Query 017010
Match_columns 379
No_of_seqs 204 out of 315
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 07:27:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dkq_A PKHD-type hydroxylase S 99.7 3.3E-17 1.1E-21 155.2 11.1 163 151-336 19-199 (243)
2 2jig_A Prolyl-4 hydroxylase; h 99.7 4.8E-17 1.6E-21 150.0 11.9 174 150-335 19-221 (224)
3 3itq_A Prolyl 4-hydroxylase, a 99.7 4.3E-17 1.5E-21 151.8 11.1 156 150-334 38-215 (216)
4 2hbt_A EGL nine homolog 1; pro 99.2 1.5E-10 5E-15 109.4 15.5 169 151-338 26-220 (247)
5 3kt7_A PKHD-type hydroxylase T 98.0 8.3E-05 2.8E-09 78.6 14.7 199 123-333 13-230 (633)
6 2a1x_A Phytanoyl-COA dioxygena 97.6 0.0011 3.8E-08 62.6 14.1 84 249-332 142-255 (308)
7 2rdq_A 1-deoxypentalenic acid 97.5 0.001 3.4E-08 62.0 13.1 87 246-332 134-253 (288)
8 2rg4_A Uncharacterized protein 97.5 0.00068 2.3E-08 62.4 11.3 93 235-329 104-205 (216)
9 2opw_A Phyhd1 protein; double- 97.3 0.003 1E-07 59.0 13.1 89 243-331 147-266 (291)
10 2fct_A Syringomycin biosynthes 97.2 0.0055 1.9E-07 57.9 14.2 44 292-335 218-264 (313)
11 3gja_A CYTC3; halogenase, beta 96.9 0.0049 1.7E-07 59.5 10.3 44 292-335 220-266 (319)
12 3emr_A ECTD; double stranded b 96.6 0.0073 2.5E-07 58.1 9.3 175 152-332 47-269 (310)
13 3nnf_A CURA; non-HAEM Fe(II)/a 94.9 0.053 1.8E-06 53.3 7.3 177 152-335 41-278 (344)
14 3s57_A Alpha-ketoglutarate-dep 94.2 0.44 1.5E-05 43.3 11.5 158 152-327 12-199 (204)
15 3tht_A Alkylated DNA repair pr 94.0 0.16 5.5E-06 50.1 8.8 143 147-318 107-274 (345)
16 2iuw_A Alkylated repair protei 93.4 0.32 1.1E-05 45.1 9.3 160 151-328 40-227 (238)
17 3pl0_A Uncharacterized protein 87.9 0.43 1.5E-05 45.3 4.4 77 248-334 162-250 (254)
18 3i3q_A Alpha-ketoglutarate-dep 87.4 1.2 4.2E-05 40.8 7.1 80 235-328 106-200 (211)
19 1gp6_A Leucoanthocyanidin diox 83.0 2.6 8.8E-05 41.1 7.4 79 238-332 214-308 (356)
20 1w9y_A 1-aminocyclopropane-1-c 82.4 2.8 9.6E-05 40.3 7.3 80 238-332 159-254 (319)
21 3on7_A Oxidoreductase, iron/as 81.4 2.3 7.8E-05 40.1 6.1 80 238-332 154-255 (280)
22 1dcs_A Deacetoxycephalosporin 78.5 3.4 0.00012 39.5 6.4 81 238-332 161-268 (311)
23 3oox_A Putative 2OG-Fe(II) oxy 78.2 3.2 0.00011 39.5 6.1 80 238-332 173-272 (312)
24 1odm_A Isopenicillin N synthas 78.1 3.2 0.00011 39.9 6.1 70 246-332 208-289 (331)
25 1r26_A Thioredoxin; redox-acti 72.0 1.4 4.9E-05 35.6 1.6 50 308-357 3-58 (125)
26 3rcq_A Aspartyl/asparaginyl be 70.8 5.1 0.00017 36.5 5.1 75 236-329 104-181 (197)
27 1oih_A Putative alkylsulfatase 47.0 55 0.0019 30.3 7.9 32 246-277 102-139 (301)
28 1ilo_A Conserved hypothetical 46.5 5.9 0.0002 28.2 0.8 13 344-356 7-19 (77)
29 2ozj_A Cupin 2, conserved barr 40.9 74 0.0025 24.5 6.6 34 296-330 78-111 (114)
30 1nho_A Probable thioredoxin; b 37.5 9 0.00031 27.4 0.6 12 345-356 10-21 (85)
31 1otj_A Alpha-ketoglutarate-dep 36.7 1.4E+02 0.0046 27.2 8.7 42 236-277 82-130 (283)
32 3die_A Thioredoxin, TRX; elect 36.5 11 0.00036 28.1 0.9 11 346-356 29-39 (106)
33 2vim_A Thioredoxin, TRX; thior 36.3 10 0.00036 28.0 0.8 11 346-356 29-39 (104)
34 4i4a_A Similar to unknown prot 35.9 90 0.0031 24.4 6.5 40 296-335 74-113 (128)
35 3kp8_A Vkorc1/thioredoxin doma 34.6 11 0.00039 29.7 0.8 13 344-356 20-32 (106)
36 1fo5_A Thioredoxin; disulfide 34.3 11 0.00036 27.1 0.5 12 345-356 11-22 (85)
37 1fb6_A Thioredoxin M; electron 34.0 12 0.00041 27.8 0.8 11 346-356 28-38 (105)
38 2voc_A Thioredoxin; electron t 33.9 15 0.0005 28.3 1.3 12 346-357 27-38 (112)
39 3tco_A Thioredoxin (TRXA-1); d 33.7 12 0.00042 27.8 0.8 12 345-356 30-41 (109)
40 2pu9_C TRX-F, thioredoxin F-ty 33.1 12 0.00043 28.4 0.8 13 345-357 33-45 (111)
41 3uvt_A Thioredoxin domain-cont 32.8 13 0.00044 27.9 0.8 10 346-355 31-40 (111)
42 1faa_A Thioredoxin F; electron 32.5 13 0.00044 28.9 0.8 12 346-357 47-58 (124)
43 3m9j_A Thioredoxin; oxidoreduc 32.4 13 0.00045 27.6 0.8 11 346-356 30-40 (105)
44 2djj_A PDI, protein disulfide- 32.0 14 0.00047 28.4 0.9 11 346-356 35-45 (121)
45 2e0q_A Thioredoxin; electron t 31.9 14 0.00046 27.1 0.8 11 346-356 26-36 (104)
46 1nsw_A Thioredoxin, TRX; therm 31.6 14 0.00047 27.6 0.8 11 346-356 27-37 (105)
47 2trx_A Thioredoxin; electron t 31.0 14 0.00049 27.6 0.8 11 346-356 30-40 (108)
48 3d6i_A Monothiol glutaredoxin- 31.0 14 0.00047 28.1 0.7 12 345-356 30-41 (112)
49 3f3q_A Thioredoxin-1; His TAG, 30.9 14 0.00049 28.3 0.8 11 346-356 34-44 (109)
50 1ep7_A Thioredoxin CH1, H-type 30.8 14 0.00049 27.8 0.8 12 345-356 33-44 (112)
51 1mek_A Protein disulfide isome 30.5 14 0.00048 27.9 0.7 12 346-357 34-45 (120)
52 2xc2_A Thioredoxinn; oxidoredu 30.4 15 0.0005 28.3 0.8 12 345-356 42-53 (117)
53 1dby_A Chloroplast thioredoxin 30.3 15 0.00051 27.5 0.8 11 346-356 29-39 (107)
54 2kuc_A Putative disulphide-iso 30.2 15 0.00052 28.6 0.9 12 345-356 36-47 (130)
55 1t00_A Thioredoxin, TRX; redox 30.2 15 0.00051 27.8 0.8 11 346-356 33-43 (112)
56 2yzu_A Thioredoxin; redox prot 30.2 15 0.00051 27.2 0.8 11 346-356 28-38 (109)
57 4euy_A Uncharacterized protein 30.2 15 0.00051 27.8 0.8 10 346-355 28-37 (105)
58 1xwb_A Thioredoxin; dimerizati 29.9 15 0.00052 27.2 0.8 12 345-356 29-40 (106)
59 1gh2_A Thioredoxin-like protei 29.9 15 0.00052 27.6 0.8 12 345-356 30-41 (107)
60 2k8s_A Thioredoxin; dimer, str 29.5 15 0.00051 26.8 0.7 12 345-356 9-20 (80)
61 1nx8_A CARC, carbapenem syntha 29.5 23 0.00078 32.3 2.1 32 247-278 96-135 (273)
62 1zma_A Bacterocin transport ac 29.4 16 0.00054 28.3 0.8 12 345-356 38-49 (118)
63 1syr_A Thioredoxin; SGPP, stru 29.3 16 0.00054 28.0 0.8 12 346-357 36-47 (112)
64 1zzo_A RV1677; thioredoxin fol 29.2 16 0.00054 28.1 0.8 11 346-356 35-45 (136)
65 1thx_A Thioredoxin, thioredoxi 29.1 16 0.00056 27.4 0.9 11 346-356 35-45 (115)
66 3gnj_A Thioredoxin domain prot 28.5 17 0.00057 27.3 0.8 10 346-355 32-41 (111)
67 1x5e_A Thioredoxin domain cont 28.5 17 0.00057 28.4 0.8 12 346-357 32-43 (126)
68 3aps_A DNAJ homolog subfamily 28.4 17 0.00057 28.0 0.8 11 346-356 31-41 (122)
69 2dml_A Protein disulfide-isome 28.3 18 0.00063 28.1 1.1 12 346-357 45-56 (130)
70 3ul3_B Thioredoxin, thioredoxi 28.2 17 0.00058 28.7 0.8 11 346-356 52-62 (128)
71 2l6c_A Thioredoxin; oxidoreduc 28.1 17 0.00059 27.9 0.8 11 346-356 29-39 (110)
72 1xvw_A Hypothetical protein RV 28.1 28 0.00097 28.1 2.2 22 319-354 34-55 (160)
73 3qfa_C Thioredoxin; protein-pr 28.0 17 0.00059 28.3 0.8 12 345-356 40-51 (116)
74 2oe3_A Thioredoxin-3; electron 27.8 17 0.00059 28.3 0.8 12 346-357 40-51 (114)
75 1lu4_A Soluble secreted antige 27.7 17 0.0006 28.0 0.8 11 346-356 34-44 (136)
76 1w4v_A Thioredoxin, mitochondr 27.6 18 0.0006 28.2 0.8 11 346-356 41-51 (119)
77 2i4a_A Thioredoxin; acidophIle 27.5 18 0.00061 26.8 0.8 11 346-356 30-40 (107)
78 3fk8_A Disulphide isomerase; A 27.3 18 0.00061 28.5 0.8 12 345-356 38-49 (133)
79 2l57_A Uncharacterized protein 27.0 18 0.00063 28.1 0.8 11 346-356 36-46 (126)
80 2f51_A Thioredoxin; electron t 27.0 18 0.00062 28.3 0.8 12 345-356 32-43 (118)
81 2fwh_A Thiol:disulfide interch 26.7 18 0.00063 28.8 0.8 11 345-355 40-50 (134)
82 1xfl_A Thioredoxin H1; AT3G510 26.7 19 0.00064 28.6 0.8 13 344-356 46-58 (124)
83 2e7p_A Glutaredoxin; thioredox 26.6 18 0.00061 27.9 0.7 11 346-356 28-38 (116)
84 2l5l_A Thioredoxin; structural 26.6 19 0.00064 28.8 0.8 11 346-356 48-58 (136)
85 1x5d_A Protein disulfide-isome 26.4 19 0.00064 28.0 0.8 11 346-356 35-45 (133)
86 3hxs_A Thioredoxin, TRXP; elec 26.4 19 0.00066 28.5 0.9 10 346-355 61-70 (141)
87 1ti3_A Thioredoxin H, PTTRXH1; 26.2 20 0.00067 27.0 0.8 12 345-356 35-46 (113)
88 2j23_A Thioredoxin; immune pro 26.0 19 0.00066 28.1 0.8 11 346-356 43-53 (121)
89 3or5_A Thiol:disulfide interch 26.0 19 0.00066 28.9 0.8 11 346-356 44-54 (165)
90 3erw_A Sporulation thiol-disul 26.0 20 0.00067 28.0 0.8 11 346-356 44-54 (145)
91 3h79_A Thioredoxin-like protei 25.9 20 0.00067 28.2 0.8 11 346-356 43-53 (127)
92 2lja_A Putative thiol-disulfid 25.9 22 0.00075 28.3 1.1 11 346-356 40-50 (152)
93 1kng_A Thiol:disulfide interch 25.9 20 0.00067 28.6 0.8 10 346-355 52-61 (156)
94 2vlu_A Thioredoxin, thioredoxi 25.8 20 0.00068 27.6 0.8 12 345-356 43-54 (122)
95 2dj3_A Protein disulfide-isome 25.8 20 0.00067 28.1 0.8 11 346-356 35-45 (133)
96 4evm_A Thioredoxin family prot 25.7 20 0.00069 27.3 0.8 10 346-355 32-41 (138)
97 1yhf_A Hypothetical protein SP 25.6 1.3E+02 0.0046 22.8 5.7 31 297-328 81-111 (115)
98 2vm1_A Thioredoxin, thioredoxi 25.6 20 0.00069 27.1 0.8 12 345-356 37-48 (118)
99 2yj7_A LPBCA thioredoxin; oxid 31.2 15 0.00051 27.0 0.0 11 346-356 29-39 (106)
100 2b5x_A YKUV protein, TRXY; thi 25.1 21 0.00071 27.9 0.8 10 346-355 39-48 (148)
101 3emx_A Thioredoxin; structural 24.9 21 0.00071 28.6 0.8 10 346-355 41-50 (135)
102 2dj1_A Protein disulfide-isome 24.7 21 0.00072 28.2 0.8 11 346-356 44-54 (140)
103 3pvj_A Alpha-ketoglutarate-dep 24.6 1.9E+02 0.0066 26.6 7.5 32 246-277 91-128 (277)
104 2ju5_A Thioredoxin disulfide i 24.4 21 0.00073 29.4 0.8 12 345-356 57-68 (154)
105 3raz_A Thioredoxin-related pro 24.4 22 0.00074 28.6 0.8 11 346-356 34-44 (151)
106 2dbn_A Hypothetical protein YB 24.2 53 0.0018 33.7 3.8 45 297-357 370-414 (461)
107 2i1u_A Thioredoxin, TRX, MPT46 24.2 22 0.00076 27.1 0.8 11 346-356 40-50 (121)
108 3ewl_A Uncharacterized conserv 24.2 19 0.00066 28.3 0.5 10 346-355 37-46 (142)
109 3hcz_A Possible thiol-disulfid 24.2 21 0.00073 27.9 0.7 11 346-356 41-51 (148)
110 3d22_A TRXH4, thioredoxin H-ty 24.2 22 0.00075 28.2 0.8 12 345-356 55-66 (139)
111 1i5g_A Tryparedoxin II; electr 23.8 23 0.00077 28.1 0.8 10 346-355 38-47 (144)
112 2o8v_B Thioredoxin 1; disulfid 23.8 23 0.00077 28.3 0.8 12 345-356 49-60 (128)
113 3fkf_A Thiol-disulfide oxidore 23.6 23 0.00077 27.8 0.8 10 346-355 43-52 (148)
114 2dj0_A Thioredoxin-related tra 23.4 23 0.00079 28.2 0.8 13 345-357 35-47 (137)
115 3gix_A Thioredoxin-like protei 23.3 23 0.00079 29.3 0.8 12 345-356 32-43 (149)
116 3cxg_A Putative thioredoxin; m 23.2 23 0.0008 28.4 0.8 12 345-356 49-60 (133)
117 2bnm_A Epoxidase; oxidoreducta 23.2 2.6E+02 0.009 23.5 7.7 22 296-317 164-185 (198)
118 2opk_A Hypothetical protein; p 23.0 2.1E+02 0.007 22.4 6.5 33 296-328 75-109 (112)
119 3hz4_A Thioredoxin; NYSGXRC, P 22.9 24 0.00083 28.4 0.8 11 346-356 34-44 (140)
120 3eur_A Uncharacterized protein 22.8 25 0.00084 27.9 0.8 11 346-356 41-51 (142)
121 1wmj_A Thioredoxin H-type; str 22.7 21 0.00071 27.7 0.4 12 345-356 45-56 (130)
122 2h30_A Thioredoxin, peptide me 22.5 25 0.00085 28.3 0.8 11 346-356 48-58 (164)
123 3eyt_A Uncharacterized protein 22.3 22 0.00074 28.6 0.4 9 346-354 38-46 (158)
124 1ego_A Glutaredoxin; electron 22.0 25 0.00087 25.3 0.7 12 346-357 9-20 (85)
125 1o73_A Tryparedoxin; electron 22.0 26 0.00088 27.6 0.8 11 346-356 38-48 (144)
126 3lor_A Thiol-disulfide isomera 21.8 22 0.00077 28.5 0.4 9 346-354 40-48 (160)
127 3f9u_A Putative exported cytoc 21.7 26 0.00089 29.0 0.8 10 345-354 56-65 (172)
128 1z6n_A Hypothetical protein PA 21.7 24 0.00081 30.4 0.6 12 345-356 63-74 (167)
129 1sen_A Thioredoxin-like protei 21.6 26 0.0009 29.4 0.8 14 344-357 54-67 (164)
130 2f9s_A Thiol-disulfide oxidore 21.3 27 0.00093 27.8 0.8 10 346-355 36-45 (151)
131 3gl3_A Putative thiol:disulfid 21.3 28 0.00094 27.6 0.9 10 346-355 38-47 (152)
132 3ha9_A Uncharacterized thiored 21.3 28 0.00094 28.3 0.9 10 346-355 47-56 (165)
133 3iv4_A Putative oxidoreductase 21.2 23 0.00079 29.4 0.4 13 345-357 33-45 (112)
134 2lrn_A Thiol:disulfide interch 21.1 28 0.00096 27.9 0.9 10 346-355 39-48 (152)
135 3zzx_A Thioredoxin; oxidoreduc 21.1 28 0.00095 27.3 0.8 11 345-355 29-39 (105)
136 2l5o_A Putative thioredoxin; s 20.8 29 0.00099 27.5 0.9 10 346-355 38-47 (153)
137 2lus_A Thioredoxion; CR-Trp16, 26.2 21 0.00071 28.0 0.0 11 346-356 36-46 (143)
138 1o8x_A Tryparedoxin, TRYX, TXN 20.7 28 0.00097 27.7 0.8 10 346-355 38-47 (146)
139 2gu9_A Tetracenomycin polyketi 20.6 2.6E+02 0.009 20.6 6.5 25 296-320 64-88 (113)
140 3kcm_A Thioredoxin family prot 20.5 29 0.00099 27.6 0.8 11 346-356 38-48 (154)
141 2wz9_A Glutaredoxin-3; protein 20.5 29 0.00098 28.4 0.8 12 345-356 41-52 (153)
142 2lst_A Thioredoxin; structural 25.5 22 0.00075 27.8 0.0 12 345-356 28-39 (130)
No 1
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.70 E-value=3.3e-17 Score=155.21 Aligned_cols=163 Identities=17% Similarity=0.312 Sum_probs=110.4
Q ss_pred CeEEEec-CCCHHHHHHHHHHHHhcccccccCCc-cccccCCCCccceeccccChH-HHHHHHHHHhhhhhhhhcCCCcc
Q 017010 151 PGIYTFE-MLQPRFCEMLLSEVENFERWVHDTRF-RIMRPNTMNKFGAVLDDFGLE-TMLDKLMNDFIRPISKVFFPEVG 227 (379)
Q Consensus 151 P~Vy~fp-vfsp~fC~~LIeE~E~fg~ws~~s~~-~i~rpn~mN~ygvvLdd~Gl~-~~~~~Ll~~yl~Pl~~~lfp~~~ 227 (379)
+.++.+| |||+++|++||+.++.- .|..+... ...-....||..+..++. +. .+++.+.. .+.. - |.+.
T Consensus 19 ~~i~~i~dvLs~~Ec~~li~~~e~~-~~~dg~~t~g~~~~~vr~n~~l~~d~~-~~~~l~~~i~~-~l~~----~-~~f~ 90 (243)
T 3dkq_A 19 GMLIEIPNVFSKQEVSHLREQLDAR-RWIDGNQTSGAMATTRKRNQQLDKDDP-VAVALGQQIMD-RLLA----H-PQFV 90 (243)
T ss_dssp TTBEEECCSSCHHHHHHHHHHHHTS-CCEEECCCSSBSSCCCEEEEECCTTCH-HHHHHHHHHHH-HHHT----C-HHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHhhC-CCccCcccCCCccccceeeeEECCCCH-HHHHHHHHHHH-HHcc----C-cchh
Confidence 5677775 99999999999999863 45432211 111123345544444443 32 33433332 2211 0 0011
Q ss_pred CCCCC--ccceeEEEEeCCCCCCccccccCC-----------ceeEEEecCC--cccccceEEecccccccccccccccc
Q 017010 228 GSTLD--SHHGFVVEYGMDRDVELGFHVDDS-----------EVTLNVCLGR--EFSGGELFFRGVRCDKHVNTETQSEE 292 (379)
Q Consensus 228 g~~Ld--sh~~FVVrY~~~~d~~L~~H~D~S-----------evTlNI~Ln~--dFeGGgl~F~~~~c~~~v~~~~~~~e 292 (379)
..+|. .....+.+|.+++ .+++|+|.+ .+|+.++||+ +|+||+|.|......
T Consensus 91 ~~~L~~~~e~~~~~rY~~G~--~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~----------- 157 (243)
T 3dkq_A 91 SAALPLQFYPPLFNRYQGGE--TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQ----------- 157 (243)
T ss_dssp HHHCEEEEEEEEEEEECTTC--EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEE-----------
T ss_pred hcccccccccceEEEECCCC--eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCc-----------
Confidence 11111 2234589999976 999999963 5899999998 999999999974321
Q ss_pred eeeccCCCceEEEecCCCCcCCccCCccceeEEEeecchhhHHH
Q 017010 293 ILDYSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRE 336 (379)
Q Consensus 293 ~~~y~~~~G~AllH~Grh~HeglpVTsG~Ry~LV~W~rss~~R~ 336 (379)
..++|++|.+|+|++..+|+|.|||+|+||+++.|++|. +|+
T Consensus 158 -~~V~P~~G~~v~F~s~~lH~v~pV~~G~R~~~~~Wi~s~-vr~ 199 (243)
T 3dkq_A 158 -QSIKLSAGSLVLYPSSSLHQVTPVLSGERTAAFMWLQSM-VRD 199 (243)
T ss_dssp -EEECCCTTCEEEEETTSEEEECCEEEECEEEEEEEEEES-CCC
T ss_pred -EEEecCCCEEEEECCCCeEcCccccccCEEEEEEehhhc-cCC
Confidence 346899999999999999999999999999999999986 454
No 2
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.70 E-value=4.8e-17 Score=149.96 Aligned_cols=174 Identities=15% Similarity=0.212 Sum_probs=110.9
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHh-ccc--ccccCCccccccCCCCccceeccccChHHHHHHHHHHhhhhhhhhcCCC
Q 017010 150 IPGIYTFE-MLQPRFCEMLLSEVEN-FER--WVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPE 225 (379)
Q Consensus 150 ~P~Vy~fp-vfsp~fC~~LIeE~E~-fg~--ws~~s~~~i~rpn~mN~ygvvLdd~Gl~~~~~~Ll~~yl~Pl~~~lfp~ 225 (379)
.|.|+.++ |||+++|+.||+.++. +.. |..+..-.....+.++...+.+++-. +.....+. +.|..++. +|
T Consensus 19 ~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~-~~~~~~i~-~ri~~~~g--l~- 93 (224)
T 2jig_A 19 SPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGE-DSVISKIE-KRVAQVTM--IP- 93 (224)
T ss_dssp TTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTC-SHHHHHHH-HHHHHHHT--CC-
T ss_pred CCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCC-CHHHHHHH-HHHHHHhC--CC-
Confidence 58888885 9999999999999985 322 22111000111233444455555311 12222222 22322221 11
Q ss_pred ccCCCCCccceeEEEEeCCCCCCccccccCC--------------ceeEEEecCCcccccceEEeccccccc--cccccc
Q 017010 226 VGGSTLDSHHGFVVEYGMDRDVELGFHVDDS--------------EVTLNVCLGREFSGGELFFRGVRCDKH--VNTETQ 289 (379)
Q Consensus 226 ~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S--------------evTlNI~Ln~dFeGGgl~F~~~~c~~~--v~~~~~ 289 (379)
+. ... ..-|++|.+++ ++.+|+|.. .+|+.|+||+..+||+|.|........ .-++.
T Consensus 94 ~~---~~e-~~qv~rY~~G~--~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c- 166 (224)
T 2jig_A 94 LE---NHE-GLQVLHYHDGQ--KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSEC- 166 (224)
T ss_dssp GG---GBC-CCEEEEEETTC--CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTT-
T ss_pred cc---ccc-ceEEEecCCCc--cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCccccccccccccc-
Confidence 11 111 23379999977 899999942 389999999999999999986530000 00000
Q ss_pred ccceeeccCCCceEEEecC---------CCCcCCccCCccceeEEEeecchhhHH
Q 017010 290 SEEILDYSHVPGYAVLHRG---------RHRHGARATTSGSRVNLLVWCRSSVFR 335 (379)
Q Consensus 290 ~~e~~~y~~~~G~AllH~G---------rh~HeglpVTsG~Ry~LV~W~rss~~R 335 (379)
.+....+.|++|.||+|+. +.+|+|.||++|+||++..|+++..||
T Consensus 167 ~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~~~~ 221 (224)
T 2jig_A 167 AKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWIHVAPIG 221 (224)
T ss_dssp GGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEEESSCCC
T ss_pred ccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeEEcCCcC
Confidence 0123568999999999986 799999999999999999999998765
No 3
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.70 E-value=4.3e-17 Score=151.78 Aligned_cols=156 Identities=24% Similarity=0.310 Sum_probs=107.4
Q ss_pred CCeEEEec-CCCHHHHHHHHHHHHh-cccccccCCccccccCCCCccceeccccChHHHHHHHHHHhhhhhhhhcCCCcc
Q 017010 150 IPGIYTFE-MLQPRFCEMLLSEVEN-FERWVHDTRFRIMRPNTMNKFGAVLDDFGLETMLDKLMNDFIRPISKVFFPEVG 227 (379)
Q Consensus 150 ~P~Vy~fp-vfsp~fC~~LIeE~E~-fg~ws~~s~~~i~rpn~mN~ygvvLdd~Gl~~~~~~Ll~~yl~Pl~~~lfp~~~ 227 (379)
.|.|+.++ |||+++|+.||+..+. +....-+.+ ......++..++-|++ +.....+. +.|..++.. | ..
T Consensus 38 ~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~--~~~~~~RtS~~~wl~~---~~~v~~i~-~Ri~~~~gl--~-~~ 108 (216)
T 3itq_A 38 EPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS--RDVNDIRTSSGAFLDD---NELTAKIE-KRISSIMNV--P-AS 108 (216)
T ss_dssp TTTEEEEESCSCHHHHHHHHHHHHHHHC----------CCCCGGGTTCEECCC---CHHHHHHH-HHHHHHHTS--C-GG
T ss_pred CCCEEEECCcCCHHHHHHHHHHhhcccccceeccC--CccCCcEeeeeEEeCC---cHHHHHHH-HHHHHhcCc--e-ec
Confidence 69999995 9999999999999885 333100011 0112233444566666 22222222 233332211 1 11
Q ss_pred CCCCCccceeEEEEeCCCCCCccccccCC-----------ceeEEEecCCcccccceEEecccccccccccccccceeec
Q 017010 228 GSTLDSHHGFVVEYGMDRDVELGFHVDDS-----------EVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDY 296 (379)
Q Consensus 228 g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S-----------evTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y 296 (379)
..-...+++|.+++ ++.+|+|.. .+|+.++||+.++||+|.|...+. .+
T Consensus 109 ----~~E~lqv~~Y~~G~--~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~--------------~V 168 (216)
T 3itq_A 109 ----HGEGLHILNYEVDQ--QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNL--------------SV 168 (216)
T ss_dssp ----GBCCCEEEEECBTC--CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTE--------------EE
T ss_pred ----cccceeEEEeCCCC--ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCC--------------EE
Confidence 11123489999976 899999954 289999999999999999987542 35
Q ss_pred cCCCceEEEecC---------CCCcCCccCCccceeEEEeecchhhH
Q 017010 297 SHVPGYAVLHRG---------RHRHGARATTSGSRVNLLVWCRSSVF 334 (379)
Q Consensus 297 ~~~~G~AllH~G---------rh~HeglpVTsG~Ry~LV~W~rss~~ 334 (379)
.|++|.||+|+. +.+|+|.||++|+||++..|+|...|
T Consensus 169 ~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~~~~ 215 (216)
T 3itq_A 169 HPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWVRRGTY 215 (216)
T ss_dssp CCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEEESSCC
T ss_pred ecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeEecCCc
Confidence 799999999998 79999999999999999999998755
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.23 E-value=1.5e-10 Score=109.35 Aligned_cols=169 Identities=19% Similarity=0.232 Sum_probs=105.4
Q ss_pred CeEEEe-cCCCHHHHHHHHHHHHhcc---cccccCCcccccc------CCCCccceecccc--ChHH--HHHHHHHHhhh
Q 017010 151 PGIYTF-EMLQPRFCEMLLSEVENFE---RWVHDTRFRIMRP------NTMNKFGAVLDDF--GLET--MLDKLMNDFIR 216 (379)
Q Consensus 151 P~Vy~f-pvfsp~fC~~LIeE~E~fg---~ws~~s~~~i~rp------n~mN~ygvvLdd~--Gl~~--~~~~Ll~~yl~ 216 (379)
++++.+ .+|++++|+.|+++++... .+.. + .+.+. ...+..-.-++.- ..+. .+...++..+.
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~-a--~i~~~~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTD-G--QLVSQKSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCS-C--CEEECCSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccc-c--ccccccccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 577777 5999999999999999742 1111 1 11111 1111111112221 1221 23334444433
Q ss_pred hhhhhcCCCccCCCCC-ccceeEEEEeCCCCCCccccccCC-----ceeEEEecCCc----ccccceEEecccccccccc
Q 017010 217 PISKVFFPEVGGSTLD-SHHGFVVEYGMDRDVELGFHVDDS-----EVTLNVCLGRE----FSGGELFFRGVRCDKHVNT 286 (379)
Q Consensus 217 Pl~~~lfp~~~g~~Ld-sh~~FVVrY~~~~d~~L~~H~D~S-----evTlNI~Ln~d----FeGGgl~F~~~~c~~~v~~ 286 (379)
-+... .+...+. ....-+.+|.+ .+.++.+|.|.. .+|+.++||++ +.||+|.|.....
T Consensus 103 ~ln~~----lGl~~i~~~~e~~~~~Y~~-~G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~------ 171 (247)
T 2hbt_A 103 HCNGK----LGSYKINGRTKAMVACYPG-NGTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGK------ 171 (247)
T ss_dssp HTTTT----STTCCEEEECCEEEEEECS-SSCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTC------
T ss_pred HHhhh----cCcccccccceEEEEEecC-CCCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCC------
Confidence 22222 1111111 11233789986 234999999973 59999999985 4599999875321
Q ss_pred cccccceeeccCCCceEEEecCC--CCcCCccCCccceeEEEeecchhhHHHHH
Q 017010 287 ETQSEEILDYSHVPGYAVLHRGR--HRHGARATTSGSRVNLLVWCRSSVFRELK 338 (379)
Q Consensus 287 ~~~~~e~~~y~~~~G~AllH~Gr--h~HeglpVTsG~Ry~LV~W~rss~~R~~~ 338 (379)
+....+.|+.|.+|+|... ..|+++| +.|+||.+.+|++....|+..
T Consensus 172 ----~~~~~v~P~~grlv~F~s~~~~~H~V~p-~~~~R~sit~W~~~~~~~~~a 220 (247)
T 2hbt_A 172 ----AQFADIEPKFDRLLFFWSDRRNPHEVQP-AYATRYAITVWYFDADERARA 220 (247)
T ss_dssp ----SSCEEECCBTTEEEEEECSTTCCEEECC-BSSCEEEEEEEEEEHHHHHHH
T ss_pred ----CceEEEEcCCCEEEEEecCCCceeeecc-CCCEEEEEEEEEcCCchhhhh
Confidence 1234678999999999976 7999999 679999999999999888643
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=97.98 E-value=8.3e-05 Score=78.55 Aligned_cols=199 Identities=15% Similarity=0.133 Sum_probs=122.5
Q ss_pred CCccChhHHHHhhhhcHHHhhhhhcccCCeEEEecCCCHHHHHHHHHHHHhcccccc-cCCcc-ccccCCCCc-cceecc
Q 017010 123 PSVLVPAFVKAVRDNTEASFRSIMAEPIPGIYTFEMLQPRFCEMLLSEVENFERWVH-DTRFR-IMRPNTMNK-FGAVLD 199 (379)
Q Consensus 123 e~~l~p~f~~ai~~~~~~~l~~~~~e~~P~Vy~fpvfsp~fC~~LIeE~E~fg~ws~-~s~~~-i~rpn~mN~-ygvvLd 199 (379)
..++++.|.+.++... .-..|.|-+..-.+|++++-+.+.+|+..--.|.. ..++- +.......+ -+..-+
T Consensus 13 ~~~~~~~~~~~lk~~y------~~s~PFpH~VIdnfl~d~lle~V~~Efp~~i~f~~KetDlYk~~QsgdLanl~~l~~e 86 (633)
T 3kt7_A 13 PKIWDKTFQDGLKKEI------EDSQPYNWGTIHELVNDDLLRAVRKEIETEIHFTKKETDIYRVNQSGDLANLSGLDWD 86 (633)
T ss_dssp GGGGCHHHHHHHHHHH------HTCSSSCCEEESSCBCHHHHHHHHHHHHHHCCCEEEECSSEEEEECCCTTCTTSCCTT
T ss_pred hhhcCHHHHHHHHhhh------hcCCCcceEEECCCCCHHHHHHHHHHhhhccCcccccccccceeccccccccccCChh
Confidence 4688888888877641 23679998888899999999999999973223321 11111 111111111 111222
Q ss_pred ccChHHHHHHHHHHhhhhhhhhcCCCccCC-CCC--ccceeEEEEeCCCCCCccccccCC---ceeEEEecCC-c-----
Q 017010 200 DFGLETMLDKLMNDFIRPISKVFFPEVGGS-TLD--SHHGFVVEYGMDRDVELGFHVDDS---EVTLNVCLGR-E----- 267 (379)
Q Consensus 200 d~Gl~~~~~~Ll~~yl~Pl~~~lfp~~~g~-~Ld--sh~~FVVrY~~~~d~~L~~H~D~S---evTlNI~Ln~-d----- 267 (379)
++..-..|..|++...++-.+.+.-.+.|- .|. ....-+.+|.++. ++..|.|.. .+|+.++||+ +
T Consensus 87 ~l~~lp~l~~Lr~~L~S~~Fr~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G~--fL~~H~D~~~~RrvS~VLYLN~pd~~W~~ 164 (633)
T 3kt7_A 87 DLSRLPNLFKLRQILYSKQYRDFFGYVTKAGKLSGSKTDMSINTYTKGC--HLLTHDDVIGSRRISFILYLPDPDRKWKS 164 (633)
T ss_dssp CCTTCHHHHHHHHHHTSHHHHHHHHHHHTCCCCCSSCCCEEEEEECTTC--EEEEECCCCTTEEEEEEEECSCTTSCCCG
T ss_pred hhccChHHHHHHHHHhcHHHHHHHHHHhCCcccCCCceeEEEEEeCCCC--eeeecCCCCCCeEEEEEEEcCCCCCCCCc
Confidence 333223444444433333333222222221 221 1123367898766 999999964 4999999997 4
Q ss_pred ccccceEEecccccccccccccccceeeccCCCceEEEecC---CCCcCCccCC-ccceeEEEeecchhh
Q 017010 268 FSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRG---RHRHGARATT-SGSRVNLLVWCRSSV 333 (379)
Q Consensus 268 FeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~G---rh~HeglpVT-sG~Ry~LV~W~rss~ 333 (379)
..||+|.+........ ...+....+.|.-|..++|.- ...|++.+|+ ...|+.+.+|+|...
T Consensus 165 e~GGeL~Lyd~d~~~~----P~~d~~~~I~P~fNrLV~F~vsp~~S~H~V~eV~~~~~RlSItGWF~~p~ 230 (633)
T 3kt7_A 165 HYGGGLRLFPSILPNV----PHSDPSAKLVPQFNQIAFFKVLPGFSFHDXEEVKVDKHRLSIQGWYHIPQ 230 (633)
T ss_dssp GGBCCEEECCEEETTE----ECSSCSEEECCCTTEEEEEECCTTTCCEEECCBCSSCCEEEEEEEEECCC
T ss_pred cCCceEEEecCCCcCC----CCCCceEEEecCCCeEEEEEcCCCCCcCCCCccCCCCCEEEEEEEeccCC
Confidence 5699999986432100 001234567899999999984 5999999998 566999999999864
No 6
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=97.57 E-value=0.0011 Score=62.63 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=55.6
Q ss_pred ccccccCC---------ceeEEEecCC-cccccceEEecccccccc-------------------cccccccceeeccCC
Q 017010 249 LGFHVDDS---------EVTLNVCLGR-EFSGGELFFRGVRCDKHV-------------------NTETQSEEILDYSHV 299 (379)
Q Consensus 249 L~~H~D~S---------evTlNI~Ln~-dFeGGgl~F~~~~c~~~v-------------------~~~~~~~e~~~y~~~ 299 (379)
..+|.|.+ .+|+.|+|.+ .=++|.|.|....-...+ .......+......+
T Consensus 142 ~~wHqD~~~~~~~p~~~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 221 (308)
T 2a1x_A 142 HPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVME 221 (308)
T ss_dssp -CCBCGGGGCCEECGGGEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBC
T ss_pred CCCccCCccccCCCCCCeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCCccccccCCeEEccCC
Confidence 68999953 3788999975 456778888642111000 000011244567789
Q ss_pred CceEEEecCCCCcCCccCCc-cceeEEEeecchh
Q 017010 300 PGYAVLHRGRHRHGARATTS-GSRVNLLVWCRSS 332 (379)
Q Consensus 300 ~G~AllH~Grh~HeglpVTs-G~Ry~LV~W~rss 332 (379)
+|.+++|.|+.+|++.+-++ ..|.++++.....
T Consensus 222 aGd~vlf~~~~~H~s~~N~s~~~R~~~~~~y~~~ 255 (308)
T 2a1x_A 222 KGDTVFFHPLLIHGSGQNKTQGFRKAISCHFASA 255 (308)
T ss_dssp TTCEEEECTTCCEEECCBCSSSCEEEEEEEEEET
T ss_pred CccEEEECCCccccCCCCCCCCceEEEEEEEECC
Confidence 99999999999999999765 6688887765554
No 7
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.53 E-value=0.001 Score=61.99 Aligned_cols=87 Identities=18% Similarity=0.169 Sum_probs=59.7
Q ss_pred CCCccccccCC-------ceeEEEecCC-cccccceEEecccccccccc--------------------c-ccccceeec
Q 017010 246 DVELGFHVDDS-------EVTLNVCLGR-EFSGGELFFRGVRCDKHVNT--------------------E-TQSEEILDY 296 (379)
Q Consensus 246 d~~L~~H~D~S-------evTlNI~Ln~-dFeGGgl~F~~~~c~~~v~~--------------------~-~~~~e~~~y 296 (379)
+....+|.|.. .+|+.|+|.+ .=+.|.|.|....-...+.. + ........+
T Consensus 134 g~~~~wHqD~~~~~~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 213 (288)
T 2rdq_A 134 HYLTPFHQDGFYIGPNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLHS 213 (288)
T ss_dssp TTSCCSBCHHHHSCSCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEECC
T ss_pred CCCcCccccccccCCCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceeec
Confidence 45789999953 5789999976 45677788763211000000 0 001123456
Q ss_pred cCCCceEEEecCCCCcCCccCCcc----ceeEEEeecchh
Q 017010 297 SHVPGYAVLHRGRHRHGARATTSG----SRVNLLVWCRSS 332 (379)
Q Consensus 297 ~~~~G~AllH~Grh~HeglpVTsG----~Ry~LV~W~rss 332 (379)
..++|.+++|.++.+|++.+-++. .|+.++.|....
T Consensus 214 ~~~aGdv~lf~~~~~H~s~~N~s~~~R~~R~s~~~~~~~~ 253 (288)
T 2rdq_A 214 PMEPGDILLFHAHMCHKSIPNLSKDPRLMRMSMDTRVQPA 253 (288)
T ss_dssp CCCTTCEEEEETTCCEEEECCCCCTTCCCEEEEEEEEEET
T ss_pred ccCCCCEEEEeCCceecCCCCCCCCccceEEEEEEEEecC
Confidence 789999999999999999998876 379999988776
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=97.51 E-value=0.00068 Score=62.45 Aligned_cols=93 Identities=11% Similarity=0.042 Sum_probs=67.7
Q ss_pred ceeEEEEeCCCCCCcccccc-CCceeEEEecCCcccccceEEeccccccc-----cccccc--ccceeeccCCCceEEEe
Q 017010 235 HGFVVEYGMDRDVELGFHVD-DSEVTLNVCLGREFSGGELFFRGVRCDKH-----VNTETQ--SEEILDYSHVPGYAVLH 306 (379)
Q Consensus 235 ~~FVVrY~~~~d~~L~~H~D-~SevTlNI~Ln~dFeGGgl~F~~~~c~~~-----v~~~~~--~~e~~~y~~~~G~AllH 306 (379)
...++.|.++. ....|.| ++.+|..++|+..=.||++.|...+.... ...+.. ......+.|++|..|||
T Consensus 104 ~~W~~~~~~G~--~~~~H~H~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlF 181 (216)
T 2rg4_A 104 DIWINILPEGG--VHGSHIHPHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLW 181 (216)
T ss_dssp EEEEEEECTTC--CEEEECCTTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEE
T ss_pred eEEEEEcCCCC--cccCccCCCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEE
Confidence 46688998866 8889998 47899999998655799999986532100 000000 02234679999999999
Q ss_pred cCCCCcCCccCCc-cceeEEEeec
Q 017010 307 RGRHRHGARATTS-GSRVNLLVWC 329 (379)
Q Consensus 307 ~Grh~HeglpVTs-G~Ry~LV~W~ 329 (379)
|+...|++.|..+ +.|+.+-.-+
T Consensus 182 pS~l~H~V~p~~~~~~RiSIsFN~ 205 (216)
T 2rg4_A 182 ESWLRHEVPMNMAEEDRISVSFNY 205 (216)
T ss_dssp ETTSCEEECCCCSSSCEEEEEEEE
T ss_pred CCCCEEeccCCCCCCCEEEEEEEe
Confidence 9999999999886 6788765443
No 9
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=97.29 E-value=0.003 Score=58.98 Aligned_cols=89 Identities=18% Similarity=0.147 Sum_probs=58.5
Q ss_pred CCCCCCccccccCC---------ceeEEEecCC-cccccceEEeccccccccc-----c---------------cccccc
Q 017010 243 MDRDVELGFHVDDS---------EVTLNVCLGR-EFSGGELFFRGVRCDKHVN-----T---------------ETQSEE 292 (379)
Q Consensus 243 ~~~d~~L~~H~D~S---------evTlNI~Ln~-dFeGGgl~F~~~~c~~~v~-----~---------------~~~~~e 292 (379)
|+.+....+|.|.+ .+|+.|+|.+ .=++|.|.|....-...+. . .....+
T Consensus 147 Pg~~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (291)
T 2opw_A 147 PHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSL 226 (291)
T ss_dssp TTTBCCEEEECGGGTSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGG
T ss_pred CCCCCCcCCeeCCcccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCC
Confidence 55556689999963 5888889975 4567888886321100000 0 001123
Q ss_pred eeeccCCCceEEEecCCCCcCCccCCcc-ceeEEEeecch
Q 017010 293 ILDYSHVPGYAVLHRGRHRHGARATTSG-SRVNLLVWCRS 331 (379)
Q Consensus 293 ~~~y~~~~G~AllH~Grh~HeglpVTsG-~Ry~LV~W~rs 331 (379)
...+..++|.+++|.|+.+|++.+-++. .|.++++-...
T Consensus 227 ~v~~~~~aGd~~~f~~~~~H~s~~N~s~~~R~~~~~~~~~ 266 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLME 266 (291)
T ss_dssp CEEECBCTTCEEEEETTCEEEECCBCSSSCCCEEEEEEEE
T ss_pred eeecccCCCcEEEEcCCceecCCCCCCCCceEEEEEEEEc
Confidence 5567889999999999999999987764 57777654443
No 10
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.22 E-value=0.0055 Score=57.85 Aligned_cols=44 Identities=11% Similarity=0.111 Sum_probs=33.4
Q ss_pred ceeeccCCCceEEEecCCCCcCCccCC--c-cceeEEEeecchhhHH
Q 017010 292 EILDYSHVPGYAVLHRGRHRHGARATT--S-GSRVNLLVWCRSSVFR 335 (379)
Q Consensus 292 e~~~y~~~~G~AllH~Grh~HeglpVT--s-G~Ry~LV~W~rss~~R 335 (379)
+......++|.+++|.++.+|++.+-+ + ..|.++++-..+...+
T Consensus 218 ~~v~~~~~aGd~v~f~~~l~H~s~~N~~ss~~~R~a~~~~y~~~~~~ 264 (313)
T 2fct_A 218 SAVPMQMKAGQFIIFWSTLMHASYPHSGESQEMRMGFASRYVPSFVH 264 (313)
T ss_dssp GCEEECBCTTEEEEEETTSEEEECCBCSSSSSCEEEEEEEEEETTSE
T ss_pred ceeEeeeCCceEEEEeCCceeeCCCCCCCCCCceEEEEEEEECCCce
Confidence 445667899999999999999999987 4 4587777655554333
No 11
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=96.85 E-value=0.0049 Score=59.48 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=32.0
Q ss_pred ceeeccCCCceEEEecCCCCcCCccCC--ccc-eeEEEeecchhhHH
Q 017010 292 EILDYSHVPGYAVLHRGRHRHGARATT--SGS-RVNLLVWCRSSVFR 335 (379)
Q Consensus 292 e~~~y~~~~G~AllH~Grh~HeglpVT--sG~-Ry~LV~W~rss~~R 335 (379)
+...+..++|.+|+|.|+.+|++.+-+ ++. |.++++-......|
T Consensus 220 ~~v~~~~~aGd~v~f~~~~~H~s~~N~~ts~~~R~a~~~~y~~~~~~ 266 (319)
T 3gja_A 220 QAYPMVLKPGEAVIFWSNTMHASLPHTGSKTDYRMGFAARYVPTQVQ 266 (319)
T ss_dssp -CCBCCBCTTEEEEEETTSCEEECCCCSCTTCCEEEEEEEEEETTSE
T ss_pred ceeEeeECCCeEEEEcCCccccCCCCCCCCCCcEEEEEEEEECCCce
Confidence 345567899999999999999999887 554 77776544443333
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=96.59 E-value=0.0073 Score=58.07 Aligned_cols=175 Identities=15% Similarity=0.216 Sum_probs=88.7
Q ss_pred eEEEe-cCCCHHHHHHHHHHHHhcccccc--cCCccccccCCCCccceeccccChHHHHHHHH-HHhhhhhhhhcCCCcc
Q 017010 152 GIYTF-EMLQPRFCEMLLSEVENFERWVH--DTRFRIMRPNTMNKFGAVLDDFGLETMLDKLM-NDFIRPISKVFFPEVG 227 (379)
Q Consensus 152 ~Vy~f-pvfsp~fC~~LIeE~E~fg~ws~--~s~~~i~rpn~mN~ygvvLdd~Gl~~~~~~Ll-~~yl~Pl~~~lfp~~~ 227 (379)
|...+ .+|+++.|+.|.++++....... +....+..+.+ ....-+++-......+..++ ...|..+++.|+
T Consensus 47 Gyvvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~f~~l~~~p~l~~i~~~ll---- 121 (310)
T 3emr_A 47 GFLQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES-NDIRSIFHVHQDDNYFQDVANDKRILDIVRHLL---- 121 (310)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT-CCEEEEECHHHHCHHHHHHHTCHHHHHHHHHHH----
T ss_pred CEEEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC-cceeEEeehhhccHHHHHHHhChHHHHHHHHHc----
Confidence 66666 49999999999999997643211 11111111111 01011111001112222222 223333344443
Q ss_pred CCCCCccceeEEEEeC-CCCCCccccccCC------------ceeEEEecCC-cccccceEEecccccccc----ccc-c
Q 017010 228 GSTLDSHHGFVVEYGM-DRDVELGFHVDDS------------EVTLNVCLGR-EFSGGELFFRGVRCDKHV----NTE-T 288 (379)
Q Consensus 228 g~~Ldsh~~FVVrY~~-~~d~~L~~H~D~S------------evTlNI~Ln~-dFeGGgl~F~~~~c~~~v----~~~-~ 288 (379)
|..+.-+.. .+-+.+ +.+....+|.|.+ .+|+.|+|.+ .=+.|.|.|....-...+ +.. .
T Consensus 122 G~~~~l~~s-~~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viPGSH~~~~~~~g~~p~~ 200 (310)
T 3emr_A 122 GSDVYVHQS-RINYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIPGSHNYFVSCVGETPDN 200 (310)
T ss_dssp TSCEEEEEE-EEECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECTTGGGEEEECCC-----
T ss_pred CCceEEEee-EEEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEeCCCCCccccccccccc
Confidence 111111111 122343 3456789999942 4888999975 346777877532111000 000 0
Q ss_pred ------------cc-----------cc-eeeccCCCceEEEecCCCCcCCccCCcc-ceeEEEeecchh
Q 017010 289 ------------QS-----------EE-ILDYSHVPGYAVLHRGRHRHGARATTSG-SRVNLLVWCRSS 332 (379)
Q Consensus 289 ------------~~-----------~e-~~~y~~~~G~AllH~Grh~HeglpVTsG-~Ry~LV~W~rss 332 (379)
.+ .. +.....++|.+++|.|+.+|++.+-++. .|.++++-..+.
T Consensus 201 ~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~~~~H~s~~N~S~~~R~~l~~~y~~~ 269 (310)
T 3emr_A 201 NYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFESNTMHGSTSNITPYPRNNLFMVYNSV 269 (310)
T ss_dssp ------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEETTCCEEECCCCSSCCCCEEEEEEEEG
T ss_pred ccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeCCceecCCCCCCCCCeEEEEEEEeCC
Confidence 00 01 4556779999999999999999887654 477665544443
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=94.85 E-value=0.053 Score=53.31 Aligned_cols=177 Identities=11% Similarity=0.089 Sum_probs=91.9
Q ss_pred eEEEe-cCCCHHHHHHHHHHHHhcccccccCCc--cccccCCCCccce--eccccChHHHHHHHHHHhhhhhhhhcCCCc
Q 017010 152 GIYTF-EMLQPRFCEMLLSEVENFERWVHDTRF--RIMRPNTMNKFGA--VLDDFGLETMLDKLMNDFIRPISKVFFPEV 226 (379)
Q Consensus 152 ~Vy~f-pvfsp~fC~~LIeE~E~fg~ws~~s~~--~i~rpn~mN~ygv--vLdd~Gl~~~~~~Ll~~yl~Pl~~~lfp~~ 226 (379)
|-.++ .||++++-+.+.++++...+-...++. .|+-|....-.-+ -.|+++... ...| ..++...+-+ +
T Consensus 41 GYLvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~~~f~~h~-~s~l----~~rll~vl~~-L 114 (344)
T 3nnf_A 41 GYCQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAYDLVKYDF-VSSF----IQEKLALLNY-I 114 (344)
T ss_dssp SEEEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEECSSCHHH-HHHH----HGGGHHHHHH-H
T ss_pred ceEEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccchhHHHHH-HHHH----HHHHHHHHHH-H
Confidence 55556 599999999999999987542211111 1111111000001 023344421 1111 1222222221 2
Q ss_pred cCCCCCccceeEEEEeCCCCCCcccccc----------CCceeEEEecCC--cccccceEEec---------ccc-----
Q 017010 227 GGSTLDSHHGFVVEYGMDRDVELGFHVD----------DSEVTLNVCLGR--EFSGGELFFRG---------VRC----- 280 (379)
Q Consensus 227 ~g~~Ldsh~~FVVrY~~~~d~~L~~H~D----------~SevTlNI~Ln~--dFeGGgl~F~~---------~~c----- 280 (379)
.|..+-.+..-.+.+.|+ ...|.||.| +..+|+-|.|.+ .-++|++.+-. +.-
T Consensus 115 lG~el~i~qs~~fe~kPG-~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i~~e~nGGM~~VP~s~~Sgs~~y~~~d~~~ 193 (344)
T 3nnf_A 115 TGKNLMIMHNALFSVEPN-HKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITKEHRGGMQYVSTKIFPGQFYYSVFDLHL 193 (344)
T ss_dssp HTSCEEEEEEEEEEECBT-CCBSCSBCTTTTTTTBCTTSCEEEEEEESSCBCTTTBCSEEEECTTTCCTHHHHHHHHHHH
T ss_pred hCCceeeeecceEeeCCC-CCCCCceecccccccccCCCCeEEEEEECCCCCccCCCceEEecCcccCcceeeecchHHH
Confidence 233333333334677887 789999999 456899999953 23455555543 110
Q ss_pred cccccccccc---cc------------------------eeeccCCCceEEEecCCCCcCCccCCcc---ceeEEEeecc
Q 017010 281 DKHVNTETQS---EE------------------------ILDYSHVPGYAVLHRGRHRHGARATTSG---SRVNLLVWCR 330 (379)
Q Consensus 281 ~~~v~~~~~~---~e------------------------~~~y~~~~G~AllH~Grh~HeglpVTsG---~Ry~LV~W~r 330 (379)
...+...+.. ++ .......||.||+|.+..+|++.|...+ .|-++++-.-
T Consensus 194 ~~~Lk~qe~~~sLee~la~~~gi~~~~~~~~i~~~le~~~~ewd~epGDav~F~~~tlHga~plgn~~~~rRRAfS~Rfv 273 (344)
T 3nnf_A 194 KNNIKWDESQGDLNEYVANANTIYNKITEDVIDYTIKDGYEEDEYNLGDAFFFNKYVLHQSVPLKPGLHKLRRAFVIRLV 273 (344)
T ss_dssp HHHTTCCGGGCCHHHHHHHCCCHHHHCCHHHHHHHHTTCEEECCBCTTCEEEEETTCEEEECCBCTTSCSCEEEEEEEEE
T ss_pred HHHhhccCCcccHHHHHHhhcCcccCccccccchhhhhhhccccCCCCcEEEEecceeecCCCCCCCCccceeEEEEEEe
Confidence 0000000000 01 1233458999999999999999977664 4666665444
Q ss_pred hhhHH
Q 017010 331 SSVFR 335 (379)
Q Consensus 331 ss~~R 335 (379)
.+..|
T Consensus 274 GDDar 278 (344)
T 3nnf_A 274 DYDTR 278 (344)
T ss_dssp ETTCB
T ss_pred cCcce
Confidence 33333
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=94.18 E-value=0.44 Score=43.29 Aligned_cols=158 Identities=15% Similarity=0.192 Sum_probs=87.0
Q ss_pred eEEEecCCCHHHHHHHHHHHHhcccccccC--Ccc-----ccccCCCCccc----------eeccccChHHHHHHHHHHh
Q 017010 152 GIYTFEMLQPRFCEMLLSEVENFERWVHDT--RFR-----IMRPNTMNKFG----------AVLDDFGLETMLDKLMNDF 214 (379)
Q Consensus 152 ~Vy~fpvfsp~fC~~LIeE~E~fg~ws~~s--~~~-----i~rpn~mN~yg----------vvLdd~Gl~~~~~~Ll~~y 214 (379)
.+|...+|+++.++.|++++.+--.|..+. .+. +.-|....=|| ..+...++..++..+++.
T Consensus 12 ~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~gk~~~~pR~~~wyg~~~~~Y~Ysg~~~~~~pwp~~L~~l~~~- 90 (204)
T 3s57_A 12 DSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFGKWHSVPRKQATYGDAGLTYTFSGLTLSPKPWIPVLERIRDH- 90 (204)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETTEEEECSSEEEEEECTTCCEEETTEEECCEECCHHHHHHHHH-
T ss_pred eEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECCeEeccCcEEEEECCCCCCcccCCCcccCCCCCHHHHHHHHH-
Confidence 466667999999999999998766773211 111 01122111122 122223444455555442
Q ss_pred hhhhhhhcCCCccCCCCCccceeEEEEeCCCCCCccccccCC------ceeEEEecCCcccccceEEecccccccc-ccc
Q 017010 215 IRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDS------EVTLNVCLGREFSGGELFFRGVRCDKHV-NTE 287 (379)
Q Consensus 215 l~Pl~~~lfp~~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S------evTlNI~Ln~dFeGGgl~F~~~~c~~~v-~~~ 287 (379)
+ .+ ++ +..+| ...+-.|.++. ..+++|.|+. ..-++|+|| +...|.= +|...- ...
T Consensus 91 ~---~~-~~----g~~~n--~~LvN~Y~~G~-d~i~~H~D~~~~~~~~~~IasvSLG-----~~~~f~~-~~~~~~~~~~ 153 (204)
T 3s57_A 91 V---SG-VT----GQTFN--FVLINRYKDGS-DHICEHRDDERELAPGSPIASVSFG-----ASRDFVF-RHKDSRGKSP 153 (204)
T ss_dssp H---HH-HH----CCCCS--EEEEEEESSTT-CCEEEECCCCTTBCTTCCEEEEEEE-----SCEEEEE-EEGGGCSSSC
T ss_pred H---HH-Hh----CCCCc--eeEEEEECCCC-CcccceecChhhccCCCcEEEEECC-----CceEEEE-EEcCCCcccc
Confidence 2 11 11 22334 45677898754 3799999983 244566663 3344431 121100 000
Q ss_pred ccccceeeccCCCceEEEecCC----CCcCCccCC--ccceeEEEe
Q 017010 288 TQSEEILDYSHVPGYAVLHRGR----HRHGARATT--SGSRVNLLV 327 (379)
Q Consensus 288 ~~~~e~~~y~~~~G~AllH~Gr----h~HeglpVT--sG~Ry~LV~ 327 (379)
........+....|..++-.|. +.|+..++. .|.|.||..
T Consensus 154 ~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 154 SRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp SCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCTTCCSCEEEEEE
T ss_pred ccCCceEEEECCCCCEEEECchhhheeEeeccccCCCCCCEEEEEe
Confidence 1112345678899999999998 568776665 388999874
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=94.01 E-value=0.16 Score=50.09 Aligned_cols=143 Identities=19% Similarity=0.330 Sum_probs=73.3
Q ss_pred cccCCeEEEec-CCCHHHHHHHHHHHHhcccccccCC-c---cccccCCCCccceecc------c------cChHHHHHH
Q 017010 147 AEPIPGIYTFE-MLQPRFCEMLLSEVENFERWVHDTR-F---RIMRPNTMNKFGAVLD------D------FGLETMLDK 209 (379)
Q Consensus 147 ~e~~P~Vy~fp-vfsp~fC~~LIeE~E~fg~ws~~s~-~---~i~rpn~mN~ygvvLd------d------~Gl~~~~~~ 209 (379)
....|||+.+| ++++++.+.|++++. |..... + ....+.....||..++ + .++-.++..
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~----w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~ 182 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVD----WTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICES 182 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC--------------------CEEECCC------------------CCCHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcc----cCCccccccCcccccCceEEEECCcccccccccccCCCCCcCcCHHHHH
Confidence 34467899986 999999999998776 433111 0 0112333344553211 1 123333444
Q ss_pred HHHHhhhhhhhhcCCCccCCCCCccceeEEEEeCCCCCCccccccCCc----eeEEEecCCcccccceEEeccccccccc
Q 017010 210 LMNDFIRPISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDSE----VTLNVCLGREFSGGELFFRGVRCDKHVN 285 (379)
Q Consensus 210 Ll~~yl~Pl~~~lfp~~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~Se----vTlNI~Ln~dFeGGgl~F~~~~c~~~v~ 285 (379)
+++.... . ++.+..+| ...|-.|.++. .+++|.|+.. .-++|+|+. ...|.= ++..
T Consensus 183 l~~r~~~---~----~~~~~~~n--~~lvN~Y~~G~--~I~~H~D~~~~~~~~I~slSLG~-----~~~f~f-~~~~--- 242 (345)
T 3tht_A 183 FLEKWLR---K----GYIKHKPD--QMTINQYEPGQ--GIPAHIDTHSAFEDEIVSLSLGS-----EIVMDF-KHPD--- 242 (345)
T ss_dssp HHHHHHH---H----TSCSSCCS--EEEEEEECTTC--CEEEECCCTTTBCSCEEEEEESS-----CEEEEE-ECTT---
T ss_pred HHHHHHh---c----ccCCCCCC--EEEEEEecCCC--CEeeccCCchhcCCeEEEEECCC-----ceeEEE-ccCC---
Confidence 4443221 1 12223333 45688899875 9999999852 344555542 233321 1110
Q ss_pred ccccccceeeccCCCceEEEecCC----CCcCCccCC
Q 017010 286 TETQSEEILDYSHVPGYAVLHRGR----HRHGARATT 318 (379)
Q Consensus 286 ~~~~~~e~~~y~~~~G~AllH~Gr----h~HeglpVT 318 (379)
.....+....|..++-.|. +.|+..++.
T Consensus 243 -----~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~ 274 (345)
T 3tht_A 243 -----GIAVPVMLPRRSLLVMTGESRYLWTHGITCRK 274 (345)
T ss_dssp -----SCEEEEEECTTEEEEECTHHHHTSEEEECCCS
T ss_pred -----CceEEEEcCCCcEEEEChHHhhceEccCCccc
Confidence 1234567788999998886 446655443
No 16
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=93.42 E-value=0.32 Score=45.15 Aligned_cols=160 Identities=16% Similarity=0.234 Sum_probs=87.6
Q ss_pred CeEEEec-CCCHHHHHHHHHHHHhcccccccCCc----cccccCCCCccce--------ecccc-ChHHHHHHHHHHhhh
Q 017010 151 PGIYTFE-MLQPRFCEMLLSEVENFERWVHDTRF----RIMRPNTMNKFGA--------VLDDF-GLETMLDKLMNDFIR 216 (379)
Q Consensus 151 P~Vy~fp-vfsp~fC~~LIeE~E~fg~ws~~s~~----~i~rpn~mN~ygv--------vLdd~-Gl~~~~~~Ll~~yl~ 216 (379)
|+|+.+| +++++..+.|++++.+--.|...... ...-|....-||- ..... ++-..+..+++. +
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~~~~~~R~~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~~-~- 117 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELPYTYSRITMEPNPHWHPVLRTLKNR-I- 117 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCCTTSCHHHHCCBSSCCHHHHHHHHH-H-
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCcccccCCeeEEcCCCccccCCcccCCCCCCCHHHHHHHHH-H-
Confidence 5788886 99999999999999754456432210 0001222222331 01111 333333333321 1
Q ss_pred hhhhhcCCCccCCCCCccceeEEEEeCCCCCCccccccCC------ceeEEEecCCcccccceEEeccccccccc--ccc
Q 017010 217 PISKVFFPEVGGSTLDSHHGFVVEYGMDRDVELGFHVDDS------EVTLNVCLGREFSGGELFFRGVRCDKHVN--TET 288 (379)
Q Consensus 217 Pl~~~lfp~~~g~~Ldsh~~FVVrY~~~~d~~L~~H~D~S------evTlNI~Ln~dFeGGgl~F~~~~c~~~v~--~~~ 288 (379)
. .++ +..+| ...|-.|.++ +..+++|.|+. ..-++|+| |+.+.|.= +|...-. .+.
T Consensus 118 --~-~~~----g~~~n--~~LvN~Y~~G-~d~i~~H~D~~~~~~~~~~IaslSL-----G~~~~f~f-~~~~~~~~~~~~ 181 (238)
T 2iuw_A 118 --E-ENT----GHTFN--SLLCNLYRNE-KDSVDWHSDDEPSLGRCPIIASLSF-----GATRTFEM-RKKPPPEENGDY 181 (238)
T ss_dssp --H-HHH----SCCCC--EEEEEEECST-TCCEEEECCCCGGGCSSCCEEEEEE-----ESCEEEEE-EECCC-------
T ss_pred --H-HHh----CCCCC--EEEEEEECCC-CCceeCCcCChhhcCCCCcEEEEEC-----CCCEEEEE-eccCCccccCcc
Confidence 1 111 22333 4556778765 34899999974 24456666 34444431 1111000 000
Q ss_pred cccceeeccCCCceEEEecCC----CCcCCccCC--ccceeEEEee
Q 017010 289 QSEEILDYSHVPGYAVLHRGR----HRHGARATT--SGSRVNLLVW 328 (379)
Q Consensus 289 ~~~e~~~y~~~~G~AllH~Gr----h~HeglpVT--sG~Ry~LV~W 328 (379)
.......+....|..++-.|. ..|+..++. .|.|.||..-
T Consensus 182 ~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~~~~~~RIsLTfR 227 (238)
T 2iuw_A 182 TYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFR 227 (238)
T ss_dssp -CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEE
T ss_pred cCCceEEEEcCCCCEEEEChhhhCccEecCCCcCCCCCCEEEEEee
Confidence 012456678999999999998 569988874 8999999753
No 17
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=87.95 E-value=0.43 Score=45.28 Aligned_cols=77 Identities=21% Similarity=0.240 Sum_probs=58.3
Q ss_pred CccccccCCceeEEEecC-CcccccceEEecccccccccccccccceeecc-CCCceEEEecCC-CCcCCccCCc-----
Q 017010 248 ELGFHVDDSEVTLNVCLG-REFSGGELFFRGVRCDKHVNTETQSEEILDYS-HVPGYAVLHRGR-HRHGARATTS----- 319 (379)
Q Consensus 248 ~L~~H~D~SevTlNI~Ln-~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~-~~~G~AllH~Gr-h~HeglpVTs----- 319 (379)
-=+.|.|..++++.+.++ ..-+||++........ ...... ..+|.+++.--+ .+|++.||.+
T Consensus 162 PEGiHrDG~d~v~v~lv~R~Ni~GGet~I~~~~~~----------~~~~~~l~~p~d~llv~D~~~~H~vTpI~~~~~~~ 231 (254)
T 3pl0_A 162 PEGAHRDGVDFVAVVFIGRQGVRGGETRVFDAAGP----------QGVRFTLEQPWTVLLLDDQQVIHESTPLLPLDPAD 231 (254)
T ss_dssp TTCSBCCSSSEEEEEEEEEESEEECCEEEEETTSS----------EEEEECCCSTTCEEEEETTTEEEEECCEEESCTTC
T ss_pred CcccccCCCCEEEEEEecCCccccceEEEEcCCCC----------ccceeEecCCCcEEEEeCCcccCCCCccccCCCCC
Confidence 356999999999999997 4688999998875321 112222 478888888755 8999999874
Q ss_pred ----cceeEEEeecchhhH
Q 017010 320 ----GSRVNLLVWCRSSVF 334 (379)
Q Consensus 320 ----G~Ry~LV~W~rss~~ 334 (379)
|.|-+||+-++.-.|
T Consensus 232 ~~~~g~RDvlVvtf~~~~~ 250 (254)
T 3pl0_A 232 PAVPAHRDTLVLTYRSGGF 250 (254)
T ss_dssp TTSCCEEEEEEEEEESSSC
T ss_pred CCCceEEEEEEEEecCCcc
Confidence 889999998876443
No 18
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=87.44 E-value=1.2 Score=40.79 Aligned_cols=80 Identities=23% Similarity=0.288 Sum_probs=52.8
Q ss_pred ceeEEEEeCCCCCCccccccCCc-----eeEEEecCCcccccceEEecccccccccccccccceeeccCCCceEEEecCC
Q 017010 235 HGFVVEYGMDRDVELGFHVDDSE-----VTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR 309 (379)
Q Consensus 235 ~~FVVrY~~~~d~~L~~H~D~Se-----vTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Gr 309 (379)
...|-.|.++. .+++|.|..+ .-++|+| |+.+.|.= +|.. ..+....+....|..++-.|.
T Consensus 106 ~~LvN~Y~~G~--~i~~H~D~~e~~~~~pI~svSL-----G~~~~f~f-~~~~------~~~~~~~i~L~~GsllvM~G~ 171 (211)
T 3i3q_A 106 ACLINRYAPGA--KLSLHQDKDEPDLRAPIVSVSL-----GLPAIFQF-GGLK------RNDPLKRLLLEHGDVVVWGGE 171 (211)
T ss_dssp EEEEEEECTTC--CEEEECCCCCSCTTSCEEEEEE-----ESCEEEEE-CCSS------TTSCCEEEEECTTCEEEECGG
T ss_pred EEEEEEEcCCC--CcccccCCCccccCCCEEEEEC-----CCCeEEEE-eccc------CCCceEEEECCCCCEEEECch
Confidence 45677898876 9999999422 2345555 33444431 1210 112345678899999999887
Q ss_pred ---CCcCCccCCc-------cceeEEEee
Q 017010 310 ---HRHGARATTS-------GSRVNLLVW 328 (379)
Q Consensus 310 ---h~HeglpVTs-------G~Ry~LV~W 328 (379)
+.|+..++.. |.|.||..-
T Consensus 172 ~r~~~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 172 SRLFYHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp GTTCCEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred HHceEeccCcccCCcCCCCCCCEEEEEee
Confidence 7899888886 469998753
No 19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=83.00 E-value=2.6 Score=41.13 Aligned_cols=79 Identities=19% Similarity=0.195 Sum_probs=60.0
Q ss_pred EEEEeCC----CCCCccccccCCceeEEEecCCcccccceEEecccccccccccccccceeeccCCCceEEEecCC----
Q 017010 238 VVEYGMD----RDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR---- 309 (379)
Q Consensus 238 VVrY~~~----~d~~L~~H~D~SevTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Gr---- 309 (379)
+.+|-+- ....+++|+|-+.+||... ++ -|||.... ..+++.+.+.+|..||.-|.
T Consensus 214 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 277 (356)
T 1gp6_A 214 INYYPKCPQPELALGVEAHTDVSALTFILH--NM--VPGLQLFY------------EGKWVTAKCVPDSIVMHIGDTLEI 277 (356)
T ss_dssp EEEECCCSSTTTCCSEEEECCCSSEEEEEE--CS--CCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred eeecCCCCCcccccCcCCccCCCeEEEEEE--cC--CCCeEEec------------CCcEEECcCCCCeEEEEeccHHHH
Confidence 5778653 3446889999999999875 22 36677652 13577889999999999884
Q ss_pred --------CCcCCccCCccceeEEEeecchh
Q 017010 310 --------HRHGARATTSGSRVNLLVWCRSS 332 (379)
Q Consensus 310 --------h~HeglpVTsG~Ry~LV~W~rss 332 (379)
..|.+..-....||.+..|+.-.
T Consensus 278 ~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~ 308 (356)
T 1gp6_A 278 LSNGKYKSILHRGLVNKEKVRISWAVFCEPP 308 (356)
T ss_dssp HTTTSSCCCCEEECCCSSCCEEEEEEEEECC
T ss_pred hcCCEeeccCceecCCCCCCEEEEEEeecCC
Confidence 57888766667899999999875
No 20
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=82.36 E-value=2.8 Score=40.28 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=59.6
Q ss_pred EEEEeCCC----CCCccccccCCceeEEEecCCcccccceEEecccccccccccccccceeeccCCCceEEEecCC----
Q 017010 238 VVEYGMDR----DVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR---- 309 (379)
Q Consensus 238 VVrY~~~~----d~~L~~H~D~SevTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Gr---- 309 (379)
+.+|-+-. ...+++|+|-+.+||... ++ +-|||.... ..+++.+.+.+|..||.-|.
T Consensus 159 l~~YPp~~~~~~~~g~~~HtD~g~lTlL~q--d~-~v~GLQV~~------------~g~Wi~V~p~pgalvVNiGD~l~~ 223 (319)
T 1w9y_A 159 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQ--DD-KVSGLQLLK------------DGQWIDVPPMRHSIVVNLGDQLEV 223 (319)
T ss_dssp EEECCCCSCGGGGSSCCCBCCSSSEEEEEE--SS-SCCCEEEEE------------TTEEEECCCCTTCEEEEECHHHHH
T ss_pred EEecCCCcccccccccccccCCCceEEEEe--cC-CCCeeeEee------------CCeEEEcccCCCcEEEEhHHHHHH
Confidence 56776532 346899999999999875 21 236677642 13577889999999999875
Q ss_pred --------CCcCCccCCccceeEEEeecchh
Q 017010 310 --------HRHGARATTSGSRVNLLVWCRSS 332 (379)
Q Consensus 310 --------h~HeglpVTsG~Ry~LV~W~rss 332 (379)
..|.+..-..+.||.+..|+.-+
T Consensus 224 ~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~ 254 (319)
T 1w9y_A 224 ITNGKYKSVMHRVIAQKDGARMSLASFYNPG 254 (319)
T ss_dssp HTTTSSCCCCEEECCCSSSCCEEEEEEEECC
T ss_pred HhCCeeecccceecCCCCCCceEEEEEecCC
Confidence 57888776678899999999754
No 21
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=81.38 E-value=2.3 Score=40.11 Aligned_cols=80 Identities=16% Similarity=0.192 Sum_probs=57.8
Q ss_pred EEEEeCCC------CCCccccccCCceeEEEecCCcccccceEEecccccccccccccccceeeccCCCceEEEecCC--
Q 017010 238 VVEYGMDR------DVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR-- 309 (379)
Q Consensus 238 VVrY~~~~------d~~L~~H~D~SevTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Gr-- 309 (379)
+.+|-+-. ...+++|+|-+.+||... + +-|||..... ..++..+.+.+|..||.-|.
T Consensus 154 ~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q--d--~~~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l 218 (280)
T 3on7_A 154 ILHYPPMTGDEEMGAIRAAAHEDINLITVLPT--A--NEPGLQVKAK-----------DGSWLDVPSDFGNIIINIGDML 218 (280)
T ss_dssp EEEECCCCTTCCCCSEEEEEECCCSSEEEEEC--C--SCCCEEEECT-----------TSCEEECCCCTTCEEEEECHHH
T ss_pred EEECCCCCCccccCcccccCCCCCCeEEEEEe--c--CCCCeEEEcC-----------CCCEEECcCCCCEEEEEcChHH
Confidence 57787532 234789999999999864 2 2367876532 13577889999999999986
Q ss_pred ----------CCcCCccCC----ccceeEEEeecchh
Q 017010 310 ----------HRHGARATT----SGSRVNLLVWCRSS 332 (379)
Q Consensus 310 ----------h~HeglpVT----sG~Ry~LV~W~rss 332 (379)
..|.+..-. ...||.+..|+.-.
T Consensus 219 ~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~ 255 (280)
T 3on7_A 219 QEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPH 255 (280)
T ss_dssp HHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCC
T ss_pred HHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCC
Confidence 468765432 45799999999865
No 22
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=78.52 E-value=3.4 Score=39.48 Aligned_cols=81 Identities=21% Similarity=0.153 Sum_probs=56.8
Q ss_pred EEEEeCCC--------CCCccccccCCceeEEEecCCcccccc--eEEecccccccccccccccceeeccCCCceEEEec
Q 017010 238 VVEYGMDR--------DVELGFHVDDSEVTLNVCLGREFSGGE--LFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHR 307 (379)
Q Consensus 238 VVrY~~~~--------d~~L~~H~D~SevTlNI~Ln~dFeGGg--l~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~ 307 (379)
+.+|-+-. +..+++|+|-+.+||...=+ + .||+ |.... . .++..+.+.+|..||.-
T Consensus 161 l~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~-~-v~G~~~LqV~~-~-----------g~W~~V~p~pg~lvVNi 226 (311)
T 1dcs_A 161 FRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTP-C-ANGFVSLQAEV-G-----------GAFTDLPYRPDAVLVFC 226 (311)
T ss_dssp EEEECC-----------CCEEEEEECSSEEEEEEEC-C-TTCCCCEEEEE-T-----------TEEEECCCCTTCEEEEE
T ss_pred eecCCCCCcccccCccccccccccCCCeEEEEecCC-C-CCCceeEEEEe-C-----------CEEEeCcCCCCeEEEEH
Confidence 56776522 33489999999999987621 2 2332 76654 1 35678899999999998
Q ss_pred CC------------CCcCCccCC-----ccceeEEEeecchh
Q 017010 308 GR------------HRHGARATT-----SGSRVNLLVWCRSS 332 (379)
Q Consensus 308 Gr------------h~HeglpVT-----sG~Ry~LV~W~rss 332 (379)
|. ..|.+..-. ...||.+..|+.-+
T Consensus 227 GD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~ 268 (311)
T 1dcs_A 227 GAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPN 268 (311)
T ss_dssp CHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCC
T ss_pred HHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCC
Confidence 75 578887655 55799999999865
No 23
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=78.19 E-value=3.2 Score=39.53 Aligned_cols=80 Identities=21% Similarity=0.210 Sum_probs=56.7
Q ss_pred EEEEeCC----CCCCccccccCCceeEEEecCCcccccceEEecccccccccccccccceeeccCCCceEEEecCC----
Q 017010 238 VVEYGMD----RDVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR---- 309 (379)
Q Consensus 238 VVrY~~~----~d~~L~~H~D~SevTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Gr---- 309 (379)
+.+|-+- .+..+++|+|-+.+||... ++ -|||..... ..++..+.+.+|..||.-|.
T Consensus 173 ~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q--d~--v~GLqV~~~-----------~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 173 LLHYPPIPKDATGVRAGAHGDINTITLLLG--AE--EGGLEVLDR-----------DGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp EEEECCCSSCCC--CEEEECCCSSEEEEEC--CT--TSCEEEECT-----------TSCEEECCCCSSCEEEEECHHHHH
T ss_pred eEecCCCCCCcCCcCccceecCceEEEEeE--cC--cCceEEECC-----------CCcEEECCCCCCeEEEEhHHHHHH
Confidence 5678762 2356789999999999864 32 467776532 13577889999999999885
Q ss_pred --------CCcCCccCC----ccceeEEEeecchh
Q 017010 310 --------HRHGARATT----SGSRVNLLVWCRSS 332 (379)
Q Consensus 310 --------h~HeglpVT----sG~Ry~LV~W~rss 332 (379)
..|.+.... ...||.+..|+.-.
T Consensus 238 ~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~ 272 (312)
T 3oox_A 238 LTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFA 272 (312)
T ss_dssp HTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCC
T ss_pred HhCCeecCCCceEeCCCccCCCCCEEEEEEEecCC
Confidence 468875432 34599999999865
No 24
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=78.07 E-value=3.2 Score=39.94 Aligned_cols=70 Identities=14% Similarity=0.110 Sum_probs=53.3
Q ss_pred CCCccccccCCceeEEEecCCcccccceEEecccccccccccccccceeeccCCCceEEEecCC------------CCcC
Q 017010 246 DVELGFHVDDSEVTLNVCLGREFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGR------------HRHG 313 (379)
Q Consensus 246 d~~L~~H~D~SevTlNI~Ln~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Gr------------h~He 313 (379)
...+++|+|-+.+||... ++ -|||..... .. +..+.+.+|..||.-|. ..|.
T Consensus 208 ~~g~~~HtD~g~lTlL~q--d~--v~GLQV~~~-----------~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HR 271 (331)
T 1odm_A 208 KLSFEWHEDVSLITVLYQ--SN--VQNLQVETA-----------AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHR 271 (331)
T ss_dssp EEEEEEECCSSSEEEEEE--CS--SCCEEEEET-----------TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEE
T ss_pred ccccccccCCCeEEEEee--CC--CCCEEEEcC-----------CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCce
Confidence 346899999999999876 22 477876531 13 67789999999999875 5788
Q ss_pred CccCCccceeEEEeecchh
Q 017010 314 ARATTSGSRVNLLVWCRSS 332 (379)
Q Consensus 314 glpVTsG~Ry~LV~W~rss 332 (379)
+.. ....||.+..|+.-.
T Consensus 272 Vv~-~~~~R~Sia~F~~P~ 289 (331)
T 1odm_A 272 VKW-VNAERQSLPFFVNLG 289 (331)
T ss_dssp EEC-CCSCEEEEEEEECCC
T ss_pred eCC-CCCCEEEEEEEEcCC
Confidence 863 356799999999865
No 25
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=71.98 E-value=1.4 Score=35.58 Aligned_cols=50 Identities=22% Similarity=0.387 Sum_probs=28.3
Q ss_pred CCCCcCCccCCccceeEEEeecch-hhHHHHHhhh-----hhccccchhhhhhhhH
Q 017010 308 GRHRHGARATTSGSRVNLLVWCRS-SVFRELKKYQ-----KECSSWCAECQREKKE 357 (379)
Q Consensus 308 Grh~HeglpVTsG~Ry~LV~W~rs-s~~R~~~~y~-----~~f~~~c~~c~~~~~~ 357 (379)
|-|.|++.++-.-.+..||.=+.+ ..|.+.-+-. -=++.||+-|......
T Consensus 3 ~~~~~~~~~~~~~~~~~mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~ 58 (125)
T 1r26_A 3 GWHHHHHHGIRMRARYPSVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERP 58 (125)
T ss_dssp ---------CCCSSCCSCCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHH
T ss_pred ccccccccceeeeccccceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHH
Confidence 347888888888888888877777 7776544211 1257899999765543
No 26
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=70.85 E-value=5.1 Score=36.53 Aligned_cols=75 Identities=13% Similarity=0.054 Sum_probs=52.9
Q ss_pred eeEEEEeCCCCCCccccccCCceeEEEecC---CcccccceEEecccccccccccccccceeeccCCCceEEEecCCCCc
Q 017010 236 GFVVEYGMDRDVELGFHVDDSEVTLNVCLG---REFSGGELFFRGVRCDKHVNTETQSEEILDYSHVPGYAVLHRGRHRH 312 (379)
Q Consensus 236 ~FVVrY~~~~d~~L~~H~D~SevTlNI~Ln---~dFeGGgl~F~~~~c~~~v~~~~~~~e~~~y~~~~G~AllH~Grh~H 312 (379)
+++.+-.|+. .+.+|+|-+-..+.+-|+ .+ ++|+|.=.+ -.+.-+.|.+++|-....|
T Consensus 104 a~fs~L~pG~--~I~pH~g~~n~~lR~HL~L~~p~---~~~~i~V~~--------------~~~~w~eGe~~~fDds~~H 164 (197)
T 3rcq_A 104 IKYSIMHPGT--HVWPHTGPTNCRLRMHLGLVIPK---EGCKIRCAN--------------ETKTWEEGKVLIFDDSFEH 164 (197)
T ss_dssp EEEEEECTTE--EEEEECCSCTTEEEEEEEEECCS---SSEEEEETT--------------EEECCCBTCEEEECTTSCE
T ss_pred EEEEEeCCCC--CcCCeeCCCCCeEEEEEEEEeCC---CCcEEEECC--------------EEEEeeCCcEEEEcCCeEE
Confidence 4455666754 999999976544444443 12 345554111 1246789999999999999
Q ss_pred CCccCCccceeEEEeec
Q 017010 313 GARATTSGSRVNLLVWC 329 (379)
Q Consensus 313 eglpVTsG~Ry~LV~W~ 329 (379)
++---+.+.|++|++=+
T Consensus 165 ev~N~~d~~RvvL~~D~ 181 (197)
T 3rcq_A 165 EVWQDASSFRLIFIVDV 181 (197)
T ss_dssp EEEECSSSCEEEEEEEE
T ss_pred EEEECCCCCEEEEEEee
Confidence 99999999999998744
No 27
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=46.98 E-value=55 Score=30.30 Aligned_cols=32 Identities=16% Similarity=0.265 Sum_probs=26.2
Q ss_pred CCCccccccCC------ceeEEEecCCcccccceEEec
Q 017010 246 DVELGFHVDDS------EVTLNVCLGREFSGGELFFRG 277 (379)
Q Consensus 246 d~~L~~H~D~S------evTlNI~Ln~dFeGGgl~F~~ 277 (379)
...+.+|.|.| .+++.-|+...=+||+|.|..
T Consensus 102 ~~~~~wHtD~sy~~~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVEAYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSSSCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcCCCCceEEEEEeecCCCCCcccccc
Confidence 45789999998 689999996555899999975
No 28
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=46.55 E-value=5.9 Score=28.16 Aligned_cols=13 Identities=38% Similarity=0.675 Sum_probs=9.5
Q ss_pred ccccchhhhhhhh
Q 017010 344 CSSWCAECQREKK 356 (379)
Q Consensus 344 f~~~c~~c~~~~~ 356 (379)
|+.|||-|...+.
T Consensus 7 ~a~wC~~C~~~~~ 19 (77)
T 1ilo_A 7 YGTGCANCQMLEK 19 (77)
T ss_dssp ECSSSSTTHHHHH
T ss_pred EcCCChhHHHHHH
Confidence 5689999965443
No 29
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=40.87 E-value=74 Score=24.47 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=27.3
Q ss_pred ccCCCceEEEecCCCCcCCccCCccceeEEEeecc
Q 017010 296 YSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCR 330 (379)
Q Consensus 296 y~~~~G~AllH~Grh~HeglpVTsG~Ry~LV~W~r 330 (379)
+...+|.+++.+....|..... .+.++.+|++-.
T Consensus 78 ~~l~~Gd~i~i~~~~~H~~~~~-~~~~~~~i~~~~ 111 (114)
T 2ozj_A 78 IDLVPEDVLMVPAHKIHAIAGK-GRFKMLQITLID 111 (114)
T ss_dssp EEECTTCEEEECTTCCBEEEEE-EEEEEEEEEECC
T ss_pred EEecCCCEEEECCCCcEEEEeC-CCcEEEEEEEcc
Confidence 4578999999999999998875 567887777643
No 30
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=37.52 E-value=9 Score=27.42 Aligned_cols=12 Identities=25% Similarity=0.471 Sum_probs=9.3
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.|||-|...+.
T Consensus 10 ~~~C~~C~~~~~ 21 (85)
T 1nho_A 10 SPTCPYCPMAIE 21 (85)
T ss_dssp CSSSCCSTTHHH
T ss_pred CCCCcchHHHHH
Confidence 589999976554
No 31
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=36.73 E-value=1.4e+02 Score=27.22 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=30.1
Q ss_pred eeEEEEeCCC-CCCccccccCC------ceeEEEecCCcccccceEEec
Q 017010 236 GFVVEYGMDR-DVELGFHVDDS------EVTLNVCLGREFSGGELFFRG 277 (379)
Q Consensus 236 ~FVVrY~~~~-d~~L~~H~D~S------evTlNI~Ln~dFeGGgl~F~~ 277 (379)
.++|.-.++. .....+|.|.| .+++.-|+...=+||+|.|..
T Consensus 82 i~~v~~~~~~~~~~~~wHtD~sy~~~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 82 IIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp EEEEEEBTTBCCCCCSCBCTTTTSSSCEEEEEEEEEECCSSCCCEEEEE
T ss_pred EEEEeCCCCCCCcCCCcEeeccCccCCCceEEEEEEecCCCCCcceeee
Confidence 4556555421 22457999998 689999997656899999985
No 32
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=36.51 E-value=11 Score=28.09 Aligned_cols=11 Identities=18% Similarity=0.516 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 3die_A 29 TACGPCKMIAP 39 (106)
T ss_dssp SBCHHHHHHHH
T ss_pred CCCHHHHHHhH
Confidence 79999965543
No 33
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=36.31 E-value=10 Score=28.03 Aligned_cols=11 Identities=27% Similarity=1.075 Sum_probs=8.5
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.|||.|...+.
T Consensus 29 ~~C~~C~~~~~ 39 (104)
T 2vim_A 29 QWCGPCRNIAP 39 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 79999966554
No 34
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=35.87 E-value=90 Score=24.35 Aligned_cols=40 Identities=8% Similarity=0.069 Sum_probs=27.1
Q ss_pred ccCCCceEEEecCCCCcCCccCCccceeEEEeecchhhHH
Q 017010 296 YSHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFR 335 (379)
Q Consensus 296 y~~~~G~AllH~Grh~HeglpVTsG~Ry~LV~W~rss~~R 335 (379)
+...+|.+++.+....|.........-..+++|+..+.+.
T Consensus 74 ~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~f~~~~~~ 113 (128)
T 4i4a_A 74 FPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIWWDKESTL 113 (128)
T ss_dssp EEEETTCEEEECTTCCEEEEECSSSCEEEEEEEECHHHHH
T ss_pred EEECCCcEEEECCCCcEEeEeCCCCCEEEEEEEECHHHHH
Confidence 4578999999999999998776544323344555555443
No 35
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=34.60 E-value=11 Score=29.70 Aligned_cols=13 Identities=38% Similarity=1.117 Sum_probs=9.7
Q ss_pred ccccchhhhhhhh
Q 017010 344 CSSWCAECQREKK 356 (379)
Q Consensus 344 f~~~c~~c~~~~~ 356 (379)
++.|||-|.+.+.
T Consensus 20 ~A~WC~~C~~~~p 32 (106)
T 3kp8_A 20 GAYWCPHCQDQKE 32 (106)
T ss_dssp ECTTCHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 4689999966543
No 36
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=34.34 E-value=11 Score=27.05 Aligned_cols=12 Identities=33% Similarity=0.844 Sum_probs=9.1
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.|||-|...+.
T Consensus 11 ~~~C~~C~~~~~ 22 (85)
T 1fo5_A 11 SPMCPHCPAAKR 22 (85)
T ss_dssp CCCSSCCCTHHH
T ss_pred CCCCCchHHHHH
Confidence 479999976554
No 37
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=34.03 E-value=12 Score=27.75 Aligned_cols=11 Identities=27% Similarity=1.005 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|...+.
T Consensus 28 ~~C~~C~~~~~ 38 (105)
T 1fb6_A 28 PWCGPCKLIAP 38 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChHHHHHHH
Confidence 79999966554
No 38
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=33.88 E-value=15 Score=28.26 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=8.9
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.||+-|......
T Consensus 27 ~wC~~C~~~~~~ 38 (112)
T 2voc_A 27 PWCGPSKMIAPV 38 (112)
T ss_dssp TTBGGGGGHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999665543
No 39
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=33.66 E-value=12 Score=27.82 Aligned_cols=12 Identities=33% Similarity=1.035 Sum_probs=8.7
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|.....
T Consensus 30 ~~~C~~C~~~~~ 41 (109)
T 3tco_A 30 AEWCAPCHLYEP 41 (109)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHhhhH
Confidence 379999966543
No 40
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=33.12 E-value=12 Score=28.37 Aligned_cols=13 Identities=15% Similarity=0.682 Sum_probs=9.3
Q ss_pred cccchhhhhhhhH
Q 017010 345 SSWCAECQREKKE 357 (379)
Q Consensus 345 ~~~c~~c~~~~~~ 357 (379)
+.|||.|......
T Consensus 33 a~wC~~C~~~~~~ 45 (111)
T 2pu9_C 33 TQWCGPSKAMAPK 45 (111)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCcCHhHHHHCHH
Confidence 3799999665543
No 41
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=32.83 E-value=13 Score=27.87 Aligned_cols=10 Identities=30% Similarity=1.218 Sum_probs=7.8
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+.|....
T Consensus 31 ~~C~~C~~~~ 40 (111)
T 3uvt_A 31 PWCGHCKTLA 40 (111)
T ss_dssp SSCHHHHHHH
T ss_pred CCChhHHHhh
Confidence 7999996544
No 42
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=32.48 E-value=13 Score=28.89 Aligned_cols=12 Identities=25% Similarity=1.013 Sum_probs=9.0
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.|||.|...+..
T Consensus 47 ~wC~~C~~~~~~ 58 (124)
T 1faa_A 47 QWCGPCKAMAPK 58 (124)
T ss_dssp TTCHHHHHHHHH
T ss_pred CcCHhHHHHhHH
Confidence 799999765543
No 43
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=32.36 E-value=13 Score=27.59 Aligned_cols=11 Identities=36% Similarity=1.162 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (105)
T 3m9j_A 30 TWCGPCKMIKP 40 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhhHHHHH
Confidence 79999965544
No 44
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=32.04 E-value=14 Score=28.44 Aligned_cols=11 Identities=27% Similarity=1.078 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 35 ~wC~~C~~~~p 45 (121)
T 2djj_A 35 PWCGHCKALAP 45 (121)
T ss_dssp SSCTTHHHHHH
T ss_pred CCCHhHHHhhH
Confidence 79999966544
No 45
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=31.95 E-value=14 Score=27.11 Aligned_cols=11 Identities=36% Similarity=0.954 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 26 ~~C~~C~~~~~ 36 (104)
T 2e0q_A 26 EWCAPCLILAP 36 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHhH
Confidence 79999966544
No 46
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=31.62 E-value=14 Score=27.56 Aligned_cols=11 Identities=27% Similarity=1.063 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 27 ~~C~~C~~~~~ 37 (105)
T 1nsw_A 27 AWCGPCRMMAP 37 (105)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999965544
No 47
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=31.01 E-value=14 Score=27.63 Aligned_cols=11 Identities=27% Similarity=1.014 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (108)
T 2trx_A 30 EWCGPCKMIAP 40 (108)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999966544
No 48
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=30.95 E-value=14 Score=28.11 Aligned_cols=12 Identities=33% Similarity=0.894 Sum_probs=6.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|.....
T Consensus 30 a~wC~~C~~~~~ 41 (112)
T 3d6i_A 30 TSWAEPCKALKQ 41 (112)
T ss_dssp CCC--CHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999966544
No 49
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=30.93 E-value=14 Score=28.33 Aligned_cols=11 Identities=27% Similarity=1.053 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 34 ~wC~~C~~~~p 44 (109)
T 3f3q_A 34 TWCGPCKMIAP 44 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHhHHHHHH
Confidence 79999966543
No 50
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=30.78 E-value=14 Score=27.79 Aligned_cols=12 Identities=25% Similarity=0.996 Sum_probs=8.8
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|...+.
T Consensus 33 ~~~C~~C~~~~~ 44 (112)
T 1ep7_A 33 ATWCGPCKMIAP 44 (112)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999966554
No 51
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=30.53 E-value=14 Score=27.88 Aligned_cols=12 Identities=33% Similarity=1.088 Sum_probs=9.0
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.||+.|......
T Consensus 34 ~~C~~C~~~~~~ 45 (120)
T 1mek_A 34 PWCGHCKALAPE 45 (120)
T ss_dssp SSCSTTSTTHHH
T ss_pred CCCHHHHHhhHH
Confidence 799999765543
No 52
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=30.45 E-value=15 Score=28.32 Aligned_cols=12 Identities=25% Similarity=1.038 Sum_probs=9.0
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|...+.
T Consensus 42 a~wC~~C~~~~~ 53 (117)
T 2xc2_A 42 ATWCGPCKTIAP 53 (117)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 479999966554
No 53
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=30.33 E-value=15 Score=27.47 Aligned_cols=11 Identities=27% Similarity=0.999 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 29 ~~C~~C~~~~~ 39 (107)
T 1dby_A 29 PWCGPCRIIAP 39 (107)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999966544
No 54
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=30.24 E-value=15 Score=28.65 Aligned_cols=12 Identities=42% Similarity=1.301 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 36 a~wC~~C~~~~~ 47 (130)
T 2kuc_A 36 TTWCGPCKRLSK 47 (130)
T ss_dssp CTTCTHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 379999976544
No 55
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=30.22 E-value=15 Score=27.79 Aligned_cols=11 Identities=27% Similarity=1.138 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 33 ~~C~~C~~~~~ 43 (112)
T 1t00_A 33 AWCGPCRQIAP 43 (112)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHhHHhcCH
Confidence 79999965543
No 56
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=30.22 E-value=15 Score=27.20 Aligned_cols=11 Identities=36% Similarity=1.072 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 28 ~~C~~C~~~~~ 38 (109)
T 2yzu_A 28 EWCAPCRMIAP 38 (109)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHhhH
Confidence 79999965544
No 57
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=30.19 E-value=15 Score=27.78 Aligned_cols=10 Identities=20% Similarity=0.435 Sum_probs=8.0
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.|||-|...+
T Consensus 28 ~wC~~C~~~~ 37 (105)
T 4euy_A 28 ENCGVCDVML 37 (105)
T ss_dssp SSCHHHHHHH
T ss_pred CCCcchHHHH
Confidence 7999996654
No 58
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=29.93 E-value=15 Score=27.18 Aligned_cols=12 Identities=25% Similarity=1.010 Sum_probs=8.7
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|.....
T Consensus 29 ~~~C~~C~~~~~ 40 (106)
T 1xwb_A 29 ATWCGPCKMISP 40 (106)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCcCHHHHHhhH
Confidence 479999965544
No 59
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=29.90 E-value=15 Score=27.64 Aligned_cols=12 Identities=25% Similarity=0.468 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 30 a~wC~~C~~~~~ 41 (107)
T 1gh2_A 30 MRGCGPCLRIAP 41 (107)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCChhhHHHHH
Confidence 489999966544
No 60
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=29.48 E-value=15 Score=26.84 Aligned_cols=12 Identities=17% Similarity=0.537 Sum_probs=9.4
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.|||-|.+-+.
T Consensus 9 ~~~C~~C~~~~~ 20 (80)
T 2k8s_A 9 HAGCPVCVSAEQ 20 (80)
T ss_dssp ECSCHHHHHHHH
T ss_pred CCCCCchHHHHH
Confidence 479999976665
No 61
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=29.47 E-value=23 Score=32.29 Aligned_cols=32 Identities=16% Similarity=0.083 Sum_probs=26.9
Q ss_pred CCccccccCC------ceeEEEecCCcc--cccceEEecc
Q 017010 247 VELGFHVDDS------EVTLNVCLGREF--SGGELFFRGV 278 (379)
Q Consensus 247 ~~L~~H~D~S------evTlNI~Ln~dF--eGGgl~F~~~ 278 (379)
..+.+|.|.| .+++.-|+...= +||++.|...
T Consensus 96 ~~~~~HtD~sy~~~pp~~~~L~c~~~p~~~~GG~T~~~d~ 135 (273)
T 1nx8_A 96 GQLPFHADGGLLLSQVDQVFLYAAEIKNVKFRGATTVCDH 135 (273)
T ss_dssp SCEEEECTTTTTTCCCCEEEEEEEEEESCSSSSCEEEEEH
T ss_pred cCCCCcCCCCCccCCCeeEEEEeEeCCCCCCCCcchhhhH
Confidence 4788999998 789999997655 8999999853
No 62
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=29.38 E-value=16 Score=28.28 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=8.8
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.|||-|.+...
T Consensus 38 a~wC~~C~~~~p 49 (118)
T 1zma_A 38 RKTCPYCRKFAG 49 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCccHHHHHH
Confidence 489999976543
No 63
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=29.31 E-value=16 Score=27.98 Aligned_cols=12 Identities=33% Similarity=0.999 Sum_probs=8.8
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.||+-|...+..
T Consensus 36 ~~C~~C~~~~~~ 47 (112)
T 1syr_A 36 EWCGPCKRIAPF 47 (112)
T ss_dssp TTCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999665543
No 64
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=29.20 E-value=16 Score=28.07 Aligned_cols=11 Identities=45% Similarity=1.274 Sum_probs=8.2
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 35 ~~C~~C~~~~~ 45 (136)
T 1zzo_A 35 PWCPTCQGEAP 45 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999966543
No 65
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=29.11 E-value=16 Score=27.44 Aligned_cols=11 Identities=45% Similarity=1.132 Sum_probs=8.2
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 35 ~~C~~C~~~~~ 45 (115)
T 1thx_A 35 SWCGPCQLMSP 45 (115)
T ss_dssp TTCTTHHHHHH
T ss_pred CCCHHHHHhHH
Confidence 79999965543
No 66
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=28.50 E-value=17 Score=27.28 Aligned_cols=10 Identities=30% Similarity=0.680 Sum_probs=7.7
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+.|....
T Consensus 32 ~~C~~C~~~~ 41 (111)
T 3gnj_A 32 KNCHVCQKVT 41 (111)
T ss_dssp SSCHHHHHHH
T ss_pred CCChhHHHHH
Confidence 7999996544
No 67
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.48 E-value=17 Score=28.40 Aligned_cols=12 Identities=42% Similarity=1.182 Sum_probs=8.9
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.||+-|......
T Consensus 32 ~wC~~C~~~~p~ 43 (126)
T 1x5e_A 32 PWCPACQNLQPE 43 (126)
T ss_dssp SSCHHHHHHHHH
T ss_pred CCCHHHHHHhHH
Confidence 799999665543
No 68
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=28.40 E-value=17 Score=28.05 Aligned_cols=11 Identities=36% Similarity=1.081 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 31 ~~C~~C~~~~~ 41 (122)
T 3aps_A 31 PWCGPCQNFAP 41 (122)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966544
No 69
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=28.34 E-value=18 Score=28.15 Aligned_cols=12 Identities=50% Similarity=1.282 Sum_probs=9.0
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.||+-|......
T Consensus 45 ~wC~~C~~~~~~ 56 (130)
T 2dml_A 45 PWCGHCQRLTPE 56 (130)
T ss_dssp TTCSTTGGGHHH
T ss_pred CCCHHHHhhCHH
Confidence 799999765543
No 70
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=28.21 E-value=17 Score=28.69 Aligned_cols=11 Identities=27% Similarity=1.129 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 52 ~wC~~C~~~~p 62 (128)
T 3ul3_B 52 KWCQACTMQST 62 (128)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHhH
Confidence 79999966544
No 71
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=28.06 E-value=17 Score=27.91 Aligned_cols=11 Identities=27% Similarity=0.851 Sum_probs=8.5
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|...+.
T Consensus 29 ~wC~~C~~~~~ 39 (110)
T 2l6c_A 29 NLCPHCKNMEK 39 (110)
T ss_dssp SSCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999976544
No 72
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=28.05 E-value=28 Score=28.09 Aligned_cols=22 Identities=32% Similarity=0.543 Sum_probs=15.0
Q ss_pred ccceeEEEeecchhhHHHHHhhhhhccccchhhhhh
Q 017010 319 SGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQRE 354 (379)
Q Consensus 319 sG~Ry~LV~W~rss~~R~~~~y~~~f~~~c~~c~~~ 354 (379)
.|.++++|.|.++ .||+-|..+
T Consensus 34 ~gk~~vvl~F~~a--------------~~C~~C~~~ 55 (160)
T 1xvw_A 34 RGAKNVLLVFFPL--------------AFTGICQGE 55 (160)
T ss_dssp TTTCEEEEEECSC--------------TTSSHHHHH
T ss_pred cCCCCEEEEEECC--------------CCCCchHHH
Confidence 5766777666532 799999544
No 73
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=27.96 E-value=17 Score=28.26 Aligned_cols=12 Identities=25% Similarity=0.780 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 40 a~wC~~C~~~~p 51 (116)
T 3qfa_C 40 ATWCGPSKMIKP 51 (116)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999966544
No 74
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=27.75 E-value=17 Score=28.31 Aligned_cols=12 Identities=25% Similarity=1.049 Sum_probs=9.1
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.||+-|...+..
T Consensus 40 ~wC~~C~~~~p~ 51 (114)
T 2oe3_A 40 TWCGPCKMMQPH 51 (114)
T ss_dssp TTCHHHHHTHHH
T ss_pred CCCHHHHHHHHH
Confidence 799999766543
No 75
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=27.74 E-value=17 Score=28.01 Aligned_cols=11 Identities=36% Similarity=1.111 Sum_probs=8.2
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 34 ~~C~~C~~~~~ 44 (136)
T 1lu4_A 34 PWCPFCNAEAP 44 (136)
T ss_dssp TTCHHHHHHHH
T ss_pred CcChhHHHHHH
Confidence 79999965443
No 76
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=27.56 E-value=18 Score=28.18 Aligned_cols=11 Identities=27% Similarity=0.969 Sum_probs=8.2
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 41 ~~C~~C~~~~~ 51 (119)
T 1w4v_A 41 QWCGPCKILGP 51 (119)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999965543
No 77
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=27.48 E-value=18 Score=26.83 Aligned_cols=11 Identities=27% Similarity=0.993 Sum_probs=8.2
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 30 ~~C~~C~~~~~ 40 (107)
T 2i4a_A 30 EWCGPCKMIGP 40 (107)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHhH
Confidence 79999965544
No 78
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=27.30 E-value=18 Score=28.50 Aligned_cols=12 Identities=33% Similarity=1.229 Sum_probs=9.2
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|...+.
T Consensus 38 a~wC~~C~~~~~ 49 (133)
T 3fk8_A 38 ANWCTDCRALDK 49 (133)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 489999976554
No 79
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=27.03 E-value=18 Score=28.15 Aligned_cols=11 Identities=27% Similarity=0.583 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (126)
T 2l57_A 36 DTCPYCVEMQK 46 (126)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 79999965544
No 80
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=27.01 E-value=18 Score=28.27 Aligned_cols=12 Identities=42% Similarity=1.243 Sum_probs=8.6
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 32 a~wC~~C~~~~~ 43 (118)
T 2f51_A 32 ATWCGPCQRLGQ 43 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999965443
No 81
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=26.74 E-value=18 Score=28.84 Aligned_cols=11 Identities=27% Similarity=1.153 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 017010 345 SSWCAECQREK 355 (379)
Q Consensus 345 ~~~c~~c~~~~ 355 (379)
+.||+-|....
T Consensus 40 a~wC~~C~~~~ 50 (134)
T 2fwh_A 40 ADWCVACKEFE 50 (134)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 37999996643
No 82
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=26.66 E-value=19 Score=28.56 Aligned_cols=13 Identities=31% Similarity=0.887 Sum_probs=9.5
Q ss_pred ccccchhhhhhhh
Q 017010 344 CSSWCAECQREKK 356 (379)
Q Consensus 344 f~~~c~~c~~~~~ 356 (379)
++.||+-|.....
T Consensus 46 ~a~wC~~C~~~~~ 58 (124)
T 1xfl_A 46 TASWCGPCRFIAP 58 (124)
T ss_dssp ECTTCHHHHHHHH
T ss_pred ECCCCHHHHHHHH
Confidence 3589999966554
No 83
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=26.58 E-value=18 Score=27.85 Aligned_cols=11 Identities=36% Similarity=1.047 Sum_probs=8.6
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.|||-|...+.
T Consensus 28 ~~C~~C~~~~~ 38 (116)
T 2e7p_A 28 TYCGYCNRVKQ 38 (116)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999976554
No 84
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=26.57 E-value=19 Score=28.82 Aligned_cols=11 Identities=27% Similarity=1.047 Sum_probs=8.5
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 48 ~wC~~C~~~~~ 58 (136)
T 2l5l_A 48 DWCGPCKMVAP 58 (136)
T ss_dssp TTSHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 79999966554
No 85
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.43 E-value=19 Score=28.04 Aligned_cols=11 Identities=27% Similarity=1.153 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 35 ~wC~~C~~~~~ 45 (133)
T 1x5d_A 35 PWCGHCKNLEP 45 (133)
T ss_dssp TTCHHHHTHHH
T ss_pred CCCHHHHhhcH
Confidence 79999965544
No 86
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=26.36 E-value=19 Score=28.51 Aligned_cols=10 Identities=30% Similarity=1.172 Sum_probs=7.8
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+.|....
T Consensus 61 ~wC~~C~~~~ 70 (141)
T 3hxs_A 61 DWCGPCKMVA 70 (141)
T ss_dssp TTCTTHHHHH
T ss_pred CCCHHHHHHH
Confidence 6999996554
No 87
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=26.18 E-value=20 Score=26.99 Aligned_cols=12 Identities=33% Similarity=1.010 Sum_probs=8.6
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|.....
T Consensus 35 ~~~C~~C~~~~~ 46 (113)
T 1ti3_A 35 ASWCPPCKMIAP 46 (113)
T ss_dssp CSSCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999965543
No 88
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=26.04 E-value=19 Score=28.10 Aligned_cols=11 Identities=27% Similarity=1.032 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|...+.
T Consensus 43 ~~C~~C~~~~~ 53 (121)
T 2j23_A 43 TWCGPCKMIGP 53 (121)
T ss_dssp TTCSTHHHHHH
T ss_pred CCCHhHHHHHH
Confidence 79999976544
No 89
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=26.03 E-value=19 Score=28.94 Aligned_cols=11 Identities=36% Similarity=1.232 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 44 ~~C~~C~~~~~ 54 (165)
T 3or5_A 44 TWCPPCRSEIP 54 (165)
T ss_dssp TTSHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 79999976543
No 90
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=26.03 E-value=20 Score=27.96 Aligned_cols=11 Identities=45% Similarity=1.340 Sum_probs=8.2
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 44 ~~C~~C~~~~~ 54 (145)
T 3erw_A 44 SWCPPCKKELP 54 (145)
T ss_dssp SSCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966443
No 91
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=25.92 E-value=20 Score=28.17 Aligned_cols=11 Identities=9% Similarity=0.419 Sum_probs=8.5
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.+...
T Consensus 43 ~wC~~C~~~~p 53 (127)
T 3h79_A 43 PWSRHSVAAMR 53 (127)
T ss_dssp TTCHHHHHHHH
T ss_pred CccHHHHHHhH
Confidence 79999966544
No 92
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=25.91 E-value=22 Score=28.25 Aligned_cols=11 Identities=36% Similarity=1.214 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 40 ~~C~~C~~~~~ 50 (152)
T 2lja_A 40 TWCGPCRGELP 50 (152)
T ss_dssp SSCCGGGGTHH
T ss_pred CcCHhHHHHhH
Confidence 79999965543
No 93
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=25.91 E-value=20 Score=28.61 Aligned_cols=10 Identities=50% Similarity=1.434 Sum_probs=7.7
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+.|....
T Consensus 52 ~~C~~C~~~~ 61 (156)
T 1kng_A 52 SWCVPCHDEA 61 (156)
T ss_dssp TTCHHHHHHH
T ss_pred ccCHhHHHHH
Confidence 7999996544
No 94
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=25.82 E-value=20 Score=27.61 Aligned_cols=12 Identities=33% Similarity=1.016 Sum_probs=8.8
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 43 ~~~C~~C~~~~~ 54 (122)
T 2vlu_A 43 ASWCGPCRIMAP 54 (122)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 379999965544
No 95
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.82 E-value=20 Score=28.09 Aligned_cols=11 Identities=27% Similarity=1.189 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 35 ~wC~~C~~~~p 45 (133)
T 2dj3_A 35 PWCGHCKQLEP 45 (133)
T ss_dssp TTCSHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999966554
No 96
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=25.68 E-value=20 Score=27.26 Aligned_cols=10 Identities=40% Similarity=1.122 Sum_probs=7.6
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 32 ~~C~~C~~~~ 41 (138)
T 4evm_A 32 SWCSICLASL 41 (138)
T ss_dssp TTCHHHHHHH
T ss_pred CcCHHHHHHH
Confidence 8999995443
No 97
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=25.57 E-value=1.3e+02 Score=22.76 Aligned_cols=31 Identities=16% Similarity=0.133 Sum_probs=23.8
Q ss_pred cCCCceEEEecCCCCcCCccCCccceeEEEee
Q 017010 297 SHVPGYAVLHRGRHRHGARATTSGSRVNLLVW 328 (379)
Q Consensus 297 ~~~~G~AllH~Grh~HeglpVTsG~Ry~LV~W 328 (379)
...+|.+++.+....|...... ..++.+|.+
T Consensus 81 ~l~~Gd~~~ip~~~~H~~~~~~-~~~~~~v~~ 111 (115)
T 1yhf_A 81 RVAEGQTIVMPAGIPHALYAVE-AFQMLLVVV 111 (115)
T ss_dssp EEETTCEEEECTTSCEEEEESS-CEEEEEEEE
T ss_pred EECCCCEEEECCCCCEEEEECC-CceEEEEEE
Confidence 5688999999999999988765 556655543
No 98
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=25.56 E-value=20 Score=27.13 Aligned_cols=12 Identities=33% Similarity=1.007 Sum_probs=8.7
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|.....
T Consensus 37 ~~~C~~C~~~~~ 48 (118)
T 2vm1_A 37 ASWCGPCRVIAP 48 (118)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHhH
Confidence 379999965543
No 99
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=31.22 E-value=15 Score=26.97 Aligned_cols=11 Identities=27% Similarity=1.020 Sum_probs=8.5
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|...+.
T Consensus 29 ~~C~~C~~~~~ 39 (106)
T 2yj7_A 29 PWCGPCRMIAP 39 (106)
Confidence 79999976544
No 100
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=25.14 E-value=21 Score=27.92 Aligned_cols=10 Identities=20% Similarity=0.494 Sum_probs=7.6
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 39 ~~C~~C~~~~ 48 (148)
T 2b5x_A 39 ISCHLCKEAM 48 (148)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHh
Confidence 7999996543
No 101
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=24.86 E-value=21 Score=28.64 Aligned_cols=10 Identities=30% Similarity=0.847 Sum_probs=8.0
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.|||-|....
T Consensus 41 ~wC~~C~~~~ 50 (135)
T 3emx_A 41 KTCPHCHRDW 50 (135)
T ss_dssp TTCHHHHHHH
T ss_pred CcCHhhhHhC
Confidence 7999996654
No 102
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.72 E-value=21 Score=28.19 Aligned_cols=11 Identities=27% Similarity=1.108 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 44 ~wC~~C~~~~p 54 (140)
T 2dj1_A 44 PWCGHCKQFAP 54 (140)
T ss_dssp TTCHHHHTTHH
T ss_pred CCCHHHHHhhH
Confidence 79999966544
No 103
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=24.61 E-value=1.9e+02 Score=26.60 Aligned_cols=32 Identities=13% Similarity=0.084 Sum_probs=25.7
Q ss_pred CCCccccccCCc------eeEEEecCCcccccceEEec
Q 017010 246 DVELGFHVDDSE------VTLNVCLGREFSGGELFFRG 277 (379)
Q Consensus 246 d~~L~~H~D~Se------vTlNI~Ln~dFeGGgl~F~~ 277 (379)
...+.+|.|.|- +++.-|+.-.=+||+|.|..
T Consensus 91 ~~~~~wH~D~sy~~~pp~~~~l~~~~~p~~GG~T~~~d 128 (277)
T 3pvj_A 91 RDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWAS 128 (277)
T ss_dssp GGGSSCBCTTTTSSSCCCEEEEEEEECCSSCCCEEEEE
T ss_pred CcCCCceeeCCCcCCCCceEEEEeeccCCCCCCcEeee
Confidence 356889999875 78888886555899999974
No 104
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=24.42 E-value=21 Score=29.39 Aligned_cols=12 Identities=33% Similarity=0.991 Sum_probs=9.1
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.|||-|.....
T Consensus 57 a~wC~~C~~~~p 68 (154)
T 2ju5_A 57 SDWCMWCIKMQD 68 (154)
T ss_dssp TTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 389999976654
No 105
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=24.38 E-value=22 Score=28.58 Aligned_cols=11 Identities=36% Similarity=1.346 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 34 ~wC~~C~~~~~ 44 (151)
T 3raz_A 34 TWCGPCRKEMP 44 (151)
T ss_dssp TTCHHHHHHHH
T ss_pred CcCHHHHHHHH
Confidence 79999966544
No 106
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=24.24 E-value=53 Score=33.68 Aligned_cols=45 Identities=9% Similarity=0.083 Sum_probs=36.2
Q ss_pred cCCCceEEEecCCCCcCCccCCccceeEEEeecchhhHHHHHhhhhhccccchhhhhhhhH
Q 017010 297 SHVPGYAVLHRGRHRHGARATTSGSRVNLLVWCRSSVFRELKKYQKECSSWCAECQREKKE 357 (379)
Q Consensus 297 ~~~~G~AllH~Grh~HeglpVTsG~Ry~LV~W~rss~~R~~~~y~~~f~~~c~~c~~~~~~ 357 (379)
...||..|+..+...|++.++.+|...-.|+.+ .-||.|..+..-
T Consensus 370 ~vePGD~V~WH~D~iH~V~~~h~g~~~s~V~YI----------------pa~P~~~~N~~y 414 (461)
T 2dbn_A 370 KLEAGDSVWWHCDVIHSVAPVENQQGWGNVMYI----------------PAAPMCEKNLAY 414 (461)
T ss_dssp CBCTTCEEEEETTCCEEECCBSSCCSCCCEEEC----------------CBCEESHHHHHH
T ss_pred CCCCCCEEEEcCCCccccccCCCCCcceeEEEe----------------cCCCCcccCHHH
Confidence 468999999999999999999999877666543 348888766554
No 107
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=24.20 E-value=22 Score=27.11 Aligned_cols=11 Identities=27% Similarity=1.078 Sum_probs=8.4
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 40 ~~C~~C~~~~~ 50 (121)
T 2i1u_A 40 TWCGPCKMVAP 50 (121)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966554
No 108
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=24.19 E-value=19 Score=28.32 Aligned_cols=10 Identities=20% Similarity=0.724 Sum_probs=8.1
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.|||-|..+.
T Consensus 37 ~~C~~C~~~~ 46 (142)
T 3ewl_A 37 PDCSNCRKFE 46 (142)
T ss_dssp SSCHHHHHHH
T ss_pred CCCccHHHHH
Confidence 7999997753
No 109
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=24.19 E-value=21 Score=27.92 Aligned_cols=11 Identities=45% Similarity=0.930 Sum_probs=8.5
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 41 ~~C~~C~~~~~ 51 (148)
T 3hcz_A 41 SQCGHCQQETP 51 (148)
T ss_dssp GGGCTTCSHHH
T ss_pred CCCccHHHHHH
Confidence 79999976543
No 110
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=24.18 E-value=22 Score=28.18 Aligned_cols=12 Identities=17% Similarity=0.722 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 55 a~wC~~C~~~~~ 66 (139)
T 3d22_A 55 ARWCGPSRQIAP 66 (139)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 479999966554
No 111
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=23.85 E-value=23 Score=28.14 Aligned_cols=10 Identities=30% Similarity=0.830 Sum_probs=7.7
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 38 ~wC~~C~~~~ 47 (144)
T 1i5g_A 38 SWCPPSRAFT 47 (144)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 7999996544
No 112
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=23.75 E-value=23 Score=28.29 Aligned_cols=12 Identities=17% Similarity=0.656 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 49 a~wC~~C~~~~p 60 (128)
T 2o8v_B 49 AEWCGPAKMIAP 60 (128)
T ss_dssp CSSCHHHHHTHH
T ss_pred CCCCHHHHHHhH
Confidence 489999966544
No 113
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=23.62 E-value=23 Score=27.79 Aligned_cols=10 Identities=30% Similarity=0.856 Sum_probs=7.7
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 43 ~~C~~C~~~~ 52 (148)
T 3fkf_A 43 SWCDPQPEAN 52 (148)
T ss_dssp GGGCCCHHHH
T ss_pred CCCHHHHHHh
Confidence 7999996543
No 114
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.36 E-value=23 Score=28.21 Aligned_cols=13 Identities=23% Similarity=0.644 Sum_probs=9.5
Q ss_pred cccchhhhhhhhH
Q 017010 345 SSWCAECQREKKE 357 (379)
Q Consensus 345 ~~~c~~c~~~~~~ 357 (379)
+.||+-|......
T Consensus 35 a~wC~~C~~~~p~ 47 (137)
T 2dj0_A 35 ANWSNDCQSFAPI 47 (137)
T ss_dssp CTTCSTTTTTHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4799999766543
No 115
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=23.29 E-value=23 Score=29.28 Aligned_cols=12 Identities=8% Similarity=0.025 Sum_probs=9.0
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.|||-|.....
T Consensus 32 a~WC~~C~~~~p 43 (149)
T 3gix_A 32 RDEDPVCLQLDD 43 (149)
T ss_dssp CTTSHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 489999966544
No 116
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=23.23 E-value=23 Score=28.40 Aligned_cols=12 Identities=33% Similarity=1.151 Sum_probs=8.8
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 49 a~wC~~C~~~~p 60 (133)
T 3cxg_A 49 AVWCKPCNKIKE 60 (133)
T ss_dssp CTTCHHHHHTHH
T ss_pred CCCCHHHHHHHH
Confidence 379999976543
No 117
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=23.23 E-value=2.6e+02 Score=23.49 Aligned_cols=22 Identities=14% Similarity=0.055 Sum_probs=18.7
Q ss_pred ccCCCceEEEecCCCCcCCccC
Q 017010 296 YSHVPGYAVLHRGRHRHGARAT 317 (379)
Q Consensus 296 y~~~~G~AllH~Grh~HeglpV 317 (379)
+...+|.++.+++...|....+
T Consensus 164 ~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 164 ALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp EEECTTCEEEECTTCCEEEEES
T ss_pred EEECCCCEEEeCCCCceEEEec
Confidence 4578999999999999987765
No 118
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=22.99 E-value=2.1e+02 Score=22.38 Aligned_cols=33 Identities=18% Similarity=0.054 Sum_probs=24.5
Q ss_pred ccCCCceEEEecCCCCcCCccCCcc--ceeEEEee
Q 017010 296 YSHVPGYAVLHRGRHRHGARATTSG--SRVNLLVW 328 (379)
Q Consensus 296 y~~~~G~AllH~Grh~HeglpVTsG--~Ry~LV~W 328 (379)
+...+|.+++.|....|....++.. ..|+.|.|
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 3578999999999999998887755 33444443
No 119
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=22.88 E-value=24 Score=28.36 Aligned_cols=11 Identities=18% Similarity=0.513 Sum_probs=8.1
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 34 ~wC~~C~~~~~ 44 (140)
T 3hz4_A 34 PACPYCKAMEP 44 (140)
T ss_dssp TTCHHHHHHHH
T ss_pred CCChhHHHHHH
Confidence 79999965443
No 120
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=22.76 E-value=25 Score=27.92 Aligned_cols=11 Identities=18% Similarity=0.483 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|..+-.
T Consensus 41 ~wC~~C~~~~~ 51 (142)
T 3eur_A 41 PGCHACAEMIE 51 (142)
T ss_dssp SSSHHHHHHHH
T ss_pred CCCccHHHHHH
Confidence 89999965533
No 121
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=22.70 E-value=21 Score=27.68 Aligned_cols=12 Identities=33% Similarity=0.974 Sum_probs=9.1
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+.|.....
T Consensus 45 ~~~C~~C~~~~~ 56 (130)
T 1wmj_A 45 ASWCGPCRFIAP 56 (130)
T ss_dssp SSSCSCSSSSHH
T ss_pred CCCChhHHHHHH
Confidence 379999976554
No 122
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=22.47 E-value=25 Score=28.30 Aligned_cols=11 Identities=45% Similarity=1.075 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 48 ~~C~~C~~~~~ 58 (164)
T 2h30_A 48 SWCPLCLSELG 58 (164)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999966543
No 123
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=22.28 E-value=22 Score=28.58 Aligned_cols=9 Identities=22% Similarity=0.652 Sum_probs=7.5
Q ss_pred ccchhhhhh
Q 017010 346 SWCAECQRE 354 (379)
Q Consensus 346 ~~c~~c~~~ 354 (379)
.||+-|..+
T Consensus 38 ~wC~~C~~~ 46 (158)
T 3eyt_A 38 MLCPGCVMH 46 (158)
T ss_dssp TTCHHHHHT
T ss_pred CcCcchhhh
Confidence 799999764
No 124
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=22.03 E-value=25 Score=25.33 Aligned_cols=12 Identities=42% Similarity=0.636 Sum_probs=9.1
Q ss_pred ccchhhhhhhhH
Q 017010 346 SWCAECQREKKE 357 (379)
Q Consensus 346 ~~c~~c~~~~~~ 357 (379)
.|||-|.+-+..
T Consensus 9 ~~C~~C~~~~~~ 20 (85)
T 1ego_A 9 SGCPYCVRAKDL 20 (85)
T ss_dssp TTSTHHHHHHHH
T ss_pred CCCCCHHHHHHH
Confidence 799999766543
No 125
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=22.02 E-value=26 Score=27.62 Aligned_cols=11 Identities=36% Similarity=1.069 Sum_probs=8.0
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+-|.....
T Consensus 38 ~wC~~C~~~~~ 48 (144)
T 1o73_A 38 SWCPPCRGFTP 48 (144)
T ss_dssp TTCHHHHHHHH
T ss_pred cCCHHHHHHHH
Confidence 69999965543
No 126
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=21.77 E-value=22 Score=28.46 Aligned_cols=9 Identities=22% Similarity=0.726 Sum_probs=7.3
Q ss_pred ccchhhhhh
Q 017010 346 SWCAECQRE 354 (379)
Q Consensus 346 ~~c~~c~~~ 354 (379)
.||+-|..+
T Consensus 40 ~~C~~C~~e 48 (160)
T 3lor_A 40 MLCPGCVNH 48 (160)
T ss_dssp TTCHHHHHT
T ss_pred CCCcchhhh
Confidence 799999653
No 127
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=21.71 E-value=26 Score=28.98 Aligned_cols=10 Identities=20% Similarity=0.690 Sum_probs=7.8
Q ss_pred cccchhhhhh
Q 017010 345 SSWCAECQRE 354 (379)
Q Consensus 345 ~~~c~~c~~~ 354 (379)
..||+-|...
T Consensus 56 A~WC~~C~~~ 65 (172)
T 3f9u_A 56 GYGCVNCRKM 65 (172)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 3899999753
No 128
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=21.68 E-value=24 Score=30.40 Aligned_cols=12 Identities=33% Similarity=1.046 Sum_probs=9.1
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
.+|||-|.+...
T Consensus 63 A~WC~pC~~~~P 74 (167)
T 1z6n_A 63 EMWCPDCQINLA 74 (167)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCChhHHHHHH
Confidence 389999976654
No 129
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=21.65 E-value=26 Score=29.37 Aligned_cols=14 Identities=36% Similarity=0.966 Sum_probs=10.5
Q ss_pred ccccchhhhhhhhH
Q 017010 344 CSSWCAECQREKKE 357 (379)
Q Consensus 344 f~~~c~~c~~~~~~ 357 (379)
++.|||-|......
T Consensus 54 ~a~WC~~C~~~~p~ 67 (164)
T 1sen_A 54 HKSWCGACKALKPK 67 (164)
T ss_dssp ECTTCHHHHHHHHH
T ss_pred ECCCCHHHHHHHHH
Confidence 45899999776653
No 130
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=21.33 E-value=27 Score=27.82 Aligned_cols=10 Identities=40% Similarity=1.421 Sum_probs=7.6
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 36 ~~C~~C~~~~ 45 (151)
T 2f9s_A 36 TWCEPCKKEF 45 (151)
T ss_dssp TTCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 7999996543
No 131
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=21.33 E-value=28 Score=27.64 Aligned_cols=10 Identities=40% Similarity=1.308 Sum_probs=7.7
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 38 ~~C~~C~~~~ 47 (152)
T 3gl3_A 38 SWCGPCRQSF 47 (152)
T ss_dssp TTCTHHHHHH
T ss_pred CcCHHHHHHH
Confidence 7999996544
No 132
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=21.33 E-value=28 Score=28.31 Aligned_cols=10 Identities=30% Similarity=1.102 Sum_probs=7.8
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+.|...-
T Consensus 47 ~~C~~C~~~~ 56 (165)
T 3ha9_A 47 AWCPSCVYMA 56 (165)
T ss_dssp TTCTTHHHHH
T ss_pred CCCcchhhhH
Confidence 8999996544
No 133
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=21.21 E-value=23 Score=29.35 Aligned_cols=13 Identities=15% Similarity=0.215 Sum_probs=10.0
Q ss_pred cccchhhhhhhhH
Q 017010 345 SSWCAECQREKKE 357 (379)
Q Consensus 345 ~~~c~~c~~~~~~ 357 (379)
|.|||-|.+-...
T Consensus 33 atwCgpc~~~~~~ 45 (112)
T 3iv4_A 33 SETCPISANAYDQ 45 (112)
T ss_dssp CTTCHHHHHHHHH
T ss_pred CCcCHhHHHHHHH
Confidence 6799999775554
No 134
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=21.12 E-value=28 Score=27.91 Aligned_cols=10 Identities=30% Similarity=0.827 Sum_probs=7.6
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 39 ~~C~~C~~~~ 48 (152)
T 2lrn_A 39 AGCSWCRKET 48 (152)
T ss_dssp TTCTTHHHHH
T ss_pred CCChhHHHHH
Confidence 6999996543
No 135
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=21.11 E-value=28 Score=27.25 Aligned_cols=11 Identities=27% Similarity=1.105 Sum_probs=8.2
Q ss_pred cccchhhhhhh
Q 017010 345 SSWCAECQREK 355 (379)
Q Consensus 345 ~~~c~~c~~~~ 355 (379)
+.|||-|..-.
T Consensus 29 a~wC~~C~~~~ 39 (105)
T 3zzx_A 29 ATWCGPCKMIA 39 (105)
T ss_dssp CTTCHHHHHHH
T ss_pred CCCCCCccCCC
Confidence 48999996543
No 136
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=20.77 E-value=29 Score=27.55 Aligned_cols=10 Identities=30% Similarity=0.670 Sum_probs=7.6
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 38 ~~C~~C~~~~ 47 (153)
T 2l5o_A 38 PSCPGCVSEM 47 (153)
T ss_dssp TTCTTHHHHH
T ss_pred CCCccHHHHH
Confidence 6999996543
No 137
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=26.22 E-value=21 Score=27.99 Aligned_cols=11 Identities=27% Similarity=0.996 Sum_probs=8.3
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.|||-|.....
T Consensus 36 ~wC~~C~~~~~ 46 (143)
T 2lus_A 36 HWCPPCRGFTP 46 (143)
Confidence 79999965543
No 138
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=20.70 E-value=28 Score=27.68 Aligned_cols=10 Identities=30% Similarity=0.830 Sum_probs=7.6
Q ss_pred ccchhhhhhh
Q 017010 346 SWCAECQREK 355 (379)
Q Consensus 346 ~~c~~c~~~~ 355 (379)
.||+-|....
T Consensus 38 ~wC~~C~~~~ 47 (146)
T 1o8x_A 38 SWCPPARGFT 47 (146)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 7999995543
No 139
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=20.59 E-value=2.6e+02 Score=20.62 Aligned_cols=25 Identities=16% Similarity=0.110 Sum_probs=20.3
Q ss_pred ccCCCceEEEecCCCCcCCccCCcc
Q 017010 296 YSHVPGYAVLHRGRHRHGARATTSG 320 (379)
Q Consensus 296 y~~~~G~AllH~Grh~HeglpVTsG 320 (379)
+...+|.+++.+....|........
T Consensus 64 ~~l~~Gd~~~i~~~~~H~~~~~~~~ 88 (113)
T 2gu9_A 64 QALQAGSLIAIERGQAHEIRNTGDT 88 (113)
T ss_dssp EEECTTEEEEECTTCCEEEECCSSS
T ss_pred EEeCCCCEEEECCCCcEEeEcCCCC
Confidence 3578999999999999998776543
No 140
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=20.53 E-value=29 Score=27.59 Aligned_cols=11 Identities=36% Similarity=1.250 Sum_probs=8.1
Q ss_pred ccchhhhhhhh
Q 017010 346 SWCAECQREKK 356 (379)
Q Consensus 346 ~~c~~c~~~~~ 356 (379)
.||+.|.....
T Consensus 38 ~~C~~C~~~~~ 48 (154)
T 3kcm_A 38 TWCPPCREEIP 48 (154)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 79999976443
No 141
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=20.50 E-value=29 Score=28.41 Aligned_cols=12 Identities=17% Similarity=0.861 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 41 a~wC~~C~~~~p 52 (153)
T 2wz9_A 41 APWAPQCAQMNE 52 (153)
T ss_dssp CTTCHHHHHHHH
T ss_pred CCCCHhHHHHHH
Confidence 379999966544
No 142
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=25.46 E-value=22 Score=27.76 Aligned_cols=12 Identities=33% Similarity=0.703 Sum_probs=8.9
Q ss_pred cccchhhhhhhh
Q 017010 345 SSWCAECQREKK 356 (379)
Q Consensus 345 ~~~c~~c~~~~~ 356 (379)
+.||+-|.....
T Consensus 28 a~wC~~C~~~~~ 39 (130)
T 2lst_A 28 SEHCPYCQQMNT 39 (130)
Confidence 389999976543
Done!