BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017009
(379 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P74476|RF2_SYNY3 Peptide chain release factor 2 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=prfB PE=3 SV=2
Length = 372
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 211/367 (57%), Positives = 275/367 (74%), Gaps = 2/367 (0%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
+ + +L++++E S R+ + + L L+ ++ +LE AA FWD+ +AQ+ LQ L
Sbjct: 2 ITELTDLKRNLELISSRLGQTQDYLDLPGLKAKVQDLEQCAAQPDFWDDTDQAQQILQTL 61
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
+ K ++ ++ + D+ IV+L E D D LL EA + +++L K LD++EL QL
Sbjct: 62 NETKSQLEQWGIWQQQWQDSQAIVELLELED--DQALLTEAETTLEQLQKELDRWELQQL 119
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
LSGPYD +GA ++I AGAGGTDAQDWA+MLLRMY RW EKQ YK + E S G+EAG+KS
Sbjct: 120 LSGPYDAKGATLTINAGAGGTDAQDWAEMLLRMYTRWSEKQGYKVHLAEISEGDEAGLKS 179
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
+E+EGRYAYGYL EKGTHR+VR SPFNA G RQTSF+G EVMPLL EE++ + IP++
Sbjct: 180 VTLEIEGRYAYGYLKSEKGTHRLVRISPFNANGKRQTSFAGVEVMPLLGEEAISLDIPDK 239
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL+IS SRAGGKGGQNVNKVETAVRI H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+
Sbjct: 240 DLDISTSRAGGKGGQNVNKVETAVRIVHLPTGLAVRCTQERSQLQNKEKALAILKAKLLI 299
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ EEQRA I +IRGD V+A WG QIRNYVFHPY+LVKD+RT ET+D+ VMDGEL F
Sbjct: 300 VLEEQRAQAIAEIRGDMVEAAWGTQIRNYVFHPYQLVKDLRTNVETTDVGGVMDGELSDF 359
Query: 361 IKSYLKY 367
I++YL++
Sbjct: 360 IEAYLRH 366
>sp|B7K0A6|RF2_CYAP8 Peptide chain release factor 2 OS=Cyanothece sp. (strain PCC 8801)
GN=prfB PE=3 SV=1
Length = 365
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/360 (58%), Positives = 273/360 (75%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+++++ + R+ + + L L + +LE AA FWDN+ AQ+TLQ L D+K
Sbjct: 6 LKREIQQIAARLGKTQDYLDLPALNANIQDLEQIAAQPDFWDNQETAQKTLQQLNDLKSS 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + +++D I +L E + DA L EEA + + +LN LD++EL +LLSG YD
Sbjct: 66 VEEYHQWMGQLEDLKAIAELLELEE--DATLNEEAEANLTQLNHELDRWELQRLLSGIYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+GAV++I AGAGGTDAQDWA+MLLRMY RWGE+Q YK + E S G+EAGIKSA +E+E
Sbjct: 124 SKGAVLTINAGAGGTDAQDWAEMLLRMYTRWGEQQGYKVHLTEISEGDEAGIKSATLEIE 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GRYAYGYL GEKGTHR+VR SPFNA G RQTSF+G EVMP L EE + V+IPE+DLEI+
Sbjct: 184 GRYAYGYLKGEKGTHRLVRISPFNANGKRQTSFAGIEVMPALEEEDLKVEIPEKDLEITT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
+R+GGKGGQNVNKVETAVR+ H+PTG+ VRCT+ERSQL NK KAL+ LKAKLL+IA+EQR
Sbjct: 244 TRSGGKGGQNVNKVETAVRVVHLPTGIAVRCTQERSQLQNKEKALALLKAKLLIIAQEQR 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A I +IRGD V+A WG QIRNYVFHPY++VKDVRT ET+D+ VMDG+L+ FI+SYL+
Sbjct: 304 AQAIAEIRGDMVEAAWGNQIRNYVFHPYQMVKDVRTNTETTDVNGVMDGKLDLFIESYLR 363
>sp|Q7U3W6|RF2_SYNPX Peptide chain release factor 2 OS=Synechococcus sp. (strain WH8102)
GN=prfB PE=3 SV=1
Length = 374
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/364 (57%), Positives = 264/364 (72%), Gaps = 3/364 (0%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D + ++D+ +DR+ + + L+ +LE AA FWD++ AQ+ ++ L +
Sbjct: 2 DLTDFKRDLSELTDRLGHAQDCLDVPALKARQQDLEQLAAQPDFWDDQQAAQKQMRRLDE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
VK ++ L D+ +DDA ++L E D +L EA + +L + LD++EL +LLS
Sbjct: 62 VKAQLQQLADWGGAVDDAKATLELYEL--EPDEEMLTEAQEGLNQLRQGLDRWELERLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YDKEGAV++I AGAGGTDAQDWA MLLRMY RW E K V E S GEEAGIKS
Sbjct: 120 GDYDKEGAVLTINAGAGGTDAQDWAQMLLRMYTRWAEDHGMKVTVDELSEGEEAGIKSCT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
IEVEGRYAYGYL EKGTHR+VR SPFNA RQTSF+G EVMP + EE +D+ IPE+DL
Sbjct: 180 IEVEGRYAYGYLRNEKGTHRLVRISPFNANDKRQTSFAGIEVMPKIDEE-VDIDIPEKDL 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
E++ SR+GG GGQNVNKVETAVRI HIPTG+ VRCT+ERSQL NK KA++ LKAKLLVIA
Sbjct: 239 EVTTSRSGGAGGQNVNKVETAVRILHIPTGLAVRCTQERSQLQNKEKAMALLKAKLLVIA 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+EQRA+EI IRGD V+A WG QIRNYVFHPY++VKD+RT ET+D+ +VMDG L+PFI
Sbjct: 299 QEQRAAEIADIRGDIVEAAWGNQIRNYVFHPYQMVKDLRTSEETNDVQAVMDGALDPFID 358
Query: 363 SYLK 366
+ L+
Sbjct: 359 ASLR 362
>sp|Q0TNE1|RF2_CLOP1 Peptide chain release factor 2 OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=prfB PE=3 SV=2
Length = 362
Score = 332 bits (850), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/350 (46%), Positives = 231/350 (66%), Gaps = 4/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 15 NNLKEMGASLCLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 74
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 75 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLH 131
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G GG+DA DW +MLLRMY RW EK+ Y ++ G+EAG+KS ++V+G +AYGYL
Sbjct: 132 TGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLK 191
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR+VR SPFNA G RQTSF+ EV+P L + D++I DL I RAGG GGQ
Sbjct: 192 AEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQ 250
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G
Sbjct: 251 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 310
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVFHPY +VKD RT ETS++ VMDG+++ FI +YL
Sbjct: 311 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMDGDIDNFIIAYL 360
>sp|O67695|RF2_AQUAE Peptide chain release factor 2 OS=Aquifex aeolicus (strain VF5)
GN=prfB PE=3 SV=1
Length = 373
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/362 (46%), Positives = 243/362 (67%), Gaps = 4/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L+ VE R+E+++ ++LE EL EL+ K ++ +FW+++ +A++ +Q V++
Sbjct: 6 LKGKVEELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N L + + + D +V++T E D+ +++E IKE+ + L + EL LSG D
Sbjct: 66 LNKLKNLEKSVKDLEELVEITSEEDTETWAMMDEE---IKEVERTLRELELKTYLSGEMD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
+ A ++I AGAGGT+A DWADML RMY RW EK+ Y+ +++ + + AGIKS + V+
Sbjct: 123 AKNAYLTIQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVK 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGYL GE+G HR+VR SPF+A R TSF+ VMP + +E + ++I EDL+I
Sbjct: 183 GPYAYGYLKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQI-DEDIKIEIKPEDLKIET 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ VNK +TAVRITHIPTG+TV C +ERSQ NK KAL LKAKL + ++
Sbjct: 242 FRASGAGGQYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKL 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+ KQ G+ WG QIR+YVFHPYKL+KD+RTG+ET ++ +VMDGE++ FI+SYLK
Sbjct: 302 EEKKKQYEGEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLK 361
Query: 367 YK 368
+K
Sbjct: 362 WK 363
>sp|Q0SR12|RF2_CLOPS Peptide chain release factor 2 OS=Clostridium perfringens (strain
SM101 / Type A) GN=prfB PE=3 SV=1
Length = 364
Score = 329 bits (844), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/350 (46%), Positives = 230/350 (65%), Gaps = 4/350 (1%)
Query: 16 DRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKT 75
+ ++E+ AS L LEK+ AELE+K ++ FWD+ +AQE Q VKDKI+ +
Sbjct: 17 NNLKEMGASLDLASLEKKSAELELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNLNE 76
Query: 76 KMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISIT 135
++DD + +L EE D A +E S +K L+K +D ++ +LSG YD+ A++++
Sbjct: 77 RIDDVEVLKELMEENDEETA---KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLH 133
Query: 136 AGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLS 195
G GG+DA DW +MLLRMY RW EK+ Y ++ G+EAG+KS ++V+G +AYGYL
Sbjct: 134 TGVGGSDANDWTEMLLRMYTRWCEKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLK 193
Query: 196 GEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQ 255
EKG HR+VR SPFNA G RQTSF+ EV+P L + D++I DL I RAGG GGQ
Sbjct: 194 AEKGIHRLVRISPFNANGKRQTSFASVEVLPELTSDQ-DIEINPVDLRIDTYRAGGAGGQ 252
Query: 256 NVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRG 315
+VNK E+AVRITHIPTG+ V+C ERSQ +N+ A+ LK+KL+ + E +I+ + G
Sbjct: 253 HVNKTESAVRITHIPTGIVVQCQNERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTG 312
Query: 316 DAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ WG QIR+YVFHPY +VKD RT ETS++ VM G+++ FI +YL
Sbjct: 313 ELKDMGWGSQIRSYVFHPYSMVKDHRTNVETSNVNGVMGGDIDNFIIAYL 362
>sp|B8G607|RF2_CHLAD Peptide chain release factor 2 OS=Chloroflexus aggregans (strain
MD-66 / DSM 9485) GN=prfB PE=3 SV=1
Length = 367
Score = 321 bits (823), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/360 (44%), Positives = 235/360 (65%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
L +++E +R +R L + E+ +LE++A+D W+ AQE +Q LT +K++
Sbjct: 5 LHEELETIRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEE 64
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ L D +M +++L E+ D L + A+ ++ + + + Q EL LLSGPYD
Sbjct: 65 VALWNDLDHRMTSLAELIELAEQ--EGDESLAADLAAELRAVQREVAQRELEILLSGPYD 122
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A +SI AG GGTDAQDWA MLLRMY RW E++ Y +++ S GEEAGIKSA IE+
Sbjct: 123 DRDAFLSIQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIR 182
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G YAYGY E G HR++R SPFNA RQTSF+ EVMP + +++ +V+I EDL I
Sbjct: 183 GPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEV-DDAPEVEIKPEDLRIDV 241
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQ VN ++AVRITH+PTG+ V C ERSQ+ N+ AL L+A+LL +++
Sbjct: 242 FRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQ 301
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E ++RG+ +A +G Q+R Y HP LVKD RT +ETS++ +V+DGE++PFI+++L+
Sbjct: 302 AEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLR 361
>sp|C4L5K9|RF2_EXISA Peptide chain release factor 2 OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=prfB PE=3 SV=1
Length = 366
Score = 317 bits (813), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 227/361 (62%), Gaps = 3/361 (0%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++R ++EA + R+E RAS L + E +AELE + FWDN+ +AQ+ + +K
Sbjct: 5 DIRNELEAMAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ D + +D ++L +E DA + EE I+ L K D FEL LL+GPY
Sbjct: 65 MVDKYQDLANQHEDGEVTLELIKE--EPDAEMQEELGESIQALKKEFDDFELEILLNGPY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ + GAGGT++QDWA MLLRMY R+ +KQ +K V+ GEEAG+KS + +
Sbjct: 123 DANNAILELHPGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
G AYGYL EKG HR+VR SPF++ G R TSF +VMP ++ +++++ EDL I
Sbjct: 183 VGHNAYGYLKAEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEF-DDDIEIEVRTEDLRID 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++N ++AVRITH+PTGV V C ERSQ+ N+ A+ LKAKL ++
Sbjct: 242 TYRASGAGGQHINTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ ++ +IRG+ WG QIR+YVFHPY +VKD RT +E + VMDG++ PFI +YL
Sbjct: 302 QQRKLDEIRGEKTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYL 361
Query: 366 K 366
+
Sbjct: 362 R 362
>sp|A8M3R1|RF2_SALAI Peptide chain release factor 2 OS=Salinispora arenicola (strain
CNS-205) GN=prfB PE=3 SV=1
Length = 373
Score = 315 bits (806), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 163/375 (43%), Positives = 241/375 (64%), Gaps = 7/375 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
DF KD++ +E + + +L + A LE A+ WD++A AQ+ L+
Sbjct: 5 DFAEQLKDLDTTLRNIESV---LDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSY 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +I LTD ++++DD +++L E +D G+L E A+ I L K++D+ E+ LLS
Sbjct: 62 VNGEITKLTDLRSRLDDTQVLLELAEA--ESDPGVLTEVAAEITGLAKSIDEMEVRTLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA
Sbjct: 120 GEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ + IPE ++
Sbjct: 180 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIDIPENEM 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
R+ G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L+A+LL
Sbjct: 239 RTDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ ++++ ++ DA + WG Q+R+YV HPY++VKD+RT ET SV DGEL+ FI+
Sbjct: 299 RQEEQAKLQGLKTDAAGS-WGDQMRSYVLHPYQMVKDLRTEQETGSPSSVFDGELDAFIE 357
Query: 363 SYLKYKYSMSLSASD 377
+ ++++ LS +
Sbjct: 358 AGIRWRKQQQLSGDN 372
>sp|P28367|RF2_BACSU Peptide chain release factor 2 OS=Bacillus subtilis (strain 168)
GN=prfB PE=3 SV=2
Length = 366
Score = 314 bits (804), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 228/364 (62%), Gaps = 3/364 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + R+ + R S L+ E +AEL+ + AD FW+++ +AQ + +KD
Sbjct: 6 IRAELENMASRLADFRGSLDLESKEARIAELDEQMADPEFWNDQQKAQTVINEANGLKDY 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N ++ L +E TD L E +K L K ++FEL LLS PYD
Sbjct: 66 VNSYKKLNESHEELQMTHDLLKEEPDTDLQL--ELEKELKSLTKEFNEFELQLLLSEPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RWGE++ +K ++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYTRWGERRGFKVETLDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF EVMP +E +D+ I ED+++
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEFNDE-IDIDIRTEDIKVDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ+VN ++AVRITH+PT V V C ERSQ+ N+ +A+ LKAKL E++
Sbjct: 243 YRASGAGGQHVNTTDSAVRITHLPTNVVVTCQTERSQIKNRERAMKMLKAKLYQRRIEEQ 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ +IRG+ + WG QIR+YVFHPY +VKD RT E ++ +VMDG+++ FI +YL+
Sbjct: 303 QAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNTEMGNVQAVMDGDIDTFIDAYLR 362
Query: 367 YKYS 370
K S
Sbjct: 363 SKLS 366
>sp|A4X3K6|RF2_SALTO Peptide chain release factor 2 OS=Salinispora tropica (strain ATCC
BAA-916 / DSM 44818 / CNB-440) GN=prfB PE=3 SV=1
Length = 373
Score = 312 bits (799), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 161/376 (42%), Positives = 242/376 (64%), Gaps = 7/376 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D+ KD++A +E + + +L + A LE A+ WD++A AQ+ L+
Sbjct: 5 DYAEQLKDLDATLRNIESV---LDIDRLRADKARLEEAASAPDLWDDQARAQQVTSQLSY 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
V +IN L + ++++DDA +++L E +D G L E + + L KA+D+ E+ LLS
Sbjct: 62 VNGEINKLAELRSRLDDAKVLLELAEA--ESDPGALTEVEAEVAGLAKAIDEMEVRTLLS 119
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
G YD A+++I AGAGG DA D+A+MLLRMY+RW E+ Y T V E S EEAG+KSA
Sbjct: 120 GEYDSREALVAIRAGAGGVDAADFAEMLLRMYLRWAERHGYPTEVYETSYAEEAGLKSAT 179
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
V+ YAYG LS E GTHR+VR SPF+ +G RQTSF+G EV+P++ E++ + IPE ++
Sbjct: 180 FTVKVPYAYGTLSVESGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQTDHIDIPENEM 238
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
R+ G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L+A+LL
Sbjct: 239 RFDVYRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQLQNKASALRVLQARLLERK 298
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++ ++++ ++ DA + WG Q+R+YV HPY++VKD+RT ET +V DGEL+ FI+
Sbjct: 299 RQEEQAKLQGLKTDAAGS-WGDQMRSYVLHPYQMVKDLRTEQETGTPAAVFDGELDAFIE 357
Query: 363 SYLKYKYSMSLSASDA 378
+ ++++ L+ +A
Sbjct: 358 AGIRWRKQQQLADDNA 373
>sp|A2RLF5|RF2_LACLM Peptide chain release factor 2 OS=Lactococcus lactis subsp.
cremoris (strain MG1363) GN=prfB PE=3 SV=1
Length = 365
Score = 311 bits (798), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 237/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E S+++ R S L +LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYSEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ T +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNTMLEEAQTMLEMLQE--EADEDMQVELEEMTTALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
AV+ I G+GGT++QDW ML+RMY RWGE +K +++ G+ AG+KS I
Sbjct: 124 HMNAVLEIHPGSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFV 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF++ R TSF+ +VMP L ++S++V++ + D+++
Sbjct: 184 GRNAYGFLRGEKGVHRLVRISPFDSANRRHTSFTSVDVMPEL-DDSIEVEVRDADVKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+TH+PTG+ V+ T +R+Q N+ KA++ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD + WG QIR+YVF PY+LVKD RTG+ET I +VMDGE++ FI +YL+
Sbjct: 303 QAEVDELRGDQSEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLR 362
Query: 367 YK 368
+
Sbjct: 363 WN 364
>sp|Q2MGI2|RF2_STRPN Peptide chain release factor 2 OS=Streptococcus pneumoniae serotype
4 (strain ATCC BAA-334 / TIGR4) GN=prfB PE=3 SV=1
Length = 364
Score = 311 bits (796), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 237/368 (64%), Gaps = 5/368 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ ++A +++ R S L+ LE+E+A LE K + FW++ AQ+T Q L +
Sbjct: 2 DISVIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWNDNIAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K+ N + D+ ++ E D + +E + + EL+K + +E+T LLS
Sbjct: 62 LKNTYNTFHKMEELQDEVEILLDFLAE----DESVHDELVAQLAELDKIMTSYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K V++ G+EAGIKS
Sbjct: 118 EPYDHNNAILEIHPGSGGTEAQDWGDMLLRMYTRYGNAKGFKVEVLDYQAGDEAGIKSVT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ EG AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V+I E+D+
Sbjct: 178 LSFEGPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVEIREDDI 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ +A+ L+AKL +
Sbjct: 237 KMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQME 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
++++A+E+ ++G+ + WG QIR+YVF PY +VKD RT E + + VMDG+L+ FI
Sbjct: 297 QDKKAAEVDSLKGEKKEITWGSQIRSYVFTPYTMVKDHRTSFEVAQVDKVMDGDLDGFID 356
Query: 363 SYLKYKYS 370
+YLK++ S
Sbjct: 357 AYLKWRIS 364
>sp|Q02ZM8|RF2_LACLS Peptide chain release factor 2 OS=Lactococcus lactis subsp.
cremoris (strain SK11) GN=prfB PE=3 SV=1
Length = 365
Score = 310 bits (793), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 236/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E S+++ R S L +LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYSEKINGFRDSLDLDRLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNNMLEEAQTMLEMLQE--EADEDMQVELEEMTTALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
AV+ I G+GGT++QDW ML+RMY RWGE +K +++ G+ AG+KS I
Sbjct: 124 HMNAVLEIHPGSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVAIRFV 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF++ R TSF+ +VMP L ++S++V++ + D+++
Sbjct: 184 GRNAYGFLRGEKGVHRLVRISPFDSANRRHTSFTSVDVMPEL-DDSIEVEVRDADVKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+TH+PTG+ V+ T +R+Q N+ KA++ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHVPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD + WG QIR+YVF PY+LVKD RTG+ET I +VMDGE++ FI +YL+
Sbjct: 303 QAEVDELRGDQSEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGEIDGFINAYLR 362
Query: 367 YK 368
+
Sbjct: 363 WN 364
>sp|B8HBH8|RF2_ARTCA Peptide chain release factor 2 OS=Arthrobacter chlorophenolicus
(strain A6 / ATCC 700700 / DSM 12829 / JCM 12360)
GN=prfB PE=3 SV=1
Length = 371
Score = 309 bits (792), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/350 (44%), Positives = 235/350 (67%), Gaps = 4/350 (1%)
Query: 19 EEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMD 78
E I ++ L +++AEL +A + WD+ A AQ+ L+ + ++ LT +++D
Sbjct: 18 ESIERVTDMEALREDIAELSERAGEPDLWDDPAAAQKITSRLSHRQSELERLTTLASRID 77
Query: 79 DAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGA 138
D +V+L + D DA + EAA+ ++ + KAL E+ LLSG YD+ AV+SI AGA
Sbjct: 78 DLEVLVELGQ--DEGDADSMGEAAAELESIQKALKNLEVVTLLSGEYDEREAVVSIRAGA 135
Query: 139 GGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEK 198
GG DA D+A+ML+RMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E
Sbjct: 136 GGVDAADFAEMLMRMYLRWAERHGYPTTVMDTSYAEEAGLKSATFEVKAPYAFGTLSVEA 195
Query: 199 GTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVN 258
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IP+ ++ + R+ G GGQ+VN
Sbjct: 196 GTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIDIPDNEIRVDVFRSSGPGGQSVN 254
Query: 259 KVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAV 318
++AVR+THIPTGV V E+SQL N+ A+ L+++LL++ +EQ +E K + GD V
Sbjct: 255 TTDSAVRLTHIPTGVVVSMQNEKSQLQNRAAAMRVLQSRLLLLKKEQEDAEKKALAGD-V 313
Query: 319 KAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
KA WG Q+R+YV +PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 314 KASWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363
>sp|Q9CGX1|RF2_LACLA Peptide chain release factor 2 OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=prfB PE=3 SV=1
Length = 365
Score = 308 bits (789), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 236/362 (65%), Gaps = 3/362 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R +E ++++ R S L++LE+E+A LE A FW+++A AQ+ + +K K
Sbjct: 6 IRNLLEGYAEKINGFRESLDLERLEEEIALLENDMAQPEFWNDQAAAQKVIDESNALKAK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ +++A T++++ +E D + E + L + ++ +EL +L+ PYD
Sbjct: 66 YDNYQAMNNMLEEAQTMLEMLQE--EADEEMQAELEEMTIALGQKIESYELEIMLNQPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
AV+ I G+GGT++QDW ML+RMY RWGE +K +++ G+ AG+KS +
Sbjct: 124 HMNAVLEIHPGSGGTESQDWGSMLMRMYTRWGEAHGFKVEILDYQDGDVAGLKSVALRFV 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
GR AYG+L GEKG HR+VR SPF++ R TSF+ +VMP L ++S++V + + D+++
Sbjct: 184 GRNAYGFLRGEKGVHRLVRISPFDSANRRHTSFTSVDVMPEL-DDSIEVDVRDADVKMDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ KA++ LK+KL + +++
Sbjct: 243 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTMDRTQYGNRDKAMAMLKSKLYQLEMDKK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
+E+ ++RGD + WG QIR+YVF PY+LVKD RTG+ET I +VMDGEL+ FI +YL+
Sbjct: 303 QAEVDELRGDQSEISWGSQIRSYVFMPYQLVKDTRTGYETGQISNVMDGELDGFINAYLR 362
Query: 367 YK 368
+
Sbjct: 363 WN 364
>sp|A5IM04|RF2_THEP1 Peptide chain release factor 2 OS=Thermotoga petrophila (strain
RKU-1 / ATCC BAA-488 / DSM 13995) GN=prfB PE=3 SV=1
Length = 367
Score = 308 bits (788), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 233/363 (64%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ R +E + ++I + ++++E+ E+E K D S WD++ +A+E Q L +K
Sbjct: 4 FETRTRMEELEKKYKDILSVVNENEVDREIEEIEKKLTDPSVWDDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 120 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATIL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 180 IKGEYAYGYLKHESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 239 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+YVFHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 299 KKQREIQEIQGELKDISWGNQIRSYVFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LVY 361
>sp|B1LB88|RF2_THESQ Peptide chain release factor 2 OS=Thermotoga sp. (strain RQ2)
GN=prfB PE=3 SV=1
Length = 367
Score = 307 bits (787), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 232/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S WD++ +A+E Q L +K
Sbjct: 4 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLK 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 64 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 120 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATIL 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 180 IKGEYAYGYLKHESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 239 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 299 KKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 358
Query: 365 LKY 367
L Y
Sbjct: 359 LVY 361
>sp|Q9X1R5|RF2_THEMA Peptide chain release factor 2 OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=prfB PE=3 SV=1
Length = 369
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 232/363 (63%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
+ + +E + +++ + ++ KEL E+E K D S WD++ +A+E Q L +K
Sbjct: 6 FETKTKIEELEKKYKDVLSVVNEDEINKELEEVEKKLTDPSVWDDQKKAREYTQKLKRLK 65
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+ L ++ +D ++L++E D + + I++EL A+ + EL +L+G
Sbjct: 66 NISEDLKRVRSLFEDLEVAIELSDE----DQEMAQHVEEIVQELEGAVKKLELEIILNGK 121
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E++ + +VE GEEAGIK A I
Sbjct: 122 YDPNNAYLSVHPGAGGTESQDWAQMLLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATIL 181
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
++G YAYGYL E G HR+VR SPF+A R TSF+ V+P + ++ +D++I EDL+I
Sbjct: 182 IKGEYAYGYLKHESGVHRLVRISPFDAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKI 240
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RA G GGQ VNK E+AVRITH+PTG+ V C ERSQ NK AL LKAKL + E
Sbjct: 241 ETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQHQNKQTALKILKAKLYQLEME 300
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ EI++I+G+ WG QIR+Y+FHPY +VKD RTG ET+++ +VMDG+++ FI++
Sbjct: 301 KKRREIQEIQGELKDISWGNQIRSYIFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAE 360
Query: 365 LKY 367
L Y
Sbjct: 361 LVY 363
>sp|Q4L4H9|RF2_STAHJ Peptide chain release factor 2 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=prfB PE=3 SV=2
Length = 371
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 230/367 (62%), Gaps = 4/367 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S + E + E E + FWD++ +AQ+ + +K
Sbjct: 6 IKRNIDEYRNNLAQIRGSLDFENKETNIQEYEEMMTEPDFWDDQNKAQDVIDKNNALKSV 65
Query: 67 INLLTDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
+N + + +++D T L EE+D LE+ KE +DQFEL LL GP+
Sbjct: 66 VNGYHELEEEVEDMTATWELLQEELDGDVKSDLEQNVLDFKE---KVDQFELQLLLDGPH 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A++ + GAGGT++QDWA MLLRMY R+GE+Q +K V+ G+EAG+KS + +
Sbjct: 123 DANNAILELHPGAGGTESQDWASMLLRMYQRYGEQQGFKVETVDYLPGDEAGVKSVTLLI 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 183 KGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPEFNNDEIEIEINPDDITVD 242
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
RA G GGQ++NK E+A+RITH PTG+ V ERSQ+ N+ A+ LKAKL + E+
Sbjct: 243 TFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKMLKAKLYQLKLEE 302
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+ E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDGE+ PFI+SYL
Sbjct: 303 QEREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYL 362
Query: 366 KYKYSMS 372
+Y + S
Sbjct: 363 RYTMNQS 369
>sp|B9L0E3|RF2_THERP Peptide chain release factor 2 OS=Thermomicrobium roseum (strain
ATCC 27502 / DSM 5159 / P-2) GN=prfB PE=3 SV=1
Length = 374
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 227/356 (63%), Gaps = 5/356 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D+E +R++ I L +++ +LE +AAD W + AQ L+ L+ ++D +
Sbjct: 8 DLEELVERLDRIGVRLCLPSKRQQIEQLEHEAADPDLWQDPQRAQSLLRRLSQLRDLVQE 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ D + + L + D AG +E+ A+ EL + + Q EL LL+G YD
Sbjct: 68 WETLSQQARDLLELRALASD-DLELAGQVEQEAT---ELAERVRQLELRLLLTGQYDGHD 123
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
A++++ AG GG DAQDWA+MLLRMY+RW ++ + VV+ GEEAGIKSA +EV G Y
Sbjct: 124 AILAVHAGTGGVDAQDWAEMLLRMYLRWAQRAGFAAEVVDLLEGEEAGIKSATVEVRGPY 183
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL GE GTHR+VR SPF+A R TSF+ EV+PL+ EE DV+I EED+ I RA
Sbjct: 184 AYGYLKGEAGTHRLVRLSPFDAAHRRHTSFALVEVLPLV-EEDDDVEIREEDIRIDTFRA 242
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VNK E+AVRITH+PTG+ V C ERSQ+ N+ A+ LKA+LL + QR E
Sbjct: 243 SGHGGQHVNKTESAVRITHLPTGIVVTCQNERSQIQNRETAMKILKARLLELKIRQRQEE 302
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++G V WG +IR+YV HPY +V D RT T +I +V++GE++PFI++YL
Sbjct: 303 QARLKGKPVVTGWGNRIRSYVLHPYTMVTDHRTEVSTPNIQAVLEGEIDPFIEAYL 358
>sp|A6WEK6|RF2_KINRD Peptide chain release factor 2 OS=Kineococcus radiotolerans (strain
ATCC BAA-149 / DSM 14245 / SRS30216) GN=prfB PE=3 SV=1
Length = 367
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 230/348 (66%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
IR + L L KELA+L +AA S WD+ AQ L+ V+ +++ + ++DD
Sbjct: 19 IREVSDLDALRKELADLNDEAAAPSLWDDPEHAQTVTSRLSAVQAELDRIEKMGGRIDDL 78
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L+E D DA L EA + + E+ + L Q E+ LLSG YD A+++I + AGG
Sbjct: 79 EVLVELSE--DEHDADSLAEAETELNEVKEQLAQLEVRTLLSGEYDSREAIVTIRSEAGG 136
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+ML+RMY+RW E++ YK+ V + S EEAGIKSA +V YAYG LS E+GT
Sbjct: 137 VDAADFAEMLMRMYLRWAERRGYKSEVYDTSYAEEAGIKSATFKVAAPYAYGTLSVEQGT 196
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+G EV+P++ E V +PE ++ + R+ G GGQ+VN
Sbjct: 197 HRLVRISPFDNQGRRQTSFAGVEVLPVVAETDH-VDVPENEVRVDVYRSSGPGGQSVNTT 255
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+TH+PTG+ V C E+SQL NK A+ L+AKLL A + R +E+ ++GD
Sbjct: 256 DSAVRLTHLPTGIVVTCQNEKSQLQNKAAAMRVLQAKLLEKARKDRQAELDALKGDD-SG 314
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV HPY++VKD+RT +E + S+ DGE++ F+++ ++++
Sbjct: 315 SWGNQMRSYVLHPYQMVKDLRTNYEVGNTSSIFDGEIDSFLEAGIRWR 362
>sp|B7IE81|RF2_THEAB Peptide chain release factor 2 OS=Thermosipho africanus (strain
TCF52B) GN=prfB PE=3 SV=1
Length = 369
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/365 (44%), Positives = 232/365 (63%), Gaps = 6/365 (1%)
Query: 1 MQDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQAL 60
M DF L++ ++ A + E+I + KEL ELE + DS FW ++ +A+E Q
Sbjct: 1 MIDF-ELKQKIDEAKKKFEDIIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKA 59
Query: 61 TDVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQL 120
++ I+ + D + K +D ++L++E D +E +++E+ K + FEL +
Sbjct: 60 QRIRKIIDDMKDIEAKFEDLDAAIELSDE----DQSFVETIKEMVEEIEKKVKTFELELI 115
Query: 121 LSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKS 180
L+G +D A ++I GAGGT++QDWA MLLRMY+RW E++ + ++V+ GEEAGIKS
Sbjct: 116 LNGKFDASNAYLTIHPGAGGTESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKS 175
Query: 181 AVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEE 240
A+I ++G YAYGYL E+G HR+VR SPF+A R TSF+ V+P + ++ PE
Sbjct: 176 AMIYIKGDYAYGYLKYERGVHRLVRISPFDANKRRHTSFASVNVIPEIDDDIDIEINPE- 234
Query: 241 DLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLV 300
DL I RA G GGQ VNK E+AVRITHIPTG+ V C ERSQL NK AL LKA+L
Sbjct: 235 DLRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQ 294
Query: 301 IAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPF 360
+ E+R ++++I+G+ WG QIR+YVF PY +VKD RT ET +I +VMDGE++ F
Sbjct: 295 LELEKRQKQLEEIQGELKDISWGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIF 354
Query: 361 IKSYL 365
I+S L
Sbjct: 355 IESEL 359
>sp|A8AY61|RF2_STRGC Peptide chain release factor 2 OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=prfB PE=3
SV=1
Length = 364
Score = 305 bits (782), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 233/366 (63%), Gaps = 5/366 (1%)
Query: 3 DFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTD 62
D +R+ ++A +++ R S L+ LE+E+A LE K + FWD+ AQ+T Q L +
Sbjct: 2 DISEIRQKIDANREKLASFRGSLDLEGLEEEIAILENKMTEPDFWDDNIAAQKTSQELNE 61
Query: 63 VKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLS 122
+K D++ ++ E DS E + EL K + +E+T LLS
Sbjct: 62 LKQTYENFHQMTDLFDESEILLDFLAEDDSVQE----ELEEKLAELEKMMTSYEMTLLLS 117
Query: 123 GPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAV 182
PYD A++ I G+GGT+AQDW DMLLRMY R+G + +K V++ G+EAGIKS
Sbjct: 118 EPYDNNNAILEIHPGSGGTEAQDWGDMLLRMYTRFGNAKGFKVEVLDYQAGDEAGIKSVT 177
Query: 183 IEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDL 242
+ EG +AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V+I E+D+
Sbjct: 178 LSFEGPHAYGLLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVEIREDDI 236
Query: 243 EISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIA 302
++ R+GG GGQNVNKV T VR+THIPTG+ V+ T +R+Q N+ +A+ L+AKL +
Sbjct: 237 KMDTFRSGGAGGQNVNKVSTGVRLTHIPTGIVVQSTVDRTQYGNRDRAMKMLQAKLYQLE 296
Query: 303 EEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIK 362
+E++A+E+ ++GD + WG QIR+YVF PY +VKD RT +E + + VMDG+L+ FI
Sbjct: 297 QEKKAAEVDSLKGDKKEISWGSQIRSYVFTPYTMVKDHRTSYEVAQVDKVMDGDLDGFID 356
Query: 363 SYLKYK 368
+YLK++
Sbjct: 357 AYLKWR 362
>sp|Q49VV3|RF2_STAS1 Peptide chain release factor 2 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=prfB PE=3 SV=2
Length = 373
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 231/368 (62%), Gaps = 18/368 (4%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ ++++E++R S L+ E + E E D +FWDN+ +AQ DV DK
Sbjct: 6 IKRNIDTYNEKLEQLRGSLDLEAKETNIQEYEEMMTDPTFWDNQEKAQ-------DVIDK 58
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKE--------LNKALDQFELT 118
N L K+ ++ T+ E+MD+T A LLEE +K+ LDQFEL
Sbjct: 59 NNAL---KSVVNAYRTLESELEDMDTTRALLLEEDDETMKQDLEQSVQDFKNELDQFELQ 115
Query: 119 QLLSGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGI 178
LL GPYD A++ + GAGGT++QDW +MLLRMY R+ E++ + + + G+EAG+
Sbjct: 116 LLLDGPYDANNAIMELHPGAGGTESQDWTNMLLRMYQRYCEQKGFNVEIADYLPGDEAGV 175
Query: 179 KSAVIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIP 238
KS + V+G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P +++ I
Sbjct: 176 KSVTLIVKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPQFNNTEIEIDIN 235
Query: 239 EEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKL 298
+D+ + RA G GGQ++NK E+A+RITH PTG+ V ERSQ+ N+ A+ LK+KL
Sbjct: 236 PDDITVDTFRASGAGGQHINKTESAIRITHHPTGIVVNNQNERSQIKNREAAMKTLKSKL 295
Query: 299 LVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELE 358
+ E++ E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++
Sbjct: 296 YQLKIEEQEQEMAEIRGEQKEIGWGSQIRSYVFHPYAMVKDHRTNEETGKVDAVMDGDIG 355
Query: 359 PFIKSYLK 366
PFI+++L+
Sbjct: 356 PFIEAFLR 363
>sp|A0JYC5|RF2_ARTS2 Peptide chain release factor 2 OS=Arthrobacter sp. (strain FB24)
GN=prfB PE=3 SV=1
Length = 371
Score = 305 bits (781), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 235/348 (67%), Gaps = 4/348 (1%)
Query: 21 IRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDA 80
I + +++L++++AEL +A + + WD+ A AQ+ L+ + ++ L +++DD
Sbjct: 20 IENVSNVEELKEDIAELSERAGEPNLWDDPAAAQKITSRLSHRQSELERLNTLVSRIDDL 79
Query: 81 VTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGG 140
+V+L ++ D DA + EAA+ ++ + K+L E+ LLSG +D+ AV++I AGAGG
Sbjct: 80 EVLVELGQDED--DADSMGEAAAELESIRKSLKDLEVVTLLSGEFDEREAVVTIRAGAGG 137
Query: 141 TDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGT 200
DA D+A+MLLRMY+RW E+ Y T +++ S EEAG+KSA EV YAYG LS E GT
Sbjct: 138 VDAADFAEMLLRMYLRWAERHGYPTTIMDTSYAEEAGLKSATFEVNAPYAYGTLSVEAGT 197
Query: 201 HRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKV 260
HR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IP+ ++ + R+ G GGQ+VN
Sbjct: 198 HRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDSIDIPDNEIRVDVFRSSGPGGQSVNTT 256
Query: 261 ETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKA 320
++AVR+THIPTG V E+SQL N+ AL L+++LL++ +EQ +E K GD VKA
Sbjct: 257 DSAVRLTHIPTGTVVSMQNEKSQLQNRAAALRVLQSRLLLLKKEQEDAEKKAFAGD-VKA 315
Query: 321 EWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG Q+R+YV +PY++VKD+RT HE + +V DGE++ FI + ++++
Sbjct: 316 SWGDQMRSYVLNPYQMVKDLRTEHEVGNTSAVFDGEIDDFIDAGIRWR 363
>sp|B9DRN6|RF2_STRU0 Peptide chain release factor 2 OS=Streptococcus uberis (strain ATCC
BAA-854 / 0140J) GN=prfB PE=3 SV=1
Length = 366
Score = 304 bits (779), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 227/362 (62%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L LE+E+A LE K + FW++ AQ+T Q L +K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDGLEEEIALLENKMTEPDFWNDNIAAQKTSQELNTLKST 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
D D+ +L EM + D + EE + +L + L Q+E+T LLS PYD
Sbjct: 66 FETFHDMLELSDET----ELYLEMLAEDESIKEELEEALVKLEQILSQYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDWADML RMY R+G + +K ++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWADMLFRMYTRFGNAKGFKVETLDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG+L E G HR+VR SPF++ R TSF+ EVMP L +++++V I ++D+++
Sbjct: 182 GPNAYGFLKSEMGVHRLVRISPFDSAKRRHTSFTSVEVMPEL-DDTIEVDIRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVASTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ ++GD + WG QIR+YVF PY +VKD RT E + + VMDGE++ FI +YLK
Sbjct: 301 AEEVNALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFEVAQVDKVMDGEIDGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>sp|Q3K2F4|RF2_STRA1 Peptide chain release factor 2 OS=Streptococcus agalactiae serotype
Ia (strain ATCC 27591 / A909 / CDC SS700) GN=prfB PE=3
SV=1
Length = 365
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 233/362 (64%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+E+A LE + + FW++ AQ+T Q L ++K K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENQMTEPDFWNDNIAAQKTSQELNELKGK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + D+ ++++ +E DS L EE + +L+K + +E+T LLS PYD
Sbjct: 66 YDTFHNMQELSDETELLLEMLDEDDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDW D+LLRMY R+G +K V++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG L E G HR+VR SPF++ R TSF+ EVMP L +++++V++ ++D+++
Sbjct: 182 GPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPEL-DDTIEVEVRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ ++GD + WG QIR+YVF PY +VKD RT E + + VMDGE+ FI +YLK
Sbjct: 301 AQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>sp|A2RFN2|RF2_STRPG Peptide chain release factor 2 OS=Streptococcus pyogenes serotype
M5 (strain Manfredo) GN=prfB PE=3 SV=1
Length = 365
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/362 (41%), Positives = 231/362 (63%), Gaps = 5/362 (1%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R+ + +++ R S L +LE+E+A LE + FW++ AQ+T Q L ++K K
Sbjct: 6 IRQKIVENKEKLTSFRRSLDLDRLEEEIALLENHMTEPDFWNDNIAAQKTSQELNELKGK 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + D+ ++++ +E DS L EE + +L+K + +E+T LLS PYD
Sbjct: 66 YDTFHNMQELSDETELLLEMLDEDDS----LKEELEENLMQLDKIMGAYEMTLLLSEPYD 121
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ I G+GGT+AQDW D+LLRMY R+G +K V++ G+EAGIKS + E
Sbjct: 122 HNNAILEIHPGSGGTEAQDWGDLLLRMYTRFGNANGFKVEVLDYQAGDEAGIKSVTLSFE 181
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYG L E G HR+VR SPF++ R TSF+ EVMP L + +++V++ ++D+++
Sbjct: 182 GPNAYGLLKSEMGVHRLVRISPFDSAKRRHTSFASVEVMPEL-DNTIEVEVRDDDIKMDT 240
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
R+GG GGQNVNKV T VR+THIPTG+ V T +R+Q N+ +A+ L+AKL + +E++
Sbjct: 241 FRSGGAGGQNVNKVSTGVRLTHIPTGIVVSSTVDRTQYGNRDRAMKMLQAKLYQLEQEKK 300
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ ++GD + WG QIR+YVF PY +VKD RT E + + VMDGE+ FI +YLK
Sbjct: 301 AQEVDALKGDKKEITWGSQIRSYVFTPYTMVKDHRTNFELAQVDKVMDGEINGFIDAYLK 360
Query: 367 YK 368
++
Sbjct: 361 WR 362
>sp|Q71WR9|RF2_LISMF Peptide chain release factor 2 OS=Listeria monocytogenes serotype
4b (strain F2365) GN=prfB PE=3 SV=1
Length = 366
Score = 301 bits (772), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 229/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L EE IK + +FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQEELEKDIKAYMATISEFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L ++ +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLR 362
>sp|C5CGS4|RF2_KOSOT Peptide chain release factor 2 OS=Kosmotoga olearia (strain TBF
19.5.1) GN=prfB PE=3 SV=1
Length = 370
Score = 301 bits (772), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 224/363 (61%), Gaps = 5/363 (1%)
Query: 5 YNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVK 64
Y ++ D+ E I+ + + +++++L+ +E + +D S W ++ A + Q ++
Sbjct: 4 YETNARIQELRDKFENIKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALR 63
Query: 65 DKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGP 124
+++LL + ++ V+L+EE D LE ++KE + +FEL LLS P
Sbjct: 64 SQLDLLNKVQELFENIDIAVELSEE----DESYLENLNELLKEAEDMVKEFELNILLSSP 119
Query: 125 YDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIE 184
YD A +S+ GAGGT++QDWA MLLRMY+RW E+ YK +E+ GEEAGIKSA I
Sbjct: 120 YDAYNAYLSVHPGAGGTESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATIN 179
Query: 185 VEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEI 244
+ G YAYG L E G HR+VR SPF+A R TSF+ V P + ++ +++ I EDL+I
Sbjct: 180 IAGPYAYGKLKYEAGVHRLVRISPFDANHRRHTSFASVSVFPEM-DDDVEIDIRPEDLKI 238
Query: 245 SFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEE 304
RAGG GGQ+VN+ E+AVRITHIPTG+ V C ERSQ NK A+ LKAKL + E
Sbjct: 239 DTYRAGGAGGQHVNRTESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELE 298
Query: 305 QRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSY 364
++ E ++ G+ WG QIR+YVF PY +VKD RT +ET D+ +VMDG ++ FI+
Sbjct: 299 KKRQEKMKLMGEQKDIAWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKE 358
Query: 365 LKY 367
L +
Sbjct: 359 LLF 361
>sp|Q88YL5|RF2_LACPL Peptide chain release factor 2 OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=prfB PE=3 SV=2
Length = 377
Score = 300 bits (769), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 221/359 (61%), Gaps = 5/359 (1%)
Query: 11 VEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLL 70
+E V++ R S L L + + E E + A+ FWD++A AQ+ + +K K +
Sbjct: 16 IEEMQSAVDDFRGSLDLDALNESIQENEARMAEPGFWDDQAAAQKVIDENNVLKGKYDTF 75
Query: 71 TDFKTKMDD-AVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
++ D AV L+EE DA + E + + L Q+ L LL GPYD+
Sbjct: 76 KQLADEVGDLAVAYELLSEE---PDAEMQAEFETDFQHAEHDLQQYRLNLLLDGPYDRNN 132
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
A++ I GAGGT++QDW MLLRMY RW +K V+ G+EAGIKS + + G
Sbjct: 133 AILEIHPGAGGTESQDWGAMLLRMYTRWAASHNFKVETVDYQAGDEAGIKSVTLLISGHN 192
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYGYL EKG HR+VR SPF+A G R TSF+ +VMP L ++++DV I EDL+I RA
Sbjct: 193 AYGYLRSEKGVHRLVRISPFDAAGRRHTSFASVDVMPEL-DDTVDVDIRPEDLKIDVYRA 251
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VNK +AVRITH+PTG+ V +RSQL N+ AL+ L+AKL EE++A E
Sbjct: 252 SGAGGQHVNKTSSAVRITHVPTGIVVASQAQRSQLQNRQTALNMLRAKLYEREEEKKAKE 311
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
I+G+ + WG QIR+YVFHPY +VKD RT +E+ +VMDG+L+PF+ +YL++K
Sbjct: 312 RAAIQGEQMDIGWGSQIRSYVFHPYTMVKDHRTNYESHHGQAVMDGDLDPFMDAYLQWK 370
>sp|Q927Y4|RF2_LISIN Peptide chain release factor 2 OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=prfB PE=3 SV=2
Length = 366
Score = 300 bits (769), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 228/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L E IK + +FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQAELEKDIKAYVATISEFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L +E +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPELDDE-IEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 362
>sp|A9WPT6|RF2_RENSM Peptide chain release factor 2 OS=Renibacterium salmoninarum
(strain ATCC 33209 / DSM 20767 / JCM 11484 / NBRC 15589
/ NCIMB 2235) GN=prfB PE=3 SV=1
Length = 374
Score = 300 bits (768), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 225/339 (66%), Gaps = 4/339 (1%)
Query: 30 LEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLTEE 89
L K++A L +A WDN AEAQ+ L+ + K+ L ++DD +V+L E
Sbjct: 32 LRKDIAVLSEQAGVPDLWDNPAEAQKVTSKLSHAQSKLERLETLTARIDDLEVLVELAES 91
Query: 90 MDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWADM 149
D+ L EA+ + L K+L + E+ LL+G YD+ AV++I +GAGG DA D+A+M
Sbjct: 92 EHDEDS--LAEASKELVSLQKSLQELEVVTLLAGEYDEREAVVTIRSGAGGVDAADFAEM 149
Query: 150 LLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQSPF 209
LLRMY+RW E+ Y T V++ S EEAG+KSA EV+ YA+G LS E GTHR+VR SPF
Sbjct: 150 LLRMYLRWAERHGYPTSVLDTSYAEEAGLKSATFEVKAPYAFGTLSVEAGTHRLVRISPF 209
Query: 210 NAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRITHI 269
+ +G RQTSF+ EV+PL+ E++ ++IP+ D+ + R+ G GGQ+VN ++AVR+TH+
Sbjct: 210 DNQGRRQTSFAAVEVIPLI-EQTDSIEIPDNDIRVDVFRSSGPGGQSVNTTDSAVRLTHL 268
Query: 270 PTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNY 329
PTG V E+SQL N+ A L+++LL++ ++Q +E K + GD VKA WG Q+R+Y
Sbjct: 269 PTGTVVSMQNEKSQLQNRAAATRVLQSRLLLLKKQQEDAEKKALAGD-VKASWGDQMRSY 327
Query: 330 VFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
V +PY++VKD+RT HE + V+DG+++ FI + ++++
Sbjct: 328 VLNPYQMVKDLRTEHEVGNTSGVLDGDIDDFIDAGIRWR 366
>sp|Q6GIN7|RF2_STAAR Peptide chain release factor 2 OS=Staphylococcus aureus (strain
MRSA252) GN=prfB PE=3 SV=1
Length = 369
Score = 300 bits (767), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 227/360 (63%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K + V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|Q8Y4D8|RF2_LISMO Peptide chain release factor 2 OS=Listeria monocytogenes serovar
1/2a (strain ATCC BAA-679 / EGD-e) GN=prfB PE=3 SV=2
Length = 366
Score = 299 bits (765), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 227/360 (63%), Gaps = 3/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
+R ++E + ++++ R S L +E +AELE + D +FW+++ AQ+ + K+
Sbjct: 6 IRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKET 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+ + + ++L +E D L EE IK + FEL +LS PYD
Sbjct: 66 YQAFHALEEEQESMEISLELLKE--EADEDLQEELEKDIKAYMATISAFELKLMLSDPYD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
K A++ + GAGGT++QDW MLLRMY RW EK+ +K +++ G+EAGIKS + ++
Sbjct: 124 KNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF +VMP L + +++++ EDL+I
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DGDIEIEVRTEDLKIDT 242
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++N ++AVR+THIP+G+ V C ERSQL N+ +A+ LK KL +E++
Sbjct: 243 YRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEK 302
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
E+ +IRG+ + WG QIR+YVFHPY +VKD RT +ET +I +VMDG+L+ FI +YL+
Sbjct: 303 ERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLR 362
>sp|C5BYB6|RF2_BEUC1 Peptide chain release factor 2 OS=Beutenbergia cavernae (strain
ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=prfB PE=3 SV=1
Length = 374
Score = 298 bits (764), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/351 (42%), Positives = 233/351 (66%), Gaps = 4/351 (1%)
Query: 18 VEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKM 77
+E+I A L +AEL AA WD+ AQ+ L+ + ++ L ++++
Sbjct: 16 LEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQSELERLDTLRSRI 75
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
DD T+V+L E D DA L EA + + ++ ++ + E+ LL+G YD AV++I +G
Sbjct: 76 DDLETLVQLAAEED--DADTLAEAEAELTKIRTSMGELEVRTLLAGEYDSREAVVTIRSG 133
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
AGG DA D+A+MLLRMY+RW E++ Y T+V++ S EEAG+KSA EV+ YA+G LS E
Sbjct: 134 AGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKVPYAFGTLSVE 193
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
GTHR+VR SPF+ +G RQTSF+ EV+PL+ E++ + IPE D+ I R+ G GGQ+V
Sbjct: 194 AGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDHIDIPETDIRIDVFRSSGPGGQSV 252
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
N ++AVRITH+PTG+ V E+SQ+ N+ A+ L+++LL+ +E+ ++ K++ GD
Sbjct: 253 NTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSRLLLAMQEEENAKKKELAGD- 311
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
VKA WG Q+R+YV PY++VKD+RT HE + +V DG+++ FI++ ++++
Sbjct: 312 VKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFIEAGIRWR 362
>sp|Q6GB76|RF2_STAAS Peptide chain release factor 2 OS=Staphylococcus aureus (strain
MSSA476) GN=prfB PE=3 SV=1
Length = 369
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|Q7A6R4|RF2_STAAN Peptide chain release factor 2 OS=Staphylococcus aureus (strain
N315) GN=prfB PE=1 SV=2
Length = 369
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|Q99VM1|RF2_STAAM Peptide chain release factor 2 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=prfB PE=1 SV=2
Length = 369
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|Q5HHR5|RF2_STAAC Peptide chain release factor 2 OS=Staphylococcus aureus (strain
COL) GN=prfB PE=3 SV=1
Length = 369
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|Q2YSH5|RF2_STAAB Peptide chain release factor 2 OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=prfB PE=3 SV=2
Length = 369
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|A6TZN3|RF2_STAA2 Peptide chain release factor 2 OS=Staphylococcus aureus (strain
JH1) GN=prfB PE=3 SV=1
Length = 369
Score = 298 bits (762), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 226/360 (62%), Gaps = 2/360 (0%)
Query: 7 LRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDK 66
++++++ + + +IR S L+ E + E E A+ +FWDN+ +AQ+ + +K
Sbjct: 6 IKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAI 65
Query: 67 INLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYD 126
+N + ++DD L +E D + E+ + +D++EL LL GP+D
Sbjct: 66 VNGYKTLQAEVDDMDATWDLLQE--EFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHD 123
Query: 127 KEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVE 186
A++ + GAGGT++QDWA+ML RMY R+ EK+ +K V+ G+EAGIKS + ++
Sbjct: 124 ANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIK 183
Query: 187 GRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISF 246
G AYGYL EKG HR+VR SPF++ G R TSF+ +V+P + ++++I +D+ +
Sbjct: 184 GHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDT 243
Query: 247 SRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQR 306
RA G GGQ++NK E+A+RITH P+G+ V ERSQ+ N+ A+ LK+KL + E++
Sbjct: 244 FRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQ 303
Query: 307 ASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLK 366
A E+ +IRG+ + WG QIR+YVFHPY +VKD RT ET + +VMDG++ PFI+SYL+
Sbjct: 304 AREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLR 363
>sp|A0LVP4|RF2_ACIC1 Peptide chain release factor 2 OS=Acidothermus cellulolyticus
(strain ATCC 43068 / 11B) GN=prfB PE=3 SV=1
Length = 369
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 226/362 (62%), Gaps = 7/362 (1%)
Query: 2 QDFYNLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALT 61
QD + KD++ R+ I L + +E A+LE +AAD W++ AQ L+
Sbjct: 4 QDPHEHLKDLDT---RLAGIEQVLDLPAMRREAADLERQAADPGLWNDPENAQRVTSRLS 60
Query: 62 DVKDKINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLL 121
++ +I + + ++DD + + +L E D EA + + L KA+D E+ LL
Sbjct: 61 FLQAEIRRVEGLRKRLDDVMVLFELAEA--ENDEPTRTEALAEMAALQKAIDDLEVRTLL 118
Query: 122 SGPYDKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSA 181
SG YD A+++I + AGG DA DWA MLLRMY+RW E+ Y T +++ S EEAGIKSA
Sbjct: 119 SGEYDAREALVTINSQAGGVDAADWAQMLLRMYLRWAERHGYPTEILDTSYAEEAGIKSA 178
Query: 182 VIEVEGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEED 241
V + YG L+ E GTHR+VR SPF+ + RQTSF+G +V+P++ E++ + IPE++
Sbjct: 179 TFIVHAPFTYGLLAAEHGTHRLVRISPFDNQARRQTSFAGVDVVPVV-EKTDHIDIPEDE 237
Query: 242 LEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVI 301
+ + R+ G GGQ VN ++AVRITH+PTG+ V C ERSQL N+ A+ L+A+LL
Sbjct: 238 IRVDVFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNRATAMMVLQARLLER 297
Query: 302 AEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFI 361
++ A+++ +RG+ + WG QIRNYV HPY+LVKD+RT ETS+ V+DGE++ FI
Sbjct: 298 RRQEEAAKLAALRGETTTS-WGTQIRNYVLHPYQLVKDLRTEVETSNTAGVLDGEIDEFI 356
Query: 362 KS 363
+
Sbjct: 357 DA 358
>sp|B2V5M0|RF2_SULSY Peptide chain release factor 2 OS=Sulfurihydrogenibium sp. (strain
YO3AOP1) GN=prfB PE=3 SV=1
Length = 369
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 229/351 (65%), Gaps = 23/351 (6%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQET----------LQALTDVKDKINLLTDFKTKM 77
++LE+E+ +L+ AD +FW++ +AQE L+ + V K+N L D+
Sbjct: 27 EKLEEEIKQLDDLMADPNFWNDTKKAQEISSRRNYLGEKLEEILTVDKKVNNLLDY---- 82
Query: 78 DDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAG 137
+T++++ E D L E +KE+ K + + EL LLS D + A++++ AG
Sbjct: 83 ---ITLLEMEE-----DQELYNEVEKELKEIEKEISRLELGSLLSDEMDSKNAILTVQAG 134
Query: 138 AGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGE 197
+GG +A DW +MLLRMY RW EK+ Y+ +V+ + AG+KSA + ++G YAYGYL GE
Sbjct: 135 SGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKSATLIIKGPYAYGYLKGE 194
Query: 198 KGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNV 257
+G HR+VR SPF+A R TSFS V+P + +E + V+I EEDL I RA G GGQ+V
Sbjct: 195 QGVHRLVRISPFDANKRRHTSFSAVSVIPEI-DEDIKVEINEEDLRIDTYRASGAGGQHV 253
Query: 258 NKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDA 317
NK ++AVRITHIPTG+ V C ERSQL NK+KA + LKAKL + E+R + K++ G+
Sbjct: 254 NKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQLELEKRKEKQKELEGEK 313
Query: 318 VKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
WG QIR+YVF PY++VKD+RTG ET +I +VMDGE++ FI+SYLK+K
Sbjct: 314 KDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDFIESYLKWK 364
>sp|A4F8R2|RF2_SACEN Peptide chain release factor 2 OS=Saccharopolyspora erythraea
(strain NRRL 23338) GN=prfB PE=3 SV=1
Length = 367
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 230/359 (64%), Gaps = 5/359 (1%)
Query: 10 DVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINL 69
D++ S +E I + L L ++AELE +AA WD+ AQ L + ++
Sbjct: 8 DLKELSTTLEGIESVMDLDALRAKIAELEEEAARPDLWDDVEHAQRVSSQLVHRQSELRK 67
Query: 70 LTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEG 129
+ D + +++D + +L+E D D L EA S +L K L+ E+ LLSG YD+
Sbjct: 68 IKDLRQRVEDLEVLYELSE--DEGDDSGLAEADSERTKLKKDLEALEVRTLLSGDYDQRE 125
Query: 130 AVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRY 189
AV++I A AGG DA D+A+ML+RMYVRW E+ Y V + S EEAG+KSA V Y
Sbjct: 126 AVVTIRAEAGGVDAADFAEMLMRMYVRWAERHEYPVEVYDTSYAEEAGLKSATFRVNAPY 185
Query: 190 AYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRA 249
AYG LS E+GTHR+VR SPF+ +G RQTSF+G EV+P++ EE+ V+IPE+D+ + R+
Sbjct: 186 AYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EETDHVEIPEKDIRVDVFRS 244
Query: 250 GGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASE 309
G GGQ+VN ++AVRITHIPTG+ V C E+SQL NK AL L++KLL +EQ +E
Sbjct: 245 SGPGGQSVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAALRVLQSKLLAKKKEQERAE 304
Query: 310 IKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYK 368
+ ++ + WG Q+R+YV HPY++VKD+RT E + +V+DG+++ F+++ ++++
Sbjct: 305 LDALKDSG--SSWGNQMRSYVLHPYQMVKDLRTEFEVGNPDAVLDGQIDGFLEAGIRWR 361
>sp|Q8NS78|RF2_CORGL Peptide chain release factor 2 OS=Corynebacterium glutamicum
(strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 /
NCIMB 10025) GN=prfB PE=3 SV=1
Length = 368
Score = 294 bits (753), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 224/348 (64%), Gaps = 6/348 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
Q++ + ELE +AAD S WD+ AQ+ L+ V+ ++ +TD + +++D +V+L
Sbjct: 26 QEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE D D + EE + +L +D E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 86 EEEDG-DTSIAEEE---LADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY RW EK +K + + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 142 EMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ D+ + R+ G GGQ+VN ++AVR+T
Sbjct: 202 PFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 261 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL-GAGGNASWGNQMR 319
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+YV HPY++VKD+RT E +D V+DG+++ +++ ++++ + S SA
Sbjct: 320 SYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWRMAESQSA 367
>sp|A4QCD3|RF2_CORGB Peptide chain release factor 2 OS=Corynebacterium glutamicum
(strain R) GN=prfB PE=3 SV=1
Length = 368
Score = 294 bits (753), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 224/348 (64%), Gaps = 6/348 (1%)
Query: 28 QQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKINLLTDFKTKMDDAVTIVKLT 87
Q++ + ELE +AAD S WD+ AQ+ L+ V+ ++ +TD + +++D +V+L
Sbjct: 26 QEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQAELRKITDLRQRIEDLPIMVELA 85
Query: 88 EEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDKEGAVISITAGAGGTDAQDWA 147
EE D D + EE + +L +D E+ +LSG YD AVI+I +GAGG DA DWA
Sbjct: 86 EEEDG-DTSIAEEE---LADLRSLIDALEVKTMLSGEYDAREAVINIRSGAGGVDAADWA 141
Query: 148 DMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEGRYAYGYLSGEKGTHRIVRQS 207
+ML+RMY RW EK +K + + S EEAGIKSA V G Y YG LS E+G HR+VR S
Sbjct: 142 EMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVHGDYMYGQLSVEQGAHRLVRIS 201
Query: 208 PFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFSRAGGKGGQNVNKVETAVRIT 267
PF+ +G RQTSF+ EV+P++ E+ + IP+ D+ + R+ G GGQ+VN ++AVR+T
Sbjct: 202 PFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDVYRSSGPGGQSVNTTDSAVRLT 260
Query: 268 HIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRASEIKQIRGDAVKAEWGQQIR 327
HIPTG+ V C E+SQ+ NK A+ L+AKLL ++ +E+ + G A WG Q+R
Sbjct: 261 HIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLERKRQEERAEMDAL-GAGGNASWGNQMR 319
Query: 328 NYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKYKYSMSLSA 375
+YV HPY++VKD+RT E +D V+DG+++ +++ ++++ + S SA
Sbjct: 320 SYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLLEAGIRWRMAESQSA 367
>sp|Q04GC3|RF2_OENOB Peptide chain release factor 2 OS=Oenococcus oeni (strain ATCC
BAA-331 / PSU-1) GN=prfB PE=3 SV=1
Length = 372
Score = 292 bits (748), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 221/363 (60%), Gaps = 2/363 (0%)
Query: 8 RKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKDKI 67
R + ++++ R++ L L+ +AE E K + FWD++ AQ+ + +K++
Sbjct: 7 RNSISDMQEQIDGFRSTLDLDALDASIAENEDKMSQPGFWDDQQSAQKIIDETNTLKNRR 66
Query: 68 NLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPYDK 127
+ + ++D + +L E D DA + E + I++ K L+++ L QLL+ YD
Sbjct: 67 DSFLSLQKSVEDLTAMAELLSEED--DADMHAELDTDIEKTEKDLEKYNLNQLLTEKYDS 124
Query: 128 EGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEVEG 187
A++ I G GGT++ DWA L RMY RW + +K V + G+ AGI SA + + G
Sbjct: 125 NNAILEIHPGEGGTESTDWASNLYRMYTRWAQAHDFKVEVTDYQTGDVAGIDSATLRIIG 184
Query: 188 RYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEISFS 247
AYG+L EKG HR VR SPF++ G R TSF +VMP L ++ ++++I +D+++
Sbjct: 185 HNAYGFLRSEKGVHRFVRISPFDSAGRRHTSFVSIDVMPELDDDEIEIEIKPQDVKMDVY 244
Query: 248 RAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQRA 307
R+GG GGQNVNKV TAVR+THIPTG+ V ER+Q N+ A+ LKAKL E++R
Sbjct: 245 RSGGAGGQNVNKVSTAVRLTHIPTGIVVASQVERTQYGNRDIAMKMLKAKLYEQEEQKRE 304
Query: 308 SEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYLKY 367
E ++ G + WG QIR+YVF PY++VKD+R+G+ET D VMDG L+PFI +YLK+
Sbjct: 305 EEHAKLSGTKLDVAWGSQIRSYVFQPYRMVKDLRSGYETGDTDGVMDGNLDPFINAYLKW 364
Query: 368 KYS 370
K S
Sbjct: 365 KLS 367
>sp|Q53915|RF2_STRCO Peptide chain release factor 2 OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=prfB PE=3 SV=2
Length = 368
Score = 291 bits (744), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/363 (41%), Positives = 235/363 (64%), Gaps = 4/363 (1%)
Query: 6 NLRKDVEAASDRVEEIRASAGLQQLEKELAELEMKAADSSFWDNRAEAQETLQALTDVKD 65
++ +++++ S +E I A L +L ++A LE +AA S WD+ AQ+ L+ ++
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDDPEAAQKITSKLSHLQA 64
Query: 66 KINLLTDFKTKMDDAVTIVKLTEEMDSTDAGLLEEAASIIKELNKALDQFELTQLLSGPY 125
++ + ++DD + ++ EE D D EA S + + KALD+ E+ LLSG Y
Sbjct: 65 EVRKAEALRGRIDDLGVLFEMAEEEDDPDT--RAEAESELAAVRKALDEMEVRTLLSGEY 122
Query: 126 DKEGAVISITAGAGGTDAQDWADMLLRMYVRWGEKQRYKTRVVEKSLGEEAGIKSAVIEV 185
D A+++I A AGG DA D+A+ L RMY+RW E+ YKT V E S EEAGIKS V
Sbjct: 123 DAREALVNIRAEAGGVDAADFAEKLQRMYLRWAEQHGYKTEVYETSYAEEAGIKSTTFAV 182
Query: 186 EGRYAYGYLSGEKGTHRIVRQSPFNAKGLRQTSFSGAEVMPLLPEESMDVQIPEEDLEIS 245
+ YAYG LS E+GTHR+VR SPF+ +G RQTSF+G E++P++ E++ ++I E +L +
Sbjct: 183 QSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEILPVV-EQTDHIEIDESELRVD 241
Query: 246 FSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLKAKLLVIAEEQ 305
R+ G GGQ VN ++AVR+THIPTG+ V C ERSQ+ NK A++ L+AKLL ++
Sbjct: 242 VYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQAKLLERRRQE 301
Query: 306 RASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDIVSVMDGELEPFIKSYL 365
+++ ++GD + WG Q+R+YV HPY++VKD+RT HE + +V +GE++ F+++ +
Sbjct: 302 EQAKMDALKGDGGNS-WGNQMRSYVLHPYQMVKDLRTEHEVGNPEAVFNGEIDGFLEAGI 360
Query: 366 KYK 368
+++
Sbjct: 361 RWR 363
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,638,782
Number of Sequences: 539616
Number of extensions: 5341399
Number of successful extensions: 18605
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 124
Number of HSP's that attempted gapping in prelim test: 16124
Number of HSP's gapped (non-prelim): 1143
length of query: 379
length of database: 191,569,459
effective HSP length: 119
effective length of query: 260
effective length of database: 127,355,155
effective search space: 33112340300
effective search space used: 33112340300
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)