP01]
gi|419424786|ref|ZP_13964986.1| peptide chain release factor 2 [Streptococcus pneumoniae 7533-05]
gi|419426911|ref|ZP_13967094.1| peptide chain release factor 2 [Streptococcus pneumoniae 5652-06]
gi|419429012|ref|ZP_13969181.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11856]
gi|419435630|ref|ZP_13975725.1| peptide chain release factor 2 [Streptococcus pneumoniae 8190-05]
gi|419437712|ref|ZP_13977784.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13499]
gi|419442245|ref|ZP_13982276.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13224]
gi|419444366|ref|ZP_13984381.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19923]
gi|419446494|ref|ZP_13986499.1| peptide chain release factor 2 [Streptococcus pneumoniae 7879-04]
gi|419449057|ref|ZP_13989054.1| peptide chain release factor 2 [Streptococcus pneumoniae 4075-00]
gi|419450729|ref|ZP_13990716.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP02]
gi|419452827|ref|ZP_13992801.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP03]
gi|419470717|ref|ZP_14010576.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07914]
gi|419472809|ref|ZP_14012660.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13430]
gi|419477420|ref|ZP_14017245.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18068]
gi|419481778|ref|ZP_14021572.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40563]
gi|419490684|ref|ZP_14030424.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47179]
gi|419492902|ref|ZP_14032629.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47210]
gi|419501494|ref|ZP_14041180.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47628]
gi|419503566|ref|ZP_14043237.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47760]
gi|419505698|ref|ZP_14045359.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49194]
gi|419510084|ref|ZP_14049728.1| peptide chain release factor 2 [Streptococcus pneumoniae NP141]
gi|419518559|ref|ZP_14058166.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08825]
gi|419520694|ref|ZP_14060291.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05245]
gi|419527591|ref|ZP_14067135.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17719]
gi|419529791|ref|ZP_14069322.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40028]
gi|419531992|ref|ZP_14071510.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47794]
gi|421208585|ref|ZP_15665610.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070005]
gi|421212755|ref|ZP_15669717.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070108]
gi|421214943|ref|ZP_15671874.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070109]
gi|421224608|ref|ZP_15681354.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070768]
gi|421233754|ref|ZP_15690376.1| peptide chain release factor 2 [Streptococcus pneumoniae 2061617]
gi|421238390|ref|ZP_15694959.1| peptide chain release factor 2 [Streptococcus pneumoniae 2071247]
gi|421242747|ref|ZP_15699269.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081074]
gi|421244584|ref|ZP_15701087.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081685]
gi|421247010|ref|ZP_15703497.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082170]
gi|421249058|ref|ZP_15705521.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082239]
gi|421270178|ref|ZP_15721035.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR48]
gi|421274666|ref|ZP_15725498.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52612]
gi|421287242|ref|ZP_15738008.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58771]
gi|421289397|ref|ZP_15740149.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54354]
gi|421304717|ref|ZP_15755373.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62331]
gi|421313930|ref|ZP_15764520.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47562]
gi|444383948|ref|ZP_21182121.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8106]
gi|444385510|ref|ZP_21183583.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8203]
gi|444387425|ref|ZP_21185447.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS125219]
gi|444390125|ref|ZP_21188040.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS70012]
gi|444393053|ref|ZP_21190713.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS81218]
gi|444394242|ref|ZP_21191795.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0002]
gi|444397193|ref|ZP_21194680.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0006]
gi|444400046|ref|ZP_21197469.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0007]
gi|444401586|ref|ZP_21198770.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0008]
gi|444405284|ref|ZP_21202197.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0009]
gi|444408868|ref|ZP_21205498.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0010]
gi|444410182|ref|ZP_21206730.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0076]
gi|444411908|ref|ZP_21208234.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0153]
gi|444415014|ref|ZP_21211261.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0199]
gi|444416749|ref|ZP_21212828.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0360]
gi|444419286|ref|ZP_21215159.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0427]
gi|444422599|ref|ZP_21218248.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0446]
gi|147756869|gb|EDK63909.1| peptide chain release factor 2 [Streptococcus pneumoniae SP11-BS70]
gi|147765100|gb|EDK72029.1| peptide chain release factor 2 [Streptococcus pneumoniae SP19-BS75]
gi|220674011|emb|CAR68524.1| peptide chain release factor 2 [Streptococcus pneumoniae ATCC
700669]
gi|298238135|gb|ADI69266.1| peptide chain release factor RF2 [Streptococcus pneumoniae
TCH8431/19A]
gi|301793914|emb|CBW36310.1| peptide chain release factor 2 [Streptococcus pneumoniae INV104]
gi|327390112|gb|EGE88455.1| peptide chain release factor 2 [Streptococcus pneumoniae GA04375]
gi|332076034|gb|EGI86500.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41301]
gi|332202619|gb|EGJ16688.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41317]
gi|332204764|gb|EGJ18829.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47901]
gi|353758068|gb|EHD38661.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44288]
gi|353760062|gb|EHD40644.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47281]
gi|353765471|gb|EHD46013.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49138]
gi|353773194|gb|EHD53693.1| peptide chain release factor 2 [Streptococcus pneumoniae 7286-06]
gi|353791392|gb|EHD71770.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18523]
gi|353793659|gb|EHD74018.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44194]
gi|353798492|gb|EHD78822.1| peptide chain release factor 2 [Streptococcus pneumoniae GA44378]
gi|353800067|gb|EHD80381.1| peptide chain release factor 2 [Streptococcus pneumoniae NP170]
gi|353803214|gb|EHD83506.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07643]
gi|353805604|gb|EHD85878.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13455]
gi|353812861|gb|EHD93094.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13856]
gi|353814799|gb|EHD95022.1| peptide chain release factor 2 [Streptococcus pneumoniae GA14798]
gi|353819137|gb|EHD99335.1| peptide chain release factor 2 [Streptococcus pneumoniae GA16121]
gi|353829964|gb|EHE10094.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17971]
gi|353832420|gb|EHE12538.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17371]
gi|353837137|gb|EHE17223.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19451]
gi|353844551|gb|EHE24594.1| peptide chain release factor 2 [Streptococcus pneumoniae GA41565]
gi|353852119|gb|EHE32109.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47283]
gi|353853348|gb|EHE33331.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47360]
gi|353856123|gb|EHE36092.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47373]
gi|353862189|gb|EHE42122.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47688]
gi|353862902|gb|EHE42832.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47778]
gi|353880297|gb|EHE60113.1| peptide chain release factor 2 [Streptococcus pneumoniae 5185-06]
gi|353882945|gb|EHE62754.1| peptide chain release factor 2 [Streptococcus pneumoniae 3063-00]
gi|353889680|gb|EHE69448.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP01]
gi|353902704|gb|EHE78232.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11663]
gi|379540166|gb|EHZ05340.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13499]
gi|379540597|gb|EHZ05769.1| peptide chain release factor 2 [Streptococcus pneumoniae GA05245]
gi|379545433|gb|EHZ10572.1| peptide chain release factor 2 [Streptococcus pneumoniae GA07914]
gi|379552272|gb|EHZ17362.1| peptide chain release factor 2 [Streptococcus pneumoniae GA11856]
gi|379552316|gb|EHZ17405.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13430]
gi|379554212|gb|EHZ19292.1| peptide chain release factor 2 [Streptococcus pneumoniae GA13224]
gi|379566536|gb|EHZ31524.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17719]
gi|379566802|gb|EHZ31789.1| peptide chain release factor 2 [Streptococcus pneumoniae GA18068]
gi|379572059|gb|EHZ37016.1| peptide chain release factor 2 [Streptococcus pneumoniae GA19923]
gi|379574531|gb|EHZ39469.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40028]
gi|379581457|gb|EHZ46342.1| peptide chain release factor 2 [Streptococcus pneumoniae GA40563]
gi|379594263|gb|EHZ59073.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47179]
gi|379594940|gb|EHZ59749.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47210]
gi|379601855|gb|EHZ66627.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47628]
gi|379607612|gb|EHZ72358.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49194]
gi|379608748|gb|EHZ73493.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47794]
gi|379609164|gb|EHZ73905.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47760]
gi|379614034|gb|EHZ78744.1| peptide chain release factor 2 [Streptococcus pneumoniae 7879-04]
gi|379616407|gb|EHZ81103.1| peptide chain release factor 2 [Streptococcus pneumoniae 8190-05]
gi|379618364|gb|EHZ83039.1| peptide chain release factor 2 [Streptococcus pneumoniae 5652-06]
gi|379620441|gb|EHZ85097.1| peptide chain release factor 2 [Streptococcus pneumoniae 7533-05]
gi|379624115|gb|EHZ88748.1| peptide chain release factor 2 [Streptococcus pneumoniae 4075-00]
gi|379624628|gb|EHZ89259.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP02]
gi|379627411|gb|EHZ92023.1| peptide chain release factor 2 [Streptococcus pneumoniae EU-NP03]
gi|379633277|gb|EHZ97846.1| peptide chain release factor 2 [Streptococcus pneumoniae NP141]
gi|379641538|gb|EIA06073.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08825]
gi|395577055|gb|EJG37609.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070005]
gi|395581162|gb|EJG41635.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070108]
gi|395582502|gb|EJG42964.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070109]
gi|395591944|gb|EJG52239.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070768]
gi|395602651|gb|EJG62793.1| peptide chain release factor 2 [Streptococcus pneumoniae 2061617]
gi|395602977|gb|EJG63118.1| peptide chain release factor 2 [Streptococcus pneumoniae 2071247]
gi|395610067|gb|EJG70148.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081074]
gi|395610242|gb|EJG70321.1| peptide chain release factor 2 [Streptococcus pneumoniae 2081685]
gi|395614646|gb|EJG74664.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082170]
gi|395615687|gb|EJG75703.1| peptide chain release factor 2 [Streptococcus pneumoniae 2082239]
gi|395870830|gb|EJG81943.1| peptide chain release factor 2 [Streptococcus pneumoniae SPAR48]
gi|395875394|gb|EJG86475.1| peptide chain release factor 2 [Streptococcus pneumoniae GA52612]
gi|395889651|gb|EJH00658.1| peptide chain release factor 2 [Streptococcus pneumoniae GA58771]
gi|395890657|gb|EJH01663.1| peptide chain release factor 2 [Streptococcus pneumoniae GA54354]
gi|395905379|gb|EJH16284.1| peptide chain release factor 2 [Streptococcus pneumoniae GA62331]
gi|395914430|gb|EJH25274.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47562]
gi|406369143|gb|AFS42833.1| peptide chain release factor 2 [Streptococcus pneumoniae
gamPNI0373]
gi|444247868|gb|ELU54395.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8106]
gi|444250112|gb|ELU56596.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS8203]
gi|444253299|gb|ELU59757.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS125219]
gi|444256588|gb|ELU62926.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS70012]
gi|444261309|gb|ELU67613.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0002]
gi|444262424|gb|ELU68722.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0006]
gi|444262499|gb|ELU68795.1| peptide chain release factor 2 [Streptococcus pneumoniae PCS81218]
gi|444267432|gb|ELU73335.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0007]
gi|444267910|gb|ELU73793.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0008]
gi|444269162|gb|ELU74977.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0010]
gi|444274647|gb|ELU80292.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0009]
gi|444275240|gb|ELU80867.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0153]
gi|444278113|gb|ELU83589.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0076]
gi|444280814|gb|ELU86165.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0199]
gi|444285218|gb|ELU90299.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0360]
gi|444287129|gb|ELU92070.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0427]
gi|444288027|gb|ELU92930.1| peptide chain release factor 2 [Streptococcus pneumoniae PNI0446]
Length = 325
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|290892673|ref|ZP_06555665.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
gi|386009226|ref|YP_005927504.1| peptide chain release factor 2 [Listeria monocytogenes L99]
gi|404408886|ref|YP_006691601.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2376]
gi|404414526|ref|YP_006700113.1| peptide chain release factor 2 [Listeria monocytogenes SLCC7179]
gi|422810539|ref|ZP_16858950.1| peptide chain release factor 2, prfB [Listeria monocytogenes FSL
J1-208]
gi|290557733|gb|EFD91255.1| peptide chain release factor 2 [Listeria monocytogenes FSL J2-071]
gi|307572036|emb|CAR85215.1| peptide chain release factor 2 [Listeria monocytogenes L99]
gi|378751429|gb|EHY62019.1| peptide chain release factor 2, prfB [Listeria monocytogenes FSL
J1-208]
gi|404240225|emb|CBY61626.1| peptide chain release factor 2 [Listeria monocytogenes SLCC7179]
gi|404243035|emb|CBY64435.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2376]
Length = 338
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 216/337 (64%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + +FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WW2703/97]
Length = 352
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 214/340 (62%), Gaps = 2/340 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ E + E E A+ +FWDN+ +AQ+ + +K +N + ++DD L
Sbjct: 9 LENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E D + E+ + +D++EL LL GP+D A++ + GAGGT++QDW
Sbjct: 69 LQE--EFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDW 126
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML RMY R+ EK+ +K V+ G+EAGIKS + ++G AYGYL EKG HR+VR
Sbjct: 127 ANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 186
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RI
Sbjct: 187 SPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRI 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH P+G+ V ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QI
Sbjct: 247 THHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
R+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 307 RSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346
>gi|116333278|ref|YP_794805.1| protein chain release factor B [Lactobacillus brevis ATCC 367]
gi|116098625|gb|ABJ63774.1| bacterial peptide chain release factor 2 (bRF-2) [Lactobacillus
brevis ATCC 367]
Length = 343
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 212/333 (63%), Gaps = 3/333 (0%)
Query: 38 EMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL 97
E + A FWD+ AQ + ++K K++ T+++D + ++L +E DA +
Sbjct: 9 EGQMAQPDFWDDAQAAQLLIDETNEMKKKVDEFQRLVTQVEDLMVALELLQE--EPDAEM 66
Query: 98 LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRW 157
E + AL Q+ L LL+ YD A++ I GAGGT++QDW DMLLRMY RW
Sbjct: 67 QAEFETDFATAQAALRQYRLNLLLNQKYDHNNALLEIHPGAGGTESQDWGDMLLRMYTRW 126
Query: 158 GEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQT 217
E+ +K V++ G+ AG+ S + + GR AYGYL EKG HR+VR SPF++ G R T
Sbjct: 127 AEQHDFKVTVLDYQPGDVAGLSSVTLAIAGRNAYGYLRSEKGVHRLVRISPFDSAGRRHT 186
Query: 218 SFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRC 277
SF+ +V+P L ++S+D+ I +L++ RA G GGQ+VNK +AVRITHIPTG+ +
Sbjct: 187 SFASVDVLPEL-DDSVDIDINPAELKVDVYRASGAGGQHVNKTSSAVRITHIPTGIVTQS 245
Query: 278 TEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLV 337
+RSQL N+ AL+ L+AKL AEE++A E + GD ++ WG QIR+YVFHPY +V
Sbjct: 246 QAQRSQLQNRQTALAMLRAKLYERAEEKKAQEKAALEGDQMEIGWGSQIRSYVFHPYTMV 305
Query: 338 KDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
KD RT +ET + +VMDG+L+PFI ++L+++ S
Sbjct: 306 KDHRTNYETGNGQAVMDGDLDPFIDAFLQWQLS 338
>gi|332297634|ref|YP_004439556.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
gi|332180737|gb|AEE16425.1| Peptide chain release factor 2 [Treponema brennaborense DSM 12168]
Length = 378
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 211/340 (62%), Gaps = 4/340 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E ++E E + +S FW+N A+A++ + + +K++I D +DDA + +L
Sbjct: 28 IEAAISEKEALSGESGFWENPAKAEKVMTDIKQLKNRIEPWRDLIAAVDDAEALYELG-- 85
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
M+S D L E + + D+ + LLSG D+ GA ++I AGAGGT+A DWA M
Sbjct: 86 MESGDESLEAELKAAYDQAQAEYDRLSILNLLSGEVDRNGAFLTIHAGAGGTEACDWAQM 145
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L RMYVRW E++ +K V+ L E GIKS +++ G YAYGYL E G HR+VR SPF
Sbjct: 146 LCRMYVRWAERRGFKVETVDM-LEAEGGIKSVTLQISGEYAYGYLKSEAGIHRLVRISPF 204
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSFS V P+L +++++V I EDL + RAGG GGQ+VNK ++AVR TH+
Sbjct: 205 DSNARRHTSFSSVYVFPVL-DDTIEVDIRPEDLRVDTYRAGGAGGQHVNKTDSAVRFTHL 263
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C ERSQ N+ A+S L+A+L EQ+ E + + WG QIR+Y
Sbjct: 264 PTGIVVACQTERSQTMNRATAMSMLRARLYEYYREQKEKENAKFASEKKDISWGNQIRSY 323
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKY 369
VF PY +VKD RT HE +I SVMDG ++PFI+++L ++
Sbjct: 324 VFQPYTMVKDHRTKHEIGNIQSVMDGAIDPFIEAFLAAQW 363
>gi|323140697|ref|ZP_08075618.1| peptide chain release factor 2 [Phascolarctobacterium succinatutens
YIT 12067]
gi|322414821|gb|EFY05619.1| peptide chain release factor 2 [Phascolarctobacterium succinatutens
YIT 12067]
Length = 329
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 209/325 (64%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
D +FWD+ +AQ+T Q + +K++++ +DD + ++ E D LL E
Sbjct: 2 GDPTFWDDPEKAQKTAQDVNSLKEEVDGFHKLSAGVDDLEALQEMAAE--ENDESLLPEM 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
++ + L+ EL LLSG YD A++++ AGAGGT+AQDW MLLRM+ R+ E+
Sbjct: 60 DELLAKCRSELEHLELGMLLSGEYDANNAILTLHAGAGGTEAQDWTSMLLRMFTRFAEQN 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ +++ G+EAG+KSA I+V G AYG+L EKG HR+VR SPF+A R TSF+
Sbjct: 120 GFALEMLDYQPGDEAGVKSATIQVNGHNAYGFLRSEKGVHRLVRISPFDANARRHTSFAA 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++DV I +++ + R+ G GGQ+VNK +AVR+TH PTG+ V+C ER
Sbjct: 180 VDVMPEL-DDTVDVNINMDEVRVDVYRSSGAGGQHVNKTSSAVRMTHEPTGIVVQCQNER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ + L L+AKL + ++ + + I GD EWG QIR+YVF PY +VKD R
Sbjct: 239 SQIQNRERCLQMLRAKLYEYEKAKQDALVSDIAGDYQNIEWGSQIRSYVFQPYTMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
TG ET +I +VMDG+L PF+++YL+
Sbjct: 299 TGCETGNIQAVMDGDLMPFVEAYLR 323
>gi|322388283|ref|ZP_08061887.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
700779]
gi|321140955|gb|EFX36456.1| peptide chain release factor RF2 [Streptococcus infantis ATCC
700779]
Length = 325
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N KMD+ V++ + + D + +E +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDESVKDELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL++ + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 SELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|306833909|ref|ZP_07467033.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
gi|336064662|ref|YP_004559521.1| peptide chain release factor 2 [Streptococcus pasteurianus ATCC
43144]
gi|304423910|gb|EFM27052.1| peptide chain release factor RF2 [Streptococcus bovis ATCC 700338]
gi|334282862|dbj|BAK30435.1| peptide chain release factor 2 [Streptococcus pasteurianus ATCC
43144]
Length = 325
Score = 291 bits (744), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 141/323 (43%), Positives = 212/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L +K + + D+ +++ +E DS A L E +
Sbjct: 6 FWNDNIAAQKTSQELNGLKQTYETFNEMQELSDETELYLEMLDEDDSVQAELEES----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++L+K + +E+T LLS PYD+ A++ I G+GGT+AQDWADML RMY R+G + +K
Sbjct: 62 EKLDKIMTSYEMTLLLSEPYDRNNAILEIHPGSGGTEAQDWADMLFRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSFS EVM
Sbjct: 122 ETLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFSSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RTG+E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDG+++ FI +YLK++
Sbjct: 301 IAQVDKVMDGDIDGFIDAYLKWR 323
>gi|421276644|ref|ZP_15727465.1| peptide chain release factor 2 [Streptococcus mitis SPAR10]
gi|395876850|gb|EJG87922.1| peptide chain release factor 2 [Streptococcus mitis SPAR10]
Length = 325
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N KMD+ V++ + + D + +E +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFH----KMDELQDEVEILLDFLAEDESVKDELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL++ + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 DELDQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|57866389|ref|YP_188014.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
gi|71153101|sp|Q8CPZ1.2|RF2_STAES RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|71153102|sp|Q5HQX5.1|RF2_STAEQ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|57637047|gb|AAW53835.1| peptide chain release factor 2 [Staphylococcus epidermidis RP62A]
Length = 371
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 220/360 (61%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+++++E + + +IR S L+ E + E E D FW+++ +AQ+ + +K
Sbjct: 6 IKRNLEEYQNHLNQIRGSLDLENKETNIQEYEEMMTDPDFWNDQTKAQDIIDKNNALKSI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N +DD +L +E D + E ++ + +DQ+EL LL GP+D
Sbjct: 66 VNGYYQLTNAVDDMSATRELLQEEYDEDMKIELEEEV--QQFEEQIDQYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDW MLLRMY R+ E+ +K V+ G+EAG+KS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQNGFKVETVDYLPGDEAGVKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH PTG+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ WG QIR+YVFHPY ++KD RT ET + +VMDGE+ PFI++YL+
Sbjct: 304 EQEMAEIRGEQKDIGWGSQIRSYVFHPYSMIKDHRTNEETGKVDAVMDGEIGPFIEAYLR 363
>gi|358465478|ref|ZP_09175424.1| peptide chain release factor 2 [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065599|gb|EHI75786.1| peptide chain release factor 2 [Streptococcus sp. oral taxon 058
str. F0407]
Length = 325
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ + E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQDLNELKNTYNTFRKMEELQDEVEILFDFLTEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|226225057|ref|YP_002759164.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258611946|ref|ZP_05243310.2| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
gi|293596308|ref|ZP_05230370.2| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
gi|293596920|ref|ZP_05265609.2| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
gi|300764992|ref|ZP_07074980.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
gi|404282067|ref|YP_006682965.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2755]
gi|404287880|ref|YP_006694466.1| peptide chain release factor 2 [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|405750854|ref|YP_006674320.1| peptide chain release factor 2 [Listeria monocytogenes ATCC 19117]
gi|405753717|ref|YP_006677182.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2378]
gi|406705244|ref|YP_006755598.1| peptide chain release factor 2 [Listeria monocytogenes L312]
gi|424715322|ref|YP_007016037.1| Peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. LL195]
gi|424824259|ref|ZP_18249272.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
A]
gi|225877519|emb|CAS06233.1| Putative peptide chain release factor 2 [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258607352|gb|EEW19960.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-503]
gi|293583807|gb|EFF95839.1| peptide chain release factor 2 [Listeria monocytogenes HPB2262]
gi|293594612|gb|EFG02373.1| peptide chain release factor 2 [Listeria monocytogenes FSL J1-194]
gi|300514292|gb|EFK41351.1| peptide chain release factor 2 [Listeria monocytogenes FSL N1-017]
gi|332312939|gb|EGJ26034.1| Peptide chain release factor 2 [Listeria monocytogenes str. Scott
A]
gi|404220054|emb|CBY71418.1| peptide chain release factor 2 [Listeria monocytogenes ATCC 19117]
gi|404222917|emb|CBY74280.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2378]
gi|404228702|emb|CBY50107.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2755]
gi|404246809|emb|CBY05034.1| peptide chain release factor 2 [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|406362274|emb|CBY68547.1| peptide chain release factor 2 [Listeria monocytogenes L312]
gi|424014506|emb|CCO65046.1| Peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. LL195]
Length = 338
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 216/337 (64%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + +FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLR 334
>gi|424780263|ref|ZP_18207143.1| Peptide chain release factor 2 [Catellicoccus marimammalium
M35/04/3]
gi|422843221|gb|EKU27662.1| Peptide chain release factor 2 [Catellicoccus marimammalium
M35/04/3]
Length = 327
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 145/328 (44%), Positives = 207/328 (63%), Gaps = 7/328 (2%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ A++ + + K ++ + + ++ +V+L E TDA
Sbjct: 1 MSAPD--FWDDAERARKIIAEVNLAKKQLETFQSLEQQQEELEMMVELAE----TDADFQ 54
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
+E + + + L +EL QLL PYD A++ I GAGGT++QDW MLLRMY RW
Sbjct: 55 QELEEQLPQFEEQLGAYELEQLLDDPYDHNNALLEIHPGAGGTESQDWGSMLLRMYQRWA 114
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK +K ++ G+EAGIKS + ++G AYGYL E G HR+VR SPF+A R TS
Sbjct: 115 EKHHFKVETMDYQPGDEAGIKSVTLLIKGENAYGYLKSEHGVHRLVRISPFDAANRRHTS 174
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ EVMP + E+ +D++I +EDL+I RA G GGQ++NK E+AVRITH+PTG+ V
Sbjct: 175 FASVEVMPEINED-IDIEIKDEDLKIDTYRASGAGGQHINKTESAVRITHLPTGIVVASQ 233
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
+RSQL N+ A++ LKAKL E++A E +RG+ ++ WG QIR+YVFHPY +VK
Sbjct: 234 AQRSQLKNREIAMNMLKAKLYQKEMEKKAEEQAALRGEQMENGWGSQIRSYVFHPYTMVK 293
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLK 366
D RT HET + +VMDG+L+ F+ YL+
Sbjct: 294 DHRTQHETGNGQAVMDGDLDAFMNEYLR 321
>gi|342215025|ref|ZP_08707694.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590131|gb|EGS33380.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 330
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 220/332 (66%), Gaps = 3/332 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+D FW++ A++ Q T +KD + T +++A ++++ +D D + E
Sbjct: 2 SDPDFWNDPDSARDISQEATQLKDAVEGYKKLVTDIEEAKLMLEMA--IDEEDVSMEGEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+++++L ++ E+ LLSG YDK A+++ AGAGGT+AQDW ML+RMY+RW EKQ
Sbjct: 60 TTMVEQLTHEVEHREVLLLLSGEYDKNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKQ 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
Y ++++ +G+EAGIKSA ++G A+GY+ EKG HR+VR SPF++ R TSF
Sbjct: 120 GYSISLMDEQVGDEAGIKSATFLIKGENAFGYMKSEKGVHRLVRISPFDSAARRHTSFCA 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP + +E++++ + +D+++ RA G GGQ++NK ++AVR+THIPTG+ V+C ER
Sbjct: 180 VDVMPEI-DETVEINLDMKDVQVDTYRASGAGGQHINKTDSAVRMTHIPTGIVVQCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ + L L+AKL + E++A +Q+ G EWG QIR+YVFHPY +VKD R
Sbjct: 239 SQIQNREQCLKLLRAKLFELELEKQAELKEQLGGTYQAIEWGSQIRSYVFHPYNMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
T ET ++ +VMDG L+ F++ +LK + ++S+
Sbjct: 299 TSVETGNVQAVMDGNLDQFMEGFLKKEANLSI 330
>gi|300174043|ref|YP_003773209.1| peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
18811]
gi|299888422|emb|CBL92390.1| Peptide chain release factor 2 [Leuconostoc gasicomitatum LMG
18811]
Length = 372
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 137/356 (38%), Positives = 229/356 (64%), Gaps = 2/356 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + RA+ L+ L +E+A+ E + +S FWD+ +AQ+ ++ +K++ + + +
Sbjct: 15 ENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTS 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ ++ ++++ E D TD+ ++ E I + K ++ + L QLL+ PYD A++ +
Sbjct: 75 QAEEIDLLIEMLSE-DVTDSEMMSELEESIVKAQKDIETYNLEQLLTEPYDANNAILEVH 133
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G+GGT++ DW L RMY RW ++ ++ V++ G+EAGI SA I++ G A+G+L
Sbjct: 134 PGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFLR 193
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR VR SPF++ G R TSF +VMP L ++++D++I ++D+++ R+GG GGQ
Sbjct: 194 SEKGVHRFVRISPFDSAGRRHTSFVSVDVMPEL-DDTIDIEIRDDDVKMDVFRSGGAGGQ 252
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NVNKV T VR+TH PTG+ V T ER+Q N+ A+ LK KL + E++ +E + G
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALTG 312
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
D ++ WG QIR+YV HPY++VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 313 DKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 368
>gi|377809277|ref|YP_005004498.1| peptide chain release factor 2 [Pediococcus claussenii ATCC
BAA-344]
gi|361056018|gb|AEV94822.1| peptide chain release factor 2 [Pediococcus claussenii ATCC
BAA-344]
Length = 332
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/327 (43%), Positives = 206/327 (62%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+S FW++ EAQ + +K+K + + +++ ++L E DA + +
Sbjct: 2 AESDFWNDSVEAQALIDQNNILKEKYDNFERLQKHVENLEVTLELLES--EPDAEMQADL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ I+E NK L + L LL+GPYD A++ I GAGGT++QDW ML RMY RW E+
Sbjct: 60 EAEIEETNKLLRDYRLGLLLNGPYDANNAILEIHPGAGGTESQDWGSMLFRMYTRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++K +V + G+ AGI S I + G YGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 120 KFKVQVEDYQPGDVAGINSVTIRIIGHNVYGYLRSEKGVHRLVRLSPFDSAGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L +ES++V I +DL + R+ G GGQ++NK +AVRITH+PTG+ ER
Sbjct: 180 VDVMPEL-DESVEVNINPDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVAASQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ A+S LKAKL + EE++A E + G + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLQNRATAMSMLKAKLFELEEEKKAQEKAALEGIQLDIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET+++ VMDG+L+ FI +YL++K
Sbjct: 299 TNFETANVQGVMDGDLDGFINAYLQWK 325
>gi|262198721|ref|YP_003269930.1| hypothetical protein [Haliangium ochraceum DSM 14365]
gi|262082068|gb|ACY18037.1| conserved hypothetical protein [Haliangium ochraceum DSM 14365]
Length = 378
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 220/332 (66%), Gaps = 3/332 (0%)
Query: 34 LAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDST 93
+ ELE +AD +FWDNR +A+++L+ L +KD + +K+ DAV +++L E D+
Sbjct: 43 IEELESISADPAFWDNRQKAEDSLRELKSIKDVVGSYDKLSSKLADAVVLLELAE--DAE 100
Query: 94 DAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
DA EA + +E+ ++LD+ E ++LSG YD+ GAV+ I +GAGG DA DWA MLLRM
Sbjct: 101 DAESAIEARTAAEEIERSLDELEFRRMLSGEYDQGGAVLQINSGAGGVDAADWAQMLLRM 160
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
+R+ + + +K V+++ EEAGIKSA + + G YAYG L E G HR+VR SPF+A+
Sbjct: 161 ILRYADHKGWKAEVLDEQAAEEAGIKSATLVITGEYAYGLLKAEMGVHRLVRISPFDAQA 220
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
RQTSF+ V P + ++S+ V I E +L I RAGG GGQ+VNK E+AVRITH+P+G+
Sbjct: 221 RRQTSFAAVTVSPDI-DDSVHVDIDEGELRIDVYRAGGAGGQHVNKTESAVRITHLPSGI 279
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V+C ERSQ NK A+ L+++L + +R + + + K EWG QIR+YV P
Sbjct: 280 VVQCQNERSQHKNKASAMRVLRSRLYDYLKAERDAAAAEAAPEKKKIEWGSQIRSYVLAP 339
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
Y+ V D RT + ++ +V+DG+L+PFI++YL
Sbjct: 340 YRQVTDHRTDLKVGNVDAVLDGDLDPFIRTYL 371
>gi|418075863|ref|ZP_12713102.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47502]
gi|353749652|gb|EHD30295.1| peptide chain release factor 2 [Streptococcus pneumoniae GA47502]
Length = 325
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 216/325 (66%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N KM++ V++ + + D + +E + +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFH----KMEELQGEVEILLDFLAEDESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + ++++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|406920952|gb|EKD58931.1| hypothetical protein ACD_56C00025G0004 [uncultured bacterium]
Length = 302
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 139/265 (52%), Positives = 187/265 (70%), Gaps = 1/265 (0%)
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+++ K + E LL G YDK ++ + +GAGG DAQDW +MLLRMY+RW EK +
Sbjct: 37 EKIQKEFESLEFKSLLGGQYDKNDVILVLRSGAGGVDAQDWTEMLLRMYLRWSEKNGFSA 96
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+VE++ G EAGIKSA IE+ G YA+GYL E G HR+VR SPFNA LRQTSF+ AEV+
Sbjct: 97 HLVEETRGGEAGIKSATIEISGPYAFGYLQSEAGVHRLVRLSPFNADSLRQTSFAIAEVL 156
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P++ EE +V I +DL I RA G GGQ+VN ++AVRITH+PTGV V C ERSQL
Sbjct: 157 PII-EEIAEVNIQPQDLVIDTYRASGAGGQHVNTTDSAVRITHLPTGVVVTCQSERSQLQ 215
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK +A+ L+A++ E++ +E +++RG+ A+WG QIR+YV HPYK+VKD RT HE
Sbjct: 216 NKEQAMKVLRARIHQRYLEEQEAEKQKLRGEYKSADWGNQIRSYVLHPYKMVKDHRTKHE 275
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
TSD V+DGEL F++S+L++K S
Sbjct: 276 TSDAEKVLDGELYEFMESFLRWKAS 300
>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Length = 368
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 223/362 (61%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L++ E R++ +R+ L + ELE ++A +FWDN A + +D++D
Sbjct: 9 LKEKAENLQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDT 68
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
I+ +DA +++L + D +E + + + + L EL + +G +D
Sbjct: 69 IDNWQQVIDSFEDAEVLLELA--IAENDHETEQEVSRALNSVEQRLAAMELECMFNGEHD 126
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A+++I AGAGGT+AQDW D+LLRMY+RW EK+ + T +++ G+EAG KS + V+
Sbjct: 127 ASNAMLTIHAGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLVK 186
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR+AYGYL E G HR+VR SPF+ G R TSF+ + P L +++++V+I ++DL I
Sbjct: 187 GRWAYGYLRSEMGIHRLVRISPFDTGGRRHTSFASVFIFPEL-DDNIEVEINDKDLRIDT 245
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VNK +A+RITH+P+G+ V+C ERSQ NK A+ LKA+L R
Sbjct: 246 YRASGAGGQHVNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERANR 305
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E + + GD + WG QIR+YV PY+LVKD RT HET ++ +V+DG+L+PFI SYL
Sbjct: 306 KEEQQHLHGDKKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYLL 365
Query: 367 YK 368
++
Sbjct: 366 WQ 367
>gi|403382580|ref|ZP_10924637.1| protein PrfB [Paenibacillus sp. JC66]
Length = 334
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/339 (44%), Positives = 213/339 (62%), Gaps = 5/339 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M A D FWD+ AQ+ + L VKD + + +D ++ L EE D L
Sbjct: 1 MSAPD--FWDDNDRAQKMIAELNAVKDVVAEFASLNQEYEDLEVMLMLAEE--EGDESLE 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E + +L + L +EL LLS PYD+ A++ + GAGGT++QDWA+MLLRMY RW
Sbjct: 57 SELQEGVAKLTEKLKSYELQLLLSEPYDRMNAILELHPGAGGTESQDWAEMLLRMYRRWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
EK+ YK V++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TS
Sbjct: 117 EKRDYKVEVLDYLPGDEAGVKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +V+P + ++ +D++I EDL+I RA G GGQ++N ++AVRITHIPT V V C
Sbjct: 177 FVSCDVVPEI-DDDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTNVVVTCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ+ N+ +A+ L++KL E++ E+ +IRG+ + WG QIR+YVFHPY +VK
Sbjct: 236 TERSQIKNRERAMKILRSKLYERKLEEQRQELAEIRGEQREIGWGSQIRSYVFHPYSMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSASD 377
D RT ET ++ SVMDGEL+ I +YL+ + A D
Sbjct: 296 DHRTQAETGNVGSVMDGELDFLIDAYLRSQMDTKPGAKD 334
>gi|404330086|ref|ZP_10970534.1| peptide chain release factor 2 [Sporolactobacillus vineae DSM 21990
= SL153]
Length = 325
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 212/323 (65%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ + ++K+K++ L + K +D +L +E D DA L E + +
Sbjct: 4 FWDDNGKAQKVIDESNELKEKVDNLGKLEEKFEDLQVAYELVKEED--DADLKTELEASL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
E +KA +++E LLSGP+DK A++ + GAGGT+AQDWA MLLRMY RW E Y+
Sbjct: 62 GEASKAFNRYENRLLLSGPHDKSNAILELHPGAGGTEAQDWASMLLRMYTRWAESHGYQV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF+A G R TSF EV
Sbjct: 122 ETLDYLPGDEAGVKSVTLLIKGLDAYGYLKAEKGIHRLVRISPFDAAGRRHTSFVSCEVT 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++++D+++ ED+++ R+ G GGQ++NK +AVR+ HIPTG+ V C ERSQ
Sbjct: 182 PEI-DDTIDIEVRPEDVKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVVSCQSERSQFQ 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ LK++L + EE+R +E + G+ + WG QIR+YVFHPY +VKD RT E
Sbjct: 241 NRDQAMKMLKSRLYQLEEEKREAEKAALHGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
D+ VMDG+L+PFI +YL+ K
Sbjct: 301 VGDVNRVMDGDLDPFIDAYLRLK 323
>gi|365904806|ref|ZP_09442565.1| peptide chain release factor 2 [Lactobacillus versmoldensis KCTC
3814]
Length = 332
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 208/323 (64%), Gaps = 3/323 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ + ++K+K + + +DD +L EE D +L E
Sbjct: 6 FWDDHDKAQQLIDTTNNLKNKFDNFKQLEQSVDDLKVSAELYEE--DNDPEMLSEMTDNC 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+ +++ L +ELT LLS YD A++ I GAGGT++QDW MLLRMY RW ++ +K
Sbjct: 64 QTVDQELRSYELTMLLSEEYDSHNAILEIHPGAGGTESQDWGAMLLRMYERWADQHDFKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
+ G+EAGIKS I ++G AYG L E+G HR+VR SPF++ G R TSF+ +VM
Sbjct: 124 EFEDYQPGDEAGIKSVSIMIKGLNAYGLLRSERGVHRLVRISPFDSAGRRHTSFASVDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L ++S+ + + ++DL + R+ G GGQ++NK +AVRITH+PTG+ V +RSQL
Sbjct: 184 PEL-DDSIKIDVNDDDLRVDVFRSSGAGGQHINKTSSAVRITHLPTGIVVSSQAQRSQLQ 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+S LKAKL + +E++A +I+G+ + WG QIR+YVFHPY +VKD R+ +E
Sbjct: 243 NRQTAMSMLKAKLFQLEQEEQAKRNAEIKGEQLDIGWGSQIRSYVFHPYTMVKDHRSNYE 302
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
T + +VMDGEL+PFI +YL++K
Sbjct: 303 TGNGQAVMDGELDPFIYAYLQWK 325
>gi|335048924|ref|ZP_08541936.1| peptide chain release factor 2 [Megasphaera sp. UPII 199-6]
gi|333764707|gb|EGL42093.1| peptide chain release factor 2 [Megasphaera sp. UPII 199-6]
Length = 344
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 212/331 (64%), Gaps = 3/331 (0%)
Query: 36 ELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDA 95
+L+++ +D FW++ A+ Q T +K+++ ++ D ++L M+ D
Sbjct: 2 DLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELA--MEEKDT 59
Query: 96 GLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYV 155
L + + L +++ E+ LLSG YD+ A+++ AGAGGT+AQDW ML+RMY
Sbjct: 60 SLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLIRMYT 119
Query: 156 RWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLR 215
RW E+ Y R+++ G+EAG+KSA V+G YAYGYL EKG HR+VR SPF+A R
Sbjct: 120 RWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDAAARR 179
Query: 216 QTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTV 275
TSF+ +VMP LP++ +DV+I +++ + + RA G GGQ+VNK +AVR+TH+PTG+ V
Sbjct: 180 HTSFTAVDVMPELPDD-VDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTGIVV 238
Query: 276 RCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYK 335
+C ERSQL NK L L+AKL + EE++A +I G EWG QIR+YVFHPY
Sbjct: 239 QCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVFHPYN 298
Query: 336 LVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
LVKD RT ET + +VMDGEL+ FI+ +L+
Sbjct: 299 LVKDHRTDVETGNTQAVMDGELDKFIEGFLQ 329
>gi|269795803|ref|YP_003315258.1| peptide chain release factor 2 [Sanguibacter keddieii DSM 10542]
gi|269097988|gb|ACZ22424.1| bacterial peptide chain release factor 2 (bRF-2) [Sanguibacter
keddieii DSM 10542]
Length = 372
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 230/352 (65%), Gaps = 5/352 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + L+ +AEL +A+ WD+ AQ+ AL+ + +++ + + ++++DD
Sbjct: 20 ISAVTDPEALKIRIAELSDQASAPDLWDDTDAAQKVTTALSQAQTELDRIVNMESRIDDL 79
Query: 81 VTIVKLTEEMD-STDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAG 139
+V++ E D + D LEEA + + + L E+ LLSG +D AV+SI AGAG
Sbjct: 80 EVLVEMATEGDGADDVETLEEAQKDLDGIRRDLGDLEVRTLLSGEWDAREAVVSIRAGAG 139
Query: 140 GTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKG 199
G DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E G
Sbjct: 140 GVDAADFAEMLMRMYLRWAERHGYPTAVLDTSYAEEAGLKSATFEVKAPYAFGNLSVEAG 199
Query: 200 THRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVN 258
THR+VR SPF+ +G RQTSF+ EV+PL+ ES D V IP+ ++ + R+ G GGQ+VN
Sbjct: 200 THRLVRISPFDNQGRRQTSFAAVEVIPLI--ESTDHVDIPDNEIRVDVFRSSGPGGQSVN 257
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+THIPTG+ V E+SQ+ N+ A+ L+++LL+ + Q + K++ GD V
Sbjct: 258 TTDSAVRLTHIPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLERQAQEKAMKKEMAGD-V 316
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
KA WG Q+R+YV PY++VKD+RT HE + +V DGE++ FI++ ++++ S
Sbjct: 317 KASWGDQMRSYVLQPYQMVKDLRTEHEVGNTSAVFDGEIDDFIEAGIRWRRS 368
>gi|307243612|ref|ZP_07525755.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
17678]
gi|306492981|gb|EFM64991.1| peptide chain release factor 2 [Peptostreptococcus stomatis DSM
17678]
Length = 348
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 223/344 (64%), Gaps = 4/344 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ LE ++E A+ FW++ ++ + LQ ++ ++ + T ++D +++L
Sbjct: 6 LKGLESRKVDIEKLMAEQDFWEDTDKSNKILQENKTIEVRLTQYSQLITSIEDINILLEL 65
Query: 87 TEEMDSTDAGLLEEAASI--IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQ 144
+EE DST+ E + I +K+ + LD+ + L SG YD A++S+ +G GG DAQ
Sbjct: 66 SEE-DSTEEDQEIENSIIDQVKDARENLDRMTMEMLFSGQYDSNNAILSVNSGTGGLDAQ 124
Query: 145 DWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIV 204
DWA MLLRMY+RW E YK ++++ + EAGIK+A I V+G+ AYG+L EKG HR+V
Sbjct: 125 DWAQMLLRMYIRWSESSGYKVKLIDINSDPEAGIKTATILVQGQNAYGHLKSEKGVHRLV 184
Query: 205 RQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAV 264
R SPF++ G R TSF+ +V+P L E+ + V+I + DL+I R+ G GGQ+VN ++AV
Sbjct: 185 RISPFDSSGKRHTSFASIDVVPELNED-IKVEINQTDLKIDTYRSSGAGGQHVNTTDSAV 243
Query: 265 RITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQ 324
RITHIPTG+ V+C ERSQ +NK A+ L AKL+ + EE+ I+ ++G + WG
Sbjct: 244 RITHIPTGIVVQCQNERSQHSNKDIAMKLLMAKLIQLKEEENKERIEDLQGKYSQITWGS 303
Query: 325 QIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
QIR+YVF PYKLVKD RT E +++ +VMDG+L+ F+ YLK K
Sbjct: 304 QIRSYVFQPYKLVKDHRTNEENANVDAVMDGKLDNFMFEYLKQK 347
>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|359149446|ref|ZP_09182456.1| peptide chain release factor 2 [Streptomyces sp. S4]
gi|421740172|ref|ZP_16178444.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|406691412|gb|EKC95161.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
Length = 371
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 236/363 (65%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L E+A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRLRAEIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ ++++DD + +L E D DA EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKTEALRSRLDDLGVLFELAEAED--DADTRAEAESELASVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 QAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEEEMGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|404419999|ref|ZP_11001748.1| peptide chain release factor 2 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403660566|gb|EJZ15129.1| peptide chain release factor 2 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 372
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 224/340 (65%), Gaps = 3/340 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-E 88
L + + LE +A+D + WD+++ AQ+ L+ + ++ + D + ++DD + +L E
Sbjct: 28 LRQRIDMLEQQASDPNLWDDQSRAQKVTSELSHAQSEMRRVQDLRQRVDDLPVLFELAFE 87
Query: 89 EMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
E + + EA + + +L + ++ E+ LLSG YD+ AV++I +GAGG DA DWA+
Sbjct: 88 EAGAEGDDAVAEADAELVKLREEIETLEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAE 147
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
ML+RMY+RW EK Y V + S EEAGIKSA V +AYG LS E+GTHR+VR SP
Sbjct: 148 MLMRMYIRWAEKHDYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISP 207
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
F+ + RQTSF+ EV+P++ E + + IPE DL + R+ G GGQ+VN ++AVR+TH
Sbjct: 208 FDNQSRRQTSFADVEVLPVV-ETTDHIDIPEGDLRVDVYRSSGPGGQSVNTTDSAVRLTH 266
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
IPTG+ V C E+SQL NK+ A+ L+A+LL ++ +E+ ++GD + WG Q+R+
Sbjct: 267 IPTGIVVTCQNEKSQLQNKVAAMRVLQARLLERKRQEERAEMDALKGDG-GSSWGNQMRS 325
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
YV HPY++VKD+RT +E + +V+DG+++ F+++ ++++
Sbjct: 326 YVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFLEAGIRWR 365
>gi|449967856|ref|ZP_21812771.1| peptide chain release factor 2 [Streptococcus mutans 15VF2]
gi|449168149|gb|EMB70984.1| peptide chain release factor 2 [Streptococcus mutans 15VF2]
Length = 325
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG+ AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGQNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L + +++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DNTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|326790220|ref|YP_004308041.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
gi|326540984|gb|ADZ82843.1| peptide chain release factor 2 [Clostridium lentocellum DSM 5427]
Length = 369
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/333 (42%), Positives = 207/333 (62%), Gaps = 3/333 (0%)
Query: 35 AELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTD 94
+ELE + D++FW++ AQ LQ L + KD+I +D + ++++ E D
Sbjct: 35 SELEEMSMDNAFWNDIERAQSVLQQLKNYKDRIEKYDKLCGSFEDILVLIEMANE--DED 92
Query: 95 AGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMY 154
GL EEA + K + + LL YD+ A++ + GAGGT+A DW ML RMY
Sbjct: 93 IGLAEEAKACAKTFEEDYSEMLTATLLDQEYDRNNAILELHPGAGGTEACDWVAMLFRMY 152
Query: 155 VRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGL 214
RW +++ +K V++ G+EAGIKS I++ G AYGYL EKG HR+VR SPF++ G
Sbjct: 153 TRWADRKGFKVEVLDYLDGDEAGIKSVTIQISGENAYGYLKSEKGIHRLVRISPFDSSGR 212
Query: 215 RQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 274
R TSF+ +V+P + +E +++ I EDL I R+ G GGQ+VN ++AVRITH+PT +
Sbjct: 213 RHTSFASCDVIPEITDE-IEIDIRPEDLRIDTYRSTGAGGQHVNTTDSAVRITHLPTNIV 271
Query: 275 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 334
V+C ERSQ+ N+ +A+ LKAKL +E+R I IRG+ WG QIR+YVFHPY
Sbjct: 272 VQCQNERSQIQNRERAMQMLKAKLYEKEQEERMDRIDGIRGEKKDIAWGSQIRSYVFHPY 331
Query: 335 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+VKD RT ET + +VMDG+++ F+ +YL +
Sbjct: 332 NMVKDHRTSEETGNTSAVMDGDIDRFMNAYLGW 364
>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 366
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 235/368 (63%), Gaps = 8/368 (2%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ D+E+ SD + I L L + ELE+ AAD + WD+ AQ+ L+ +
Sbjct: 4 DVASDIESLSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQS 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEM-DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ + + ++DD + +L EE + T+ E A +L +A++ E+ +LSG
Sbjct: 64 TLKKVRALRQRVDDLPVMYELAEEEGEGTELADDERA-----DLRQAIESMEVQTMLSGE 118
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD+ AV++I +GAGG DA DWA+ML+RMY+RW EK+ +K +V + S EEAGIKSA +
Sbjct: 119 YDERDAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQ 178
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
V Y YG LS E+GTHR+VR SPF+ + RQTSF+ EV+P++ E++ + IP+ D+ +
Sbjct: 179 VSDPYMYGTLSVEQGTHRLVRISPFDNQARRQTSFAEVEVLPVV-EKTDHIDIPDSDVRV 237
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
R+ G GGQ+VN ++AVRITHIPTG+ V C E+SQ+ N+ A++ L+++LL +
Sbjct: 238 DVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRLLERKRQ 297
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+ +E+ + G +A WG Q+R+YV HPY++VKD+RT +E D V+DG+++ F+++
Sbjct: 298 EEQAEMDAL-GAGGEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLEAG 356
Query: 365 LKYKYSMS 372
++++ + S
Sbjct: 357 IRWRMAES 364
>gi|452911608|ref|ZP_21960275.1| Peptide chain release factor 2 [Kocuria palustris PEL]
gi|452833245|gb|EME36059.1| Peptide chain release factor 2 [Kocuria palustris PEL]
Length = 373
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 227/341 (66%), Gaps = 8/341 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L E+A+L +AA WD+ AQ+ L+ + ++ L +++D +V+L EE
Sbjct: 29 LRAEVAQLNEQAAAPDLWDDVENAQKLTSQLSHKQSQLKRLDALGERIEDIEVMVQLAEE 88
Query: 90 MDSTDAGLL--EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
D D L EE S+ K+L Q E+T LLSG YD+ AV++I AGAGG DA D+A
Sbjct: 89 EDDADTLALAEEELVSVRKDLA----QLEITTLLSGEYDERDAVVTIRAGAGGVDAADFA 144
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
++L+RMY+RW E+ Y T+V++ S EEAG+KSA EV+ YA+G LS E GTHR+VR S
Sbjct: 145 EILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKTPYAFGTLSVEAGTHRLVRIS 204
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+PL+ E ++IPE +L+I R+ G GGQ+VN ++AVR+T
Sbjct: 205 PFDNQGRRQTSFAAVEVIPLI-ESDDTIEIPENELKIDVFRSSGPGGQSVNTTDSAVRMT 263
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V E+SQ+ N+ AL L++++L+ +++ ++ K++ GD VKA WG Q+R
Sbjct: 264 HIPTGIVVSMQNEKSQIQNRAAALRVLQSRILLQRKQEADAKKKEMAGD-VKASWGDQMR 322
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+YV +PY++VKD+RT HE + SV DG+++ F+ + ++++
Sbjct: 323 SYVLNPYQMVKDLRTNHEEGNPSSVFDGQIDDFVDAGIRWR 363
>gi|15902709|ref|NP_358259.1| peptide chain release factor 2 [Streptococcus pneumoniae R6]
gi|116516272|ref|YP_816152.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
gi|182683675|ref|YP_001835422.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
gi|303255830|ref|ZP_07341871.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
gi|15458252|gb|AAK99469.1| Peptide chain release factor 2 [Streptococcus pneumoniae R6]
gi|116076848|gb|ABJ54568.1| peptide chain release factor 2 [Streptococcus pneumoniae D39]
gi|182629009|gb|ACB89957.1| peptide chain release factor 2 [Streptococcus pneumoniae CGSP14]
gi|302597214|gb|EFL64319.1| peptide chain release factor 2 [Streptococcus pneumoniae BS455]
Length = 329
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 216/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E K + FW++ AQ+ Q L ++K+ N + D+ ++ E D
Sbjct: 1 MENKMTEPDFWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DES 56
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
+ +E + + EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R
Sbjct: 57 VHDELVAQLAELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R
Sbjct: 117 YGNAKGFKVEVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF+ EVMP L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V+
Sbjct: 177 TSFTSVEVMPEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQ 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT E + + VMDG+L+ FI +YLK++ S
Sbjct: 296 VKDHRTSFEVAQVDKVMDGDLDGFIDAYLKWRIS 329
>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 369
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 229/366 (62%), Gaps = 6/366 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M D Y ++ + + + S L ++ L+ L ++ D +FW+++ AQ+ L+
Sbjct: 1 MIDLYEAKQAITGMDAELTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQ 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
T +K K + + K ++DD + +L EE + D E ++ + + F+L L
Sbjct: 61 TILKRKRSRYDEVKEELDDVSVMYELAEEGEGMD-----ELEQMLGAFQEKFEDFKLEML 115
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSG YD A+IS+ GAGGT++ DWA MLLRMY RW E + YK + ++ G+ AGIKS
Sbjct: 116 LSGEYDSNNAIISLHPGAGGTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKS 175
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A + +EG AYGYL E+G HR+VR SPF++ G R TSF+ +V P + ++S++++I +
Sbjct: 176 ATLLIEGINAYGYLKTERGVHRLVRISPFDSSGRRHTSFASLDVTPEV-DDSVEIEINPD 234
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
D+ + R+ G GGQ+VNK +A+RITH+PTGV V+C ERSQ N+ A++ LK+KL+
Sbjct: 235 DIRVDTYRSSGAGGQHVNKTSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVE 294
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I +++ +++ + GD + WG QIR+YVFHPY +VKD RTG E +I +VMDG+L+ F
Sbjct: 295 IMAQEQKEKLEDVVGDYSQIAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRF 354
Query: 361 IKSYLK 366
+ + L+
Sbjct: 355 MNAELR 360
>gi|228993892|ref|ZP_04153795.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
gi|228765843|gb|EEM14494.1| Peptide chain release factor 2 [Bacillus pseudomycoides DSM 12442]
Length = 327
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 214/329 (65%), Gaps = 7/329 (2%)
Query: 44 SSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEA 101
+ FWD++ AQ + +K+ ++ F+ ++D+ +++T E+ + D L EE
Sbjct: 4 AGFWDDQQGAQTVINEANALKE---MVGKFR-QLDETFENLEVTHELLKEEYDEDLHEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S +K L + ++++EL LLS PYDK A++ + GAGGT++QDW MLLRMY RW EK+
Sbjct: 60 ESEVKSLVREMNEYELQLLLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 GFKVDTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P ++ +++++ EDL+I RA G GGQ++N ++AVRITH PT V C ER
Sbjct: 180 CEVVPEFNDD-IEIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHTPTNTVVTCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKL E++ +++ +IRG+ + WG QIR+YVFHPY LVKD R
Sbjct: 239 SQIKNREHAMKMLKAKLYQKKLEEQQAQLNEIRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T E ++ +VMDGE++PFI +YL+ + S
Sbjct: 299 TNTEVGNVQAVMDGEIDPFIDAYLRSRIS 327
>gi|406993330|gb|EKE12494.1| hypothetical protein ACD_13C00193G0004 [uncultured bacterium]
Length = 349
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 222/351 (63%), Gaps = 17/351 (4%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R+E+++ L ++++ +LE + +D + W + A+ Q L+D+K ++ +TD
Sbjct: 11 RLEKLKEVIKLPLKQEKIKQLEAEVSDPNLWSDPDNARNVTQELSDLKKELESITD---- 66
Query: 77 MDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
+ + + I+K E D ++A E K L + EL LSG YD + A++SI A
Sbjct: 67 LSETLEILKQVE--DESEAAKAE----------KELAELELMSYLSGDYDSKNALVSIHA 114
Query: 137 GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSG 196
G GGT+A DW ML RMY+R+ E++ + T ++ + GEEAGIKS +V GRYAYGYL
Sbjct: 115 GQGGTEAMDWTGMLYRMYLRFCERRGWSTEGIDYTAGEEAGIKSVTFKVVGRYAYGYLKN 174
Query: 197 EKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQ 255
E GTHR+VRQSPFNA LRQTSF+ EVMP L E M D+QI +EDL+ F AGG GGQ
Sbjct: 175 EAGTHRLVRQSPFNADKLRQTSFALVEVMPELEETDMKDIQIKDEDLDWQFIHAGGHGGQ 234
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NVNKV TAVR+THIP+G+ + + ER Q N+ AL L+ KL + +E K+++G
Sbjct: 235 NVNKVATAVRLTHIPSGIVITASTERFQEQNRKIALDLLRGKLWLRQQEIAKGLKKELKG 294
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
D A WG QIR+YV HPYK+VKD+RT ET + +V++GE++ FI LK
Sbjct: 295 DYRPASWGTQIRSYVLHPYKMVKDLRTEVETGNTEAVLNGEIDEFIDEELK 345
>gi|441206141|ref|ZP_20972932.1| peptide chain release factor 2 [Mycobacterium smegmatis MKD8]
gi|440628689|gb|ELQ90485.1| peptide chain release factor 2 [Mycobacterium smegmatis MKD8]
Length = 368
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 220/339 (64%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + +LE A+D + WD++ AQ+ L+ ++++ + + ++DD + +L E
Sbjct: 28 LRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGLRQRLDDLPVLYELAAE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D + EA + + +L + ++ E+ LLSG YD+ AV++I +GAGG DA DWA+M
Sbjct: 88 AGGPDE--VAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEM 145
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW EK Y + + S EEAGIKSA V +AYG LS E+GTHR+VR SPF
Sbjct: 146 LMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPF 205
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ + RQTSF+ EV+P++ E + + IPE DL + R+ G GGQ+VN ++AVR+THI
Sbjct: 206 DNQSRRQTSFADVEVLPVV-ETTDHIDIPENDLRVDVYRSSGPGGQSVNTTDSAVRLTHI 264
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQL NK+ A+ L+AKLL + +E+ ++GD + WG Q+R+Y
Sbjct: 265 PTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAELDALKGDG-GSSWGNQMRSY 323
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V HPY++VKD+RT +E + SV+DG+++ F+++ ++++
Sbjct: 324 VLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWR 362
>gi|422869151|ref|ZP_16915671.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
Length = 327
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 207/329 (62%), Gaps = 3/329 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ FWDN AQ+ + +K+K ++D+ + +L +E D + EE
Sbjct: 2 GEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQE--EYDTEIQEEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I L + L +EL+ LL+ PYD A+I + GAGGT++QDW MLLRMY RW E
Sbjct: 60 EERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ G+EAGIKS + ++G AYGYL EKG HR+VR PF++ R TSF
Sbjct: 120 GFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++++++ I +DL+I RA G GGQ++NK E+AVRITHIPTG V +R
Sbjct: 180 VDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++A E +RG+ ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +ET ++ +VMDG+L+ FI +YLK + S
Sbjct: 299 TNYETGNVQAVMDGDLDGFIDAYLKQRLS 327
>gi|206901574|ref|YP_002251123.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
gi|206740677|gb|ACI19735.1| peptide chain release factor 2 [Dictyoglomus thermophilum H-6-12]
Length = 330
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/255 (54%), Positives = 192/255 (75%), Gaps = 2/255 (0%)
Query: 111 ALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEK 170
+L +FE+ +L P+D+ A++S+ AG GGTDAQDW ++LLRMY+RW E++ Y+ ++++
Sbjct: 68 SLKEFEIEMILQDPHDEANAILSLHAGTGGTDAQDWTEILLRMYIRWAERKGYQVKILDI 127
Query: 171 SLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPE 230
S GEEAGIKSA + +EG AYGYL GEKG HR+VR SPF+A R TSF+ EV+P LPE
Sbjct: 128 SPGEEAGIKSATLLIEGDKAYGYLKGEKGVHRLVRISPFDANHRRHTSFALVEVIPELPE 187
Query: 231 ESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKA 290
+++++ EDL+I RAGG GGQ+VNKVE+AVRITHIPTG+ V+C ERSQ ANK A
Sbjct: 188 STIEIR--PEDLKIETFRAGGAGGQHVNKVESAVRITHIPTGIVVQCQNERSQHANKEMA 245
Query: 291 LSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIV 350
L LKA+L + E++R +I ++G+ + WG QIR+YVFHPY LVKD RTG E ++
Sbjct: 246 LRVLKARLEELEEKKRREKIASLKGEVQEISWGNQIRSYVFHPYTLVKDHRTGLEIGNVQ 305
Query: 351 SVMDGELEPFIKSYL 365
+V+DGE++PFI++YL
Sbjct: 306 AVIDGEIDPFIEAYL 320
>gi|417905767|ref|ZP_12549566.1| peptide chain release factor 2 [Staphylococcus capitis VCU116]
gi|341598661|gb|EGS41161.1| peptide chain release factor 2 [Staphylococcus capitis VCU116]
Length = 333
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 208/325 (64%), Gaps = 2/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW+++ +AQE + +K +N D ++DD +L +E D + EE
Sbjct: 3 ADPNFWNDQNKAQEIIDKNNALKSIVNGYHDLANEVDDMSATRELLQE--EYDEDMKEEL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ + + +DQFEL LL GP+D A++ + GAGGT++QDWA MLLRMY R+ E+
Sbjct: 61 ENTVIQFKDKMDQFELQLLLDGPHDANNAILELHPGAGGTESQDWASMLLRMYQRYCEQN 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ V+ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 121 GFNVETVDYLPGDEAGVKSVKLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL + +++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLDEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET + +VMDG++ PFI++YL+
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLR 325
>gi|374297349|ref|YP_005047540.1| peptide chain release factor 2 [Clostridium clariflavum DSM 19732]
gi|359826843|gb|AEV69616.1| peptide chain release factor 2 [Clostridium clariflavum DSM 19732]
Length = 328
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 152/327 (46%), Positives = 212/327 (64%), Gaps = 3/327 (0%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ +Q+ LQ + +KDK+ + +D T+ +L M+ D +L E
Sbjct: 5 FWNDVENSQKILQRIKTLKDKVERYNKLTQEWEDVRTLCELG--MEEEDDSVLSEVEESF 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K+ K + L LL+GPYDK A++++ AGAGGT+AQDW MLLRM+ RW EK+ +
Sbjct: 63 KKFKKDFETLRLETLLTGPYDKNNAILTLHAGAGGTEAQDWVQMLLRMFTRWAEKKGFTV 122
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++++ GEEAGIKS I V G AYGYL EKG HR+VR SPF+A G R TSF+ +VM
Sbjct: 123 KILDILDGEEAGIKSVTINVIGENAYGYLKSEKGIHRLVRISPFDASGRRHTSFASCDVM 182
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L ++ +++ I EDL+I RA G GGQ++NK E+AVRITHIPTG+ V C ERSQ
Sbjct: 183 PELSDD-IEININPEDLKIDTYRASGAGGQHINKTESAVRITHIPTGIVVSCQTERSQFQ 241
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
NK A+ LKAKLL + E ++ +I++++G ++ WG QIR+YVF PY LVKD RT +E
Sbjct: 242 NKDTAMKMLKAKLLELKEREKKEKIEELKGVQMEIAWGSQIRSYVFCPYTLVKDHRTNYE 301
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYSMS 372
++ VMDG+L+ FI SYL + S S
Sbjct: 302 QINVDDVMDGDLDGFINSYLIHCNSAS 328
>gi|418576816|ref|ZP_13140948.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379324481|gb|EHY91627.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 335
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 210/333 (63%), Gaps = 18/333 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
D +FWDN+ +AQ DV DK N L K+ ++ T+ E+MD+T A LLEE
Sbjct: 3 TDPTFWDNQEKAQ-------DVIDKNNAL---KSVVNAYRTLESELEDMDTTRALLLEED 52
Query: 102 ASIIKE--------LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
+K+ LDQFEL LL GPYD A++ + GAGGT++QDW +MLLRM
Sbjct: 53 DETMKQDLEQSVQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRM 112
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y R+ E++ + + + G+EAG+KS + V+G AYGYL EKG HR+VR SPF++ G
Sbjct: 113 YQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSG 172
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF+ +V+P +++ I +D+ + RA G GGQ++NK E+A+RITH PTG+
Sbjct: 173 RRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGI 232
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHP
Sbjct: 233 VVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHP 292
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y +VKD RT ET + +VMDG++ PFI+++L+
Sbjct: 293 YAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLR 325
>gi|257125766|ref|YP_003163880.1| peptide chain release factor 2 [Leptotrichia buccalis C-1013-b]
gi|257049705|gb|ACV38889.1| bacterial peptide chain release factor 2 (bRF- 2) [Leptotrichia
buccalis C-1013-b]
Length = 364
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 223/368 (60%), Gaps = 5/368 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D + ++K E +EEIR L+ L+ E+ LE + + FW N +QE L+ ++
Sbjct: 2 DLFEIKKQNEINEINIEEIRRHLDLENLKIEIENLEKQTFEPDFW-NAENSQEILKNISA 60
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
K + + +D TI++ E D++ LE+ A K+L +D F+ LL
Sbjct: 61 KKKMLEEYDNLNGLFEDVSTIIEFIEMGDNSFENELEQKA---KKLENEIDNFKTKLLLD 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
YD A+++I +GAGGT+A DWA+ML RMY RW + +K V++ GEEAGIKS
Sbjct: 118 EEYDTNNAILTINSGAGGTEACDWAEMLYRMYDRWANRHNFKVEVLDSLAGEEAGIKSIT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ ++G YAYGYL GEKG HR+VR SPF++ R TSF+ V P + E+ +++ I EDL
Sbjct: 178 LNIKGSYAYGYLKGEKGVHRLVRISPFDSNARRHTSFAAVNVTPEI-EDDVEINIRTEDL 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+I RA G GGQ+VN ++AVRITHIPT V C ERSQL N+ A+ LK+KL +
Sbjct: 237 KIDTYRASGAGGQHVNTTDSAVRITHIPTNTVVTCQNERSQLKNRETAMKILKSKLFELE 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
E+R E+ +++G K EWG QIR+YVF PYK+VKD RT E ++ VMDG+++ FI
Sbjct: 297 LEKREKEMAELKGTESKIEWGSQIRSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFIN 356
Query: 363 SYLKYKYS 370
YLKY S
Sbjct: 357 EYLKYSKS 364
>gi|386044811|ref|YP_005963616.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
gi|404411751|ref|YP_006697339.1| peptide chain release factor 2 [Listeria monocytogenes SLCC5850]
gi|345538045|gb|AEO07485.1| peptide chain release factor 2 [Listeria monocytogenes 10403S]
gi|404231577|emb|CBY52981.1| peptide chain release factor 2 [Listeria monocytogenes SLCC5850]
Length = 338
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 216/337 (64%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNVYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + +FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
>gi|238923127|ref|YP_002936640.1| peptide chain release factor 2 in translation [Eubacterium rectale
ATCC 33656]
gi|238874799|gb|ACR74506.1| peptide chain release factor 2 in translation [Eubacterium rectale
ATCC 33656]
Length = 330
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 211/336 (62%), Gaps = 19/336 (5%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ ++Q ++ L +KD + K + +D T++++ G
Sbjct: 1 MEAPD--FWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEM---------GYE 49
Query: 99 EEAASIIKELNKALDQFELT-------QLLSGPYDKEGAVISITAGAGGTDAQDWADMLL 151
E S+I E+ + LD FE T LLSG YDK A++ + AGAGGT++ DWA ML
Sbjct: 50 ENDESLIPEIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLF 109
Query: 152 RMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNA 211
RMY +W +K+ + V++ G+EAGIKS +V G AYGYL EKG HR+VR SPFNA
Sbjct: 110 RMYSKWADKKGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNA 169
Query: 212 KGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPT 271
G RQTSF +VMP + EE +D+++ +ED+ I R+ G GGQ++NK +A+RITH P+
Sbjct: 170 AGKRQTSFVSCDVMPDI-EEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPS 228
Query: 272 GVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVF 331
G+ V+C ERSQ NK KA+ LKAKL ++ +E+ A++ IRG+ + WG QIR+YV
Sbjct: 229 GIVVQCQNERSQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVL 288
Query: 332 HPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
PY +VKD RT ET + +V+DG ++ FI YLK+
Sbjct: 289 QPYTMVKDHRTDVETGNADAVLDGNIDIFINGYLKW 324
>gi|406576986|ref|ZP_11052607.1| peptide chain release factor 2 [Streptococcus sp. GMD6S]
gi|404460450|gb|EKA06713.1| peptide chain release factor 2 [Streptococcus sp. GMD6S]
Length = 325
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDKMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDCAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|333445914|ref|ZP_08480856.1| peptide chain release factor 2 [Leuconostoc inhae KCTC 3774]
Length = 380
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 232/357 (64%), Gaps = 4/357 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + RA+ L+ L +E+A+ E + +S FWD+ +AQ+ ++ +K++ + + +
Sbjct: 15 ENIARFRATLDLEALTEEIADFENRMTESGFWDDNVKAQKIIEENNVLKNRRDSFLNLTS 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAA-SIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ ++ ++++ E D TD+ ++ E SI+K L K ++ + L QLL+ PYD A++ +
Sbjct: 75 QAEEIDLLIEMLSE-DVTDSEMMSELEESIVKAL-KDIETYNLEQLLTEPYDANNAILEV 132
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
G+GGT++ DW L RMY RW ++ ++ V++ G+EAGI SA I++ G A+G+L
Sbjct: 133 HPGSGGTESTDWGANLYRMYTRWAQQHGFQVDVLDYHAGDEAGIDSATIKITGHNAFGFL 192
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
EKG HR VR SPF++ G R TSF +VMP L ++++D++I ++D+++ R+GG GG
Sbjct: 193 RSEKGVHRFVRISPFDSAGRRHTSFVSVDVMPEL-DDTIDIEIRDDDVKMDVFRSGGAGG 251
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
QNVNKV T VR+TH PTG+ V T ER+Q N+ A+ LK KL + E++ +E +
Sbjct: 252 QNVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKGKLYQLELEKQEAERAALT 311
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
GD ++ WG QIR+YV HPY++VKD RT +ET+ V+DG+L+PFI +YL+++ S+
Sbjct: 312 GDKLENGWGSQIRSYVLHPYQMVKDHRTDYETNQPQQVLDGDLDPFINAYLQWQLSL 368
>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
Length = 368
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 235/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLGVLFEMAEEEDDPDT--RAEAESELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L +
Sbjct: 183 QSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG ++R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNRVRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|406884797|gb|EKD32138.1| hypothetical protein ACD_77C00170G0004 [uncultured bacterium]
Length = 311
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 142/309 (45%), Positives = 204/309 (66%), Gaps = 5/309 (1%)
Query: 57 LQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFE 116
L+ ++ +K + ++ + ++D + ++ ++E DS DA E KEL K LD E
Sbjct: 3 LKKVSILKFWVKGFSEIEKSLEDLIVLLDFSKEDDSVDA----EVNEHYKELVKKLDNLE 58
Query: 117 LTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEA 176
L +L D GA++ I +GAGGT++ DW+ ML+RMYVRWGE+ YK + + G+EA
Sbjct: 59 LRSMLGSEGDNLGAILKINSGAGGTESNDWSSMLMRMYVRWGERNGYKVHIYDLLEGDEA 118
Query: 177 GIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQ 236
GIKS +E EG YAYGYL E G HR+VR SPFN++G RQT+FS V P + ++++ ++
Sbjct: 119 GIKSVTVEFEGDYAYGYLKAENGVHRLVRISPFNSQGKRQTTFSSVYVYPAV-DDTITIE 177
Query: 237 IPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKA 296
I DLE R+GG GGQNVNKVET VR+ H+PTG+TV TE RSQL N+ A+ LK+
Sbjct: 178 INPGDLEWDTFRSGGAGGQNVNKVETGVRVRHLPTGITVENTESRSQLDNRANAMRILKS 237
Query: 297 KLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGE 356
L + +R + ++ G +K EWG QIR+YV HPYK+VKD+RTG ETSD +V+DG+
Sbjct: 238 HLYELELRKRKEKEAELEGKKLKIEWGSQIRSYVLHPYKMVKDLRTGCETSDTQAVLDGD 297
Query: 357 LEPFIKSYL 365
+ F++S+L
Sbjct: 298 INEFMRSFL 306
>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399986457|ref|YP_006566806.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|166225108|sp|A0QU58.1|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399231018|gb|AFP38511.1| Peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
Length = 368
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 221/339 (65%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + +LE A+D + WD++ AQ+ L+ ++++ + + ++DD + +L E
Sbjct: 28 LRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQNELRRVEGLRQRLDDLPVLYELAAE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D + EA + + +L + ++ E+ LLSG YD+ AV++I +GAGG DA DWA+M
Sbjct: 88 AGGPDE--VAEADAELAKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEM 145
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW EK Y + + S EEAGIKSA V +AYG LS E+GTHR+VR SPF
Sbjct: 146 LMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPF 205
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ + RQTSF+ EV+P++ E + ++IPE D+ + R+ G GGQ+VN ++AVR+THI
Sbjct: 206 DNQSRRQTSFADVEVLPVV-ETTDHIEIPENDIRVDVYRSSGPGGQSVNTTDSAVRLTHI 264
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQL NK+ A+ L+AKLL + +E+ ++GD + WG Q+R+Y
Sbjct: 265 PTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAELDALKGDG-GSSWGNQMRSY 323
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V HPY++VKD+RT +E + SV+DG+++ F+++ ++++
Sbjct: 324 VLHPYQMVKDLRTEYEVGNPASVLDGDIDGFLEAGIRWR 362
>gi|449889457|ref|ZP_21787557.1| peptide chain release factor 2 [Streptococcus mutans SA41]
gi|449250072|gb|EMC48154.1| peptide chain release factor 2 [Streptococcus mutans SA41]
Length = 325
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDTLKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
Length = 368
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 226/346 (65%), Gaps = 12/346 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L ++ ++A LE +AA S WD+ AQ+ L+ ++ ++ + ++DD + +L
Sbjct: 26 LDRMRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKTEALRARIDDLGVLFEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA L EA + + + KALD+ E+ LLSG YD+ A+++I A AGG DA D+
Sbjct: 86 AEAED--DADTLAEAETELAAVRKALDEMEVRTLLSGEYDEREALVNIRAEAGGVDASDF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ L RMY+RW E+ Y T + E S EEAGIKS V+ YAYG LS E+GTHR+VR
Sbjct: 144 AERLQRMYMRWAERHGYATEIYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+G EV+P++ E+S V+I E +L + RA G GGQ VN ++AVRI
Sbjct: 204 SPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDETELRVDVYRASGPGGQGVNTTDSAVRI 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE----W 322
THIPTG+ V C ERSQ+ NK A++ L+AKLL E+R E +Q R DA+K + W
Sbjct: 263 THIPTGIVVSCQNERSQIQNKASAMNVLQAKLL----ERRRQE-EQARMDALKGDGGNSW 317
Query: 323 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
G Q+R+YV HPY++VKD+RT E + +V+DGE++ F+++ ++++
Sbjct: 318 GNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAAIRWR 363
>gi|270307933|ref|YP_003329991.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
gi|270153825|gb|ACZ61663.1| peptide chain release factor 2 [Dehalococcoides sp. VS]
Length = 357
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 212/336 (63%), Gaps = 5/336 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
E E+ ELE +A FW ++ AQ ++ L K L + +++D + L+ E
Sbjct: 20 ELEITELENASASPDFWQDQQNAQRVMKKLAANKRTSELWRGLERRVNDLTELAVLSYE- 78
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L E I L L+ E+ SG YD A++++ AGAGG ++QDWA ML
Sbjct: 79 ---DPSLSNEIEHEISGLTAELNSLEVGLAFSGQYDNRNALLTVHAGAGGVESQDWAGML 135
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRM++RW EK+ + ++++S GEEAG+KSA ++++G YAYG+L E G HR++R SPF+
Sbjct: 136 LRMFMRWAEKKGFGMEILDQSPGEEAGVKSATLQIDGEYAYGFLKSEHGVHRLIRLSPFD 195
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R TSF+ E+MP E+S+D+ I ED++I R+ G GGQNV KV TAVRITHIP
Sbjct: 196 ADHARHTSFALVEIMPE-AEDSVDIDIKPEDIKIEMFRSSGPGGQNVQKVSTAVRITHIP 254
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
+G+ V ERSQ N+ A+ L +KLL + +RA E +++G+ + AEWG QIR+YV
Sbjct: 255 SGIVVASQTERSQHQNREIAMRILASKLLAVEIAKRAEERAKLKGERISAEWGNQIRSYV 314
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
HPYK+VKD RT +E + +V++GEL+ FI +YL+
Sbjct: 315 LHPYKMVKDHRTDYEVGNAETVLEGELDGFINAYLR 350
>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9719]
gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9635]
gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9719]
gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9635]
Length = 352
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 214/340 (62%), Gaps = 2/340 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L+ E + E E A+ +FWDN+ +AQ+ + +K +N + ++DD L
Sbjct: 9 LENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDL 68
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E D + E+ + +D++EL LL GP+D A++ + GAGGT++QDW
Sbjct: 69 LQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDW 126
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML RMY R+ EK+ +K V+ G+EAGIKS + ++G AYGYL EKG HR+VR
Sbjct: 127 ANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRI 186
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ G R TSF+ +V+P + ++++I +D+ + RA G GGQ++NK E+A+RI
Sbjct: 187 SPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRI 246
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH P+G+ V ERSQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QI
Sbjct: 247 THHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQI 306
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
R+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 307 RSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 346
>gi|284029674|ref|YP_003379605.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
gi|283808967|gb|ADB30806.1| peptide chain release factor 2 [Kribbella flavida DSM 17836]
Length = 373
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 228/342 (66%), Gaps = 4/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L L +E+A+L + A WD++A AQ+ L+ ++ + +T+ ++++DD +++L
Sbjct: 26 LDALRREIADLGEQVAAPDLWDDQANAQKVTSRLSSLQADVERVTNLRSRIDDLGVMIEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+ E DA L E+ I L K++ E+ LLSG YD+ A+++I +GAGG DA D+
Sbjct: 86 SRE--ENDADSLAESEKEIAALAKSIQSLEVRTLLSGEYDEREALVTIRSGAGGVDAADF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML RMY+RW E+ Y T V + S EEAG+KS V+ YAYG LS E GTHR+VR
Sbjct: 144 AEMLQRMYLRWAERHGYPTEVYDTSYAEEAGLKSTTFGVKAPYAYGTLSVESGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P+L E++ ++ +PEE+L I R+ G GGQ+VN ++AVRI
Sbjct: 204 SPFDNQGRRQTSFAAVEVVPVL-EQTDEIDVPEEELRIDVYRSSGPGGQSVNTTDSAVRI 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG V C E+SQL NK A+ LKAKLL + + + ++I +RGD V+ WG Q+
Sbjct: 263 THLPTGTVVSCQNEKSQLQNKASAMVILKAKLLALKKAEERAQIDALRGD-VQGSWGDQM 321
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV HPY++VKD+RT +E+ + V DGE++ F+++ ++++
Sbjct: 322 RSYVLHPYQMVKDLRTQYESGNTSGVFDGEIDDFVEAGIRWR 363
>gi|421895161|ref|ZP_16325636.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
gi|385271930|emb|CCG91008.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
Length = 332
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 208/327 (63%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ + ++K K + + +++ +L E D D + E
Sbjct: 2 AEPNFWDNQEQAQIVINENNELKQKYDNFKNLTDHVENLEVTAELLEMEDDPD--VQSEF 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S + K L + L LL+G YD A+I I GAGGT++QDW MLLRMY RW E+
Sbjct: 60 ESELAATAKLLQDYRLGLLLNGKYDANNAIIEIHPGAGGTESQDWGSMLLRMYTRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++K ++ + GE AGI S + + G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 120 QFKVQIEDYQAGEVAGISSVTMRIVGHNAYGYLRSEKGVHRLVRLSPFDSAGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L ++S++V I ++DL + R+ G GGQ++NK +AVRITH+PTG+ V ER
Sbjct: 180 VDVMPEL-DDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGIVVASQAER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ A+S LKAKL + E+++A E +I G ++ WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLQNRATAMSMLKAKLFELEEQKKAEEKAKIEGIQLEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
+ ET+++ VMDG+L+ FI +YL++K
Sbjct: 299 SNFETANVQGVMDGDLDDFINAYLQWK 325
>gi|227832559|ref|YP_002834266.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
700975]
gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
700975]
gi|254790912|sp|C3PES4.1|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
700975]
Length = 368
Score = 290 bits (741), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 229/363 (63%), Gaps = 15/363 (4%)
Query: 17 RVEEIRASAGLQQLEK---------ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R+EE+ SA L +EK + ELE +A D S WD+ AQ+ L+ + K+
Sbjct: 8 RLEEL--SATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKL 65
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
L + +++D + +L EE D E + +KEL A++ E+T +LSG YD+
Sbjct: 66 RKLNSLRGRIEDLPVMSELAEE--EGDEASQELVETELKELGAAIESLEVTTMLSGEYDE 123
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
AVI+I +GAGG DA DWA+ML+RMY RW EK +K V + S EEAGIKSA V G
Sbjct: 124 REAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHG 183
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
Y YG LS E+G HR+VR SPF+ +G RQTSF+ EV+P++ E++ +++P+ ++ +
Sbjct: 184 EYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDSIEVPDSEVRVDVY 242
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+ G GGQ+VN ++AVR+THIPTG+ V C E+SQ+ NK A+ L+AKLL ++
Sbjct: 243 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEER 302
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
+E+ + G A WG Q+R+YV HPY++VKD+RT +E D V+DG+++ F++S +++
Sbjct: 303 AELDAL-GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLESGIRW 361
Query: 368 KYS 370
+ +
Sbjct: 362 RMA 364
>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
Length = 367
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 230/344 (66%), Gaps = 5/344 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+++L + + ELE +A+D W+++ AQ+ L+ + ++ + + ++++DD + +L
Sbjct: 25 VEELRRRIDELEHQASDPELWNDQEHAQQVTSQLSHAQSELRRVEELRSRLDDMAVLYEL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE + +A + +A + +L ++ E+ +LSG YD+ A+++I AGAGG DA DW
Sbjct: 85 AEE-EGPEA--VADAHAERAQLRTDIEAMEVKTMLSGEYDQRDALVNIRAGAGGVDAADW 141
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW EK+ Y V + S EEAGIKSA V+ Y+YG LS E GTHR+VR
Sbjct: 142 AEMLMRMYIRWAEKRGYGVEVYDTSYAEEAGIKSATFAVKAPYSYGTLSIEMGTHRLVRI 201
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E + + I E D+ + R+ G GGQ+VN ++AVR+
Sbjct: 202 SPFDNQGRRQTSFAEVEVLPVV-ETTDHIDIDENDVRVDVYRSSGPGGQSVNTTDSAVRL 260
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V C E+SQL NK+ A+ L+AKLL ++ +E+ ++GD + WG Q+
Sbjct: 261 THVPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRQEERAEMDALKGDG-GSSWGNQM 319
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
R+YV HPY++VKD+RT +E ++ +V+DGE++ FI++ ++++ S
Sbjct: 320 RSYVLHPYQMVKDLRTEYEVNNPSAVLDGEIDGFIEAGIRWRMS 363
>gi|406837850|ref|ZP_11097444.1| peptide Chain Release Factor 2 [Lactobacillus vini DSM 20605]
Length = 333
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 216/332 (65%), Gaps = 8/332 (2%)
Query: 42 ADSSFWDNRAEAQETL---QALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
AD +FW+++ AQ + AL D LL D +DD +V++ +E + TD L
Sbjct: 2 ADPNFWNDQKAAQLVIDENNALKTKFDNFKLLNDV---IDDLKVLVEMLKE-EPTDQELQ 57
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E S + + L ++L LL+G YD A++ I GAGGT++QDW MLLRMY RW
Sbjct: 58 HELDSKLNKAQHKLQNYQLELLLNGKYDAHNALLEIHPGAGGTESQDWGSMLLRMYDRWA 117
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
++ ++K V++ GEEAGIKS ++++G+ AYGYL EKG HR+VR SPF+A G R TS
Sbjct: 118 QQHQFKIEVLDYLAGEEAGIKSVTLQIKGKNAYGYLRSEKGVHRLVRISPFDAAGRRHTS 177
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F+ VMP L +++++V++ ED+++ R+ G GGQ++NK +AVR+ HIPTG+ V
Sbjct: 178 FASVNVMPEL-DDNVEVELRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVVSSQ 236
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
+RSQ N+ A S L+++L + E++ + QI+G ++ WG QIR+YVFHPY LVK
Sbjct: 237 AQRSQFQNRATAESMLRSRLYELKLEEQEKKKAQIQGKQLEIGWGSQIRSYVFHPYSLVK 296
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
D RTG+ET +I +VMDG+L+ FI +YL+Y+ S
Sbjct: 297 DHRTGYETGNIQAVMDGDLDGFINAYLQYQLS 328
>gi|73663271|ref|YP_302052.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495786|dbj|BAE19107.1| peptide chain release factor 2 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 334
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 210/333 (63%), Gaps = 18/333 (5%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
D +FWDN+ +AQ DV DK N L K+ ++ T+ E+MD+T A LLEE
Sbjct: 2 TDPTFWDNQEKAQ-------DVIDKNNAL---KSVVNAYRTLESELEDMDTTRALLLEED 51
Query: 102 ASIIKE--------LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRM 153
+K+ LDQFEL LL GPYD A++ + GAGGT++QDW +MLLRM
Sbjct: 52 DETMKQDLEQSVQDFKNELDQFELQLLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRM 111
Query: 154 YVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKG 213
Y R+ E++ + + + G+EAG+KS + V+G AYGYL EKG HR+VR SPF++ G
Sbjct: 112 YQRYCEQKGFNVEIADYLPGDEAGVKSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSG 171
Query: 214 LRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGV 273
R TSF+ +V+P +++ I +D+ + RA G GGQ++NK E+A+RITH PTG+
Sbjct: 172 RRHTSFASCDVIPQFNNTEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGI 231
Query: 274 TVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHP 333
V ERSQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHP
Sbjct: 232 VVNNQNERSQIKNREAAMKTLKSKLYQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHP 291
Query: 334 YKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
Y +VKD RT ET + +VMDG++ PFI+++L+
Sbjct: 292 YAMVKDHRTNEETGKVDAVMDGDIGPFIEAFLR 324
>gi|422758592|ref|ZP_16812354.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322411427|gb|EFY02335.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 327
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 214/329 (65%), Gaps = 5/329 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+S FW++ AQ+T Q L ++K + + D+ +++ EE DS L EA
Sbjct: 2 TESDFWNDNIAAQKTSQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL--EA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ ++ L + L +E+T LLS PYD A++ I G+GGT+AQDWADML RMY R+G +
Sbjct: 60 S--LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAK 117
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R TSF
Sbjct: 118 GFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVS 177
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R
Sbjct: 178 VEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY +VKD R
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHR 296
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYKYS 370
T +E + + VMDG++E FI +YLK++ S
Sbjct: 297 TNYEVAQVDKVMDGDIEGFIDAYLKWRMS 325
>gi|359426085|ref|ZP_09217172.1| peptide chain release factor 2 [Gordonia amarae NBRC 15530]
gi|358238562|dbj|GAB06754.1| peptide chain release factor 2 [Gordonia amarae NBRC 15530]
Length = 371
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/362 (39%), Positives = 227/362 (62%), Gaps = 3/362 (0%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E+ + + L++L + + ELEM+A+D W+N+ AQ+ L+ + +
Sbjct: 8 DLESLDATLTTVEKVVDLEELRRRIDELEMQASDPELWNNQDHAQKVTSELSHAQAEFRK 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTD-AGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
+++ + +++D + +L E + D L +A L ++ E+ +L+G YD
Sbjct: 68 VSELRQRLEDMPVLYELAESEEGEDRTAALADADEERAALRTDIEAMEVKTMLAGEYDAR 127
Query: 129 GAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGR 188
A+++I +GAGG DA DWA ML+RMY+RW EK Y V + S EEAGIKSA V+
Sbjct: 128 DALVNIRSGAGGVDAADWAQMLMRMYIRWAEKHHYGVEVYDTSYAEEAGIKSATFAVKAP 187
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
Y YG LS E+GTHR+VR SPF+ + RQTSF+ EV+P++ E + + I E DL + R
Sbjct: 188 YMYGTLSVEQGTHRLVRISPFDNQSRRQTSFAEVEVLPVV-ETTDHIDIAETDLRVDVYR 246
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+ G GGQ+VN ++AVR+THIPTG+ V C E+SQL NK A+ L+AKLL ++ +
Sbjct: 247 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLERKRQEERA 306
Query: 309 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
E+ ++GD + WG Q+R+YV HPY++VKD+RT E ++ +V+DGE++PFI++ ++++
Sbjct: 307 ELDALKGDG-GSSWGNQMRSYVLHPYQMVKDLRTNVENNNPSAVLDGEIDPFIEAGIRWR 365
Query: 369 YS 370
+
Sbjct: 366 MA 367
>gi|290580262|ref|YP_003484654.1| peptide chain release factor [Streptococcus mutans NN2025]
gi|387785911|ref|YP_006251007.1| putative peptide chain release factor [Streptococcus mutans LJ23]
gi|397649960|ref|YP_006490487.1| peptide chain release factor 2 [Streptococcus mutans GS-5]
gi|449894966|ref|ZP_21789427.1| peptide chain release factor 2 [Streptococcus mutans SF12]
gi|449910252|ref|ZP_21794624.1| peptide chain release factor 2 [Streptococcus mutans OMZ175]
gi|449931693|ref|ZP_21802483.1| peptide chain release factor 2 [Streptococcus mutans 3SN1]
gi|449936437|ref|ZP_21803984.1| peptide chain release factor 2 [Streptococcus mutans 2ST1]
gi|449960144|ref|ZP_21810525.1| peptide chain release factor 2 [Streptococcus mutans 4VF1]
gi|449984028|ref|ZP_21818802.1| peptide chain release factor 2 [Streptococcus mutans NFSM2]
gi|449992187|ref|ZP_21822227.1| peptide chain release factor 2 [Streptococcus mutans NVAB]
gi|449997982|ref|ZP_21824184.1| peptide chain release factor 2 [Streptococcus mutans A9]
gi|450013472|ref|ZP_21829963.1| peptide chain release factor 2 [Streptococcus mutans A19]
gi|450025871|ref|ZP_21831850.1| peptide chain release factor 2 [Streptococcus mutans U138]
gi|450045965|ref|ZP_21838694.1| peptide chain release factor 2 [Streptococcus mutans N34]
gi|450052875|ref|ZP_21841466.1| peptide chain release factor 2 [Streptococcus mutans NFSM1]
gi|450062878|ref|ZP_21844615.1| peptide chain release factor 2 [Streptococcus mutans NLML5]
gi|450107041|ref|ZP_21860813.1| peptide chain release factor 2 [Streptococcus mutans SF14]
gi|450118080|ref|ZP_21865149.1| peptide chain release factor 2 [Streptococcus mutans ST1]
gi|450120231|ref|ZP_21865589.1| peptide chain release factor 2 [Streptococcus mutans ST6]
gi|450126073|ref|ZP_21867973.1| peptide chain release factor 2 [Streptococcus mutans U2A]
gi|450139602|ref|ZP_21872585.1| peptide chain release factor 2 [Streptococcus mutans NLML1]
gi|450144137|ref|ZP_21873859.1| peptide chain release factor 2 [Streptococcus mutans 1ID3]
gi|450155523|ref|ZP_21878282.1| peptide chain release factor 2 [Streptococcus mutans 21]
gi|450159370|ref|ZP_21879401.1| peptide chain release factor 2 [Streptococcus mutans 66-2A]
gi|450175110|ref|ZP_21884960.1| peptide chain release factor 2 [Streptococcus mutans SM1]
gi|450182505|ref|ZP_21888351.1| peptide chain release factor 2 [Streptococcus mutans 24]
gi|254997161|dbj|BAH87762.1| putative peptide chain release factor [Streptococcus mutans NN2025]
gi|379132312|dbj|BAL69064.1| putative peptide chain release factor [Streptococcus mutans LJ23]
gi|392603529|gb|AFM81693.1| peptide chain release factor 2 [Streptococcus mutans GS-5]
gi|449151077|gb|EMB54821.1| peptide chain release factor 2 [Streptococcus mutans 1ID3]
gi|449162256|gb|EMB65404.1| peptide chain release factor 2 [Streptococcus mutans 3SN1]
gi|449165575|gb|EMB68571.1| peptide chain release factor 2 [Streptococcus mutans 2ST1]
gi|449167881|gb|EMB70731.1| peptide chain release factor 2 [Streptococcus mutans 4VF1]
gi|449180068|gb|EMB82248.1| peptide chain release factor 2 [Streptococcus mutans NVAB]
gi|449180637|gb|EMB82783.1| peptide chain release factor 2 [Streptococcus mutans NFSM2]
gi|449181325|gb|EMB83432.1| peptide chain release factor 2 [Streptococcus mutans A9]
gi|449187416|gb|EMB89204.1| peptide chain release factor 2 [Streptococcus mutans A19]
gi|449190416|gb|EMB91991.1| peptide chain release factor 2 [Streptococcus mutans U138]
gi|449199431|gb|EMC00496.1| peptide chain release factor 2 [Streptococcus mutans N34]
gi|449199720|gb|EMC00774.1| peptide chain release factor 2 [Streptococcus mutans NFSM1]
gi|449205289|gb|EMC06043.1| peptide chain release factor 2 [Streptococcus mutans NLML5]
gi|449222469|gb|EMC22195.1| peptide chain release factor 2 [Streptococcus mutans SF14]
gi|449225487|gb|EMC25084.1| peptide chain release factor 2 [Streptococcus mutans ST1]
gi|449230477|gb|EMC29734.1| peptide chain release factor 2 [Streptococcus mutans ST6]
gi|449231818|gb|EMC30974.1| peptide chain release factor 2 [Streptococcus mutans U2A]
gi|449232714|gb|EMC31812.1| peptide chain release factor 2 [Streptococcus mutans NLML1]
gi|449237128|gb|EMC36013.1| peptide chain release factor 2 [Streptococcus mutans 21]
gi|449241302|gb|EMC39938.1| peptide chain release factor 2 [Streptococcus mutans 66-2A]
gi|449244711|gb|EMC43075.1| peptide chain release factor 2 [Streptococcus mutans 24]
gi|449247391|gb|EMC45673.1| peptide chain release factor 2 [Streptococcus mutans SM1]
gi|449255133|gb|EMC53005.1| peptide chain release factor 2 [Streptococcus mutans SF12]
gi|449259956|gb|EMC57468.1| peptide chain release factor 2 [Streptococcus mutans OMZ175]
Length = 325
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|450034832|ref|ZP_21834656.1| peptide chain release factor 2 [Streptococcus mutans M21]
gi|449196123|gb|EMB97418.1| peptide chain release factor 2 [Streptococcus mutans M21]
Length = 325
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNTKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|23099950|ref|NP_693416.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
gi|22778181|dbj|BAC14451.1| peptide chain release factor RF-2 [Oceanobacillus iheyensis HTE831]
Length = 327
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 208/325 (64%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD SFWD++ +AQ +Q +K+ +N + +++ +L +E D L +
Sbjct: 2 ADPSFWDDQNKAQSVIQETNGIKEYVNGFETIEENLENLEVSYELVKE--ENDQELFADL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +++ ++QFEL LLS PYD A++ + GAGGT++QDWA MLLRMY RW E++
Sbjct: 60 DAELQQFITDVNQFELQLLLSEPYDANNAILELHPGAGGTESQDWASMLLRMYQRWAEER 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 120 NFKVETLDYLPGDEAGLKSVTLIIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V P + ++ +D+ I ED+++ RA G GGQ+VN ++AVRITH+PT + V C ER
Sbjct: 180 CDVTPEMSDD-VDIDIRTEDIKVDTYRASGAGGQHVNTTDSAVRITHLPTNIIVTCQNER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL + E++ E+ IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQIKNREAAMKMLKSKLYQLEVEKQRQELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET + +VMDG++ PFI +YL+
Sbjct: 299 TDKETGNTQAVMDGDINPFIDAYLR 323
>gi|418475196|ref|ZP_13044622.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
gi|371544193|gb|EHN72927.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
Length = 352
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 227/351 (64%), Gaps = 4/351 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E I A L +L ++A LE +AA S WD+ AQ+ L+ ++ ++ + ++
Sbjct: 1 MESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQAEVRKAEALRGRI 60
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD + ++ EE D D EA S + + KALD+ E+ LLSG YD A+++I A
Sbjct: 61 DDLGVLFEMAEEEDDPDT--RAEAESELAAVRKALDEMEVRTLLSGEYDAREALVNIRAE 118
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+ L RMY+RW E+ YKT V E S EEAGIKS V+ YAYG LS E
Sbjct: 119 AGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAVQSPYAYGTLSVE 178
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L + R+ G GGQ V
Sbjct: 179 QGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVDVYRSSGPGGQGV 237
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++ +++ ++GD
Sbjct: 238 NTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQEEQAKMDALKGDG 297
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ ++++
Sbjct: 298 GNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGIRWR 347
>gi|357413121|ref|YP_004924857.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
Length = 368
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 234/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S + I A L L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DISEELKSLSSTMGSIEAVLDLDALRVDIAALEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L E D DA L EA S ++ + KALD+ E+ LLSG Y
Sbjct: 65 EVRKTETLRGRIDDLEVLFELAE--DEGDADALAEAESELESVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT V E + EEAGIKS V
Sbjct: 123 DAREALVTIRAEAGGVDAADFAEKLQRMYLRWAERHNYKTEVYETAYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
E YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ V+I E +L +
Sbjct: 183 EVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHVEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT E + +V +GE++ F+++ +
Sbjct: 302 EQAKMNALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEFEMGNPEAVFNGEIDGFVEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|284802947|ref|YP_003414812.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
gi|284996088|ref|YP_003417856.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
gi|386054698|ref|YP_005972256.1| peptide chain release factor 2 [Listeria monocytogenes Finland
1998]
gi|284058509|gb|ADB69450.1| peptide chain release factor 2 [Listeria monocytogenes 08-5578]
gi|284061555|gb|ADB72494.1| peptide chain release factor 2 [Listeria monocytogenes 08-5923]
gi|346647349|gb|AEO39974.1| peptide chain release factor 2 [Listeria monocytogenes Finland
1998]
Length = 338
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 215/337 (63%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
SK141]
gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
SK141]
Length = 367
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/339 (42%), Positives = 215/339 (63%), Gaps = 7/339 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + ELE +A D S WD+ A AQ+ L+ + K+ L + +++D + +L EE
Sbjct: 28 LAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLESLRGRLEDMPVMYELAEE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L ++ + L A++ E+T +LSG YD AVI+I +GAGG DA DWA+M
Sbjct: 88 --EGDTSLADDE---LDSLESAIESLEVTTMLSGEYDPREAVINIRSGAGGVDAADWAEM 142
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY RW EK +K V + S EEAGIKSA V G Y YG LS E+G HR+VR SPF
Sbjct: 143 LMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRISPF 202
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+P++ E++ + IP+ D+ + R+ G GGQ+VN ++AVR+THI
Sbjct: 203 DNQGRRQTSFAEVEVLPVV-EQTDHIDIPDNDVRVDVYRSSGPGGQSVNTTDSAVRLTHI 261
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R+Y
Sbjct: 262 PTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEEQAELDAL-GAGGNASWGNQMRSY 320
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V HPY++VKD+RT E D V+DG+++ F++S ++++
Sbjct: 321 VLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLESGIRWR 359
>gi|329116145|ref|ZP_08244862.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
gi|326906550|gb|EGE53464.1| peptide chain release factor 2 [Streptococcus parauberis NCFD 2020]
Length = 327
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/327 (42%), Positives = 215/327 (65%), Gaps = 5/327 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW++ AQ+T Q L ++K K + D + ++ +++ +E DS L EE
Sbjct: 2 SEPDFWNDNIAAQKTSQELNELKVKFDTYHDMQNLSEETELYLEMLDEDDS----LQEEL 57
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +++L++ L +E+T LLS PYD A++ I G+GGT+AQDWADML RMY R+G +
Sbjct: 58 EASLEKLDQILSSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAK 117
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R TSF+
Sbjct: 118 GFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTS 177
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R
Sbjct: 178 VEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDR 236
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
+Q N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD R
Sbjct: 237 TQYGNRDRAMKMLQAKLYQLEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHR 296
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T E + + VMDG ++ FI +YLK++
Sbjct: 297 TSFEVAQVDKVMDGFIDGFIDAYLKWR 323
>gi|319935038|ref|ZP_08009481.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
gi|319810056|gb|EFW06425.1| peptide chain release factor 2 [Coprobacillus sp. 29_1]
Length = 371
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/365 (39%), Positives = 229/365 (62%), Gaps = 5/365 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
+ Y ++ +E A + E+ S ++ L++E+ L ++ D FW+N+ +A++ L +
Sbjct: 2 ELYEVKNGLERARLLLNELFVSIDIEGLKREIEGLTVQTLDEHFWNNQEQAKKIYNQLNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKEL-NKALDQFELTQLL 121
+K + D + ++D +E + TD +EA EL K L+ FE T L
Sbjct: 62 MKKTTDTYDDLVSSLNDLDETYDYVKETEDTD---FKEALDQDYELFEKHLNDFEKTLLF 118
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
SG YD A++ I GAGGT++QDWA ML+RMY R+G+K+ +K V++ GEEAG+KS
Sbjct: 119 SGEYDHHNAIVEIHPGAGGTESQDWAAMLMRMYQRYGDKKDFKVEVLDYLDGEEAGLKSV 178
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
+ G AYG+L EKG HR+VR SPF++ R TSF+ +VMP + ++++I + D
Sbjct: 179 TLRFIGYNAYGHLKAEKGVHRLVRISPFDSSKRRHTSFASVDVMPEF-DNDIEIEIDQND 237
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
L I RA G GGQ++NK ++A+RITHIPT + V C +RSQ+ N+ +AL LK+KL +
Sbjct: 238 LRIDTYRASGAGGQHINKTDSAIRITHIPTHIVVTCQSQRSQIQNREQALIMLKSKLYQV 297
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
E++AS++ I+G+ EWG QIR+YV HPY +VKD R+G+E+++ +++DG+L+ I
Sbjct: 298 MLEEQASKLSDIKGEQKAIEWGSQIRSYVLHPYSMVKDNRSGYESNNPKAILDGDLDDCI 357
Query: 362 KSYLK 366
+YLK
Sbjct: 358 YAYLK 362
>gi|169630559|ref|YP_001704208.1| peptide chain release factor 2 [Mycobacterium abscessus ATCC 19977]
gi|365871419|ref|ZP_09410960.1| peptide chain release factor 2 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|397680121|ref|YP_006521656.1| peptide chain release factor 2 [Mycobacterium massiliense str. GO
06]
gi|414582846|ref|ZP_11439986.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-1215]
gi|418247354|ref|ZP_12873740.1| peptide chain release factor 2 [Mycobacterium abscessus 47J26]
gi|418421605|ref|ZP_12994778.1| peptide chain release factor 2 [Mycobacterium abscessus subsp.
bolletii BD]
gi|419709229|ref|ZP_14236697.1| peptide chain release factor 2 [Mycobacterium abscessus M93]
gi|420864991|ref|ZP_15328380.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0303]
gi|420869781|ref|ZP_15333163.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0726-RA]
gi|420874226|ref|ZP_15337602.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0726-RB]
gi|420879297|ref|ZP_15342664.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0304]
gi|420886077|ref|ZP_15349437.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0421]
gi|420891332|ref|ZP_15354679.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0422]
gi|420896640|ref|ZP_15359979.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0708]
gi|420900397|ref|ZP_15363728.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0817]
gi|420906263|ref|ZP_15369581.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-1212]
gi|420911108|ref|ZP_15374420.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0125-R]
gi|420917564|ref|ZP_15380867.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0125-S]
gi|420922727|ref|ZP_15386023.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0728-S]
gi|420928389|ref|ZP_15391669.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-1108]
gi|420932713|ref|ZP_15395988.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-151-0930]
gi|420936046|ref|ZP_15399315.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-152-0914]
gi|420942974|ref|ZP_15406230.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-153-0915]
gi|420948665|ref|ZP_15411915.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-154-0310]
gi|420953138|ref|ZP_15416380.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-0626]
gi|420957312|ref|ZP_15420547.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-0107]
gi|420962979|ref|ZP_15426203.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-1231]
gi|420967996|ref|ZP_15431200.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0810-R]
gi|420974564|ref|ZP_15437755.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0921]
gi|420978729|ref|ZP_15441906.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0212]
gi|420984113|ref|ZP_15447280.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0728-R]
gi|420993260|ref|ZP_15456406.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-0307]
gi|420999033|ref|ZP_15462168.1| peptide chain release factor 2 [Mycobacterium massiliense
2B-0912-R]
gi|421003556|ref|ZP_15466678.1| peptide chain release factor 2 [Mycobacterium massiliense
2B-0912-S]
gi|421008640|ref|ZP_15471750.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0119-R]
gi|421014162|ref|ZP_15477239.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0122-R]
gi|421019027|ref|ZP_15482084.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0122-S]
gi|421025197|ref|ZP_15488241.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0731]
gi|421029899|ref|ZP_15492930.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0930-R]
gi|421035741|ref|ZP_15498759.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0930-S]
gi|421040259|ref|ZP_15503267.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0116-R]
gi|421044579|ref|ZP_15507579.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0116-S]
gi|421050503|ref|ZP_15513497.1| peptide chain release factor 2 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|238688912|sp|B1MEU8.1|RF2_MYCA9 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|169242526|emb|CAM63554.1| Peptide chain release factor 2 (PrfB) [Mycobacterium abscessus]
gi|353451847|gb|EHC00241.1| peptide chain release factor 2 [Mycobacterium abscessus 47J26]
gi|363995222|gb|EHM16440.1| peptide chain release factor 2 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|363995521|gb|EHM16738.1| peptide chain release factor 2 [Mycobacterium abscessus subsp.
bolletii BD]
gi|382943110|gb|EIC67424.1| peptide chain release factor 2 [Mycobacterium abscessus M93]
gi|392063707|gb|EIT89556.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0303]
gi|392065701|gb|EIT91549.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0726-RB]
gi|392069251|gb|EIT95098.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0726-RA]
gi|392078592|gb|EIU04419.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0422]
gi|392081840|gb|EIU07666.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0421]
gi|392084206|gb|EIU10031.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0304]
gi|392095952|gb|EIU21747.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0708]
gi|392097758|gb|EIU23552.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0817]
gi|392104167|gb|EIU29953.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-1212]
gi|392110455|gb|EIU36225.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0125-S]
gi|392113102|gb|EIU38871.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0125-R]
gi|392117998|gb|EIU43766.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-1215]
gi|392127380|gb|EIU53130.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0728-S]
gi|392129507|gb|EIU55254.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-1108]
gi|392137472|gb|EIU63209.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-151-0930]
gi|392141561|gb|EIU67286.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-152-0914]
gi|392148071|gb|EIU73789.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-153-0915]
gi|392152051|gb|EIU77758.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-0626]
gi|392155695|gb|EIU81401.1| peptide chain release factor 2 [Mycobacterium massiliense
1S-154-0310]
gi|392162447|gb|EIU88137.1| peptide chain release factor 2 [Mycobacterium abscessus 5S-0921]
gi|392163007|gb|EIU88696.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0212]
gi|392169109|gb|EIU94787.1| peptide chain release factor 2 [Mycobacterium abscessus 6G-0728-R]
gi|392177815|gb|EIV03468.1| peptide chain release factor 2 [Mycobacterium massiliense
2B-0912-R]
gi|392179362|gb|EIV05014.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-0307]
gi|392192259|gb|EIV17883.1| peptide chain release factor 2 [Mycobacterium massiliense
2B-0912-S]
gi|392196788|gb|EIV22404.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0119-R]
gi|392199851|gb|EIV25459.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0122-R]
gi|392207657|gb|EIV33234.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0122-S]
gi|392211994|gb|EIV37560.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0731]
gi|392221187|gb|EIV46710.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0116-R]
gi|392223119|gb|EIV48641.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0930-R]
gi|392224236|gb|EIV49757.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0930-S]
gi|392234032|gb|EIV59530.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0116-S]
gi|392239106|gb|EIV64599.1| peptide chain release factor 2 [Mycobacterium massiliense CCUG
48898]
gi|392245892|gb|EIV71369.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-1231]
gi|392250503|gb|EIV75977.1| peptide chain release factor 2 [Mycobacterium abscessus 3A-0810-R]
gi|392251143|gb|EIV76616.1| peptide chain release factor 2 [Mycobacterium massiliense 2B-0107]
gi|395458386|gb|AFN64049.1| Peptide chain release factor 2 [Mycobacterium massiliense str. GO
06]
Length = 367
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 222/339 (65%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + LE AAD + WD++A Q+ L+ + ++ + + ++++DD + +L EE
Sbjct: 28 LRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEELRSRLDDLPVLYELAEE 87
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
S D ++ EA + +L + ++ E+ LLSG YD+ AV++I +GAGG DA DWA+M
Sbjct: 88 --SEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEM 145
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW E +Y V + S EEAGIKSA V +AYG LS E+GTHR+VR SPF
Sbjct: 146 LMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPF 205
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ + RQTSF+ EV+P++ E + + IPE DL + R+ G GGQ+VN ++AVR+THI
Sbjct: 206 DNQSRRQTSFADVEVLPVV-ETTDHIDIPEGDLRVDVYRSSGPGGQSVNTTDSAVRLTHI 264
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQL NK+ A+ L+A+LL ++ +E+ ++GD + WG Q+R+Y
Sbjct: 265 PTGIVVTCQNEKSQLQNKVAAMRVLQARLLERKRQEERAEMDALKGDG-GSSWGTQMRSY 323
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V PY++VKD+RT +E + +V+DG+++ FI++ ++++
Sbjct: 324 VLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 362
>gi|85057585|ref|YP_456501.1| peptide chain release factor 2 [Aster yellows witches'-broom
phytoplasma AYWB]
gi|84789690|gb|ABC65422.1| bacterial peptide chain release factor 2 [Aster yellows
witches'-broom phytoplasma AYWB]
Length = 370
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 216/362 (59%), Gaps = 6/362 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y + + ++ +++++ + L++ + + +L FW N +A Q D++
Sbjct: 4 YEINQILQNLYQNLQDLKQALNLKKTNQTIEKLNCAMQKEDFWQNPKKAVTISQQFNDLQ 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
DK N L + D T L E + A L EE +K L K++ F++ L+ P
Sbjct: 64 DKKNTLEILEQNYLDLETFFNLNESPNEASALLEEE----LKNLTKSVFDFKIKIFLNQP 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++ GAGGT++QDW +ML RMY ++ +K+ +KT +++ LGE AG+KSA +
Sbjct: 120 YDINNAILLFHPGAGGTESQDWCEMLFRMYQKYAQKKNFKTEILDYQLGEGAGVKSATLL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL EKG HR+VR SPF++ R TSF +V+P + EE + + + EDL+I
Sbjct: 180 IKGTYAYGYLKAEKGVHRLVRISPFDSNSKRHTSFVACDVLPEINEE-IKINLKTEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA-E 303
R+ G GGQ+VN ++AVRITH+PTG+ V C ERSQ+ NK KAL LK KL +A +
Sbjct: 239 DVFRSSGAGGQHVNTTDSAVRITHLPTGLVVGCQNERSQIKNKEKALQMLKTKLFQLASK 298
Query: 304 EQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS 363
+Q+ K+ + D + WG QIR+YVFHPYK+VKD RT E + VMDG ++ FI
Sbjct: 299 QQKEQNAKKFQSDQKENGWGSQIRSYVFHPYKMVKDHRTNQEIFQLEQVMDGNIDEFING 358
Query: 364 YL 365
YL
Sbjct: 359 YL 360
>gi|78044242|ref|YP_359035.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996357|gb|ABB15256.1| peptide chain release factor 2 [Carboxydothermus hydrogenoformans
Z-2901]
Length = 371
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/362 (46%), Positives = 239/362 (66%), Gaps = 6/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAE-LEMKAADSSFWDNRAEAQETLQALTDVKD 65
L++ + S ++EE+R S + +KEL E L K + FWDN EAQ+TL+ L +KD
Sbjct: 5 LKRSLAEISPKIEEMRVSLDIPG-KKELVEKLTAKTYEPDFWDNYTEAQKTLKELNRLKD 63
Query: 66 KINLLTDF-KTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
I + K + + V + L EE + A ++ A K+L + L + E+ LLSGP
Sbjct: 64 DIEKYEELLKAQEELTVLLQLLEEEENEELAVEAQDKA---KKLMEKLHRMEIELLLSGP 120
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YDK A++S+ AGAGGT+AQDW +ML RMY RW E + YK ++++ LGEEAG+KS
Sbjct: 121 YDKNSAIVSLHAGAGGTEAQDWVEMLYRMYTRWAEDKGYKVELIDRLLGEEAGLKSVTFS 180
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
VEG AYGYL E+G HR++R SPF+ G R TSF+ +V+P + E+ ++++ EE+L+I
Sbjct: 181 VEGFGAYGYLKAERGVHRLIRISPFDFSGRRHTSFASVDVLPEVAEDIPEIELKEEELKI 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
R+GG GGQ+VNK E+AVRITH+PTG+TV C ERSQL N+ A LKAKLL + +
Sbjct: 241 ETFRSGGAGGQHVNKTESAVRITHLPTGITVVCQNERSQLMNRALAEKLLKAKLLDLEMK 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ E+ ++RG+ + WG QIR YVFHPY LVKD RTG E D+ VMDGE++ FI++Y
Sbjct: 301 KKEEEMAKLRGEQKEIAWGSQIRTYVFHPYSLVKDHRTGVEVGDVQGVMDGEIDIFIEAY 360
Query: 365 LK 366
LK
Sbjct: 361 LK 362
>gi|310659612|ref|YP_003937333.1| PrfB [[Clostridium] sticklandii]
gi|308826390|emb|CBH22428.1| PrfB [[Clostridium] sticklandii]
Length = 328
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 210/325 (64%), Gaps = 5/325 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
++ FW+ +AQ+T+Q ++DK+ +++++DA + +L +E DA L +E
Sbjct: 2 SEPEFWNEVEKAQQTMQKNKVIEDKLEQFASLESELEDAFVLFELADE----DASLEKEL 57
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S + L + +D+ ++ LLSG YD A++SI AG+GG DAQDW MLLRMY R+ +
Sbjct: 58 HSALNSLEEKIDELKIATLLSGQYDMNNAIVSIHAGSGGLDAQDWTKMLLRMYDRFAQSM 117
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ EAGIKS +++EG AYGYL EKG HRIVR SPF+ G R TSF+
Sbjct: 118 GFRVIELDMIADPEAGIKSVTLKIEGANAYGYLKSEKGVHRIVRISPFDTSGKRHTSFAS 177
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P L ++S+++ I DL+I RA G GGQ+VNK E+A+RITH+PTG+ V+C +R
Sbjct: 178 VDVIPEL-DDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGIVVQCQNQR 236
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ +NK A+ L AKL+ + E + +I+ ++G+ + WG QIR+YVF PY +VKD R
Sbjct: 237 SQHSNKETAMKMLMAKLIELKELEHKDKIEDLQGEYSQISWGSQIRSYVFQPYTMVKDHR 296
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T E + SVMDG + PFI +YLK
Sbjct: 297 TNTEIGHVQSVMDGNIMPFINAYLK 321
>gi|339480212|ref|ZP_08655871.1| peptide chain release factor 2 [Leuconostoc pseudomesenteroides
KCTC 3652]
Length = 372
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/356 (39%), Positives = 227/356 (63%), Gaps = 2/356 (0%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ + R S L+ L +E+A+ E + + FWD+ +AQ+ ++ +K++ + + +
Sbjct: 15 ENITRFRNSLDLEALTEEIADYENRMTEPGFWDDNDKAQKVIEENNVLKNRRDSFLNLTS 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+++D + ++ E D D L E + I++ + +D + L QLL+ PYD AV+ I
Sbjct: 75 QVEDLEVLTEMLAE-DPEDTDLENELSEGIEKAQQDIDAYNLEQLLTEPYDANNAVLEIH 133
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G+GGT++ DW L RMY RW ++ ++ ++ G+EAGI SA I+V G AYG+L
Sbjct: 134 PGSGGTESTDWGANLYRMYTRWAQQHNFQVETLDYHAGDEAGIDSATIKVTGHNAYGFLR 193
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR VR SPF++ G R TSF +VMP L ++S++V++ ++D+++ R+GG GGQ
Sbjct: 194 SEKGVHRFVRISPFDSAGRRHTSFVSVDVMPEL-DDSIEVEVRDDDVKMDVFRSGGAGGQ 252
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
NVNKV T VR+TH PTG+ V T ER+Q N+ A+ LK+KL + E++ +E + G
Sbjct: 253 NVNKVSTGVRLTHEPTGIVVSSTVERTQYGNRDYAMRLLKSKLYQLELEKKEAERAALTG 312
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
+ ++ WG QIR+YV HPY++VKD RT +ET+ +V+DG+L+PFI +YL+++ S+
Sbjct: 313 EKMENGWGSQIRSYVLHPYQMVKDHRTNYETNQPQAVLDGDLDPFINAYLQWQLSL 368
>gi|450110979|ref|ZP_21862460.1| peptide chain release factor 2 [Streptococcus mutans SM6]
gi|449224355|gb|EMC23996.1| peptide chain release factor 2 [Streptococcus mutans SM6]
Length = 325
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/323 (45%), Positives = 213/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE ++
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLV 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMTSYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAG+KS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGVKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|291523975|emb|CBK89562.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
rectale DSM 17629]
Length = 330
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/329 (43%), Positives = 208/329 (63%), Gaps = 5/329 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ ++Q ++ L +KD + K + +D T++++ E D L+
Sbjct: 1 MEAPD--FWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYE--ENDESLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ + D + LLSG YDK A++ + AGAGGT++ DWA ML RMY +W
Sbjct: 57 PEIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWAAMLFRMYSKWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
+K+ + V++ G+EAGIKS +V G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 DKKGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + EE +D+++ +ED+ I R+ G GGQ++NK +A+RITH P+G+ V+C
Sbjct: 177 FVSCDVMPDI-EEDLDIEVKDEDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +E+ A++ IRG+ + WG QIR+YV PY +VK
Sbjct: 236 NERSQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RT ET + +V+DG ++ FI YLK+
Sbjct: 296 DHRTDVETGNADAVLDGNIDIFINGYLKW 324
>gi|374611917|ref|ZP_09684700.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
gi|373548561|gb|EHP75252.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
Length = 371
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/343 (40%), Positives = 226/343 (65%), Gaps = 3/343 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L + +LE +A+D + WD+++ AQ+ L+ + ++ + + + ++DD + ++
Sbjct: 25 VEGLRVRIEKLEHEASDPNLWDDQSRAQKVTSELSHTQGELRRVEELRQRLDDLPVLYEM 84
Query: 87 TEEMDSTDAGLLE-EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
E + + A + EA + +K+L + L+ E+ LLSG YD A+++I +GAGG DA D
Sbjct: 85 AAEEEGSGAAEAQAEADTELKKLREDLEAMEVRTLLSGEYDAREALLNIRSGAGGVDAAD 144
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
WA+ML+RMYVRW E+ Y V + S EEAGIKSA V YAYG LS E+GTHR+VR
Sbjct: 145 WAEMLMRMYVRWAEQHNYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLVR 204
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+ +G RQTSF+ EV+P+ E + + IPE D+ + R+ G GGQ+VN ++AVR
Sbjct: 205 ISPFDNQGRRQTSFAEVEVLPVT-ETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSAVR 263
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
+THIPTG+ V C E+SQL NK+ A+ L+AKLL + +E+ ++GD + WG Q
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEERAEMDALKGDG-GSSWGNQ 322
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+R+YV HPY++VKD+RT +E + +V+DG+++ F+++ ++++
Sbjct: 323 MRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365
>gi|47096102|ref|ZP_00233703.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
F6854]
gi|258611482|ref|ZP_05232771.2| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
gi|258612274|ref|ZP_05269486.2| peptide chain release factor 2 [Listeria monocytogenes F6900]
gi|293596674|ref|ZP_05263420.2| peptide chain release factor 2 [Listeria monocytogenes J2818]
gi|386048175|ref|YP_005966507.1| peptide chain release factor 2 [Listeria monocytogenes J0161]
gi|47015563|gb|EAL06495.1| peptide chain release factor 2 [Listeria monocytogenes str. 1/2a
F6854]
gi|258600468|gb|EEW13793.1| peptide chain release factor 2 [Listeria monocytogenes FSL N3-165]
gi|258610392|gb|EEW23000.1| peptide chain release factor 2 [Listeria monocytogenes F6900]
gi|293591414|gb|EFF99748.1| peptide chain release factor 2 [Listeria monocytogenes J2818]
gi|345535166|gb|AEO04607.1| peptide chain release factor 2 [Listeria monocytogenes J0161]
Length = 338
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 215/337 (63%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + +FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L + +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
>gi|420987725|ref|ZP_15450881.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0206]
gi|392182004|gb|EIV07655.1| peptide chain release factor 2 [Mycobacterium abscessus 4S-0206]
Length = 349
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 222/339 (65%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + LE AAD + WD++A Q+ L+ + ++ + + ++++DD + +L EE
Sbjct: 10 LRARIKTLEEAAADPNLWDDQARGQQVTSQLSHAQGELRRVEELRSRLDDLPVLYELAEE 69
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
S D ++ EA + +L + ++ E+ LLSG YD+ AV++I +GAGG DA DWA+M
Sbjct: 70 --SEDNSVVAEADAERVKLREDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAEM 127
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
L+RMY+RW E +Y V + S EEAGIKSA V +AYG LS E+GTHR+VR SPF
Sbjct: 128 LMRMYIRWAEAHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHRLVRISPF 187
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ + RQTSF+ EV+P++ E + + IPE DL + R+ G GGQ+VN ++AVR+THI
Sbjct: 188 DNQSRRQTSFADVEVLPVV-ETTDHIDIPEGDLRVDVYRSSGPGGQSVNTTDSAVRLTHI 246
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG+ V C E+SQL NK+ A+ L+A+LL ++ +E+ ++GD + WG Q+R+Y
Sbjct: 247 PTGIVVTCQNEKSQLQNKVAAMRVLQARLLERKRQEERAEMDALKGDG-GSSWGTQMRSY 305
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V PY++VKD+RT +E + +V+DG+++ FI++ ++++
Sbjct: 306 VLQPYQMVKDLRTEYEVGNPAAVLDGDIDGFIEAGIRWR 344
>gi|89100645|ref|ZP_01173503.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
gi|89084669|gb|EAR63812.1| peptide chain release factor 2 [Bacillus sp. NRRL B-14911]
Length = 328
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/327 (44%), Positives = 209/327 (63%), Gaps = 3/327 (0%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD++ AQ + +KD+++ D ++ +L +E +D L E A
Sbjct: 5 NFWDDQKAAQVVISESNALKDQVHEFHDLYETFENLELTYELVKE--ESDEDLQNELAEE 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
+ EL K L QFEL LLS YDK A++ + GAGGT++QDW MLLRMY RW EK+ +K
Sbjct: 63 LTELTKRLAQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFK 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF EV
Sbjct: 123 VETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEV 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP +E +++ I EDL+I RA G GGQ++N ++AVRITH+PT V V C ERSQ+
Sbjct: 183 MPEFNDE-IEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQI 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
N+ +A+ L+AKL E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 242 KNRERAMKMLQAKLYQKKIEEQEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTST 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKYKYSM 371
E+ ++ VMDG+L+PFI +YL+ + S+
Sbjct: 302 ESGNVQGVMDGDLDPFINAYLRSRLSL 328
>gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS]
gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS]
gi|123070429|sp|Q1BBL5.1|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|166225110|sp|A1UDD2.1|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
MCS]
gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
KMS]
Length = 371
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 227/342 (66%), Gaps = 7/342 (2%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + +LE +A+D + WD+++ AQ+ L+ ++++ + + + +++D + ++ E
Sbjct: 28 LRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQNELRRVEELRQRVEDLPVLYEMAAE 87
Query: 90 ---MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
D+ +AG EA + + +L ++ E+ LLSG YD+ AV++I +GAGG DA DW
Sbjct: 88 EEGQDAENAGA--EADAELAKLRVDIEAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADW 145
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW E+ Y V + S EEAGIKSA V YAYG LS E+GTHR+VR
Sbjct: 146 AEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLVRI 205
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ + RQTSF+ EV+P++ E + + +PE DL + R+ G GGQ+VN ++AVR+
Sbjct: 206 SPFDNQSRRQTSFADVEVLPVV-ETTDHIDVPETDLRVDVYRSSGPGGQSVNTTDSAVRL 264
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQL NK+ A+ L+AKLL +++ +E+ ++GD + WG Q+
Sbjct: 265 THIPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKKQEERAELDALKGDG-GSSWGNQM 323
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV HPY++VKD+RT +E + +V+DG+++ F+++ ++++
Sbjct: 324 RSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFLEAGIRWR 365
>gi|386739917|ref|YP_006213097.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 31]
gi|384476611|gb|AFH90407.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 31]
Length = 366
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 221/344 (64%), Gaps = 8/344 (2%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L + ELE +A+D + WDN AQ+ L+ V+ ++ LT + ++DD + +L
Sbjct: 26 EELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQRIDDMPVMYELA 85
Query: 88 EEM-DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE D T E A + EL ++ E+ +LSG YD AVI+I +GAGG DA DW
Sbjct: 86 EEEGDGT-----ELADEELAELTSEIESLEVKTMLSGEYDAREAVINIRSGAGGVDAADW 140
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMYVRW EK K + + S EEAGIKSA V G Y YG LS E+G HR+VR
Sbjct: 141 AEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRI 200
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E++ + IP+ ++ + R+ G GGQ+VN ++AVR+
Sbjct: 201 SPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRL 259
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+
Sbjct: 260 THIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDAL-GAGGNASWGNQM 318
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
R+YV HPY++VKD+RT +E +D V+DG+L+ F+++ ++++ +
Sbjct: 319 RSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWRMA 362
>gi|260889274|ref|ZP_05900537.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
gi|260860685|gb|EEX75185.1| peptide chain release factor 2 [Leptotrichia hofstadii F0254]
Length = 352
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 213/341 (62%), Gaps = 5/341 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L+ E+ LE K ++ FW N +QE L+A++ K + + +D TI++
Sbjct: 14 IENLKNEIDGLEKKTFEADFW-NSENSQEILKAISTNKKLLEEYSSLNGLFEDVSTIIEF 72
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D++ LE+ A ++L +D F+ LL YD A+++I +GAGGT+A DW
Sbjct: 73 IEMGDNSFENELEQKA---QDLKNEIDNFKTKLLLDEEYDMNNAILTINSGAGGTEACDW 129
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML RMY RW + +K +++ GEEAGIKS + ++G YAYGYL GEKG HR+VR
Sbjct: 130 AEMLYRMYDRWANRHDFKVEILDSLAGEEAGIKSVTLNIKGNYAYGYLKGEKGVHRLVRI 189
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF++ R TSF+ V P + E+ +++ I EDL+I RA G GGQ+VN ++AVRI
Sbjct: 190 SPFDSNARRHTSFAAVNVTPEI-EDDVEIDIRTEDLKIDTYRASGAGGQHVNTTDSAVRI 248
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPT V C ERSQL N+ A+ LK+KL + E+R E+ +++G K EWG QI
Sbjct: 249 THIPTNTVVTCQNERSQLKNRETAMKILKSKLFELELEKREKEMAELKGTESKIEWGSQI 308
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
R+YVF PYK+VKD RT E ++ VMDG+++ FI YLKY
Sbjct: 309 RSYVFQPYKMVKDHRTKAEEGNVEKVMDGDIDLFINEYLKY 349
>gi|293365065|ref|ZP_06611782.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
gi|307702226|ref|ZP_07639186.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
gi|291316515|gb|EFE56951.1| peptide chain release factor RF2 [Streptococcus oralis ATCC 35037]
gi|307624239|gb|EFO03216.1| peptide chain release factor 2 [Streptococcus oralis ATCC 35037]
Length = 325
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 212/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K+ N + D+ ++ E +S L+E+ +
Sbjct: 6 FWNDNIAAQKTSQELNELKNTYNTFRKMEELQDEVEILLDFLAEDESVHDELVEQ----L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+ + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 TELDMMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGTVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|392331070|ref|ZP_10275685.1| peptide chain release factor 2 [Streptococcus canis FSL Z3-227]
gi|391418749|gb|EIQ81561.1| peptide chain release factor 2 [Streptococcus canis FSL Z3-227]
Length = 327
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K + + D+ +++ EE DS L EA+ +
Sbjct: 6 FWNDNMAAQKTSQELNNLKSTYETFHNMQELSDETELYLEMLEEDDSVKDDL--EAS--L 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++L + L +E+T LLS PYD A++ I G+GGT+AQDWADML RMY R+G + +K
Sbjct: 62 EKLGQILTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R TSF EVM
Sbjct: 122 ETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG++E FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDIEGFIDAYLKWRMS 325
>gi|389862939|ref|YP_006365179.1| peptide chain release factor 2 [Modestobacter marinus]
gi|388485142|emb|CCH86686.1| Peptide chain release factor 2 [Modestobacter marinus]
Length = 370
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 229/350 (65%), Gaps = 9/350 (2%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + L +E+AELE KAA W++ AQ L+ ++ + + + ++++DD
Sbjct: 19 IEAVMRVDDLRREVAELEQKAAAPDLWNDVEAAQALTSRLSYLQGDLRRVEELRSRLDD- 77
Query: 81 VTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L EM + D E ++ + LD+ E+ LLSG YD A+++I + A
Sbjct: 78 ---VGLLHEMAAEEGDEATTAETERELQSIRTVLDELEVRTLLSGEYDAREALVTIRSEA 134
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ +Y T V + S EEAGIKSA V+ YAYG LS E+
Sbjct: 135 GGVDAADFAEMLMRMYLRWAERHKYPTEVYDVSYAEEAGIKSATFAVKQPYAYGTLSVEQ 194
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ V IPE ++ + R+ G GGQ+VN
Sbjct: 195 GTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHVDIPENEIRVDVFRSSGPGGQSVN 253
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+THIPTG+ V C E+SQ+ N+ AL L+A+LLV+ + ++ +E+ ++G+
Sbjct: 254 TTDSAVRMTHIPTGIVVSCQNEKSQIQNRAAALRVLQARLLVVRQAEQRAEMDALKGEG- 312
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT E+ + +V+DG+++ FI++ ++++
Sbjct: 313 -SSWGNQMRSYVLHPYQMVKDLRTETESGNPSNVLDGDIDAFIEAGIRWR 361
>gi|392400126|ref|YP_006436726.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis Cp162]
gi|390531204|gb|AFM06933.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis Cp162]
Length = 366
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 221/344 (64%), Gaps = 8/344 (2%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L + ELE +A+D + WDN AQ+ L+ V+ ++ LT + ++DD + +L
Sbjct: 26 EELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQRIDDMPVMYELA 85
Query: 88 EEM-DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE D T E A + EL ++ E+ +LSG YD AVI+I +GAGG DA DW
Sbjct: 86 EEEGDGT-----ELADEELAELTSEIESLEVKAMLSGEYDAREAVINIRSGAGGVDAADW 140
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMYVRW EK K + + S EEAGIKSA V G Y YG LS E+G HR+VR
Sbjct: 141 AEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRI 200
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E++ + IP+ ++ + R+ G GGQ+VN ++AVR+
Sbjct: 201 SPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRL 259
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+
Sbjct: 260 THIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDAL-GAGGNASWGNQM 318
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
R+YV HPY++VKD+RT +E +D V+DG+L+ F+++ ++++ +
Sbjct: 319 RSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWRMA 362
>gi|256750898|ref|ZP_05491782.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
CCSD1]
gi|256750233|gb|EEU63253.1| peptide chain release factor 2 [Thermoanaerobacter ethanolicus
CCSD1]
Length = 330
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 149/327 (45%), Positives = 218/327 (66%), Gaps = 3/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD +FW++ ++QE + ++K+ + TK +D T+++L ++ D + +E
Sbjct: 2 ADPNFWNDIKKSQELAKRQKELKELLEEYNSLVTKWEDLSTLIELG--LEEGDESITDEV 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
KEL K L+ ++ LL+G YDK A++SI AG+GGT+AQDWA+MLLRMY RW +
Sbjct: 60 DKEYKELKKKLEDLKIKTLLNGLYDKNNAILSIHAGSGGTEAQDWAEMLLRMYTRWANDK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
++ ++ GEEAGIKS + ++G +AYGYL E G HR+VR SPF+A G R TSF+
Sbjct: 120 GFEVETLDYLQGEEAGIKSVTLMIKGPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFAL 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
EV+P L + ++V+I EDL+I RA G GGQ VNK E+AVRITH+PTG+ V C ER
Sbjct: 180 VEVLPELKND-IEVEIRPEDLKIDTYRASGAGGQYVNKTESAVRITHLPTGIVVSCQSER 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LKAKLL + +++ +I+ ++G+ +A WG QIR+YVF PY LVKD R
Sbjct: 239 SQIQNRETAMKMLKAKLLDLMMKEKKEKIEDLKGEHREAAWGNQIRSYVFQPYTLVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T +E ++ +VMDGE++ FI +YLK K
Sbjct: 299 TNYEVGNVQAVMDGEIDGFINAYLKQK 325
>gi|284989796|ref|YP_003408350.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
43160]
gi|284063041|gb|ADB73979.1| peptide chain release factor 2 [Geodermatophilus obscurus DSM
43160]
Length = 370
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/350 (41%), Positives = 232/350 (66%), Gaps = 9/350 (2%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I A + +L +E+AELE +A+ W++ AQ L+ ++ + + + ++++DD
Sbjct: 19 IEAVLDVDRLRREVAELEQQASAPDLWNDVEAAQALTSKLSYLQGDLRRVEELRSRLDD- 77
Query: 81 VTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
V L EM + +D EA + L +A+D+ E+ LLSG YD A+++I + A
Sbjct: 78 ---VGLLHEMAVEESDEATAAEAERELASLRQAIDELEVRTLLSGEYDSREALVTIRSEA 134
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ RY + + S EEAGIKSA V+ YAYG LS E+
Sbjct: 135 GGVDAADFAEMLMRMYLRWAERHRYPVELYDVSYAEEAGIKSATFAVKQPYAYGTLSVEQ 194
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ V IPE ++ I R+ G GGQ+VN
Sbjct: 195 GTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHVDIPENEIRIDVFRSSGPGGQSVN 253
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVRITH+PTG+ V C E+SQ+ N+ A+ L+A+LL +E++ +E+ +RG+
Sbjct: 254 TTDSAVRITHLPTGIVVSCQNEKSQIQNRAAAMRVLQARLLARRQEEQRAEMDALRGEG- 312
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT ET + +V+DG+++PFI++ ++++
Sbjct: 313 -SSWGNQMRSYVLHPYQMVKDLRTEQETGNTSAVLDGDIDPFIEAGIRWR 361
>gi|449923869|ref|ZP_21799269.1| peptide chain release factor 2 [Streptococcus mutans 4SM1]
gi|449163584|gb|EMB66684.1| peptide chain release factor 2 [Streptococcus mutans 4SM1]
Length = 325
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/323 (45%), Positives = 212/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ AQ+T Q L ++K K + D+ + ++ EE DS G LEE +I
Sbjct: 6 FWDDNIAAQKTSQELNELKLKYETFNSMQELSDETELLQEMLEEDDSL-QGELEE--DLI 62
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
K L+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 63 K-LDKIMISYEMTLLLSEPYDANNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 DVLDYQAGDEAGIKSVALSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L ++++V I +ED+++ R+GG GGQNVNKV T VR+THIP+G+ V T +R+Q
Sbjct: 182 PEL-NDTIEVDIRDEDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPSGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
S + VMDGEL+ FI ++LK++
Sbjct: 301 VSQVDRVMDGELDGFIDAFLKWR 323
>gi|407277743|ref|ZP_11106213.1| peptide chain release factor 2 [Rhodococcus sp. P14]
Length = 374
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/352 (39%), Positives = 227/352 (64%), Gaps = 3/352 (0%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E + A + +L + + ELE +AAD W+++ AQ+ L+ + ++ + + ++++
Sbjct: 16 LETVEAVLDVDELRRRIDELEHQAADPELWNDQEHAQQVTSQLSHAQGELRRVEELRSRL 75
Query: 78 DDAVTIVKLTEEMDSTDAGL-LEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITA 136
DD + +L E + D + L +A + L ++ E+ LLSG YD+ A+++I A
Sbjct: 76 DDLPVLYELAEGEEGEDRTVALADADAERAALRTDIEAMEVRTLLSGEYDQRDALVNIRA 135
Query: 137 GAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSG 196
GAGG DA DWA+ML+RMY+RW +K Y V + S EEAGIKSA ++ Y YG LS
Sbjct: 136 GAGGVDAADWAEMLMRMYIRWADKHGYPVEVYDTSYAEEAGIKSATFAIKAPYTYGTLSV 195
Query: 197 EKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQN 256
E GTHR+VR SPF+ +G RQTSF+ EV+P++ E + + + E D+ + R+ G GGQ+
Sbjct: 196 EMGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-ETTDHIDVDENDIRVDVYRSSGPGGQS 254
Query: 257 VNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGD 316
VN ++AVR+THIPTG+ V C E+SQL NK+ A+ L+AKLL ++ +E+ ++GD
Sbjct: 255 VNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRQEERAEMDALKGD 314
Query: 317 AVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ WG Q+R+YV HPY++VKD+RT HE ++ +V+DG+++ F++ ++++
Sbjct: 315 G-GSSWGNQMRSYVLHPYQMVKDLRTEHEVNNPSAVLDGDIDGFLEEGIRWR 365
>gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|453069985|ref|ZP_21973238.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
gi|259585230|sp|C0ZXD0.1|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|452762530|gb|EME20826.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
Length = 368
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/349 (39%), Positives = 231/349 (66%), Gaps = 5/349 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+++L + + ELE +AAD W+++ AQ+ L+ + ++ + + ++D+ + +L
Sbjct: 25 VEELRRRIDELEHQAADPGLWNDQEHAQQVTSQLSHAQAELRRIVALRERLDEMPILYEL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E+ + DA + +A + L + E+ +LSG YD+ A+I+I +GAGG DA DW
Sbjct: 85 AED-EGPDA--VADADAERASLRDDIAAMEVKTMLSGEYDERDALINIRSGAGGIDAADW 141
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW EK Y V + S EEAG+KSA ++G Y YG LS E GTHR+VR
Sbjct: 142 AEMLMRMYIRWAEKHDYGVEVYDTSYAEEAGLKSATFAIKGPYTYGTLSVEMGTHRLVRI 201
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E + ++I E D+ + R+ G GGQ+VN ++AVR+
Sbjct: 202 SPFDNQGRRQTSFAEVEVLPVV-ETTDHIEINENDIRVDVYRSSGPGGQSVNTTDSAVRL 260
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQL NK+ A+ L+AKLL + ++ +E+ ++GD+ + WG Q+
Sbjct: 261 THIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLAVKRQEERAEMDALKGDS-GSSWGNQM 319
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
R+YV HPY++VKD+RT +E ++ +V+DG+++ F+++ ++++ S + SA
Sbjct: 320 RSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFLEAGIRWRMSENQSA 368
>gi|357399593|ref|YP_004911518.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386355632|ref|YP_006053878.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337766002|emb|CCB74713.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365806140|gb|AEW94356.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 368
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 234/360 (65%), Gaps = 4/360 (1%)
Query: 9 KDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN 68
+++++ S +E I A L ++ ++A LE +AA S WD+ AQ+ L+ ++ ++
Sbjct: 8 EELKSLSSTMESIEAVLDLDKMRADVAMLEEQAAAPSLWDDPDNAQKITSRLSYLQGELR 67
Query: 69 LLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
+++++D + +L E DA EA + + + +A+D+ E+ LLSG YD
Sbjct: 68 KTEALRSRIEDLAVLFELAEA--ENDADTRAEAETELVSVRQAVDEMEVRTLLSGEYDAR 125
Query: 129 GAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGR 188
A++S+ A AGG DA D+A+ L RMY+RW E+ Y T V+E S EEAGIKS V+
Sbjct: 126 EALVSVRAEAGGVDAADFAEQLQRMYLRWAERHGYPTEVLETSYAEEAGIKSTTFAVKSP 185
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E+S V+I E +L I R
Sbjct: 186 YAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDESELRIDVYR 244
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+ G GGQ VN ++AVRITH+PTG+ V C ERSQ+ N+ A++ L+AKLL ++ +
Sbjct: 245 SSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNRASAMNVLQAKLLERRRQEEQA 304
Query: 309 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V+DGE++ F+++ ++++
Sbjct: 305 KMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTDHEVGNPQAVLDGEIDGFLEAGIRWR 363
>gi|76798117|ref|ZP_00780371.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
gi|77405443|ref|ZP_00782536.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
gi|77408934|ref|ZP_00785658.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
gi|77411593|ref|ZP_00787935.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
gi|209559087|ref|YP_002285559.1| peptide chain release factor 2 [Streptococcus pyogenes NZ131]
gi|76586525|gb|EAO63029.1| peptide chain release factor 2 [Streptococcus agalactiae 18RS21]
gi|77162378|gb|EAO73347.1| peptide chain release factor 2 [Streptococcus agalactiae CJB111]
gi|77172476|gb|EAO75621.1| peptide chain release factor 2 [Streptococcus agalactiae COH1]
gi|77175936|gb|EAO78712.1| peptide chain release factor 2 [Streptococcus agalactiae H36B]
gi|209540288|gb|ACI60864.1| Peptide chain release factor 2 [Streptococcus pyogenes NZ131]
Length = 326
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 212/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E DS L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDS----LKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+LLRMY R+G +K
Sbjct: 62 MQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDGE+ FI +YLK++
Sbjct: 301 LAQVDKVMDGEINGFIDAYLKWR 323
>gi|322392321|ref|ZP_08065782.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
700780]
gi|321144856|gb|EFX40256.1| peptide chain release factor RF2 [Streptococcus peroris ATCC
700780]
Length = 325
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K N KMD+ V++ + + D + +E +
Sbjct: 6 FWNDNIAAQKTSQELNELKHTYNTFH----KMDELQDEVEILLDFLAEDESVKDELVEKL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL + + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 DELAQMMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|357237810|ref|ZP_09125150.1| peptide chain release factor 2 [Streptococcus ictaluri 707-05]
gi|356753559|gb|EHI70669.1| peptide chain release factor 2 [Streptococcus ictaluri 707-05]
Length = 327
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 212/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + D+ +++ EE DS + EE + +
Sbjct: 6 FWNDNIAAQKTSQELNELKLKYETFHNMQELSDETELYLEMLEEDDS----VKEELEASL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L + L +E+T LLS PYD A++ I G+GGT+AQDWADML RMY R+G + +K
Sbjct: 62 TKLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R TSF EVM
Sbjct: 122 ETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFVSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAAEVSALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG++E FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDIEGFIDAYLKWRMS 325
>gi|291528563|emb|CBK94149.1| bacterial peptide chain release factor 2 (bRF-2) [Eubacterium
rectale M104/1]
Length = 330
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 5/329 (1%)
Query: 39 MKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
M+A D FWD+ ++Q ++ L +KD + K + +D T++++ E D L+
Sbjct: 1 MEAPD--FWDDPEKSQSKMKELKSMKDDVATYAKLKEQYEDIETMIEMGYE--ENDESLI 56
Query: 99 EEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWG 158
E ++ + D + LLSG YDK A++ + AGAGGT++ DWA ML RMY +W
Sbjct: 57 PEIQQMLDDFESTYDGIRMKTLLSGEYDKCNAILRLNAGAGGTESCDWASMLFRMYSKWA 116
Query: 159 EKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTS 218
+K+ + V++ G+EAGIKS +V G AYGYL EKG HR+VR SPFNA G RQTS
Sbjct: 117 DKKGFTLEVLDSLDGDEAGIKSITFQVNGENAYGYLKSEKGVHRLVRISPFNAAGKRQTS 176
Query: 219 FSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCT 278
F +VMP + EE +D+++ ++D+ I R+ G GGQ++NK +A+RITH P+G+ V+C
Sbjct: 177 FVSCDVMPDI-EEDLDIEVKDDDIRIDTYRSSGAGGQHINKTSSAIRITHFPSGIVVQCQ 235
Query: 279 EERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVK 338
ERSQ NK KA+ LKAKL ++ +E+ A++ IRG+ + WG QIR+YV PY +VK
Sbjct: 236 NERSQHMNKDKAMQMLKAKLYLLKQEENAAKEAGIRGEVKEIGWGSQIRSYVLQPYTMVK 295
Query: 339 DVRTGHETSDIVSVMDGELEPFIKSYLKY 367
D RT ET + +V+DG ++ FI YLK+
Sbjct: 296 DHRTDVETGNADAVLDGNIDIFINGYLKW 324
>gi|257886811|ref|ZP_05666464.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
gi|431762435|ref|ZP_19550997.1| peptide chain release factor 2 [Enterococcus faecium E3548]
gi|257822865|gb|EEV49797.1| peptide chain release factor 2 [Enterococcus faecium 1,141,733]
gi|430625127|gb|ELB61777.1| peptide chain release factor 2 [Enterococcus faecium E3548]
Length = 327
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 209/325 (64%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V + +E DA + EEA
Sbjct: 2 AEPGFWDDSEAAQKVISENNANKETYDQFHSLAEELEEIELMVDMLQE--EPDAVMQEEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ I L++ ++ +EL+ LL GPYD+ A++ + GAGGT++QDW MLLRMY RW E+
Sbjct: 60 ETRINALDEKMNTYELSMLLDGPYDRNNAIVELHPGAGGTESQDWGSMLLRMYTRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
Y+ ++ G+EAGIKS + ++G A+GYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GYQVETLDYQAGDEAGIKSVTLLIKGHNAFGYLKAEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L +E++D++I +DL+I RA G GGQ++NK E+AVRITH+PTG V +R
Sbjct: 180 VDVMPEL-DETIDIEINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+ LKAKL + E++ E +RG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMGMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET ++ +VMDG+L+ FI YLK
Sbjct: 299 TNVETGNVQAVMDGDLDLFIDGYLK 323
>gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
Length = 372
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/351 (40%), Positives = 219/351 (62%), Gaps = 2/351 (0%)
Query: 15 SDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFK 74
+ R+ +R S L +EL EL+ + A FWD+ + +Q+ L+ T ++ +
Sbjct: 13 TSRISSLRRSLDLDSKREELQELDARIAAPGFWDDPSGSQDILKKRTVIEKLLQSWDSLN 72
Query: 75 TKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISI 134
+ DD +++L EE S+D L E + + L +++ E ++LSG +D+ G +S+
Sbjct: 73 RQADDVRVMIELGEE--SSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDRNGCFVSV 130
Query: 135 TAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYL 194
+GAGGT++QDWA+MLLRM +R+ EK+ +K + + GEEAG+KSA V G +AYG+L
Sbjct: 131 NSGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSGEFAYGHL 190
Query: 195 SGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGG 254
E G HR+VR SPF++ R TSF+ V P + EE +D++I + DL + R+ G GG
Sbjct: 191 KAEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTYRSSGSGG 250
Query: 255 QNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIR 314
Q+VN ++AVRITH+PT + V C ERSQ+ N+ A+ L+AKL E+R ++ +I
Sbjct: 251 QHVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERNAKASEIA 310
Query: 315 GDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
G+ + WG QIR+YV HPYK+VKD+RTG E+ + SV+DG L+ F+ +L
Sbjct: 311 GEKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFL 361
>gi|366053902|ref|ZP_09451624.1| peptide chain release factor 2 [Lactobacillus suebicus KCTC 3549]
Length = 332
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/330 (44%), Positives = 216/330 (65%), Gaps = 5/330 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEE 100
A+ FW++ +AQE + +K+K + + +DD VT L EE +DA + +E
Sbjct: 2 AEPGFWNDGQKAQELIGENNQLKEKRDTFVGLRDGVDDLRVTWSLLQEE---SDADMQQE 58
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
++ + + L+Q+ L QLL+ PYD A++ I GAGGT++QDW +MLLRM+ RW +
Sbjct: 59 FDDQLQSVKQKLEQYRLEQLLNEPYDANNAILEIHPGAGGTESQDWGEMLLRMFTRWAGQ 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
++ + GEEAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 119 HDFEVETADYEAGEEAGIKSVTLLIKGHNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
+VMP L ++S +V I ++DL + R+ G GGQ++NK +AVRITHIPTG+ V +
Sbjct: 179 SVDVMPEL-DDSTNVDISDDDLRVDVFRSSGAGGQHINKTSSAVRITHIPTGIVVSSQAQ 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQL N+ A++ LK+KL + EE++A + +I+G+ + WG QIR+YVFHPY LVKD
Sbjct: 238 RSQLQNRQTAMNMLKSKLYELEEEKKAKKRAEIQGEQLDIGWGSQIRSYVFHPYTLVKDH 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
RT ET D +VMDG+L+PFI +YL+++ S
Sbjct: 298 RTNFETHDGNAVMDGDLDPFINAYLQWRLS 327
>gi|392988944|ref|YP_006487537.1| peptide chain release factor 2 [Enterococcus hirae ATCC 9790]
gi|392336364|gb|AFM70646.1| peptide chain release factor 2 [Enterococcus hirae ATCC 9790]
Length = 326
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/325 (44%), Positives = 208/325 (64%), Gaps = 3/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ FWD+ AQ+ + K+ + ++++ +V++ +E DA + +EA
Sbjct: 2 AEPGFWDDSEAAQKVINENNTNKETYDQFNALAEELEELALMVEMLQE--EPDAQMQQEA 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
I+ L++ + +EL LL GPYD+ A++ + GAGGT++QDW MLLRMY RW E+
Sbjct: 60 EDRIQLLDEKMKTYELAMLLDGPYDRNHAIVELHPGAGGTESQDWGSMLLRMYTRWAEQH 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
Y+ ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ R TSF
Sbjct: 120 GYQVETLDYQAGDEAGIKSVTLLIKGHNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+VMP L +E++DV I +DL+I RA G GGQ++NK E+AVRITH+PTG V +R
Sbjct: 180 VDVMPEL-DETIDVAINPDDLKIDTYRASGAGGQHINKTESAVRITHLPTGTVVASQAQR 238
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQL N+ +A+S LKAKL + E++ E +RG+ + WG QIR+YVFHPY +VKD R
Sbjct: 239 SQLKNREQAMSMLKAKLYQLEVEKKEQEAAALRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET ++ +VMDG+L+ FI YLK
Sbjct: 299 TNVETGNVQAVMDGDLDLFIDGYLK 323
>gi|441507575|ref|ZP_20989501.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
gi|441448651|dbj|GAC47462.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
Length = 371
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 229/360 (63%), Gaps = 3/360 (0%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E+ + + + +L + + ELEM+A+D W+++ AQ+ L+ + ++
Sbjct: 8 DLESLDSTLTTVEKVLDVDELRRRIDELEMQASDPDLWNDQEHAQKVTSELSHAQSELRR 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTD-AGLLEEAASIIKELNKALDQFELTQLLSGPYDKE 128
+T+ + ++DD +L E + D + L +A + + L + E+ +L+G YD
Sbjct: 68 VTELRQRLDDMPVHYELAEAEEGEDRSAALADADAERESLRSDIQAMEVKTMLAGEYDSR 127
Query: 129 GAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGR 188
AV++I +GAGG DA DWA ML+RMYVRW EK Y V + S EEAG+KSA V+
Sbjct: 128 DAVVNIRSGAGGVDAADWAQMLMRMYVRWAEKHGYGVEVYDTSYAEEAGLKSATFAVKSP 187
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
Y YG LS E+GTHR+VR SPF+ +G RQTSF+ EV+P++ E + + + E D+++ R
Sbjct: 188 YMYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-ETTDHIDVDENDVKVDVYR 246
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+ G GGQ+VN ++AVR+THIPTG+ V C E+SQL NK A+ L+AKLL +++ +
Sbjct: 247 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQAKLLARKQQEERA 306
Query: 309 EIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
E+ ++GD + WG Q+R+YV HPY++VKD+RT E ++ +V+DG+++ FI++ ++++
Sbjct: 307 ELDALKGDG-GSSWGNQMRSYVLHPYQMVKDLRTNVENNNPATVLDGDIDEFIEAGIRWR 365
>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 348
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/340 (44%), Positives = 216/340 (63%), Gaps = 3/340 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L ++ ++ EL K D FWDN AQ+ ++ + KI+ +++A ++ L
Sbjct: 7 LSEMRNKVKELNDKQMDVGFWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDLIDL 66
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D D + ++ + K + F+L LL+G YD +ISI AGAGGT+AQDW
Sbjct: 67 MEMED--DYSFYGDLKLDLENIEKLSNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQDW 124
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A ML RMYVR+ EK+ ++ ++ EEAGIKS + + G AYGYL GEKG HR+VR
Sbjct: 125 ASMLNRMYVRYAEKRGFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLVRI 184
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+A R TSF+ +V P L +++ +V+I EDL+I R+ G GGQ+VN ++AVRI
Sbjct: 185 SPFDANKRRHTSFASLDVYPQLDDDN-EVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRI 243
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V+C ERSQ+ N+ KA++ LKAKL+ +AEE++ +I+ ++G+ + WG QI
Sbjct: 244 THIPTGIVVQCQNERSQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQI 303
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
R+YVF PY LVKD RT E D+ VMDG L+ FI SYL+
Sbjct: 304 RSYVFQPYTLVKDHRTNTEIGDVNKVMDGYLDEFINSYLQ 343
>gi|310778152|ref|YP_003966485.1| peptide chain release factor 2 (bRF-2) [Ilyobacter polytropus DSM
2926]
gi|309747475|gb|ADO82137.1| bacterial peptide chain release factor 2 (bRF-2) [Ilyobacter
polytropus DSM 2926]
Length = 365
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 235/367 (64%), Gaps = 8/367 (2%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D L+++ +++EEIR S L+ E ++ ELE + FW+++ E+++ ++ +
Sbjct: 2 DILELKREHSQHIEKIEEIRGSLDLEGKENKVKELEKETLKDGFWNDKRESEKLIKEMNA 61
Query: 63 VKDKINLLTDFKT--KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+K+ ++ ++++ K+ D V++ L E ++ + LEE + + L+K + F++ L
Sbjct: 62 LKE---IIGEYRSIEKLSDEVSV--LLEFVEMGEDEFLEELETKHRGLDKVIGAFDVKLL 116
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L G +D A+++I +GAGGT+A DWADML RMY RW + YK ++ GE GIKS
Sbjct: 117 LDGEFDANNAIVTIHSGAGGTEACDWADMLYRMYSRWCNNRGYKITELDFMPGEMVGIKS 176
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
I VEG AYGYL EKG HR+VR SPF+A R TSF+ +VMP + +E+ D++I
Sbjct: 177 ITILVEGMRAYGYLKNEKGIHRLVRISPFDANKKRHTSFASVDVMPEV-DETTDIEINTG 235
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+I RA G GGQ+VN ++AVRITH+P+GV V C ERSQL N+ A+ L++KLL
Sbjct: 236 DLKIDTYRASGAGGQHVNTTDSAVRITHLPSGVVVTCQRERSQLQNRETAMKLLRSKLLE 295
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ ++R E+K+I+G+ WG QIR+YVF PY LVKD RT E+ +I +VMDG+++ F
Sbjct: 296 LEMKKREEELKKIQGEQSDIGWGSQIRSYVFQPYTLVKDHRTLVESGNIKAVMDGDIDDF 355
Query: 361 IKSYLKY 367
I +L++
Sbjct: 356 INGHLRW 362
>gi|304389757|ref|ZP_07371716.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326933|gb|EFL94172.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 376
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 233/359 (64%), Gaps = 10/359 (2%)
Query: 18 VEEIRASAGL-------QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E++RAS + L +++A+L +AA WD++ AQ+ Q+L+ + + L
Sbjct: 11 IEKLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRL 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDA-GLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++DD +V+L E D +L +A + L + LD E+ LL+G YD+
Sbjct: 71 QKMRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERF 130
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I +GAGG DA D+A MLLRMY+R+ E+ Y T+V++ S EEAGIKS +V+ Y
Sbjct: 131 AVVTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPY 190
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG LS E GTHR+ R SPFNA G RQTSF+ EV+PL+ E + +++PE D++I R+
Sbjct: 191 AYGMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLI-ETTDHIEVPESDIKIDVFRS 249
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVR+TH+PTG+ + +E+SQ+ N+ A+ L+++LL++ +Q +
Sbjct: 250 SGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDK 309
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
K++ GD VKA WG Q+R+Y + +LVKD+RTG+E+ + SV DG+L+ FI + ++++
Sbjct: 310 KKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367
>gi|298346504|ref|YP_003719191.1| peptide subunit release factor RF2 [Mobiluncus curtisii ATCC 43063]
gi|298236565|gb|ADI67697.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 43063]
Length = 376
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 233/359 (64%), Gaps = 10/359 (2%)
Query: 18 VEEIRASAGL-------QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E++RAS + L +++A+L +AA WD++ AQ+ Q+L+ + + L
Sbjct: 11 IEKLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADLQRL 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDA-GLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++DD +V+L E D +L +A + L + LD E+ LL+G YD+
Sbjct: 71 QKMRARIDDMEALVELGAEESGEDRDAILVDAEQTYETLKRDLDAMEVKTLLNGEYDERF 130
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I +GAGG DA D+A MLLRMY+R+ E+ Y T+V++ S EEAGIKS +V+ Y
Sbjct: 131 AVVTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPY 190
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG LS E GTHR+ R SPFNA G RQTSF+ EV+PL+ E + +++PE D++I R+
Sbjct: 191 AYGMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLI-ETTDHIEVPESDIKIDVFRS 249
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVR+TH+PTG+ + +E+SQ+ N+ A+ L+++LL++ +Q +
Sbjct: 250 SGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDK 309
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
K++ GD VKA WG Q+R+Y + +LVKD+RTG+E+ + SV DG+L+ FI + ++++
Sbjct: 310 KKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367
>gi|387138177|ref|YP_005694156.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|389849923|ref|YP_006352158.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 258]
gi|349734655|gb|AEQ06133.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|388247229|gb|AFK16220.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 258]
Length = 366
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/344 (42%), Positives = 221/344 (64%), Gaps = 8/344 (2%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L + ELE +A+D + WDN AQ+ L+ V+ ++ LT + ++DD + +L
Sbjct: 26 EELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQRIDDMPVMYELA 85
Query: 88 EEM-DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE D T E A + EL ++ E+ +LSG YD AVI+I +GAGG DA DW
Sbjct: 86 EEEGDGT-----ELADEELAELTSEIESLEVKTMLSGEYDAREAVINIRSGAGGVDAADW 140
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMYVRW EK K + + S EEAGIKSA V G Y YG LS E+G HR+VR
Sbjct: 141 AEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRI 200
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E++ + IP+ ++ + R+ G GGQ+VN ++AVR+
Sbjct: 201 SPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRMDVYRSSGPGGQSVNTTDSAVRL 259
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+
Sbjct: 260 THIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAELDAL-GAGGNASWGNQM 318
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
R+YV HPY++VKD+RT +E +D V+DG+L+ F+++ ++++ +
Sbjct: 319 RSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFLEAGIRWRMA 362
>gi|315657060|ref|ZP_07909945.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492452|gb|EFU82058.1| peptide chain release factor RF2 [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 376
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 233/359 (64%), Gaps = 10/359 (2%)
Query: 18 VEEIRASAGL-------QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E++RAS + L +++A+L +AA WD++ AQ+ Q+L+ + + L
Sbjct: 11 IEKLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQADMQRL 70
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDA-GLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++DD +V+L E D +L +A + L + LD E+ LL+G YD+
Sbjct: 71 QKMRARIDDMEALVELGAEESGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERF 130
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I +GAGG DA D+A MLLRMY+R+ E+ Y T+V++ S EEAGIKS +V+ Y
Sbjct: 131 AVVTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPY 190
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG LS E GTHR+ R SPFNA G RQTSF+ EV+PL+ E + +++PE D++I R+
Sbjct: 191 AYGMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLI-ETTDHIEVPESDIKIDVFRS 249
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVR+TH+PTG+ + +E+SQ+ N+ A+ L+++LL++ +Q +
Sbjct: 250 SGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDK 309
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
K++ GD VKA WG Q+R+Y + +LVKD+RTG+E+ + SV DG+L+ FI + ++++
Sbjct: 310 KKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367
>gi|395203753|ref|ZP_10394846.1| peptide chain release factor 2 [Propionibacterium humerusii P08]
gi|422439222|ref|ZP_16516045.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
gi|422470709|ref|ZP_16547209.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
gi|422574464|ref|ZP_16650018.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
gi|313837551|gb|EFS75265.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA2]
gi|314927570|gb|EFS91401.1| peptide chain release factor 2 [Propionibacterium acnes HL044PA1]
gi|314972490|gb|EFT16587.1| peptide chain release factor 2 [Propionibacterium acnes HL037PA3]
gi|328907839|gb|EGG27602.1| peptide chain release factor 2 [Propionibacterium humerusii P08]
Length = 371
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 219/336 (65%), Gaps = 5/336 (1%)
Query: 33 ELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDS 92
E+A+LE + A + WD++ AQ L+ ++ +I L + +++D +++ D
Sbjct: 35 EIADLEKQVAAPNLWDDQENAQWVTSRLSALQAEIERLERLRARIEDVHVLLEFATADDD 94
Query: 93 TDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLR 152
++ L EA S +L + +D E+ LLSG YD+ AV++I + AGG DA D+A+MLLR
Sbjct: 95 KES--LTEATSETVKLREEIDALEVRILLSGQYDEREAVVTIRSEAGGVDAADFAEMLLR 152
Query: 153 MYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAK 212
MY+RW E+ YK +++ S EEAGIKSA V ++YG LS E+GTHR+VR SPF+ +
Sbjct: 153 MYLRWAERHGYKVEILDTSYAEEAGIKSATFVVHAPFSYGTLSVEQGTHRLVRISPFDNQ 212
Query: 213 GLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTG 272
G RQTSF+G EV+P++ EE+ V IPE DL + A G GGQ VN ++AVR+TH+PTG
Sbjct: 213 GRRQTSFAGVEVLPVV-EETDHVDIPESDLRVDVFHASGPGGQGVNTTDSAVRLTHLPTG 271
Query: 273 VTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFH 332
+ V C ERSQ+ NK AL L+AKLL A E++ +E+ ++ + WG Q+R+YV H
Sbjct: 272 IVVSCQNERSQIQNKAAALRVLQAKLLEKAREEQEAEMNSLKSEG--NSWGAQMRSYVLH 329
Query: 333 PYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
PY++VKD+RT HE + +V DG+++ FI + ++++
Sbjct: 330 PYQMVKDLRTNHEVGNTDAVFDGDIDDFIGAGIRWR 365
>gi|410680209|ref|YP_006932611.1| peptide chain release factor 2 [Streptococcus pyogenes A20]
gi|409692798|gb|AFV37658.1| peptide chain release factor 2 [Streptococcus pyogenes A20]
Length = 326
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 212/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E DS L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDS----LKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+LLRMY R+G +K
Sbjct: 62 MQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKI 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V++ ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVEVRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDGE+ FI +YLK++
Sbjct: 301 LAQVDKVMDGEINGFIDAYLKWR 323
>gi|320528516|ref|ZP_08029673.1| peptide chain release factor 2 [Solobacterium moorei F0204]
gi|320131102|gb|EFW23675.1| peptide chain release factor 2 [Solobacterium moorei F0204]
Length = 350
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 144/343 (41%), Positives = 220/343 (64%), Gaps = 9/343 (2%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI---NLLTDFKTKMDDAVTI 83
L+ EK LAE A++ FW+++ +AQ+ ++ +K I + LTD ++ + +
Sbjct: 7 LEGKEKRLAENNALMAEADFWNDQKKAQKIIRESNQLKVLIETHHSLTDSFAELSEGIG- 65
Query: 84 VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+L+ D L+ E + E K ++FE+ LLSGPYD +++ I GAGGT+A
Sbjct: 66 -ELSSSFDEDMNELISEEYT---ETMKKFEEFEIQVLLSGPYDNHNSILEIHPGAGGTEA 121
Query: 144 QDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
DWA ML RMY+RW E++ +K +++ GEEAG+KS + ++G AYGYL E G HR+
Sbjct: 122 MDWAAMLYRMYMRWAERKGFKIELMDYQEGEEAGMKSCSVLIQGPMAYGYLKAENGVHRL 181
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VR SPF++ R TSF+ E+MP E+ ++++I ++DL+I RA G GGQ++NK ++A
Sbjct: 182 VRISPFDSNARRHTSFASVEIMPEF-EDDLEIEIDDKDLDIITMRASGAGGQHINKTDSA 240
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
VR+THIP+G+TV C +RSQ+ N+ L+ LK+KLL + + +RG+ EWG
Sbjct: 241 VRMTHIPSGITVFCQSQRSQIQNREACLNMLKSKLLQLKIRENEERAAAVRGEVKANEWG 300
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
QIR+YVF PY +VKD+RTGHE ++ +VMDGE++ FI SYL+
Sbjct: 301 SQIRSYVFAPYTMVKDLRTGHEAGNVQAVMDGEIDGFIDSYLR 343
>gi|347549812|ref|YP_004856140.1| putative peptide chain release factor 2 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346982883|emb|CBW86917.1| Putative peptide chain release factor 2 [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 338
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 215/337 (63%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L E I +++FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQAELEKDITAYMATINEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ +DL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRPDDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNRDQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT HET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNHETGNIQAVMDGDLDDFINAYLR 334
>gi|386386064|ref|ZP_10071263.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
gi|385666472|gb|EIF90016.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
Length = 368
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/346 (44%), Positives = 225/346 (65%), Gaps = 12/346 (3%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L ++ ++A LE +AA S WD+ AQ+ L+ ++ ++ + ++DD + +L
Sbjct: 26 LDRIRADIAVLEEQAAAPSLWDDPEAAQKITSRLSHLQAELRKAEHLRGRIDDLAVLFEL 85
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D DA L EA + + + +A+D+ E+ LLSG YD+ A+++I A AGG DA D+
Sbjct: 86 AEAED--DADTLAEAETELVSVRRAVDEMEVRTLLSGEYDEREALVNIRAEAGGVDASDF 143
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ L RMY+RW E+ Y T V E S EEAGIKS V+ YAYG LS E+GTHR+VR
Sbjct: 144 AERLQRMYLRWAERHGYSTEVYETSYAEEAGIKSTTFVVKAPYAYGTLSVEQGTHRLVRI 203
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+G EV+P++ E S V+I E +L I RA G GGQ VN ++AVRI
Sbjct: 204 SPFDNQGRRQTSFAGVEVLPVV-ESSDHVEIDESELRIDVYRASGPGGQGVNTTDSAVRI 262
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAE----W 322
THIPTG+ V C ERSQ+ NK A++ L+AKLL E+R E +Q R DA+K + W
Sbjct: 263 THIPTGIVVSCQNERSQIQNKASAMNVLQAKLL----ERRRQE-EQARMDALKGDGGNSW 317
Query: 323 GQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
G Q+R+YV HPY++VKD+RT E + +V+DGE++ F+++ ++++
Sbjct: 318 GNQMRSYVLHPYQMVKDLRTEFEVGNPQAVLDGEIDGFLEAGIRWR 363
>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
Length = 373
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 233/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L ++ +++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 7 DVSEELKSLSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQA 66
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L D DA EEA + + KALD+ E+ LLSG Y
Sbjct: 67 EVRKAEGLRGRIDDLGVLFELA--ADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEY 124
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D AV++I A AGG DA D+A+ L RMY+RW E+ YKT + E S EEAGIKS V
Sbjct: 125 DSREAVVTIRAEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAV 184
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 185 HVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 243
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 244 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQE 303
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 304 EQEKMNALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 362
Query: 366 KYK 368
+++
Sbjct: 363 RWR 365
>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
Length = 371
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 233/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L ++ +++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L D DA EEA + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEGLRGRIDDLGVLFELA--ADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D AV++I A AGG DA D+A+ L RMY+RW E+ YKT + E S EEAGIKS V
Sbjct: 123 DSREAVVTIRAEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 HVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 302 EQEKMNALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 369
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 222/370 (60%), Gaps = 2/370 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M + Y LR+ ++ ++ I A L E+ +E + +FWD+ +AQE + L
Sbjct: 1 MAEIYELREIIKELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADL 60
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+D KD + K ++ D ++ + EE + L++ S+ L K + F++
Sbjct: 61 SDKKDDYKTFINLKEELKDQSDLIDIIEETNEELDSLVDVENSL-NMLKKEISSFKIKTE 119
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L G YD+ A + I AGAGG +A DWA+ML+RMY R+ E++ +K + + + E GIKS
Sbjct: 120 LDGEYDRNNAYMVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKS 179
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A I ++G +AYGYL GE+G HR+VR SPF++ R TSF+ ++ P L ++ M V+I +
Sbjct: 180 ATIHIKGSFAYGYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDD-MSVEIDPK 238
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ+VNK ++AVRITHIPTGV ERSQ NK A+ L AKL
Sbjct: 239 DLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQ 298
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
I EE+ +I+ I+G+ + WG QIR+YVFHPY LVKD RT E ++ SVMDG+++ F
Sbjct: 299 IKEEEHREKIEDIQGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGF 358
Query: 361 IKSYLKYKYS 370
I +YL K S
Sbjct: 359 IDAYLANKGS 368
>gi|392963551|ref|ZP_10328977.1| Peptide chain release factor 2 [Pelosinus fermentans DSM 17108]
gi|421077424|ref|ZP_15538395.1| Peptide chain release factor 2 [Pelosinus fermentans JBW45]
gi|392451375|gb|EIW28369.1| Peptide chain release factor 2 [Pelosinus fermentans DSM 17108]
gi|392524812|gb|EIW47967.1| Peptide chain release factor 2 [Pelosinus fermentans JBW45]
Length = 327
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 209/322 (64%), Gaps = 5/322 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ Q L +KD + T +D + ++ M+ D + E +
Sbjct: 6 FWDDPDKAQKVAQELNVLKDGVAQFEQLSTAYEDLSLLWQMG--MEEKDESIYPEVLEAV 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++ K +++ E+ +LSG +D A++++ AGAGGT+AQDWA MLLRMYVRW EK YK
Sbjct: 64 DKMTKDIERLEVALMLSGEHDGSNAILTLHAGAGGTEAQDWAQMLLRMYVRWAEKNGYKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAG+KSA I V G AYGYL EKG HR+VR SPF+A G R TSF+ +VM
Sbjct: 124 ETMDFLAGDEAGVKSATILVSGLNAYGYLKSEKGVHRLVRISPFDASGRRHTSFAAVDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++++D+ I D+ + RA G GGQ++NK ++AVR+TH+PTGV V+C +RSQ+
Sbjct: 184 PEI-DDNVDIDINMADVRVDTYRASGAGGQHINKTDSAVRMTHVPTGVVVQCQTQRSQIK 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIK-QIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
N+ + + L+AKL + E Q+ IK ++ GD EWG QIR+YVFHPY +VKD RT
Sbjct: 243 NREQCMKMLRAKLYEL-ERQKQENIKNELGGDYQAIEWGSQIRSYVFHPYNMVKDHRTNA 301
Query: 345 ETSDIVSVMDGELEPFIKSYLK 366
ET ++ + MDG+L FI++YLK
Sbjct: 302 ETGNVHAAMDGDLGLFIEAYLK 323
>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
Length = 370
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 239/369 (64%), Gaps = 13/369 (3%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ D+E+ + + L++L + + ELEM+A+D W+++ AQ+ L+ +
Sbjct: 4 DVSTDLESLDATLTTVEKVMDLEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQA 63
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGL--LEEAASIIKELNKALDQFELTQLLSG 123
++ +T+ ++++DD + +L E + DAG+ E+A + +L + ++ E+ +L+G
Sbjct: 64 ELRRVTELRSRLDDLPVLYELAE-AEEGDAGVSATEDADTERADLRRDIEAMEVKTMLAG 122
Query: 124 PYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVI 183
YD A+++I +GAGG DA DWA ML+RMY+RW E+ + V + S EEAG+KSA
Sbjct: 123 EYDPREALVNIRSGAGGVDAADWAQMLMRMYIRWAEQHGHSVEVYDTSYAEEAGLKSATF 182
Query: 184 EVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLE 243
V+ Y YG LS E+GTHR+VR SPF+ +G RQTSF+ EV+P++ E + + I E D+
Sbjct: 183 AVKAPYMYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-ETTDHIDIDENDVR 241
Query: 244 ISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAE 303
+ R+ G GGQ+VN ++AVR+TH+PTG+ V C E+SQL NK+ A+ L+AKLL E
Sbjct: 242 VDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQAKLL---E 298
Query: 304 EQRASEIKQIRGDAVK----AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEP 359
+R E Q+ DA+K A WG Q+R+YV HPY++VKD+RT E+++ +V+DGEL+
Sbjct: 299 RKRQEERAQM--DALKSDTGASWGNQMRSYVLHPYQMVKDLRTNVESNNPSAVLDGELDQ 356
Query: 360 FIKSYLKYK 368
FI++ ++++
Sbjct: 357 FIEAGIRWR 365
>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
gi|166225118|sp|A6LN93.1|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
Length = 369
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 229/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y L++ ++ R E+I + +KEL ELE +S FW+++ A+E Q ++
Sbjct: 4 YELKQRIDEVKKRYEDIVKVFHPEDKKKELEELEKLMGESDFWNDQKRAKEISQNAQRIR 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
I+ + D + K+ ++ E+ DA L+ +I ++ + + FEL +L+
Sbjct: 64 KIIDDMVDIENKL----EDLEAGLELLEEDATFLDTIKQLIDDIERKVKTFELELILNEK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
+D A +SI GAGGT++QDWA MLLRMY+RW E++ + ++V+ GEEAGIKSA++
Sbjct: 120 FDSSNAYLSIHPGAGGTESQDWASMLLRMYMRWAERRGFDVQIVDYQPGEEAGIKSAMLY 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G Y YGYL E+G HR+VR SPF+A R TSF+ VMP + E+ +DV+I EDL I
Sbjct: 180 IKGEYVYGYLKYERGVHRLVRISPFDANKRRHTSFASVNVMPEI-EDDIDVEINPEDLRI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITHIPTG+ V C ERSQL NK A+ LKA+L + E
Sbjct: 239 DTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQTERSQLQNKETAMKVLKARLYQLELE 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
+R ++++I+G+ WG QIR+YVF PY +VKD RT ET +I +VMDG+++ FI+S
Sbjct: 299 KRQKQLEEIQGELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGDIDIFIESE 358
Query: 365 LKY 367
L +
Sbjct: 359 LIF 361
>gi|423100842|ref|ZP_17088548.1| peptide chain release factor 2 [Listeria innocua ATCC 33091]
gi|370792648|gb|EHN60504.1| peptide chain release factor 2 [Listeria innocua ATCC 33091]
Length = 338
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 215/337 (63%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L E IK + +FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQAELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
Length = 340
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 143/339 (42%), Positives = 219/339 (64%), Gaps = 3/339 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E+++AE E + A+ FWD+ AQ+ + K+ + + ++++ ++++ +E
Sbjct: 1 MEEDIAEAENRMAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D + +E A+ EL + +EL LL GPYD A+I + GAGGT++QDW M
Sbjct: 61 --EPDDEMEQELATRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW +K+ ++ ++ G+EAGIKS + ++GR A+GYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWADKRGFQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ R TSF +VMP L ++++D++I +DL+I RA G GGQ++NK E+AVRITHI
Sbjct: 179 DSANRRHTSFCSVDVMPEL-DDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG V +RSQL N+ +A+ LKAKL + E++ E +RG+ ++ WG QIR+Y
Sbjct: 238 PTGTVVASQAQRSQLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VFHPY +VKD RT ET ++ +VMDG+++ FI +YLK K
Sbjct: 298 VFHPYSMVKDHRTNFETGNVQAVMDGDIDGFIDAYLKQK 336
>gi|386051480|ref|YP_005969471.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561]
gi|404285001|ref|YP_006685898.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2372]
gi|405759558|ref|YP_006688834.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2479]
gi|346425326|gb|AEO26851.1| peptide chain release factor 2 [Listeria monocytogenes FSL R2-561]
gi|404234503|emb|CBY55906.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2372]
gi|404237440|emb|CBY58842.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2479]
Length = 338
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/337 (43%), Positives = 214/337 (63%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISAFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L + +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DGDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQL N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 334
>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
Length = 371
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 148/363 (40%), Positives = 233/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L ++ +++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLGKMREDIASLEEQAAAPSLWDDPDAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + +L D DA EEA + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEGLRGRIDDLGVLFELA--ADEGDADTQEEAEQELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D AV++I A AGG DA D+A+ L RMY+RW E+ YKT + E S EEAGIKS V
Sbjct: 123 DSREAVVTIRAEAGGVDASDFAERLQRMYLRWAERLGYKTELYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
YAYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ ++I E +L +
Sbjct: 183 HTPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 302 EQEKMNALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
efficiens YS-314]
Length = 389
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 222/343 (64%), Gaps = 6/343 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L + ELE +AAD WDN AQ+ L+ V+ ++ +T+ + ++DD + +L
Sbjct: 48 EELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTELRQRLDDLPIMYELA 107
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE + D L++E + +L ++ E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 108 EE-EGDDTSLVDEE---LADLRTGVEALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 163
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY+RW EK +K V + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 164 EMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 223
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ ++ + R+ G GGQ+VN ++AVR+T
Sbjct: 224 PFDNQGRRQTSFAEVEVLPVV-EQVDSIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLT 282
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 283 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDAL-GAGGNASWGNQMR 341
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+YV HPY++VKD+RT +E +D V+DG+++ +++ ++++ +
Sbjct: 342 SYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWRMA 384
>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
Length = 387
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 222/343 (64%), Gaps = 6/343 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L + ELE +AAD WDN AQ+ L+ V+ ++ +T+ + ++DD + +L
Sbjct: 46 EELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTELRQRLDDLPIMYELA 105
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE + D L++E + +L ++ E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 106 EE-EGDDTSLVDEE---LADLRTGVEALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 161
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY+RW EK +K V + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 162 EMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 221
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ ++ + R+ G GGQ+VN ++AVR+T
Sbjct: 222 PFDNQGRRQTSFAEVEVLPVV-EQVDSIDIPDSEVRVDVYRSSGPGGQSVNTTDSAVRLT 280
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 281 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRQEERAEMDAL-GAGGNASWGNQMR 339
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
+YV HPY++VKD+RT +E +D V+DG+++ +++ ++++ +
Sbjct: 340 SYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLLEAGIRWRMA 382
>gi|148992417|ref|ZP_01822112.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
gi|417678740|ref|ZP_12328137.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
gi|418233946|ref|ZP_12860526.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08780]
gi|419507820|ref|ZP_14047474.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49542]
gi|421219939|ref|ZP_15676794.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070425]
gi|421222270|ref|ZP_15679064.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070531]
gi|421278520|ref|ZP_15729330.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17301]
gi|421293665|ref|ZP_15744389.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56113]
gi|147928734|gb|EDK79747.1| peptide chain release factor 2 [Streptococcus pneumoniae SP9-BS68]
gi|332073119|gb|EGI83598.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17570]
gi|353889385|gb|EHE69156.1| peptide chain release factor 2 [Streptococcus pneumoniae GA08780]
gi|379612665|gb|EHZ77382.1| peptide chain release factor 2 [Streptococcus pneumoniae GA49542]
gi|395589594|gb|EJG49912.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070531]
gi|395590014|gb|EJG50329.1| peptide chain release factor 2 [Streptococcus pneumoniae 2070425]
gi|395881892|gb|EJG92940.1| peptide chain release factor 2 [Streptococcus pneumoniae GA17301]
gi|395894997|gb|EJH05973.1| peptide chain release factor 2 [Streptococcus pneumoniae GA56113]
Length = 325
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 213/325 (65%), Gaps = 5/325 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+ Q L ++K+ N + D+ ++ E D + +E + +
Sbjct: 6 FWNDNIAAQKMSQELNELKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
EL+K + +E+T LLS PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K
Sbjct: 62 AELDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I E+D+++ R+GG GGQNVNKV T VR+T+IPTG+ V+ T +R+Q
Sbjct: 182 PEL-DDTIEVEIREDDIKMDTFRSGGAGGQNVNKVSTGVRLTYIPTGIVVQSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A+E+ ++G+ + WG QIR+YVF PY +VKD RT +E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYKYS 370
+ + VMDG+L+ FI +YLK++ S
Sbjct: 301 VAQVDKVMDGDLDGFIDAYLKWRIS 325
>gi|342732927|ref|YP_004771766.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|384456295|ref|YP_005668892.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417962232|ref|ZP_12604484.1| peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-2]
gi|417964130|ref|ZP_12605901.1| peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-3]
gi|417964940|ref|ZP_12606573.1| Peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-4]
gi|417966272|ref|ZP_12607665.1| Putative peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-5]
gi|417969365|ref|ZP_12610306.1| peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-co]
gi|418015665|ref|ZP_12655230.1| peptide chain release factor RF2 [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418373178|ref|ZP_12965269.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342330382|dbj|BAK57024.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506000|gb|EGX28294.1| peptide chain release factor RF2 [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984640|dbj|BAK80316.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330419|gb|EIA21694.1| peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-3]
gi|380330768|gb|EIA21943.1| peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-2]
gi|380338028|gb|EIA26981.1| peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-co]
gi|380339441|gb|EIA28178.1| Peptide chain release factor 2 [Candidatus Arthromitus sp. SFB-4]
gi|380341567|gb|EIA30041.1| peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|380343212|gb|EIA31617.1| Putative peptide chain release factor 2 [Candidatus Arthromitus sp.
SFB-5]
Length = 331
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 145/332 (43%), Positives = 216/332 (65%), Gaps = 19/332 (5%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKI----NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLL 98
D+ FWD+ + ++ +KD+I NL D++ ++ ++ ++K D D
Sbjct: 4 DTKFWDDVENSTRIVRISKSLKDRIDEVNNLSKDYEYLLE-SLELIK-----DDND---- 53
Query: 99 EEAASIIKE----LNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMY 154
EE I K+ +D + +L+G YDK A ++I AGAGG DAQDW++ML RMY
Sbjct: 54 EEYIKIFKDDFYKFKDLIDNLSIRTILNGEYDKNNAFLTIHAGAGGVDAQDWSEMLFRMY 113
Query: 155 VRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGL 214
+RWGE+ ++ V+E ++G+EAGIKSA I++EG YAYGY+ GE+G HR+VR SPFNA G
Sbjct: 114 MRWGEENKFTLNVIEYTIGDEAGIKSATIKIEGEYAYGYMKGERGIHRLVRISPFNANGK 173
Query: 215 RQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVT 274
RQTSF+ E++P + + +V+I E +L+I RA G GGQ+VNK E+AVRITH+ TG+
Sbjct: 174 RQTSFASVEILPEI-QNIKEVKINESELKIDTYRASGAGGQHVNKTESAVRITHLKTGIV 232
Query: 275 VRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPY 334
V+C ERSQL+NK A+ L +KL+ + + +++ + GD + +G QIR+YV HPY
Sbjct: 233 VQCQNERSQLSNKETAMKMLVSKLIELKDRTHKEKLEDLTGDLKEIGFGSQIRSYVMHPY 292
Query: 335 KLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
LVKD R E SDI V+DG+++ FIK+++K
Sbjct: 293 TLVKDHRMNVEISDINKVLDGDIDIFIKNHIK 324
>gi|429759674|ref|ZP_19292170.1| peptide chain release factor 2 [Veillonella atypica KON]
gi|429179264|gb|EKY20520.1| peptide chain release factor 2 [Veillonella atypica KON]
Length = 330
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 140/333 (42%), Positives = 224/333 (67%), Gaps = 5/333 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-EEMDSTDAGLLEE 100
+D +FWDN +A+E Q T +K+ + + ++DA ++ + EE D++ G +++
Sbjct: 2 SDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIKQ 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
+ I+E A+++ E+ LL G YD+ A+++ AGAGGT+AQDW ML+RMY+RW EK
Sbjct: 62 FVNGIQE---AVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEK 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ ++++ LG+EAGIKSA ++G A+GYL EKG HR+VR SPF+A R TSF+
Sbjct: 119 TGFSVELMDEQLGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
+VMP + ++++++ I +D+++ RA G GGQ++NK ++AVR+TH PTG+ V+C +
Sbjct: 179 AVDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQ 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ+ N+ +AL L+AKL + E++A +QI G EWG QIR+YVFHPY +VKD
Sbjct: 238 RSQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDH 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
RT ET ++ +VMDG ++ FI+ YLK + ++++
Sbjct: 298 RTSVETGNVQAVMDGNIDQFIEGYLKKEANLTV 330
>gi|405756621|ref|YP_006680085.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2540]
gi|404225821|emb|CBY77183.1| peptide chain release factor 2 [Listeria monocytogenes SLCC2540]
Length = 338
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 215/337 (63%), Gaps = 3/337 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
+E +AELE + D +FW+++ AQ+ + K+ + + + ++L +E
Sbjct: 1 MEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKE 60
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D L EE IK + +FEL +LS PYDK A++ + GAGGT++QDW M
Sbjct: 61 --EADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSM 118
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY RW EK+ +K +++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF
Sbjct: 119 LLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPF 178
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
++ G R TSF +VMP L ++ +++++ EDL+I RA G GGQ++N ++AVR+THI
Sbjct: 179 DSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHI 237
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
P+G+ V C ERSQ N+ +A+ LK KL +E++ E+ +IRG+ + WG QIR+Y
Sbjct: 238 PSGIVVTCQSERSQPKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSY 297
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
VFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 298 VFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLR 334
>gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
gi|189040002|sp|A9BHH8.1|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
Length = 366
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 147/368 (39%), Positives = 233/368 (63%), Gaps = 9/368 (2%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y + ++ + E+++ + ++E+E+ +L+ + + +FW+++ A++ + ++K
Sbjct: 4 YETKVKIDELKENFEDLKDVFNIDKVEEEVKKLDKEMMEPNFWNDQNRAKKISKMAQNLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
D+I+ +FK K+++ +++ E+ D + + +I+K + K + F L LLS
Sbjct: 64 DEID---EFK-KLENDFEELEIAVELSEDDPSMTAQVEAILKVIEKKIGSFRLRMLLSEE 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY RW +K Y ++ G+EAGIKSA I+
Sbjct: 120 YDDANAFLSLHPGAGGTESQDWASMLLRMYTRWADKNNYDIETIDFQEGDEAGIKSATIK 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+ G YAYG L E G HR+VR SPF+A G R TSF+ VMP +E+++++I +DL+I
Sbjct: 180 ISGPYAYGKLKYESGVHRLVRISPFDANGRRHTSFASISVMPEF-DENVEIEINPDDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
R+GG GGQ+VNK ++AVRITH+PTG+ V ERSQ NK AL LKAKL + +
Sbjct: 239 DTYRSGGAGGQHVNKTDSAVRITHLPTGIVVAVQNERSQHQNKATALKILKAKLYELEHQ 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKS- 363
++ E ++RG+ WG QIR+YV +PY LVKD+RT +ETS+ +V+DGE++ FI+
Sbjct: 299 KKLEEKLRLRGEVKDISWGNQIRSYVLYPYTLVKDLRTEYETSNAQAVLDGEIDEFIEEE 358
Query: 364 ---YLKYK 368
+ KYK
Sbjct: 359 LLFFAKYK 366
>gi|422012230|ref|ZP_16358943.1| peptide chain release factor 2 [Actinomyces georgiae F0490]
gi|394759088|gb|EJF41890.1| peptide chain release factor 2 [Actinomyces georgiae F0490]
Length = 372
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 231/342 (67%), Gaps = 4/342 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
++L ++AEL KAA WD+ A AQE AL+ + +++ + ++DD +V++
Sbjct: 26 ERLRAQIAELNEKAAAPDLWDDPARAQEVTSALSHRQSELDRVVRMGERIDDLEAMVEMA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
E +L EAA+ ++ L K + E+ LL G YD+ AVI+I +GAGG DA D+A
Sbjct: 86 GEDPDEAEEILAEAAADLEALKKDVSDLEIRTLLDGEYDERNAVITIRSGAGGVDAADFA 145
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
++LLRMY+RW E+ Y T+V++ S EEAG+KSA EV+ YAYG LS E GTHR+VR S
Sbjct: 146 EILLRMYLRWAERHGYPTKVMDTSYAEEAGLKSATFEVQAPYAYGTLSVEAGTHRLVRIS 205
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
PF+ +G RQTSF+ EV+PL+ ES D ++IPE +L++ R+ G GGQ+VN ++AVR+
Sbjct: 206 PFDNQGRRQTSFAAVEVIPLI--ESTDHIEIPESELKVDVFRSSGPGGQSVNTTDSAVRM 263
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V +E+SQ+ N+ AL L+++LLV+ E+ ++ K++ GD VKA WG Q+
Sbjct: 264 THIPTGIVVSMQDEKSQIQNRAAALRVLQSRLLVLRHEEEQAKKKELAGD-VKASWGDQM 322
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV PY++VKD+RT E+ + +V DG+++ FI + ++++
Sbjct: 323 RSYVLQPYQMVKDLRTEFESGNPQAVFDGDIDGFINAGIRWR 364
>gi|255528153|ref|ZP_05394980.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
gi|255508166|gb|EET84579.1| peptide chain release factor 2 [Clostridium carboxidivorans P7]
Length = 326
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 146/326 (44%), Positives = 210/326 (64%), Gaps = 7/326 (2%)
Query: 43 DSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT-EEMD-STDAGLLEE 100
+ +FW++ +AQE +K +++ + +TK+ DA + KL EE D S+ ++ E
Sbjct: 3 EPNFWNDTDKAQEITSEERFLKSRLDKYKELETKIQDAEFLTKLAIEENDLSSSKDIIRE 62
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
++E++ ++F + LLSG YDK A++ I G GGTDAQDW +MLLRMY RW EK
Sbjct: 63 ----VEEIDNETERFRIEILLSGEYDKNNAIMDIHVGVGGTDAQDWTEMLLRMYTRWAEK 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ +K V+ E+AGIKSA + + G +AYGYL EKG HR+VR SPFNA G RQTSF+
Sbjct: 119 KGFKIETVDILPAEDAGIKSATLRIIGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFA 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
EV+P L + D+ I +D+++ R+ G GGQ+VNK E+A+RITHIPTG+ V+C +
Sbjct: 179 SIEVLPELT-NNQDIDIKPDDIKVDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQNQ 237
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ N+ +A+ LKAKL + E +I+ + G+ WG QIR+YVF PY +VKD
Sbjct: 238 RSQHHNREEAMRMLKAKLAELKERAHKEKIEDLTGELKDMGWGSQIRSYVFQPYTMVKDH 297
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
RT E +I +VMDG+++ FI YLK
Sbjct: 298 RTSVECGNINAVMDGDIDQFINEYLK 323
>gi|407478095|ref|YP_006791972.1| peptide chain release factor 2 [Exiguobacterium antarcticum B7]
gi|407062174|gb|AFS71364.1| Peptide chain release factor 2 [Exiguobacterium antarcticum B7]
Length = 366
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 147/362 (40%), Positives = 218/362 (60%), Gaps = 7/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R E +++E +AS L+ + ELE + FW+N QE+ Q + D +
Sbjct: 6 IRNTAEWMEKKLDEYKASLDLENKISRIEELENEMTYPDFWNN----QESAQKVIDESNG 61
Query: 67 INLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ + D + D + LT E+ + D L E+ S + ++ + D+FEL LL+G
Sbjct: 62 LKAMVDKYQHLADGHENIVLTYELIKEEPDVELQEDLESELGDIKRKFDEFELQILLNGE 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A++ + GAGGT++QDWA MLLRMY R+ +KQ +K ++ G+EAG+KS +
Sbjct: 122 YDANNAILELHPGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLR 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G AYGYL EKG HR+VR SPF++ G R TSF +VMP ++ +D+ I EDL +
Sbjct: 182 IQGHNAYGYLKAEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFNDD-IDIDIRTEDLRV 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ++N ++AVRITHIPT V V C +ERSQ+ N+ A+ LKAKL E
Sbjct: 241 DTYRASGAGGQHINTTDSAVRITHIPTNVVVSCQQERSQIKNREAAMKMLKAKLYQREIE 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ ++ +IRG+ WG QIR+YVFHPY +VKD RT +E + MDG++ FI +Y
Sbjct: 301 EKQKKLDEIRGEKSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAY 360
Query: 365 LK 366
L+
Sbjct: 361 LR 362
>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
gi|123751448|sp|Q2JEW7.1|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
Length = 366
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/345 (43%), Positives = 213/345 (61%), Gaps = 7/345 (2%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
++ L + +LE +AAD W ++ AQ + L+ + I + + ++DD L
Sbjct: 25 VEGLRRRAEDLERQAADPDLWSDQDRAQAVTRRLSSTRGDIARVEGLRRRLDDIAAAADL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
+E LL EAA+ + L+ + E+ LLSG YD+ A++ ++AGAGG DA DW
Sbjct: 85 GDE------DLLAEAAADLPRLSSDIAGLEVRTLLSGEYDERDAIVQLSAGAGGVDAADW 138
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
MLLRMY+RW E+ Y T V + S EEAG+KSA +V+ YAYG L E G HR+VR
Sbjct: 139 TAMLLRMYLRWAERHGYATEVFDTSEAEEAGLKSATFQVKAPYAYGTLRSEHGVHRLVRI 198
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ + RQTSF+G EV P++ E S V I ++DL I R+ G GGQ VN ++AVRI
Sbjct: 199 SPFDNQNRRQTSFAGVEVTPVV-ELSDHVDIDDKDLRIDIFRSSGPGGQGVNTTDSAVRI 257
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH+PTG+ V C ERSQL NK A+ L+AKLL + A+E ++I G +G QI
Sbjct: 258 THLPTGIVVTCQNERSQLQNKAAAMIVLQAKLLERRRAEEAAEKQRITGGPQDVSFGSQI 317
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSM 371
RNYV HPY++VKD+RT ETS+ V+DGEL+ FI + ++++ S+
Sbjct: 318 RNYVLHPYQMVKDLRTDTETSNTSGVLDGELDDFIDAEIRWRRSV 362
>gi|406905686|gb|EKD47084.1| hypothetical protein ACD_66C00234G0002 [uncultured bacterium]
Length = 369
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 214/343 (62%), Gaps = 3/343 (0%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
++ + ELE++ + + FW+++ +A++ Q ++ K +I + ++ DA+ + KL +
Sbjct: 28 QERVHELEVQMSGADFWNDQEQAKQVSQEASERKAQIEVWQTLLIEIQDALDLSKLAQ-- 85
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D +A + E +L ++ EL LLSG D+ A++SI AGAGG+DA DWA ML
Sbjct: 86 DEQNAKVESEIEKTFNDLQSRYEKLELQILLSGEMDENNAILSIHAGAGGSDASDWAGML 145
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
RM+ R+ E Q ++T + E S EEAG KS ++GRYAYG L E G HR+VR SPF+
Sbjct: 146 TRMFTRFAESQDWETEIYESSPAEEAGYKSVSFSIKGRYAYGMLKSEAGVHRLVRISPFD 205
Query: 211 AKGLRQTSFSGAEVMPLLPEESM-DVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
A+ +R TSF+ EV+P L S +QI E+D+ + AGG GGQ VN +AVRITHI
Sbjct: 206 AEKMRHTSFALVEVIPELTGFSQASIQIDEKDIRVDTFMAGGHGGQGVNTTYSAVRITHI 265
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PT V C ERSQL NK A+ LK++L V +E+RA ++ Q++G WG QIR+Y
Sbjct: 266 PTNTVVTCQNERSQLQNKESAMRVLKSRLFVRMQEERAEKLDQLKGGHKSPAWGNQIRSY 325
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
V HPYK+VKD RT E D V+DG+L+PFI +YL+ + S S
Sbjct: 326 VLHPYKMVKDHRTDCEIQDAEKVLDGDLQPFIDAYLRKEVSES 368
>gi|421052306|ref|ZP_15515297.1| peptide chain release factor 2 [Pelosinus fermentans B4]
gi|421069109|ref|ZP_15530281.1| Peptide chain release factor 2 [Pelosinus fermentans A11]
gi|392443409|gb|EIW20950.1| peptide chain release factor 2 [Pelosinus fermentans B4]
gi|392450129|gb|EIW27182.1| Peptide chain release factor 2 [Pelosinus fermentans A11]
Length = 327
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/322 (44%), Positives = 209/322 (64%), Gaps = 5/322 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FWD+ +AQ+ Q L +KD + T +D + ++ M+ D + E +
Sbjct: 6 FWDDPDKAQKVAQELNVLKDGVAQFEQLSTAYEDLSLLWQMG--MEEKDESIYPEVLEAV 63
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++ K +++ E+ +LSG +D A++++ AGAGGT+AQDWA MLLRMYVRW EK YK
Sbjct: 64 DKMTKDIERLEVALMLSGEHDGSNAILTLHAGAGGTEAQDWAQMLLRMYVRWAEKNGYKV 123
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAG+KSA I V G AYGYL EKG HR+VR SPF+A G R TSF+ +VM
Sbjct: 124 ETMDFLAGDEAGVKSATILVSGINAYGYLKSEKGVHRLVRISPFDASGRRHTSFAAVDVM 183
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P + ++++D+ I D+ + RA G GGQ++NK ++AVR+TH+PTGV V+C +RSQ+
Sbjct: 184 PEI-DDNVDIDINMADVRVDTYRASGAGGQHINKTDSAVRMTHVPTGVVVQCQTQRSQIK 242
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIK-QIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
N+ + + L+AKL + E Q+ IK ++ GD EWG QIR+YVFHPY +VKD RT
Sbjct: 243 NREQCMKMLRAKLYEL-ERQKQENIKNELGGDYQAIEWGSQIRSYVFHPYNMVKDHRTNA 301
Query: 345 ETSDIVSVMDGELEPFIKSYLK 366
ET ++ + MDG+L FI++YLK
Sbjct: 302 ETGNVHAAMDGDLGLFIEAYLK 323
>gi|452943243|ref|YP_007499408.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
gi|452881661|gb|AGG14365.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
Length = 375
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 227/359 (63%), Gaps = 6/359 (1%)
Query: 17 RVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTK 76
R EE+ +S +++ KE+ + + ++ FW ++ +A+ Q ++DK+N T K++
Sbjct: 14 RFEELSSSIDEEKIRKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDKLNTYTSLKSR 73
Query: 77 MDDAVTIV-KLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
+ D +V +L EE T + EE ++ K+L K FEL LS D A ++I
Sbjct: 74 IKDLDEMVSELKEEDLDTTLLISEELEAVEKDLKK----FELETYLSDEMDINNAYLTIQ 129
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
AGAGGT+A DWA MLLRMY RW EK Y+ ++ + + + AGIKSA + ++G YAYGYL
Sbjct: 130 AGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLK 189
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
E G HR+VR SPF+A R TSF+ V+P + E+ ++++I EEDL I RA G GGQ
Sbjct: 190 SENGVHRLVRISPFDANARRHTSFASVLVVPEVNED-VNIEIKEEDLRIDTYRASGAGGQ 248
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
VNK +TAVRITHIPTG+ V C +ERSQ+ N+ KA+ LKA+L + ++ + K + G
Sbjct: 249 YVNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEG 308
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLS 374
WG +IR+Y+F P +LVKD+RTG E+ +I +VMDGE++ FI++YL+ K LS
Sbjct: 309 PKTDIGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYLRKKALNQLS 367
>gi|315655086|ref|ZP_07907988.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
gi|315490567|gb|EFU80190.1| peptide chain release factor RF2 [Mobiluncus curtisii ATCC 51333]
Length = 376
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 233/359 (64%), Gaps = 10/359 (2%)
Query: 18 VEEIRASAGL-------QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E++RAS + L +++A+L +AA WD++ AQ+ Q+L+ + + L
Sbjct: 11 IEKLRASFATISAVMDPELLTQKIADLTQQAAAPDLWDDQEHAQKVTQSLSAAQVDMQRL 70
Query: 71 TDFKTKMDDAVTIVKL-TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ ++DD +V+L EE +L +A + L + LD E+ LL+G YD+
Sbjct: 71 QKMRARIDDMEALVELGAEEAGEDRDAILADAEQTYETLKQDLDAMEVKTLLNGEYDERF 130
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I +GAGG DA D+A MLLRMY+R+ E+ Y T+V++ S EEAGIKS +V+ Y
Sbjct: 131 AVVTIRSGAGGVDAADFAQMLLRMYLRYCERHHYATKVLDTSYAEEAGIKSVTFQVDAPY 190
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG LS E GTHR+ R SPFNA G RQTSF+ EV+PL+ E + +++PE D++I R+
Sbjct: 191 AYGMLSVEAGTHRLARVSPFNAAGKRQTSFAAVEVIPLI-ETTDHIEVPESDIKIDVFRS 249
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVR+TH+PTG+ + +E+SQ+ N+ A+ L+++LL++ +Q +
Sbjct: 250 SGPGGQSVNTTDSAVRLTHLPTGIVISMQDEKSQIQNRAAAMRVLQSRLLMLRHQQEHDK 309
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
K++ GD VKA WG Q+R+Y + +LVKD+RTG+E+ + SV DG+L+ FI + ++++
Sbjct: 310 KKELAGD-VKASWGDQMRSYFLYGQQLVKDLRTGYESGNPDSVFDGDLDGFIDAAIRWR 367
>gi|406995378|gb|EKE14119.1| peptide chain release factor 2 [uncultured bacterium]
Length = 338
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 221/357 (61%), Gaps = 26/357 (7%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
DVE + + I + A L ++EL LE ++ ++SFW A ET++ +TD+K +I
Sbjct: 4 DVEQLKTKYQAILSKADLGGKKEELKTLETQSYEASFWSEPKSAGETMKKITDLKKEIE- 62
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
L + EEA +I +++E+ LSGPYD+ G
Sbjct: 63 ---------------DLEMMELLLEENQFEEAKELI-------NKYEVLFFLSGPYDQGG 100
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
V SI AG GGT+A DW+ ML RMY R+ E++ ++ ++ GEEAGIKS++I V G++
Sbjct: 101 VVFSIHAGQGGTEAMDWSSMLFRMYTRYFERKGWRFEEFDRVAGEEAGIKSSIINVYGKF 160
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL E G HR+VRQSPFNA LRQTSFS EV+P++ E ++ + ++++E F R+
Sbjct: 161 AYGYLKAEAGVHRLVRQSPFNADKLRQTSFSLVEVLPMI--EDKEISVRDDEVEWEFYRS 218
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
GG GGQNVNKV TAVR+TH +G+ V C ER Q N+ A+ L+AKL + +E++A
Sbjct: 219 GGHGGQNVNKVSTAVRLTHKSSGIIVTCQTERDQGKNRDSAMKILRAKLWKVEQEKKAKT 278
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
I + + + A WG QIR+YV HPYKL+KD+RT +E + I V+DGEL+ ++++YLK
Sbjct: 279 IAGFKTETM-ASWGHQIRSYVLHPYKLIKDLRTDYEETQIDKVLDGELDGYVEAYLK 334
>gi|184200580|ref|YP_001854787.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
gi|183580810|dbj|BAG29281.1| peptide chain release factor 2 [Kocuria rhizophila DC2201]
Length = 372
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 238/351 (67%), Gaps = 6/351 (1%)
Query: 19 EEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMD 78
+ + A + + L KE+ ELE +AA WDN EAQ+ L+ + K++ L ++++D
Sbjct: 18 DSVAAVSDAEMLLKEITELEQQAAAPDLWDNPDEAQKVTSQLSHKQSKVDRLRKIESRID 77
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
D +V+L E+ D D + +A+ + + KAL + E+ LL+G YD+ AV++I +GA
Sbjct: 78 DLEVMVELAEDED--DQETRDASATELTSIQKALSELEIQTLLAGEYDEREAVVTIRSGA 135
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A++L+RMY+RW E+ Y T+V++ S EEAG+KSA EV+ YA+G LS E
Sbjct: 136 GGVDAADFAEILMRMYLRWAERHGYPTKVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEA 195
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMD-VQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ ES D V+IPE +L++ R+ G GGQ+V
Sbjct: 196 GTHRLVRISPFDNQGRRQTSFAAVEVIPLI--ESDDTVEIPETELKVDVFRSSGPGGQSV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVR+THIPTG+ V E+SQ+ N+ AL L+++LL++ +E+ ++ K++ GD
Sbjct: 254 NTTDSAVRMTHIPTGIVVSMQNEKSQIQNRAAALRVLQSRLLLLRQEEADAKKKEMAGD- 312
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VKA WG Q+R+YV +PY++VKD+RT +E + SV DG ++ FI ++++
Sbjct: 313 VKASWGDQMRSYVLNPYQMVKDLRTNYEEGNPSSVFDGGIDSFIDEGIRWR 363
>gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21]
gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 371
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/355 (40%), Positives = 220/355 (61%), Gaps = 2/355 (0%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
VE ++R++++R S + ++ + ELE + FW++ AQ+ L++ T ++ + +
Sbjct: 9 VEELAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIW 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ D +++L E D L E A++ +L + Q E ++LSGP+D GA
Sbjct: 69 ESLDKQARDIQELIELGSE--EQDEATLAEVAAMNAQLETGVSQAEFRRMLSGPHDASGA 126
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
+SI +GAGGT++QDWA+MLLRMY+R+ EK+ +KT + + G+ AG+K V G +A
Sbjct: 127 FVSINSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFA 186
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YGYL E G HR+VR SPF++ R TSF+ A V P++ E+ ++++I E DL I R+
Sbjct: 187 YGYLKAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSS 246
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VN ++A+RITHIPTG V C ERSQ NK A+ L++KL + +R ++
Sbjct: 247 GAGGQHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKA 306
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
I G+ + WG QIR+YV HPYK+VKD+RTG E+ +V+DG L+ F+ YL
Sbjct: 307 SDIAGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYL 361
>gi|314933063|ref|ZP_07840429.1| peptide chain release factor 2 [Staphylococcus caprae C87]
gi|313654382|gb|EFS18138.1| peptide chain release factor 2 [Staphylococcus caprae C87]
Length = 333
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 206/325 (63%), Gaps = 2/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
AD FW+++++AQE + +K +N D ++DD +L +E D + EE
Sbjct: 3 ADPDFWNDQSKAQEIIDKNNALKSIVNGYRDLANEVDDMSATRELLQE--EYDEDMKEEL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
S + + +DQFEL LL GP+D A+ + GAGGT++QDWA MLLRMY R+ E+
Sbjct: 61 ESDVIQFKDKMDQFELQLLLDGPHDANNAIFELHPGAGGTESQDWASMLLRMYQRYCEQN 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+ V+ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 121 GFNVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V ER
Sbjct: 181 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 240
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL +++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQQKLDEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET + +VMDG++ PFI++YL+
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLR 325
>gi|304439754|ref|ZP_07399652.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371741|gb|EFM25349.1| peptide chain release factor RF2 [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 368
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/370 (42%), Positives = 226/370 (61%), Gaps = 9/370 (2%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q+ Y + ++ V + S + ++ +L +L K + FWD+ AQ+T++
Sbjct: 3 QNVYLDKTKLDEIESMVNSLIESMDIDGMKAKLRDLNDKQMEEGFWDDTESAQKTIKEFN 62
Query: 62 DVKDKI-NL--LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELT 118
KI NL LTD + + D + I+ EM+ + + +IK L K + F++
Sbjct: 63 HYNRKIENLKSLTDEISSLKDLLEIM----EMEGDYSSYKDFKDDLIK-LEKHAEDFKIA 117
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGI 178
LL+ YD ++ I AGAGGT+AQDWA MLLRMY R+ E++ + +++ +EAGI
Sbjct: 118 TLLNDKYDDNDVILQIHAGAGGTEAQDWASMLLRMYTRYCEQKGFSAEILDLQKEDEAGI 177
Query: 179 KSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIP 238
KSA + ++G YGYL GEKG HR+VR SPF++ R TSFS +V P L E+ DV I
Sbjct: 178 KSATLLIKGDSCYGYLKGEKGVHRLVRISPFDSNKRRHTSFSSVDVYPEL-EDVEDVDIK 236
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
EDL+I R+ G GGQ+VN ++AVRITHIPTGV V+C ERSQ+ N+ A+ LKAKL
Sbjct: 237 PEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVVQCQNERSQIQNRETAMKLLKAKL 296
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
+ +A+E++ I+ + G+ + WG QIR+YVF PY +VKD RT E D+ SVMDG L+
Sbjct: 297 ISLAQEEQKEAIEDLSGNYSQIAWGSQIRSYVFQPYTMVKDHRTNEEIGDVESVMDGNLD 356
Query: 359 PFIKSYLKYK 368
PFI +YL+ K
Sbjct: 357 PFINAYLQSK 366
>gi|404442032|ref|ZP_11007214.1| peptide chain release factor 2 [Mycobacterium vaccae ATCC 25954]
gi|403657659|gb|EJZ12425.1| peptide chain release factor 2 [Mycobacterium vaccae ATCC 25954]
Length = 371
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 219/340 (64%), Gaps = 3/340 (0%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L + +LE A+D WD++A AQ+ L+ ++++ L + + +++D + +L E
Sbjct: 28 LRGRIDQLEKDASDPQLWDDQARAQKVTSDLSHAQNELRRLEELRGRIEDLPVLYELASE 87
Query: 90 MDSTDAGLLEEAASIIK-ELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWAD 148
D E A +L + + E+ LLSG YD+ AV++I +GAGG DA DWA+
Sbjct: 88 EDGAGGAEALEEADAELAKLREDIAAMEVRTLLSGEYDEREAVVTIRSGAGGVDAADWAE 147
Query: 149 MLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSP 208
ML+RMY+RW E+ Y V + S EEAGIKSA V YAYG LS E+GTHR+VR SP
Sbjct: 148 MLMRMYIRWAEQHNYPVEVFDTSYAEEAGIKSATFAVHAPYAYGTLSVEQGTHRLVRISP 207
Query: 209 FNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITH 268
F+ + RQTSF+ EV+P++ E + + IPE DL + R+ G GGQ+VN ++AVR+TH
Sbjct: 208 FDNQSRRQTSFADVEVLPVV-ETTDHIDIPETDLRVDVYRSSGPGGQSVNTTDSAVRLTH 266
Query: 269 IPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRN 328
IPTG+ V C E+SQL NK+ A+ L+AKLL +E+ +E+ ++GD + WG Q+R+
Sbjct: 267 IPTGIVVTCQNEKSQLQNKVAAMRVLQAKLLARKKEEERAELDALKGDG-GSSWGNQMRS 325
Query: 329 YVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
YV HPY++VKD+RT +E + +V+DG+++ F+++ ++++
Sbjct: 326 YVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFLEAGIRWR 365
>gi|408401329|ref|YP_006859292.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417753647|ref|ZP_12401752.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417928881|ref|ZP_12572269.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|333769251|gb|EGL46388.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340766755|gb|EGR89281.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407967557|dbj|BAM60795.1| peptide chain release factor 2 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 331
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
Query: 37 LEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAG 96
+E + + FW++ AQ+ Q L ++K + + D+ +++ EE DS
Sbjct: 1 MEHQMTEPDFWNDNIAAQKISQKLNELKSTYETFHNMQELSDETELYLEMLEEDDSVKDD 60
Query: 97 LLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVR 156
L EA+ ++ L + L +E+T LLS PYD A++ I G+GGT+AQDWADML RMY R
Sbjct: 61 L--EAS--LETLGQILASYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWADMLFRMYTR 116
Query: 157 WGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQ 216
+G + +K ++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R
Sbjct: 117 FGNAKGFKVETLDYQAGDEAGIKSVTLSFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRH 176
Query: 217 TSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVR 276
TSF EVMP L +++++V I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V
Sbjct: 177 TSFVSVEVMPEL-DDTIEVDIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVA 235
Query: 277 CTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKL 336
T +R+Q N+ +A+ L+AKL + +E++A+E+ ++GD + WG QIR+YVF PY +
Sbjct: 236 STVDRTQYGNRDRAIKMLQAKLYQLEQEKKAAEVNALKGDKKEITWGSQIRSYVFTPYTM 295
Query: 337 VKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYS 370
VKD RT +E + + VMDG++E FI +YLK++ S
Sbjct: 296 VKDHRTNYEVAQVDKVMDGDIEGFIDAYLKWRMS 329
>gi|453077037|ref|ZP_21979799.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
gi|452760158|gb|EME18500.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
Length = 367
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/342 (40%), Positives = 224/342 (65%), Gaps = 5/342 (1%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
+++L + + ELE +AAD W+N+ AQ+ L+ + ++ + + ++++DD + +L
Sbjct: 25 IEELRRRIDELEHQAADPDLWNNQEHAQQVTSQLSHAQAELRRVEELRSRLDDMEVLYEL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
EE + + ++E A+ E+ +LSG YD+ A+++I +GAGG DA DW
Sbjct: 85 AEEDGAEAVADADAERHKLREDIAAM---EVKTMLSGDYDERDALVNIRSGAGGVDAADW 141
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW EK Y V + S EEAGIKSA V+ YAYG LS E GTHR+VR
Sbjct: 142 AEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGIKSATFAVKAPYAYGTLSIEMGTHRLVRI 201
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E + + I E D+ + R+ G GGQ+VN ++AVR+
Sbjct: 202 SPFDNQGRRQTSFAEVEVLPVV-ETTDHIDIDENDVRVDVYRSSGPGGQSVNTTDSAVRL 260
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
THIPTG+ V C E+SQL NK+ A+ L+AKLL ++ +E+ ++GD + WG Q+
Sbjct: 261 THIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRQEERAEMDALKGDG-GSSWGNQM 319
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
R+YV HPY++VKD+RT +E ++ +V+DG+++ FI+S ++++
Sbjct: 320 RSYVLHPYQMVKDLRTEYEVNNPSAVLDGDIDGFIESGIRWR 361
>gi|418581468|ref|ZP_13145549.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418891396|ref|ZP_13445513.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418897171|ref|ZP_13451244.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418900141|ref|ZP_13454200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418908547|ref|ZP_13462555.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG149]
gi|418916619|ref|ZP_13470580.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418922423|ref|ZP_13476340.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418981657|ref|ZP_13529372.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418985295|ref|ZP_13532984.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377705223|gb|EHT29531.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377707137|gb|EHT31431.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377707477|gb|EHT31770.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377711695|gb|EHT35924.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377732353|gb|EHT56404.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735746|gb|EHT59776.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377751124|gb|EHT75058.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377755886|gb|EHT79784.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG149]
gi|377761950|gb|EHT85819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 330
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/325 (41%), Positives = 209/325 (64%), Gaps = 2/325 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
A+ +FWDN+ +AQ+ + +K +N + ++DD L +E D + E+
Sbjct: 2 AEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ +D++EL LL GP+D A++ + GAGGT++QDWA+ML RMY R+ EK+
Sbjct: 60 EQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKK 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K + V+ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 120 GFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH P+G+ V ER
Sbjct: 180 CDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNER 239
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL + E++A E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 240 SQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 299
Query: 342 TGHETSDIVSVMDGELEPFIKSYLK 366
T ET + +VMDG++ PFI+SYL+
Sbjct: 300 TNEETGKVDAVMDGDIGPFIESYLR 324
>gi|445378412|ref|ZP_21426764.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5460]
gi|445392626|ref|ZP_21428488.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5461]
gi|444749549|gb|ELW74442.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5461]
gi|444749743|gb|ELW74627.1| peptide chain release factor 2 [Streptococcus thermophilus MTCC
5460]
Length = 326
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 214/323 (66%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + K D+ +++ EE DS E +
Sbjct: 6 FWNDNIAAQKTSQELNELKMKYETFNNMKELSDETELYLEMLEEDDSVQE----ELEETL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
++L+K + +E+T LLS PYD A++ I G+GGT+AQDWA+MLLRMY R+G + +K
Sbjct: 62 EKLDKIMTSYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWAEMLLRMYQRYGNAKGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
++ G+EAGIKS + EG AYG+L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 ETLDYQAGDEAGIKSVTLAFEGPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V+I ++D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVEIRDDDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RTG+E
Sbjct: 241 NRDRAMKMLQAKLYQMEQEKKAEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTGYE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDG++E FI +YLK++
Sbjct: 301 VAQVDKVMDGDIEGFIDAYLKWR 323
>gi|407002947|gb|EKE19587.1| hypothetical protein ACD_8C00135G0001 [uncultured bacterium]
Length = 306
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 145/306 (47%), Positives = 203/306 (66%), Gaps = 4/306 (1%)
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
++++I L + K+ + + I+ L E ++ +E+ E+ K D E LL
Sbjct: 1 MRNEIASLESLEKKVAELIEIISLFGETENEQHAEIEKQ---FAEIQKEFDALEFKSLLG 57
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YDK +++I +GAGG DAQDWA ML RMY++W EK +K +VE++ G EAGIKSA
Sbjct: 58 GEYDKSDVILAIRSGAGGVDAQDWAQMLERMYLKWSEKNGFKAVMVEETRGAEAGIKSAT 117
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
IE+ G YAYGYL E G HR+VR SPFN+ LRQTSF+ EV+P++ EE +V I DL
Sbjct: 118 IEISGAYAYGYLQSEAGVHRLVRLSPFNSDNLRQTSFAIVEVLPVI-EEISEVVISPTDL 176
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
I RA G GGQ+VN ++AVRITH PTGV V C ERSQL NK +A+ LKA++
Sbjct: 177 VIDTYRASGAGGQHVNTTDSAVRITHTPTGVVVTCQSERSQLQNKEQAMKVLKARIHQKY 236
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
E++ E +++RG+ AEWG QIR+YV HPYK+VKD RT HE+SD V++G+L+ F++
Sbjct: 237 LEKQKEEREKLRGEYKSAEWGSQIRSYVVHPYKMVKDHRTKHESSDPEKVLEGDLQDFME 296
Query: 363 SYLKYK 368
S+L+++
Sbjct: 297 SFLRWQ 302
>gi|239636633|ref|ZP_04677635.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
gi|239597988|gb|EEQ80483.1| peptide chain release factor 2 [Staphylococcus warneri L37603]
Length = 330
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 208/327 (63%), Gaps = 2/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ +FWD++ AQ+ + +K +N + + ++D V+L +E D + +E
Sbjct: 3 TEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEESVEDMSATVELLQE--EFDEDMKQEL 60
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ + E +D FEL LL GPYD A++ + GAGGT++QDW MLLRMY R+ E+
Sbjct: 61 ENNVVEFKAEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 120
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 121 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ER
Sbjct: 181 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 240
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 241 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 300
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET + +VMDG++ PFI++YL+++
Sbjct: 301 TNEETGKVDAVMDGDIGPFIEAYLRHQ 327
>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
Length = 371
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 232/364 (63%), Gaps = 11/364 (3%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E+ ++ + L +L + + ELE KA+D W+++A AQ+ L+ + ++
Sbjct: 8 DIESLETTLQTVEKVIDLDELRRRVDELEHKASDPELWNDQANAQQVTSQLSHAQSELRR 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIK-ELNKALDQFELTQLLSGPYDKE 128
+TD + ++DD + +L E + D E A + +L ++ E+ +LSG YD
Sbjct: 68 VTDLRQRLDDLPVLYELAEAEEGDDLAAALEDADADRAKLRGEIEAMEVKTMLSGEYDAR 127
Query: 129 GAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGR 188
A+++I AGAGG DA DWA+ML+RMY+RW EK Y V + S EEAG+KSA ++
Sbjct: 128 DALVNIRAGAGGVDAADWAEMLMRMYIRWAEKHGYGVEVYDTSYAEEAGLKSATFAIKTD 187
Query: 189 YAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSR 248
YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+P++ E + + + E ++ + R
Sbjct: 188 YAYGTLSVEMGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-ETTDHIDVDENEVRVDVYR 246
Query: 249 AGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRAS 308
+ G GGQ+VN ++AVR+THIPTG+ V C E+SQL NK+ A+ L+AKLL E +R
Sbjct: 247 SSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQAKLL---ERKRQE 303
Query: 309 EIKQIRGDAVK----AEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
E Q+ DA+K A WG Q+R+YV HPY++VKD+RT +E ++ +V+DG+L+ FI++
Sbjct: 304 ERAQM--DALKTTEGASWGNQMRSYVLHPYQMVKDLRTNYEVNNPSAVLDGDLDGFIEAG 361
Query: 365 LKYK 368
++++
Sbjct: 362 IRWR 365
>gi|373471242|ref|ZP_09562304.1| peptide chain release factor 2 [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371760786|gb|EHO49457.1| peptide chain release factor 2 [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 337
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 203/324 (62%), Gaps = 3/324 (0%)
Query: 45 SFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASI 104
+FWD+ E+ + ++ +KD + K++ +D ++++ E D L+ E +
Sbjct: 5 TFWDDPKESTKIVREAKQLKDTVEKYNKLKSEYEDIGVLIEMGYE--ENDESLIPEIEGM 62
Query: 105 IKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYK 164
++ K +D+ ++ LL+G YD A++ + AGAGGT++ DW ML RMY RW + Y
Sbjct: 63 LEAFTKEIDELKIATLLTGEYDSSNAIMKLNAGAGGTESCDWCSMLYRMYTRWAAAEGYS 122
Query: 165 TRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEV 224
+++ G+EAGIKS +++ G AYGYL E G HR+VR SPFNA G RQTSF ++
Sbjct: 123 VEILDMLEGDEAGIKSVTLQINGLNAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSCDI 182
Query: 225 MPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQL 284
MP + EE +DV I +DL I R+ G GGQ++NK +A+RITHIPTGV V+C ERSQ
Sbjct: 183 MPDI-EEDLDVDINPDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGVVVQCQNERSQF 241
Query: 285 ANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGH 344
NK KA+ LKAKL ++ ++ ++ IRGD WG QIR+YV PY +VKD TG
Sbjct: 242 QNKDKAMQMLKAKLFLLKQQANVEKLSDIRGDVKDIGWGNQIRSYVMQPYTMVKDHGTGA 301
Query: 345 ETSDIVSVMDGELEPFIKSYLKYK 368
E+ ++ +V+DG+++ FI +YL ++
Sbjct: 302 ESGNVSAVLDGDIDKFIIAYLTWQ 325
>gi|77413702|ref|ZP_00789885.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
gi|77160247|gb|EAO71375.1| peptide chain release factor 2 [Streptococcus agalactiae 515]
Length = 326
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 140/323 (43%), Positives = 211/323 (65%), Gaps = 5/323 (1%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASII 105
FW++ AQ+T Q L ++K K + + + D+ ++++ +E DS L EE +
Sbjct: 6 FWNDNIAAQKTSQELNELKGKYDTFHNMQELSDETELLLEMLDEDDS----LKEELEENL 61
Query: 106 KELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKT 165
+L+K + +E+T LLS PYD A++ I G+GGT+AQDW D+LLRMY R+G +K
Sbjct: 62 MQLDKIMGAYEMTLLLSEPYDHNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKV 121
Query: 166 RVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVM 225
V++ G+EAGIKS + EG AYG L E G HR+VR SPF++ R TSF+ EVM
Sbjct: 122 EVLDYQAGDEAGIKSVTLSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVM 181
Query: 226 PLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLA 285
P L +++++V++ + D+++ R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q
Sbjct: 182 PEL-DDTIEVEVRDYDIKMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYG 240
Query: 286 NKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHE 345
N+ +A+ L+AKL + +E++A E+ ++GD + WG QIR+YVF PY +VKD RT E
Sbjct: 241 NRDRAMKMLQAKLYQLEQEKKAQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFE 300
Query: 346 TSDIVSVMDGELEPFIKSYLKYK 368
+ + VMDGE+ FI +YLK++
Sbjct: 301 LAQVDKVMDGEINGFIDAYLKWR 323
>gi|390563062|ref|ZP_10245205.1| Peptide chain release factor 2 (RF-2) [Nitrolancetus hollandicus
Lb]
gi|390172370|emb|CCF84525.1| Peptide chain release factor 2 (RF-2) [Nitrolancetus hollandicus
Lb]
Length = 344
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 219/336 (65%), Gaps = 5/336 (1%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
++E+ ELE+ + D +FW++ AQ ++ L+ ++ +++ + D + +L E
Sbjct: 5 QREIQELELASVDPNFWNDAQAAQRVMRRLSGLRGQVDRWDGLSRQAADLQELTELAGED 64
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
+S A + EE A I+ L++ + LT GPYD A++++ AG GG DAQDWA+ML
Sbjct: 65 ESLLAEISEETARILDSLSQLELELLLT----GPYDDSDAILAVHAGTGGVDAQDWAEML 120
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY+RW + ++T+V++ + GEEAGIKSA IE+ G AYGY E GTHR+VR SPF+
Sbjct: 121 LRMYLRWAGRSGFQTQVLDVTEGEEAGIKSATIEIRGANAYGYAKAEAGTHRLVRLSPFD 180
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
A R T+F+ EV+P + EE DV+I ++DL + R+ G GGQ+VNK ++AVRITH+P
Sbjct: 181 AAHRRHTAFALVEVLPQV-EEGADVEIRDDDLRVDTYRSSGAGGQHVNKTDSAVRITHLP 239
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TG+ V C ERSQ N+ A+ L+A+L +A +R E +++GD V + WG +IR+YV
Sbjct: 240 TGIVVTCQNERSQTQNRETAMKILRARLTELAIREREEEQSKLKGDHVASGWGNRIRSYV 299
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
PY +V D RT T ++ SV++GE+EPFI++YL
Sbjct: 300 LQPYTMVTDHRTEFSTGNVQSVLEGEIEPFIEAYLH 335
>gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5]
gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5]
Length = 367
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 220/358 (61%), Gaps = 5/358 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
++A ++VE R + E+ LAEL D + W++ +AQ L+ +KD +
Sbjct: 9 IDAMEEKVEFFRRCLDVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKDALADF 68
Query: 71 TDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGA 130
+ ++D VK+ E D ++E + +L K + +ELT LLS +D A
Sbjct: 69 NEIHRLLED----VKVLHEFCQEDESNVDELTQNLAKLEKLVADYELTVLLSDEHDPSNA 124
Query: 131 VISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYA 190
++I AGAGGT++QDW ML+RMY RW EK+++K ++E GEEAGIKS + +EG YA
Sbjct: 125 YLTINAGAGGTESQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEGLYA 184
Query: 191 YGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAG 250
YG L E G HR+VR SPF++ R TSF+ V P + ++S++V I E DL I R+
Sbjct: 185 YGNLKSETGVHRLVRISPFDSNARRHTSFTSVFVSPEI-DDSIEVDIRESDLRIDTYRSS 243
Query: 251 GKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEI 310
G GGQ+VN ++AVRITH PTGV +C ERSQ NK +A+ L+AKL + E++ +
Sbjct: 244 GAGGQHVNTTDSAVRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKRQGL 303
Query: 311 KQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+++ + WG QIR+YV HPYK+VKD+RT HET + +V+DG L+ FIK+YL+++
Sbjct: 304 REVEDSKMDIAWGSQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYLQWQ 361
>gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
33030]
gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
33030]
Length = 364
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 144/346 (41%), Positives = 222/346 (64%), Gaps = 7/346 (2%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L +++ ELE +AAD S WD+ AQ L+ V+ ++ + + ++DD + +L
Sbjct: 25 LDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQARVRRVRSLRQRIDDLPVMYEL 84
Query: 87 TEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDW 146
E D L E+ + +L A++ E+T +LSG YD+ AV++I +GAGG DA DW
Sbjct: 85 AAE--EGDYTLAEDE---LADLTTAVETLEVTTMLSGEYDQREAVVNIRSGAGGVDAADW 139
Query: 147 ADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQ 206
A+ML+RMY+RW EK +K V + S EEAGIKSA V G Y YG LS E+G HR+VR
Sbjct: 140 AEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLSVEQGAHRLVRI 199
Query: 207 SPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRI 266
SPF+ +G RQTSF+ EV+P++ E++ + IP+ ++ I R+ G GGQ+VN ++AVRI
Sbjct: 200 SPFDNQGRRQTSFAEVEVLPVV-EKTDHIDIPDSEIRIDVYRSSGPGGQSVNTTDSAVRI 258
Query: 267 THIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQI 326
TH PTG+ V C E+SQ+ NK A++ L++KLL ++ +E+ + G A WG Q+
Sbjct: 259 THEPTGIVVTCQNEKSQIQNKASAMNVLQSKLLERKRQEEKAELDAL-GAGGNASWGNQM 317
Query: 327 RNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
R+YV HPY++VKD+RT +E D V+DG+++ F++S ++++ + S
Sbjct: 318 RSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLESGIRWRSTES 363
>gi|410452445|ref|ZP_11306434.1| peptide chain release factor 2 [Bacillus bataviensis LMG 21833]
gi|409934490|gb|EKN71375.1| peptide chain release factor 2 [Bacillus bataviensis LMG 21833]
Length = 327
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 213/327 (65%), Gaps = 7/327 (2%)
Query: 46 FWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLEEAAS 103
FW+++ +AQ + +KD++N T+ + D+ ++LT E+ + D L E
Sbjct: 6 FWNDQEKAQLVISESNGLKDQVNEFTE----LSDSYENLELTYELVKEENDEELRAELEE 61
Query: 104 IIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRY 163
+++L + L QFEL LLS YDK A++ + GAGGT++QDW MLLRMY RW EK+ +
Sbjct: 62 ELQQLTERLSQFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121
Query: 164 KTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAE 223
K ++ G+EAGIKS + ++G AYGYL EKG HR+VR SPF++ G R TSF E
Sbjct: 122 KVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCE 181
Query: 224 VMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQ 283
V+P L ++ + +++ EDL+I RA G GGQ++N ++A+RITH+PT V V C ERSQ
Sbjct: 182 VIPELNDD-IQIEVRTEDLKIDTYRATGAGGQHINTTDSAIRITHLPTNVVVTCQAERSQ 240
Query: 284 LANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTG 343
+ N+ AL LKAKL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT
Sbjct: 241 IKNREAALKMLKAKLYQLEIERKEQELLEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTS 300
Query: 344 HETSDIVSVMDGELEPFIKSYLKYKYS 370
E+ ++ +VMDG+L+ FI +YL+ + S
Sbjct: 301 TESGNVQAVMDGDLDQFINAYLRSRIS 327
>gi|445060263|ref|YP_007385667.1| peptide chain release factor 2 [Staphylococcus warneri SG1]
gi|443426320|gb|AGC91223.1| peptide chain release factor 2 [Staphylococcus warneri SG1]
Length = 329
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 208/327 (63%), Gaps = 2/327 (0%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEA 101
+ +FWD++ AQ+ + +K +N + + ++D V+L +E D + +E
Sbjct: 2 TEPNFWDDQNRAQDIIDKNNALKSMVNGYYELEETVEDMSATVELLQE--EFDEDMKQEL 59
Query: 102 ASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQ 161
+ + E +D FEL LL GPYD A++ + GAGGT++QDW MLLRMY R+ E+
Sbjct: 60 ENNVIEFKSEIDHFELQLLLDGPYDANNAILELHPGAGGTESQDWVSMLLRMYQRYCEQS 119
Query: 162 RYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSG 221
+K V+ G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF+
Sbjct: 120 GFKVETVDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFAS 179
Query: 222 AEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEER 281
+V+P + ++++I +D+ + RA G GGQ++NK E+A+RITH PTG+ V ER
Sbjct: 180 CDVIPDFDNDEIEIEINSDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNER 239
Query: 282 SQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVR 341
SQ+ N+ A+ LK+KL + E++ E+ +IRG+ + WG QIR+YVFHPY +VKD R
Sbjct: 240 SQIKNREAAMKMLKSKLYQLKLEEQEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 299
Query: 342 TGHETSDIVSVMDGELEPFIKSYLKYK 368
T ET + +VMDG++ PFI++YL+++
Sbjct: 300 TNEETGKVDAVMDGDIGPFIEAYLRHQ 326
>gi|427414371|ref|ZP_18904561.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
gi|425714747|gb|EKU77750.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
Length = 330
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/334 (42%), Positives = 218/334 (65%), Gaps = 7/334 (2%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM--DSTDAGLLE 99
+D FW++ A+E Q T +KD + ++++D +KL EM D D +
Sbjct: 2 SDPEFWNDPDSAKEISQEATQLKDAVEGYKALVSEIED----LKLMLEMAIDEQDVSMES 57
Query: 100 EAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGE 159
E + ++ + + +++ E+ LLSG YD A+++ AGAGGT+AQDW ML+RMY+RW E
Sbjct: 58 ELKTSVEHITEEVERREVLLLLSGEYDTNNAILTFHAGAGGTEAQDWVSMLIRMYLRWAE 117
Query: 160 KQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSF 219
+ + ++++ G+EAGIKSA ++G A+GYL EKG HR+VR SPF+A R TSF
Sbjct: 118 QHGFAITMMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDANARRHTSF 177
Query: 220 SGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTE 279
+ +VMP + ++++D+ + +D+ + RA G GGQ++NK ++A+R+THIPTGV V+C
Sbjct: 178 AAVDVMPEI-DDTVDIHLDMKDVRVDTYRASGAGGQHINKTDSAIRMTHIPTGVVVQCQS 236
Query: 280 ERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKD 339
ERSQ+ N+ +AL L+AKL + E++A ++I G EWG QIR+YVFHPY LVKD
Sbjct: 237 ERSQIQNREQALKLLRAKLFELELEKQAELKEKIGGTYQAIEWGSQIRSYVFHPYNLVKD 296
Query: 340 VRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSL 373
RTG ET +I SVMDG L+ F++ YLK + ++ +
Sbjct: 297 HRTGVETGNIQSVMDGNLDAFMEGYLKKEANLKI 330
>gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 371
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 236/370 (63%), Gaps = 9/370 (2%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
Q+ Y ++ +E + + + S + L++++ EL K + FWD+ AQ+ ++
Sbjct: 3 QNIYLDKERLENSKLTTKSLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRETN 62
Query: 62 DVKDKINL---LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELT 118
+ KI+ L D T +D + ++++ E+ S + ++ E+ K +F+L
Sbjct: 63 SYQRKIDQYDKLIDLITDAEDLIALMEIEEDYSS-----YSDFQELVDEIEKDTAEFKLN 117
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGI 178
LL+G YD A++SI AGAGGT+AQDWA MLLRMY R+ E + +K ++ +EAGI
Sbjct: 118 TLLNGEYDSHDAILSIHAGAGGTEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGI 177
Query: 179 KSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIP 238
KS +++ G AYGYL GEKG HR+VR SPF++ R TSFS +V P + +++ +V+I
Sbjct: 178 KSVTLKISGDNAYGYLKGEKGVHRLVRISPFDSNKRRHTSFSSVDVFPEIDDDT-EVEIK 236
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
+E+L+I R+ G GGQ+VN ++AVRITHIPTG+ V+C ERSQ+ N+ KA++ LKAKL
Sbjct: 237 DEELKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKL 296
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
+ +AEE++ +I+ ++G+ + WG QIR+YVF PY +VKD RT + D+ VMDG+L+
Sbjct: 297 VALAEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLD 356
Query: 359 PFIKSYLKYK 368
FI +YL+ K
Sbjct: 357 IFINAYLQDK 366
>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
gi|81717933|sp|Q82D82.1|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
MA-4680]
Length = 368
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 235/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDKLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLSVLFEMAEEEDDPDTRA--EAESELTAVKKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E++ YKT + E S EEAGIKS V
Sbjct: 123 DSREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQRGYKTEIYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E + ++I E +L +
Sbjct: 183 QVPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-ETTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+TH+PTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQAKLLDRRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT +E + +V +GE+E F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEYEVGNPEAVFNGEIEGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
>gi|269218746|ref|ZP_06162600.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211857|gb|EEZ78197.1| peptide chain release factor 2 [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 378
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 234/366 (63%), Gaps = 12/366 (3%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
++EA ++I + + + L + +AEL +A WD++ +AQ L+ + +++
Sbjct: 8 EIEALRKTFQQISSVSNPEGLRERIAELTEASAAPDLWDDQDKAQSVTSKLSHAQAELDK 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQ-------FELTQLLS 122
+ +DD T+ ++ +E +D E AA + +L + L Q E+ LLS
Sbjct: 68 INAMSAALDDLETLKEMADEEAGSDP---ETAAELYSDLERELGQVGADMSELEIRTLLS 124
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD+ AV++I +GAGG DA D+A +L RMY+RW E++ Y +V++ S EEAGIKS
Sbjct: 125 GKYDEREAVVTIRSGAGGVDAADFAQILQRMYLRWAERRGYSAKVLDTSYAEEAGIKSTT 184
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
EV YAYG LS E GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + +PE D+
Sbjct: 185 FEVSAPYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDHIDVPEADI 243
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
+ R+ G GGQ+VN ++AVRITHIPTG+ V +E+SQ+ N+ A+ L+++LL++
Sbjct: 244 RVDVFRSSGPGGQSVNTTDSAVRITHIPTGIVVSMQDEKSQIQNRAAAMRVLQSRLLLLK 303
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+E+ A E K++ GD +KA WG Q+R+YV PY++VKD+RTG+E + +V DG+++ FI
Sbjct: 304 QEEEAREKKELAGD-IKASWGDQMRSYVLQPYQMVKDLRTGYEAGNPEAVFDGDIDGFID 362
Query: 363 SYLKYK 368
+ ++++
Sbjct: 363 AGIRWR 368
>gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
gi|158433669|gb|EDP11958.1| peptide chain release factor 2 [Eubacterium dolichum DSM 3991]
Length = 346
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 149/343 (43%), Positives = 212/343 (61%), Gaps = 9/343 (2%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKIN---LLTDFKTKMDDAVTI 83
L + + ++ EL + + SFW + AQ +Q L +KD + L M++ +T+
Sbjct: 6 LAEKKHKIEELTARTMEESFWSDPQHAQTLIQQLNGLKDVVESYEQLDHALAGMEETLTL 65
Query: 84 VKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDA 143
+K D D + E E+ + +QFEL LLS YD A++ + GAGGT++
Sbjct: 66 LK-----DDFDTEIFELLEMEYHEMEERFEQFELKMLLSHEYDHSNAILELHPGAGGTES 120
Query: 144 QDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRI 203
DWADML RMY RW EK+ YK V++ G+EAGIKS VEG AYGYL EKG HR+
Sbjct: 121 CDWADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRL 180
Query: 204 VRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETA 263
VR SPF++ G R TSF+ +VMP +E ++++I EDL + RA G GGQ++NK ++A
Sbjct: 181 VRISPFDSGGRRHTSFASLDVMPQFNDE-IEIEIRPEDLIVETKRASGAGGQHINKTDSA 239
Query: 264 VRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWG 323
+R+ H PTG+ C RSQ N+ +AL LK+++ E++ ++I +I+G+ EWG
Sbjct: 240 IRMVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANEWG 299
Query: 324 QQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
QIR+YVFHPY +VKD RTG+ETSD SVMDG L+ FI +YLK
Sbjct: 300 SQIRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYLK 342
>gi|404216093|ref|YP_006670288.1| Protein chain release factor B [Gordonia sp. KTR9]
gi|403646892|gb|AFR50132.1| Protein chain release factor B [Gordonia sp. KTR9]
Length = 371
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 226/347 (65%), Gaps = 3/347 (0%)
Query: 27 LQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKL 86
L++L + + ELEM+A+D W+++ AQ+ L+ + ++ +++ + +++D + +L
Sbjct: 25 LEELRRRIDELEMQASDPDLWNDQDHAQKVTSELSHAQSELRKVSELRQRLEDLPVLYEL 84
Query: 87 TEEMDSTD-AGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQD 145
E + D L +A S + L + E+ +L+G YD AV++I +GAGG DA D
Sbjct: 85 AEAEEGDDKVTALADADSERESLRTDIQAMEVKTMLAGEYDSRDAVVNIRSGAGGVDAAD 144
Query: 146 WADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVR 205
WA ML+RMY+RW E++ Y V + S EEAG+KSA V+ Y YG LS E+GTHR+VR
Sbjct: 145 WAQMLMRMYIRWAEQKGYGVEVYDTSYAEEAGLKSATFAVKAPYMYGTLSVEQGTHRLVR 204
Query: 206 QSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVR 265
SPF+ + RQTSF+ EV+P++ E + + + E D+++ R+ G GGQ+VN ++AVR
Sbjct: 205 ISPFDNQSRRQTSFAEVEVLPVV-ETTDHIDVDENDIKVDVYRSSGPGGQSVNTTDSAVR 263
Query: 266 ITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQ 325
+THIPTG+ V C E+SQL NK A+ L+AKLL ++ +E+ ++GD + WG Q
Sbjct: 264 LTHIPTGIVVTCQNEKSQLQNKASAMRVLQAKLLDRKRQEERAELDALKGDG-GSSWGNQ 322
Query: 326 IRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMS 372
+R+YV HPY++VKD+RTG E ++ SV+DGEL+ FI++ ++++ + +
Sbjct: 323 MRSYVLHPYQMVKDLRTGVEDNNPASVLDGELDKFIEAGIRWRMATA 369
>gi|414161420|ref|ZP_11417680.1| peptide chain release factor 2 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876316|gb|EKS24227.1| peptide chain release factor 2 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 332
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 141/326 (43%), Positives = 204/326 (62%), Gaps = 4/326 (1%)
Query: 42 ADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA-VTIVKLTEEMDSTDAGLLEE 100
+ +FWD++ +AQE + +K + D + +++D T L EE D LEE
Sbjct: 2 TEPTFWDDQNKAQEIIDKNNALKSVVQGYRDLEAEIEDMNATHELLQEEYDEDLKADLEE 61
Query: 101 AASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEK 160
K LD+FEL LL+GPYD A++ + GAGGT++QDWA MLLRMY R+ E
Sbjct: 62 ETVNFK---SKLDEFELQLLLNGPYDDNNAILELHPGAGGTESQDWASMLLRMYQRYAED 118
Query: 161 QRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFS 220
+ +K V + G+EAG+KS + ++G AYGYL EKG HR+VR SPF++ G R TSF
Sbjct: 119 KNFKVEVADYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFV 178
Query: 221 GAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEE 280
+V+P +++ I +D+ + RA G GGQ++NK E+A+RITH PTG+ V E
Sbjct: 179 SCDVIPEFNNNEIEIDINPDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNE 238
Query: 281 RSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDV 340
RSQ+ N+ A+ LK+KL + E++ E+ +IRG+ WG QIR+YVFHPY +VKD
Sbjct: 239 RSQIKNREAAMKMLKSKLYQLKLEEQEKEMAEIRGEQKDIGWGSQIRSYVFHPYSMVKDH 298
Query: 341 RTGHETSDIVSVMDGELEPFIKSYLK 366
RT ET ++ +VMDGE+ PFI++YL+
Sbjct: 299 RTNEETGNVNAVMDGEIGPFIEAYLR 324
>gi|402838400|ref|ZP_10886907.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
gi|402272877|gb|EJU22088.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
Length = 344
Score = 287 bits (734), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 207/335 (61%), Gaps = 7/335 (2%)
Query: 31 EKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEEM 90
+ E+ + E+ A D FW++R AQ+ L+ ++ K+ +K++D + +L E
Sbjct: 12 QDEILKEEINAQD--FWNDRENAQKILKKSKQIQTKLESYNTASSKLEDLEVLFELATE- 68
Query: 91 DSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADML 150
D L EE I ++ + Q L LLSG YD A++S+ +G GG DAQDW ML
Sbjct: 69 ---DENLEEELIKEIDDVQADIKQLSLQVLLSGEYDANNAILSVHSGTGGLDAQDWTQML 125
Query: 151 LRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFN 210
LRMY R+ + +K ++ EAGIKSA + +EG AYGYL EKG HR+VR SPF+
Sbjct: 126 LRMYTRFAQNMGFKIYYIDIQQDPEAGIKSATLHIEGDNAYGYLKCEKGVHRLVRISPFD 185
Query: 211 AKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIP 270
+ G R TSF+ +V+P L ++S+ + I +DL+I R+ G GGQ+VNK E+A+RITHIP
Sbjct: 186 SSGKRHTSFASVDVLPEL-DDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIP 244
Query: 271 TGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYV 330
TGV V+C ERSQ +NK A+ L AKL+ + E + +I+ I+G WG QIR+YV
Sbjct: 245 TGVVVQCQNERSQFSNKDTAMKMLMAKLIELKELEHKDKIEDIQGKYSLIAWGSQIRSYV 304
Query: 331 FHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
F PY +VKD RT E +I SVMDG++ PFI SYL
Sbjct: 305 FQPYTMVKDHRTNFEIGNITSVMDGDIMPFINSYL 339
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.129 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,400,559,746
Number of Sequences: 23463169
Number of extensions: 216547035
Number of successful extensions: 642345
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9040
Number of HSP's successfully gapped in prelim test: 532
Number of HSP's that attempted gapping in prelim test: 619082
Number of HSP's gapped (non-prelim): 10347
length of query: 379
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 235
effective length of database: 8,980,499,031
effective search space: 2110417272285
effective search space used: 2110417272285
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 78 (34.7 bits)