BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017010
(379 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ED68|Y1295_ARATH Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis
thaliana GN=At1g22950 PE=2 SV=2
Length = 397
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 216/373 (57%), Positives = 288/373 (77%), Gaps = 1/373 (0%)
Query: 1 MALEASIDRRNHAQSATTNGAVVLPPASYRLRLNPSSEHKPDSYDDLHQLEFTPLLFSSL 60
MAL++S + Q + A +LR P+ EH+P++Y+DL L+++P LF+SL
Sbjct: 10 MALDSSGKQPEQQQQQQPRASSGNGEARLKLRRTPNEEHEPENYEDL-PLDYSPSLFTSL 68
Query: 61 ERYLPPTMLSMSRDVKFQYMRDILMKYSRDGERTRVQRHKEYRQRIISNYQPLHRELFTM 120
ERYLP +L+ +R K +MRD+L++YS D ER RV RHKEYR +I+S+YQ LH E++T+
Sbjct: 69 ERYLPEQLLNSTRIDKASFMRDLLLRYSPDTERVRVLRHKEYRDKIMSSYQRLHGEIYTL 128
Query: 121 HAPSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHD 180
S P+F+ A +E +FRS M E PGI+TFEM +P+FCEMLL+EVE+ E+WV+D
Sbjct: 129 DPSSFFAPSFLGAFSRKSEPNFRSSMVESYPGIFTFEMFKPQFCEMLLAEVEHMEKWVYD 188
Query: 181 TRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVE 240
+R IMRPNTMN FG VLDDFG ++ML KL++DFI PI++V FPEV G++LDSHHG++VE
Sbjct: 189 SRSTIMRPNTMNNFGVVLDDFGFDSMLQKLVDDFISPIAQVLFPEVCGTSLDSHHGYIVE 248
Query: 241 YGMDRDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVP 300
YG DRDV+LGFHVDDSEV+LNVCLG++FSGGEL+FRGVRCDKHVN+++ +E+ DYSHVP
Sbjct: 249 YGKDRDVDLGFHVDDSEVSLNVCLGKQFSGGELYFRGVRCDKHVNSDSTEKEVYDYSHVP 308
Query: 301 GYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQREKKERQC 360
G+A+LHRGRHRHGARATTSG R NL++WCRSS FRE+K YQ++ S WC C+ +K+ RQ
Sbjct: 309 GHAILHRGRHRHGARATTSGHRANLILWCRSSTFREMKNYQRDFSGWCGGCKLDKQRRQR 368
Query: 361 ISIAATKQELLKR 373
SI ATK+ L ++
Sbjct: 369 DSINATKEILARK 381
>sp|Q28C22|OGFD2_XENTR 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Xenopus tropicalis GN=ogfod2 PE=2 SV=1
Length = 349
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 149/265 (56%), Gaps = 19/265 (7%)
Query: 80 MRDILMKYSRDGERTR-VQRHKEYRQRIIS-NYQPLHRELFTMHAPSVLVPAFVKAVR-- 135
R++L ++ ER R + +R+R IS +Y+PL+ E++ + S L F+ AV+
Sbjct: 55 FRNVLETIKKEVERRRKLGEESLHRRREISLHYKPLYPEVYVLQE-SFLAAEFLTAVKYS 113
Query: 136 ----DNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTM 191
N E + + IY + P FC L+ E+ENFER + RPNTM
Sbjct: 114 KSPQANVEGLLHHLHSITDKRIYRLPVFIPEFCAKLVEELENFER----SDLPKGRPNTM 169
Query: 192 NKFGAVLDDFG-LETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELG 250
N +G +L++ G ++ + L +I P++ + FP+ GG LDSH FVV+Y + D++L
Sbjct: 170 NNYGILLNELGFVDALTAPLCEKYIEPLTSLLFPDWGGGCLDSHRAFVVKYALQEDLDLS 229
Query: 251 FHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRH 310
H D++EVTLNV LG+EF+ G L+F ++ + VN T +E H+ G +LHRG+H
Sbjct: 230 CHYDNAEVTLNVSLGKEFTDGNLYFSDMK-EVPVNERTYAE----VEHITGQGILHRGQH 284
Query: 311 RHGARATTSGSRVNLLVWCRSSVFR 335
HGA +SG R NL++W R+S R
Sbjct: 285 VHGALPISSGERWNLILWMRASDVR 309
>sp|Q6N063|OGFD2_HUMAN 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Homo sapiens GN=OGFOD2 PE=2 SV=2
Length = 350
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 143/271 (52%), Gaps = 27/271 (9%)
Query: 93 RTRVQRHKEYRQRII-SNYQPLHRELFTMHAPSVLVPAFVKAVRDNT--EASFRSIMA-- 147
R R+ + R+ +I S+Y P E++ + L P F+ + +A + ++
Sbjct: 71 RQRLGQESAARKALIASSYHPARPEVYDSLQDAALAPEFLAVTEYSVSPDADLKGLLQRL 130
Query: 148 EPIPG---IYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFGL- 203
E + IY + FC+ LL E+E+FE+ + RPNTMN +G +L + GL
Sbjct: 131 ETVSEEKRIYRVPVFTAPFCQALLEELEHFEQ----SDMPKGRPNTMNNYGVLLHELGLD 186
Query: 204 ETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVC 263
E ++ L F++P+ + +P+ GG LDSH FVV+Y +D+ELG H D++E+TLNV
Sbjct: 187 EPLMTPLRERFLQPLMALLYPDCGGGRLDSHRAFVVKYAPGQDLELGCHYDNAELTLNVA 246
Query: 264 LGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRHGARATTSGSRV 323
LG+ F+GG L+F G+ T E L+ HV G VLHRG HGAR +G R
Sbjct: 247 LGKVFTGGALYFGGL-----FQAPTALTEPLEVEHVVGQGVLHRGGQLHGARPLGTGERW 301
Query: 324 NLLVWCRSSVFRELKKYQKECSSWCAECQRE 354
NL+VW R+S R +S C C RE
Sbjct: 302 NLVVWLRASAVR---------NSLCPMCCRE 323
>sp|A3KGZ2|OGFD2_DANRE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Danio rerio GN=ogfod2 PE=2 SV=1
Length = 345
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 145/262 (55%), Gaps = 19/262 (7%)
Query: 80 MRDILMKYSRDGERTRVQRHKEY-RQRIISN-YQPLHRELFTMHAPSVLVPAFVKAVR-- 135
RD++ K + ER + + K R +I Y PLH+ ++ + S L P ++ V+
Sbjct: 51 FRDVIGKIQAEIERRQNHKLKSTERAAVIKEIYTPLHQHVYHLQ-ESFLAPELLEMVKYC 109
Query: 136 ----DNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTM 191
N + + I E ++ F++ + FC+ LL E+E+FE+ + RPNTM
Sbjct: 110 ASSEANVQGLLKLIQTEAASRVFRFQVFRKEFCKDLLEELEHFEQ----SDAPKGRPNTM 165
Query: 192 NKFGAVLDDFGL-ETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELG 250
N +G VL++ G E + L ++RP++ + + + GG+ LDSH FVV+Y M D+ L
Sbjct: 166 NNYGIVLNELGFDEGFITPLREVYLRPLTALLYSDCGGNCLDSHKAFVVKYDMHEDLNLS 225
Query: 251 FHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRH 310
+H D+SEVTLNV LG++F+ G LFF +R E ++ H +LHRG+H
Sbjct: 226 YHYDNSEVTLNVSLGKDFTEGNLFFGDMR-----QVPLSETECVEVEHRVTEGLLHRGQH 280
Query: 311 RHGARATTSGSRVNLLVWCRSS 332
HGA + +SG+R NL++W R+S
Sbjct: 281 MHGALSISSGTRWNLIIWMRAS 302
>sp|Q9CQ04|OGFD2_MOUSE 2-oxoglutarate and iron-dependent oxygenase domain-containing
protein 2 OS=Mus musculus GN=Ogfod2 PE=2 SV=1
Length = 349
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 139/254 (54%), Gaps = 18/254 (7%)
Query: 91 GERTRVQRHKEYRQRII-SNYQPLHRELFTMHAPSVLVPAFVKAVRDNTE--ASFRSIMA 147
G R R+ + R+ +I S+Y P E+++ + L P F+ A +T A ++
Sbjct: 68 GRRRRLGQESAVRKALIASSYHPARPEVYSSLQDAALAPEFMAAAEYSTSPGADLEGLLQ 127
Query: 148 --EPIPG---IYTFEMLQPRFCEMLLSEVENFERWVHDTRFRIMRPNTMNKFGAVLDDFG 202
E + IY + +FC+ LL E+E+FE+ + RPNTMN G ++ + G
Sbjct: 128 RLETVSEEKRIYRVPVFSAKFCQTLLEELEHFEQ----SDMPKGRPNTMNNHGVLMYELG 183
Query: 203 LET-MLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLN 261
L+ ++ L F+ P+ + +P+ GG LDSH FVV+Y + +D++LG H D++E+TLN
Sbjct: 184 LDDPLVTPLRERFLLPLMALLYPDYGGGYLDSHRAFVVKYALGQDLDLGCHYDNAELTLN 243
Query: 262 VCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRHGARATTSGS 321
V LG++F+GG L+F G+ +E L+ HV G +LHRG HGAR G
Sbjct: 244 VALGKDFTGGALYFGGL-----FQAPAALKETLEVEHVVGSGILHRGGQLHGARPLCKGE 298
Query: 322 RVNLLVWCRSSVFR 335
R NL+VW R+S R
Sbjct: 299 RWNLVVWLRASAVR 312
>sp|Q20679|PLOD_CAEEL Procollagen-lysine,2-oxoglutarate 5-dioxygenase OS=Caenorhabditis
elegans GN=let-268 PE=1 SV=1
Length = 730
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%), Gaps = 23/187 (12%)
Query: 145 IMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLDD 200
++ + P +Y F ++ RFCE L+ E+E F RW +D R N + ++
Sbjct: 549 VVDQACPDVYDFPLMSERFCEELIEEMEGFGRWSDGSNNDKRLAGGYENVPTR-DIHMNQ 607
Query: 201 FGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTL 260
G E M+ ++RP+ + F ++S+ FVV Y + L H D S ++
Sbjct: 608 VGFERQWLYFMDTYVRPVQEKTFIGYYHQPVESNMMFVVRYKPEEQPSLRPHHDASTFSI 667
Query: 261 NVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGAR 315
++ L GR++ GG GVR ++ N ++E+ GYA++ GR H H
Sbjct: 668 DIALNKKGRDYEGG-----GVRYIRY-NCTVPADEV-------GYAMMFPGRLTHLHEGL 714
Query: 316 ATTSGSR 322
ATT G+R
Sbjct: 715 ATTKGTR 721
>sp|Q9R0E1|PLOD3_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Mus musculus
GN=Plod3 PE=1 SV=1
Length = 741
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 144 SIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLD 199
++ +P P +Y F +L + C+ L+ E+E++ +W D+R N + +
Sbjct: 560 GLVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQWSGGRHEDSRLAGGYEN-VPTVDIHMK 618
Query: 200 DFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVT 259
G E +L+ ++ P+++ FP T + FVV Y D L H D S T
Sbjct: 619 QVGYEDQWLQLLRTYVGPMTEYLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTFT 677
Query: 260 LNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGA 314
LNV L G ++ GG F +R D +++ + G+A+LH GR H H
Sbjct: 678 LNVALNHKGVDYEGGGCRF--LRYDCRISSPRK-----------GWALLHPGRLTHYHEG 724
Query: 315 RATTSGSR 322
TT G+R
Sbjct: 725 LPTTRGTR 732
>sp|Q5U367|PLOD3_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Rattus
norvegicus GN=Plod3 PE=2 SV=1
Length = 741
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 144 SIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLD 199
++ +P P +Y F +L + C+ L+ E+E++ +W D+R N + +
Sbjct: 560 GLVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQWSGGRHEDSRLAGGYEN-VPTVDIHMK 618
Query: 200 DFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVT 259
G E +L+ ++ P+++ FP T + FVV Y D L H D S T
Sbjct: 619 QVGYEDQWLQLLRTYVGPMTEHLFPGYHTKT-RAVMNFVVRYRPDEQPSLRPHHDSSTFT 677
Query: 260 LNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGA 314
LNV L G ++ GG F +R D V++ + G+A+LH GR H H
Sbjct: 678 LNVALNHKGVDYEGGGCRF--LRYDCRVSSPRK-----------GWALLHPGRLTHYHEG 724
Query: 315 RATTSGSR 322
TT G+R
Sbjct: 725 LPTTRGTR 732
>sp|Q5R6K5|PLOD3_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Pongo abelii
GN=PLOD3 PE=2 SV=1
Length = 738
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 144 SIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLD 199
I+ +P P +Y F +L + C+ L++E+E++ +W D+R N + +
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYEN-VPTVDIHMK 615
Query: 200 DFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVT 259
G E +L+ ++ P+++ FP + + FVV Y D L H D S T
Sbjct: 616 QVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSSTFT 674
Query: 260 LNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGA 314
LNV L G ++ GG F +R D +++ + G+A+LH GR H H
Sbjct: 675 LNVALNHKGLDYEGGGCRF--LRYDCVISSPRK-----------GWALLHPGRLTHYHEG 721
Query: 315 RATTSGSR 322
TT G+R
Sbjct: 722 LPTTWGTR 729
>sp|P24802|PLOD1_CHICK Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Gallus gallus
GN=PLOD1 PE=1 SV=1
Length = 730
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 25/201 (12%)
Query: 132 KAVRDNTEASFRSIMAE-PIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIM 186
K + +N A+ + + E P P +Y F + C+ L+ E+E++ +W D+R +
Sbjct: 536 KYIHENYTAALKGKLVEMPCPDVYWFPIFTDTACDELVEEMEHYGKWSTGDNTDSRIQGG 595
Query: 187 RPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRD 246
N + ++ G E K + D+I PI++ +P T FVV Y D
Sbjct: 596 YEN-VPTIDIHMNQIGFEREWYKFLLDYIAPITEKLYPGYYTKT-QFELAFVVRYKPDEQ 653
Query: 247 VELGFHVDDSEVTLNVCLGR---EFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYA 303
L H D S T+N+ L R ++ GG F C + G+
Sbjct: 654 PSLMPHHDASTFTINIALNRVGIDYEGGGCRFLRYNCSIRAPRK-------------GWT 700
Query: 304 VLHRGR--HRHGARATTSGSR 322
++H GR H H TT G+R
Sbjct: 701 LMHPGRLTHYHEGLPTTKGTR 721
>sp|O60568|PLOD3_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 OS=Homo sapiens
GN=PLOD3 PE=1 SV=1
Length = 738
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 144 SIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLD 199
I+ +P P +Y F +L + C+ L++E+E++ +W D+R N + +
Sbjct: 557 GIVEQPCPDVYWFPLLSEQMCDELVAEMEHYGQWSGGRHEDSRLAGGYEN-VPTVDIHMK 615
Query: 200 DFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVT 259
G E +L+ ++ P+++ FP + + FVV Y D L H D S T
Sbjct: 616 QVGYEDQWLQLLRTYVGPMTESLFPGY-HTKARAVMNFVVRYRPDEQPSLRPHHDSSTFT 674
Query: 260 LNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGA 314
LNV L G ++ GG F +R D +++ + G+A+LH GR H H
Sbjct: 675 LNVALNHKGLDYEGGGCRF--LRYDCVISSPRK-----------GWALLHPGRLTHYHEG 721
Query: 315 RATTSGSR 322
TT G+R
Sbjct: 722 LPTTWGTR 729
>sp|Q9R0B9|PLOD2_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Mus musculus
GN=Plod2 PE=2 SV=2
Length = 737
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 30/200 (15%)
Query: 135 RDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNT 190
RD ++ +I+ +P P ++ F + R C+ L+ E+E++ +W HD+R N
Sbjct: 547 RDYSKIFTENIVEQPCPDVFWFPIFSERACDELVEEMEHYGKWSGGKHHDSRISGGYENV 606
Query: 191 MNKFGAVLDDFGLETMLDKLMNDFIRPIS-KVF--FPEVGGSTLDSHHGFVVEYGMDRDV 247
+ GLE + + +FI P++ KVF + G + L+ FVV+Y +R
Sbjct: 607 PTD-DIHMKQIGLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQR 661
Query: 248 ELGFHVDDSEVTLNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAV 304
L H D S T+N+ L G +F GG F C S G++
Sbjct: 662 SLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIE-------------SPRKGWSF 708
Query: 305 LHRGR--HRHGARATTSGSR 322
+H GR H H +G+R
Sbjct: 709 MHPGRLTHLHEGLPVKNGTR 728
>sp|Q811A3|PLOD2_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Rattus
norvegicus GN=Plod2 PE=2 SV=1
Length = 737
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 135 RDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNT 190
RD ++ +I+ +P P ++ F + R C+ L+ E+E++ +W HD+R N
Sbjct: 547 RDYSKIFTENIVEQPCPDVFWFPIFSERACDELVEEMEHYGKWSGGKHHDSRISGGYENV 606
Query: 191 MNKFGAVLDDFGLETMLDKLMNDFIRPIS-KVF--FPEVGGSTLDSHHGFVVEYGMDRDV 247
+ LE + + +FI P++ KVF + G + L+ FVV+Y +R
Sbjct: 607 PTD-DIHMKQIDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQR 661
Query: 248 ELGFHVDDSEVTLNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAV 304
L H D S T+N+ L G +F GG F C S G++
Sbjct: 662 SLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIE-------------SPRKGWSF 708
Query: 305 LHRGR--HRHGARATTSGSR 322
+H GR H H +G+R
Sbjct: 709 MHPGRLTHLHEGLPVKNGTR 728
>sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens
GN=PLOD2 PE=1 SV=2
Length = 737
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 135 RDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNT 190
RD ++ +I+ +P P ++ F + + C+ L+ E+E++ +W HD+R N
Sbjct: 547 RDYSKIFTENIVEQPCPDVFWFPIFSEKACDELVEEMEHYGKWSGGKHHDSRISGGYENV 606
Query: 191 MNKFGAVLDDFGLETMLDKLMNDFIRPIS-KVF--FPEVGGSTLDSHHGFVVEYGMDRDV 247
+ LE + + +FI P++ KVF + G + L+ FVV+Y +R
Sbjct: 607 PTD-DIHMKQVDLENVWLHFIREFIAPVTLKVFAGYYTKGFALLN----FVVKYSPERQR 661
Query: 248 ELGFHVDDSEVTLNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAV 304
L H D S T+N+ L G +F GG F C S G++
Sbjct: 662 SLRPHHDASTFTINIALNNVGEDFQGGGCKFLRYNCSIE-------------SPRKGWSF 708
Query: 305 LHRGR--HRHGARATTSGSR 322
+H GR H H +G+R
Sbjct: 709 MHPGRLTHLHEGLPVKNGTR 728
>sp|Q5UQC3|PLOD_MIMIV Procollagen lysyl hydroxylase and glycosyltransferase
OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L230 PE=1
SV=1
Length = 895
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 126 LVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVH--DTRF 183
L P F+ +++ + + I + +Y+F + P FC+ ++ ++ W D+ F
Sbjct: 701 LHPEFLSHLQNFKDFDYTEICND----VYSFPLFTPAFCKEVIEVMDKANLWSKGGDSYF 756
Query: 184 --RIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEY 241
RI + L + GL+ ++ +++ P + + T D + FVV+Y
Sbjct: 757 DPRIGGVESYPTQDTQLYEVGLDKQWHYVVFNYVAPFVRHLYNNY--KTKDINLAFVVKY 814
Query: 242 GMDRDVELGFHVDDSEVTLNVCL---GREFSGGELFFRGVRCDKHVNTETQSEEILDYSH 298
M+R EL H D S TLN+ L G+E++ G G +H Q +++
Sbjct: 815 DMERQSELAPHHDSSTYTLNIALNEYGKEYTAG-----GCEFIRH-KFIWQGQKV----- 863
Query: 299 VPGYAVLHRGR--HRHGARATTSGSRVNLL 326
GYA +H G+ H A TSG R L+
Sbjct: 864 --GYATIHAGKLLAYHRALPITSGKRYILV 891
>sp|Q9R0E2|PLOD1_MOUSE Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Mus musculus
GN=Plod1 PE=1 SV=1
Length = 728
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 95/229 (41%), Gaps = 31/229 (13%)
Query: 107 ISNYQP--LHRELFTMHA-PSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRF 163
+ NYQ LH +L+ + + P ++ + T+A ++ P P +Y F +
Sbjct: 509 LDNYQTTHLHNDLWEVFSNPEDWKEKYIH--ENYTKALAGKLVETPCPDVYWFPIFTEAA 566
Query: 164 CEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPIS 219
C+ L+ E+E++ +W D R + N + ++ E K + ++I P++
Sbjct: 567 CDELVEEMEHYGQWSLGDNKDNRIQGGYEN-VPTIDIHMNQITFEREWHKFLVEYIAPMT 625
Query: 220 KVFFPEVGGSTLDSHH-GFVVEYGMDRDVELGFHVDDSEVTLNVCL---GREFSGGELFF 275
+ +P G T FVV Y D L H D S T+N+ L G ++ GG F
Sbjct: 626 EKLYP--GYYTRAQFDLAFVVRYKPDEQPSLMPHHDASTFTVNIALNRVGEDYEGGGCRF 683
Query: 276 RGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGARATTSGSR 322
C + G+A+LH GR H H TT G+R
Sbjct: 684 LRYNCSVRAPRK-------------GWALLHPGRLTHYHEGLPTTKGTR 719
>sp|Q63321|PLOD1_RAT Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Rattus
norvegicus GN=Plod1 PE=2 SV=1
Length = 728
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 29/228 (12%)
Query: 107 ISNYQP--LHRELFTMHA-PSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRF 163
+ NYQ LH +L+ + + P ++ + T+A ++ P P +Y F +
Sbjct: 509 LDNYQTTHLHNDLWEVFSNPQDWKEKYIH--ENYTKALAGKLVETPCPDVYWFPIFTEVA 566
Query: 164 CEMLLSEVENFERWV----HDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPIS 219
C+ L+ E+E++ +W D R + N + ++ E K + ++I P++
Sbjct: 567 CDELVEEMEHYGQWSLGDNKDNRIQGGYEN-VPTIDIHMNQITFEREWHKFLVEYIAPLT 625
Query: 220 KVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCL---GREFSGGELFFR 276
+ +P + FVV Y D L H D S T+N+ L G ++ GG F
Sbjct: 626 EKLYPGY-YTKAQFDLAFVVRYKPDEQPSLMPHHDASTFTINIALNRVGEDYEGGGCRFL 684
Query: 277 GVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR--HRHGARATTSGSR 322
C + G+A++H GR H H TT G+R
Sbjct: 685 RYNCSVRAPRK-------------GWALMHPGRLTHYHEGLPTTKGTR 719
>sp|Q02809|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens
GN=PLOD1 PE=1 SV=2
Length = 727
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 135 RDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNT 190
++ T+A ++ P P +Y F + C+ L+ E+E+F +W D R + N
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGNNKDNRIQGGYEN- 595
Query: 191 MNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHH-GFVVEYGMDRDVEL 249
+ ++ G E K + ++I P+++ +P G T FVV Y D L
Sbjct: 596 VPTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYP--GYYTRAQFDLAFVVRYKPDEQPSL 653
Query: 250 GFHVDDSEVTLNVCLGR---EFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLH 306
H D S T+N+ L R ++ GG F C + G+ ++H
Sbjct: 654 MPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPRK-------------GWTLMH 700
Query: 307 RGR--HRHGARATTSGSR 322
GR H H TT G+R
Sbjct: 701 PGRLTHYHEGLPTTRGTR 718
>sp|Q5R9N3|PLOD1_PONAB Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Pongo abelii
GN=PLOD1 PE=2 SV=1
Length = 727
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 26/198 (13%)
Query: 135 RDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIMRPNT 190
++ T+A ++ P P +Y F + C+ L+ E+E+F +W D R + N
Sbjct: 537 QNYTKALAGKLVETPCPDVYWFPIFTEVACDELVEEMEHFGQWSLGDNKDNRIQGGYEN- 595
Query: 191 MNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHH-GFVVEYGMDRDVEL 249
+ ++ G E K + ++I P+++ +P G T FVV Y D L
Sbjct: 596 VPTIDIHMNQIGFEREWHKFLLEYIAPMTEKLYP--GYYTRAQFDLAFVVRYKPDEQPSL 653
Query: 250 GFHVDDSEVTLNVCLGR---EFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLH 306
H D S T+N+ L R ++ GG F C + G+ ++H
Sbjct: 654 MPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPRK-------------GWTLMH 700
Query: 307 RGR--HRHGARATTSGSR 322
GR H H TT G+R
Sbjct: 701 PGRLTHYHEGLPTTRGTR 718
>sp|O77588|PLOD1_BOVIN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Bos taurus
GN=PLOD1 PE=2 SV=2
Length = 726
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 27/202 (13%)
Query: 132 KAVRDNTEASFRSIMAE-PIPGIYTFEMLQPRFCEMLLSEVENFERWV----HDTRFRIM 186
K + +N + M E P P +Y F + C+ L+ E+E++ +W D R +
Sbjct: 532 KYIHENYTKALAGKMVEMPCPDVYWFPIFTETACDELVEEMEHYGQWSLGDNKDNRIQGG 591
Query: 187 RPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHH-GFVVEYGMDR 245
N + ++ E K + ++I P+++ +P G T FVV Y D
Sbjct: 592 YEN-VPTIDIHMNQINFEREWHKFLVEYIAPMTEKLYP--GYYTRAQFDLAFVVRYKPDE 648
Query: 246 DVELGFHVDDSEVTLNVCLGR---EFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGY 302
L H D S T+N+ L R ++ GG F C + G+
Sbjct: 649 QPSLVPHHDASTFTINIALNRVGVDYEGGGCRFLRYNCSIRAPRK-------------GW 695
Query: 303 AVLHRGR--HRHGARATTSGSR 322
++H GR H H TT G+R
Sbjct: 696 TLMHPGRLTHYHEGLPTTKGTR 717
>sp|Q087U3|Y612_SHEFN PKHD-type hydroxylase Sfri_0612 OS=Shewanella frigidimarina (strain
NCIMB 400) GN=Sfri_0612 PE=3 SV=1
Length = 226
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 29/102 (28%)
Query: 248 ELGFHVDD-------------SEVTLNVCLGR--EFSGGELFFRGVRCDKHVNTETQSEE 292
E G+HVD S+V++ V L E+ GGEL + TE ++
Sbjct: 91 EYGYHVDAAIMRIPNTSEVIRSDVSMTVFLSEPEEYDGGELV---------IATEFGQQQ 141
Query: 293 ILDYSHVP-GYAVLHRGRHRHGARATTSGSRVNLLVWCRSSV 333
I +P GYAV++ H A T G R+ + W +S V
Sbjct: 142 I----KLPAGYAVVYPSSSLHKVTAVTRGQRIAAITWMQSMV 179
>sp|Q7VP04|RLMKL_HAEDU Ribosomal RNA large subunit methyltransferase K/L OS=Haemophilus
ducreyi (strain 35000HP / ATCC 700724) GN=rlmL PE=3 SV=2
Length = 712
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 251 FHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRH 310
F+V++ L V L G +F K V + + L+ G A +H H
Sbjct: 509 FYVNEYGAKLWVNLTDYLDTG-IFLDHRLTRKMVGQMAKGKTFLNLFAYTGSATIHAALH 567
Query: 311 RHGARATTSGSRVN-LLVWCRSSV------FRELKKYQKECSSWCAECQREKKE 357
GA+ATTS N L W ++ R + +Q +C W AEC RE+ E
Sbjct: 568 --GAKATTSVDMSNTYLNWAEQNLELNGLKSRNHRLFQADCLQWLAEC-RERFE 618
>sp|B5XT12|Y3192_KLEP3 PKHD-type hydroxylase KPK_3192 OS=Klebsiella pneumoniae (strain
342) GN=KPK_3192 PE=3 SV=1
Length = 225
Score = 32.3 bits (72), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 43/119 (36%), Gaps = 17/119 (14%)
Query: 216 RPISKVFFPEVG-GSTLDSHHGFVVEYGMDRDVELGFHVDDSEVTLNVCLGREFSGGELF 274
R IS F G G T +GF V+ + ++ E G+ D TL +C + GGEL
Sbjct: 77 RTISAPLFNRYGPGET----YGFHVDGAVRQNAEAGWMRTDLSATLFLCDPESYEGGELV 132
Query: 275 FRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSV 333
V G+ VL+ H T G R +W +S V
Sbjct: 133 IEDTYGQHRVKLPA------------GHLVLYPASSLHCVTPVTHGVRQASFLWIQSMV 179
>sp|A3QCQ6|CHEZ_SHELP Protein phosphatase CheZ OS=Shewanella loihica (strain ATCC
BAA-1088 / PV-4) GN=cheZ PE=3 SV=1
Length = 245
Score = 32.0 bits (71), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 202 GLETMLDKLMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMD-RDVELG 250
G + M D+L+ D PI K F EVG T H +V++ +D R VEL
Sbjct: 24 GQQEMADELIRDIASPIQKELFDEVGRLTRQLHSA-IVDFQVDGRLVELA 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,708,706
Number of Sequences: 539616
Number of extensions: 5789592
Number of successful extensions: 13226
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 13182
Number of HSP's gapped (non-prelim): 27
length of query: 379
length of database: 191,569,459
effective HSP length: 119
effective length of query: 260
effective length of database: 127,355,155
effective search space: 33112340300
effective search space used: 33112340300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)