BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017011
(379 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D
Length = 375
Score = 531 bits (1367), Expect = e-151, Method: Compositional matrix adjust.
Identities = 244/372 (65%), Positives = 302/372 (81%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 EVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+ + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 304 TMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|A Chain A, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|A Chain A, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
Length = 375
Score = 531 bits (1367), Expect = e-151, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 304/372 (81%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+AEREIVRDIKE+L+YVA+DF++E+A + SS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
Length = 375
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 243/372 (65%), Positives = 302/372 (81%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+AEREIVRDIKE+L+YVA+DF+ E+ KESS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYKESSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K +Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKHEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin
And The Last Poly-Pro Of Human Vasp
pdb|3CIP|A Chain A, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 375
Score = 528 bits (1359), Expect = e-150, Method: Compositional matrix adjust.
Identities = 242/372 (65%), Positives = 302/372 (81%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+AEREIVRDIKE+L+YVA+DF+ E+ + SS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin
pdb|2OAN|B Chain B, Structure Of Oxidized Beta-Actin
pdb|2OAN|C Chain C, Structure Of Oxidized Beta-Actin
pdb|2OAN|D Chain D, Structure Of Oxidized Beta-Actin
Length = 375
Score = 526 bits (1356), Expect = e-150, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESXGIHETTFNSIMKCDVDIRKDLYANTVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 370
Score = 526 bits (1355), Expect = e-150, Method: Compositional matrix adjust.
Identities = 238/369 (64%), Positives = 300/369 (81%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 2 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 61
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 62 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 121
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 122 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 181
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 182 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 241
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 242 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 301
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y E+G
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 361
Query: 371 PSVVHMKCF 379
PS+VH KCF
Sbjct: 362 PSIVHRKCF 370
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1IJJ|B Chain B, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1P8Z|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
pdb|1SQK|A Chain A, Crystal Structure Of Ciboulot In Complex With Skeletal
Actin
pdb|1RGI|A Chain A, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
pdb|3CJB|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
pdb|3B5U|A Chain A, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|B Chain B, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|C Chain C, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|D Chain D, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|E Chain E, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|F Chain F, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|G Chain G, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|H Chain H, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|I Chain I, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|J Chain J, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|K Chain K, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|L Chain L, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|M Chain M, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|N Chain N, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3DAW|A Chain A, Structure Of The Actin-Depolymerizing Factor Homology
Domain In Complex With Actin
pdb|2V51|B Chain B, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V51|D Chain D, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V52|B Chain B, Structure Of Mal-Rpel2 Complexed To G-Actin
pdb|2VYP|A Chain A, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|2VYP|B Chain B, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|3FFK|B Chain B, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|E Chain E, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|2YJE|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|D Chain D, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|E Chain E, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|3TU5|A Chain A, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
pdb|4EAH|D Chain D, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|H Chain H, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|G Chain G, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|F Chain F, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
Length = 377
Score = 526 bits (1355), Expect = e-150, Method: Compositional matrix adjust.
Identities = 239/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 6 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 125
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 126 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 185
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 186 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 245
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 246 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 305
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 306 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 365
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 366 EAGPSIVHRKCF 377
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1V|B Chain B, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1Z|A Chain A, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|B Chain B, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|C Chain C, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|D Chain D, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|E Chain E, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|F Chain F, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
Length = 376
Score = 526 bits (1355), Expect = e-150, Method: Compositional matrix adjust.
Identities = 239/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 5 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 65 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 124
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 125 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 184
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 185 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 244
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 245 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 304
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 364
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 365 EAGPSIVHRKCF 376
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In
Complex With Skeletal Actin
pdb|1M8Q|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1H1V|A Chain A, Gelsolin G4-G6ACTIN COMPLEX
pdb|1RDW|X Chain X, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|A Chain A, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|B Chain B, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|2A5X|A Chain A, Crystal Structure Of A Cross-Linked Actin Dimer
pdb|2ASM|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
A
pdb|2ASP|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
C
pdb|2FF3|B Chain B, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|A Chain A, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
pdb|2Q1N|A Chain A, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q1N|B Chain B, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q31|A Chain A, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q31|B Chain B, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q36|A Chain A, Actin Dimer Cross-Linked Between Residues 191 And 374 And
Complexed With Kabiramide C
pdb|2Q0R|A Chain A, Structure Of Pectenotoxin-2 Bound To Actin
pdb|3BUZ|B Chain B, Crystal Structure Of Ia-Btad-Actin Complex
pdb|2Y83|O Chain O, Actin Filament Pointed End
pdb|2Y83|P Chain P, Actin Filament Pointed End
pdb|2Y83|Q Chain Q, Actin Filament Pointed End
pdb|2Y83|R Chain R, Actin Filament Pointed End
pdb|2Y83|S Chain S, Actin Filament Pointed End
pdb|2Y83|T Chain T, Actin Filament Pointed End
pdb|3TPQ|A Chain A, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|B Chain B, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|C Chain C, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|D Chain D, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|E Chain E, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3SJH|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A
pdb|3U8X|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U8X|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9Z|A Chain A, Crystal Structure Between Actin And A Protein Construct
Containing The First Beta-Thymosin Domain Of Drosophila
Ciboulot (Residues 2-58) With The Three Mutations
N26dQ27KD28S
pdb|3UE5|A Chain A, Ecp-Cleaved Actin In Complex With Spir Domain D
pdb|4GY2|B Chain B, Crystal Structure Of Apo-ia-actin Complex
pdb|4H0T|B Chain B, Crystal Structure Of Ia-adpr-actin Complex
pdb|4H0V|B Chain B, Crystal Structure Of Nad+-ia(e378s)-actin Complex
pdb|4H0X|B Chain B, Crystal Structure Of Nad+-ia(e380a)-actin Complex
pdb|4H0Y|B Chain B, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 375
Score = 526 bits (1355), Expect = e-150, Method: Compositional matrix adjust.
Identities = 239/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 363
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 364 EAGPSIVHRKCF 375
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form
pdb|2GWK|A Chain A, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
pdb|2GWK|B Chain B, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
Length = 371
Score = 526 bits (1355), Expect = e-150, Method: Compositional matrix adjust.
Identities = 238/369 (64%), Positives = 300/369 (81%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 3 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 62
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 63 LKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 122
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 123 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 182
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 183 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 242
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 243 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 302
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y E+G
Sbjct: 303 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 362
Query: 371 PSVVHMKCF 379
PS+VH KCF
Sbjct: 363 PSIVHRKCF 371
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4
A
Length = 375
Score = 526 bits (1354), Expect = e-150, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex
pdb|3LUE|A Chain A, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|B Chain B, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|C Chain C, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|D Chain D, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|E Chain E, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|F Chain F, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|G Chain G, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|H Chain H, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|I Chain I, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|J Chain J, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3J0S|A Chain A, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|B Chain B, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|C Chain C, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|D Chain D, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|E Chain E, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|F Chain F, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|G Chain G, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|H Chain H, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|I Chain I, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|J Chain J, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|K Chain K, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|L Chain L, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3UB5|A Chain A, Profilin:actin With A Wide Open Nucleotide Cleft
Length = 374
Score = 526 bits (1354), Expect = e-150, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 3 DIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 62
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 63 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 122
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 123 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 182
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+A + SS L+K YELP
Sbjct: 183 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 242
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 243 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGT 302
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 303 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 362
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 363 ESGPSIVHRKCF 374
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|P Chain P, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Q Chain Q, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|R Chain R, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|S Chain S, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|T Chain T, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|U Chain U, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|V Chain V, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|W Chain W, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|X Chain X, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Y Chain Y, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Z Chain Z, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
Length = 376
Score = 526 bits (1354), Expect = e-150, Method: Compositional matrix adjust.
Identities = 239/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 5 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 65 ILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 124
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 125 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 184
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 185 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 244
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 245 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 304
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 364
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 365 EAGPSIVHRKCF 376
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C
pdb|1QZ6|A Chain A, Structure Of Rabbit Actin In Complex With Jaspisamide A
pdb|1S22|A Chain A, Absolute Stereochemistry Of Ulapualide A
pdb|1Y64|A Chain A, Bni1p Formin Homology 2 Domain Complexed With Atp-actin
pdb|1YXQ|A Chain A, Crystal Structure Of Actin In Complex With Swinholide A
pdb|1YXQ|B Chain B, Crystal Structure Of Actin In Complex With Swinholide A
pdb|2A3Z|A Chain A, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
I
pdb|2A40|A Chain A, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A40|D Chain D, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A41|A Chain A, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
I
pdb|2A42|A Chain A, Actin-Dnase I Complex
pdb|2ASO|A Chain A, Structure Of Rabbit Actin In Complex With Sphinxolide B
pdb|1WUA|A Chain A, The Structure Of Aplyronine A-Actin Complex
pdb|2FXU|A Chain A, X-Ray Structure Of Bistramide A- Actin Complex At 1.35 A
Resolution.
pdb|2D1K|A Chain A, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
I
pdb|2HMP|A Chain A, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2HMP|B Chain B, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2Q0U|A Chain A, Structure Of Pectenotoxin-2 And Latrunculin B Bound To
Actin
pdb|1J6Z|A Chain A, Uncomplexed Actin
pdb|1LOT|B Chain B, Crystal Structure Of The Complex Of Actin With Vitamin
D-Binding Protein
pdb|1MA9|B Chain B, Crystal Structure Of The Complex Of Human Vitamin D
Binding Protein And Rabbit Muscle Actin
pdb|1NWK|A Chain A, Crystal Structure Of Monomeric Actin In The Atp State
pdb|2Q97|A Chain A, Complex Of Mammalian Actin With Toxofilin From Toxoplasma
Gondii
pdb|2PAV|A Chain A, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2VCP|A Chain A, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2VCP|B Chain B, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2ZWH|A Chain A, Model For The F-Actin Structure
pdb|3HBT|A Chain A, The Structure Of Native G-Actin
pdb|3M3N|A Chain A, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M3N|B Chain B, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M1F|A Chain A, Crosslinked Complex Of Actin With First W Domain Of Vibrio
Parahaemolyticus Vopl
pdb|3MFP|A Chain A, Atomic Model Of F-Actin Based On A 6.6 Angstrom Resolution
Cryoem Map
pdb|4A7F|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7N|A Chain A, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|B Chain B, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|C Chain C, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|D Chain D, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|E Chain E, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4H03|B Chain B, Crystal Structure Of Nad+-ia-actin Complex
Length = 375
Score = 526 bits (1354), Expect = e-150, Method: Compositional matrix adjust.
Identities = 239/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 363
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 364 EAGPSIVHRKCF 375
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|A Chain A, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
pdb|1MDU|B Chain B, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|E Chain E, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|2PBD|A Chain A, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
Length = 377
Score = 526 bits (1354), Expect = e-149, Method: Compositional matrix adjust.
Identities = 239/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 6 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 66 ILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 125
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 126 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 185
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 186 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 245
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 246 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 305
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 306 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 365
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 366 EAGPSIVHRKCF 377
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin
pdb|1HLU|A Chain A, Structure Of Bovine Beta-Actin-Profilin Complex With Actin
Bound Atp Phosphates Solvent Accessible
Length = 375
Score = 526 bits (1354), Expect = e-149, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 375
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+AEREIVRDIKE+L+YVA+DF+ E+ + SS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 375
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 301/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTG+V+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVIT+G +F+ PE +F PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 244 DGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
Length = 375
Score = 524 bits (1350), Expect = e-149, Method: Compositional matrix adjust.
Identities = 241/372 (64%), Positives = 300/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+AEREIVRDIKE+L+YVA+DF+ E+ SS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K +Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKHEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex
Length = 374
Score = 523 bits (1348), Expect = e-149, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 300/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 3 ETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 62
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 63 ILTLKYPIEXGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 122
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 123 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 182
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 183 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 242
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 243 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGT 302
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 303 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 362
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 363 EAGPSIVHRKCF 374
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
pdb|1LCU|B Chain B, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
Length = 371
Score = 520 bits (1339), Expect = e-148, Method: Compositional matrix adjust.
Identities = 236/369 (63%), Positives = 298/369 (80%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+ +GQ D Y GDEAQ+KRG+L
Sbjct: 3 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRGILT 62
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 63 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 122
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 123 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 182
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 183 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 242
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 243 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 302
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y E+G
Sbjct: 303 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 362
Query: 371 PSVVHMKCF 379
PS+VH KCF
Sbjct: 363 PSIVHRKCF 371
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide
pdb|3M6G|B Chain B, Crystal Structure Of Actin In Complex With Lobophorolide
Length = 371
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 236/368 (64%), Positives = 298/368 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 363
Query: 368 ESGPSVVH 375
E+GPS+VH
Sbjct: 364 EAGPSIVH 371
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound
State
pdb|2HF4|A Chain A, Crystal Structure Of Monomeric Actin In Its Atp-Bound
State
pdb|3MN7|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN9|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MMV|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|F Chain F, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|K Chain K, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 374
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 298/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 3 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 62
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 63 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 122
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIV+DSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 123 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 182
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+ EREIVRDIKE+L YVA+DF++E+A + SS L+K YEL
Sbjct: 183 DLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELK 242
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 243 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGT 302
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 303 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 362
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 363 ESGPSIVHRKCF 374
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EKU|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EL2|A Chain A, Crystal Structure Of Monomeric Actin Bound To Ca-Atp
Length = 375
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 298/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIV+DSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY FTT+ EREIVRDIKE+L YVA+DF++E+A + SS L+K YEL
Sbjct: 184 DLTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELK 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E G HE +IM+ D+D+R+++Y N VLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 372
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 236/368 (64%), Positives = 298/368 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 64 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 184 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 363
Query: 368 ESGPSVVH 375
E+GPS+VH
Sbjct: 364 EAGPSIVH 371
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|C Chain C, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 298/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE LNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAALNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+A IVRDIKE+L+YVA+DF+ E+ + SS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex
Length = 373
Score = 518 bits (1334), Expect = e-147, Method: Compositional matrix adjust.
Identities = 236/368 (64%), Positives = 298/368 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 5 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 65 ILTLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 124
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 125 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 184
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 185 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 244
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 245 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 304
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 364
Query: 368 ESGPSVVH 375
E+GPS+VH
Sbjct: 365 EAGPSIVH 372
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|C Chain C, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 517 bits (1332), Expect = e-147, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 298/372 (80%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE LNPK NREKM +IM
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAILNPKANREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 124 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+A IVRDIKE+L+YVA+DF+ E+ + SS L+K YELP
Sbjct: 184 DLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 244 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 304 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHRKCF 375
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|M Chain M, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 237/364 (65%), Positives = 296/364 (81%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 2 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 61
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IMFE
Sbjct: 62 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 121
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F PA YVAIQAVLSLYASGRTTGIVMDSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 122 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 181
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY FTT+AEREIVRDIKE+L YVA+DF++E+A + SS L+K YELPDGQ
Sbjct: 182 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ 241
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N VLSGGT++
Sbjct: 242 VITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMY 301
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+K++Y ESG
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESG 361
Query: 371 PSVV 374
PS+V
Sbjct: 362 PSIV 365
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|H Chain H, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|J Chain J, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|K Chain K, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|N Chain N, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 234/364 (64%), Positives = 296/364 (81%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 2 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 61
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 62 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 121
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 122 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 181
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 182 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 241
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 242 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 301
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y E+G
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 361
Query: 371 PSVV 374
PS+V
Sbjct: 362 PSIV 365
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
Length = 375
Score = 513 bits (1321), Expect = e-146, Method: Compositional matrix adjust.
Identities = 231/372 (62%), Positives = 303/372 (81%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE P+NPK NREKM +IM
Sbjct: 64 ILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YV+IQAVLSLY+SGRTTGIV+DSG+GVTHVVPIY G++LPHAI R++LAG+
Sbjct: 124 FETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL L++ GY F+T+AEREIVRDIKE+L YVA+DF++E+ + +SS ++K YELP
Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +GLE+ G + +IM+ D+DVR+E+YGN+V+SGGT
Sbjct: 244 DGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ +R+ KE+ LA + V+++APP+R +SVWIGGSILASL+TFQQMWI+K++Y
Sbjct: 304 TMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHHKCF 375
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
Length = 368
Score = 511 bits (1317), Expect = e-145, Method: Compositional matrix adjust.
Identities = 238/372 (63%), Positives = 296/372 (79%), Gaps = 7/372 (1%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +++V D+GSG K GFAGDDAP VFPS++G+PR+ KD Y GDEAQ+KRG
Sbjct: 4 DVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTG-------KDSYVGDEAQSKRG 56
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE PLNPK NREKM +IM
Sbjct: 57 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 116
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F PA YVAIQAVLSLYASGRTTGIVMDSG+GV+H VPIYEGYALPHAI RL+LAG+
Sbjct: 117 FETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGR 176
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDY+ LT+ GY FTT+AEREIVRDIKE+L+YVA+DF+ E+ + SS L+K YELP
Sbjct: 177 DLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELP 236
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++YGNVVLSGGT
Sbjct: 237 DGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGT 296
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KEL LA + ++++APP+R +SVWIGGSILASLSTFQQMWI+KE+Y
Sbjct: 297 TMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYD 356
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 357 ESGPSIVHRKCF 368
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1
Length = 375
Score = 511 bits (1316), Expect = e-145, Method: Compositional matrix adjust.
Identities = 230/372 (61%), Positives = 302/372 (81%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG
Sbjct: 4 EVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRG 63
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE P+NPK NREKM +IM
Sbjct: 64 ILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIM 123
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YV+IQAVLSLY+SGRTTGIV+DSG+G THVVPIY G++LPHAI R++LAG+
Sbjct: 124 FETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGR 183
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL L++ GY F+T+AEREIVRDIKE+L YVA+DF++E+ + +SS ++K YELP
Sbjct: 184 DLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELP 243
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +GLE+ G + +IM+ D+DVR+E+YGN+V+SGGT
Sbjct: 244 DGQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGT 303
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ +R+ KE+ LA + V+++APP+R +SVWIGGSILASL+TFQQMWI+K++Y
Sbjct: 304 TMFPGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYD 363
Query: 368 ESGPSVVHMKCF 379
ESGPS+VH KCF
Sbjct: 364 ESGPSIVHHKCF 375
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 364
Score = 510 bits (1314), Expect = e-145, Method: Compositional matrix adjust.
Identities = 234/364 (64%), Positives = 296/364 (81%), Gaps = 1/364 (0%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 2 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 61
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 62 LKYPI-EGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 120
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 121 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 180
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 181 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 240
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 241 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 300
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y E+G
Sbjct: 301 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAG 360
Query: 371 PSVV 374
PS+V
Sbjct: 361 PSIV 364
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|I Chain I, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 226/364 (62%), Positives = 298/364 (81%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 2 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILT 61
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE P+NPK NREKM +IMFE
Sbjct: 62 LRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 121
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YV+IQAVLSLY+SGRTTGIV+DSG+GVTHVVPIY G++LPHAI R++LAG+DLT
Sbjct: 122 FNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRDLT 181
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL L++ GY F+T+AEREIVRDIKE+L YVA+DF++E+ + +SS ++K YELPDGQ
Sbjct: 182 DYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQ 241
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +GLE+ G + +IM+ D+DVR+E+YGN+V+SGGT++
Sbjct: 242 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 301
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ +R+ KE+ LA + V+++APP+R +SVWIGGSILASL+TFQQMWI+K++Y ESG
Sbjct: 302 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESG 361
Query: 371 PSVV 374
PS+V
Sbjct: 362 PSIV 365
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 230/358 (64%), Positives = 290/358 (81%), Gaps = 1/358 (0%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 1 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 60
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 61 LKYPI-EGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 119
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 120 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 179
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 180 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 239
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 240 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 299
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYME 368
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y E
Sbjct: 300 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDE 357
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 229/356 (64%), Positives = 289/356 (81%), Gaps = 1/356 (0%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++VCD+GSG VK GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 3 ALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 62
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IMFE
Sbjct: 63 LKYPI-EGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFET 121
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+DLT
Sbjct: 122 FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLT 181
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELPDGQ
Sbjct: 182 DYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 241
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT++
Sbjct: 242 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMY 301
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDY 366
PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 302 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEY 357
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|G Chain G, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 225/364 (61%), Positives = 297/364 (81%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRGVLR 70
++V D+GSG K GFAGDDAP VFPS++G+PR++ M+G+GQKD Y GDEAQ+KRG+L
Sbjct: 2 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGILT 61
Query: 71 LSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIMFEG 130
L +P+ G+V +WD ME++W H F ELRV EEHPVLLTE P+NPK NREKM +IMFE
Sbjct: 62 LRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQIMFET 121
Query: 131 FEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLT 190
F +PA YV+IQAVLSLY+SGRTTGIV+DSG+G THVVPIY G++LPHAI R++LAG+DLT
Sbjct: 122 FNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRDLT 181
Query: 191 DYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELPDGQ 250
DYL L++ GY F+T+AEREIVRDIKE+L YVA+DF++E+ + +SS ++K YELPDGQ
Sbjct: 182 DYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPDGQ 241
Query: 251 VITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLI 310
VITIG +F+ PE LF PS +GLE+ G + +IM+ D+DVR+E+YGN+V+SGGT++
Sbjct: 242 VITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTTMF 301
Query: 311 PGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
PG+ +R+ KE+ LA + V+++APP+R +SVWIGGSILASL+TFQQMWI+K++Y ESG
Sbjct: 302 PGIAERMQKEITALAPSSMKVKIIAPPERKYSVWIGGSILASLTTFQQMWISKQEYDESG 361
Query: 371 PSVV 374
PS+V
Sbjct: 362 PSIV 365
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 359
Score = 496 bits (1276), Expect = e-140, Method: Compositional matrix adjust.
Identities = 230/372 (61%), Positives = 288/372 (77%), Gaps = 16/372 (4%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++VCD+GSG VK GFAGDDAP VFPS++G+ GDEAQ+KRG
Sbjct: 4 ETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGR----------------VGDEAQSKRG 47
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREKMVEIM 127
+L L +P+ G++ +WD ME++W H F ELRV EEHP LLTE PLNPK NREKM +IM
Sbjct: 48 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIM 107
Query: 128 FEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAGK 187
FE F +PA YVAIQAVLSLYASGRTTGIV+DSG+GVTH VPIYEGYALPHAI RL+LAG+
Sbjct: 108 FETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 167
Query: 188 DLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYELP 247
DLTDYL LT+ GY F T+AEREIVRDIKE+L YVA+DF+ E+A + SS L+K YELP
Sbjct: 168 DLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP 227
Query: 248 DGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGT 307
DGQVITIG +F+ PE LF PS +G+E+ G HE +IM+ D+D+R+++Y N V+SGGT
Sbjct: 228 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 287
Query: 308 SLIPGLPDRLAKELCNLASPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYM 367
++ PG+ DR+ KE+ LA + ++++APP+R +SVWIGGSILASLSTFQQMWITK++Y
Sbjct: 288 TMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYD 347
Query: 368 ESGPSVVHMKCF 379
E+GPS+VH KCF
Sbjct: 348 EAGPSIVHRKCF 359
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
Length = 394
Score = 337 bits (864), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 165/380 (43%), Positives = 246/380 (64%), Gaps = 15/380 (3%)
Query: 10 RSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQP--RNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +VCD+G+G VK G+AG + P +FPSL+G+P R+ + I KD+ GDEA R
Sbjct: 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPSLVGRPIIRSTTKVGNIEIKDLMVGDEASELRS 66
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKE-LRVTIEEHPVLLTEPPLNPKINREKMVEI 126
+L +++P+ G+VR+WD M+ LW++ F E L + +LLTEPP+NP NREK+VE+
Sbjct: 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEV 126
Query: 127 MFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAG 186
MFE ++ YVAIQAVL+LYA G TG+V+DSG+GVTH+ P+YEG++LPH +RL++AG
Sbjct: 127 MFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAG 186
Query: 187 KDLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYEL 246
+D+T YL L GY F SA+ E VR IKE+L YV + ++E ++ E++ L + Y L
Sbjct: 187 RDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTL 246
Query: 247 PDGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGG 306
PDG++I +G +F+ PE LF P + +E G E+L I +D+D R E Y ++VLSGG
Sbjct: 247 PDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGG 306
Query: 307 TSLIPGLPDRLAKELCNLASPGV-----------GVRVVAPPQRLHSVWIGGSILAS-LS 354
+++ PGLP RL +EL L V +R+ PP+R H V++GG++LA +
Sbjct: 307 STMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMK 366
Query: 355 TFQQMWITKEDYMESGPSVV 374
W+T+++Y E G V+
Sbjct: 367 DKDNFWMTRQEYQEKGVRVL 386
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9L|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|B Chain B, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|B Chain B, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|B Chain B, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|B Chain B, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|B Chain B, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 394
Score = 336 bits (861), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 246/380 (64%), Gaps = 15/380 (3%)
Query: 10 RSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQP--RNKNSMIGIGQKDMYFGDEAQAKRG 67
+ +VCD+G+G VK G+AG + P +FP+L+G+P R+ + I KD+ GDEA R
Sbjct: 7 KVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS 66
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKE-LRVTIEEHPVLLTEPPLNPKINREKMVEI 126
+L +++P+ G+VR+WD M+ LW++ F E L + +LLTEPP+NP NREK+VE+
Sbjct: 67 MLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEV 126
Query: 127 MFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAG 186
MFE ++ YVAIQAVL+LYA G TG+V+DSG+GVTH+ P+YEG++LPH +RL++AG
Sbjct: 127 MFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAG 186
Query: 187 KDLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYEL 246
+D+T YL L GY F SA+ E VR IKE+L YV + ++E ++ E++ L + Y L
Sbjct: 187 RDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTL 246
Query: 247 PDGQVITIGAAQFKGPEVLFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGG 306
PDG++I +G +F+ PE LF P + +E G E+L I +D+D R E Y ++VLSGG
Sbjct: 247 PDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGG 306
Query: 307 TSLIPGLPDRLAKELCNLASPGV-----------GVRVVAPPQRLHSVWIGGSILAS-LS 354
+++ PGLP RL +EL L V +R+ PP+R H V++GG++LA +
Sbjct: 307 STMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMK 366
Query: 355 TFQQMWITKEDYMESGPSVV 374
W+T+++Y E G V+
Sbjct: 367 DKDNFWMTRQEYQEKGVRVL 386
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9K|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
pdb|2P9L|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|A Chain A, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|A Chain A, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|A Chain A, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|A Chain A, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|A Chain A, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 418
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 145/404 (35%), Positives = 206/404 (50%), Gaps = 42/404 (10%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLI--------GQPRNKNSMIGIGQKDMYFGDEA 62
+ V D G+G K G+AG+ P + PS I G + M G+ D + GDEA
Sbjct: 7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEA 66
Query: 63 QAKRGVLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINREK 122
++ P+ G+V DWD MER E + K LR E+H LLTEPPLN NRE
Sbjct: 67 -IEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREY 125
Query: 123 MVEIMFEGFEIPATYVAIQAVLSLYASGRT--------TGIVMDSGEGVTHVVPIYEGYA 174
EIMFE F +P Y+A+QAVL+L AS + TG V+DSG+GVTHV+P+ EGY
Sbjct: 126 TAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYV 185
Query: 175 LPHAIQRLELAGKDLTDYLTTNLTKDGYI-FTTSAEREIVRDIKERLSYVAMDFQKEL-A 232
+ I+ + +AG+D+T Y L +D + E + +KER SYV D KE
Sbjct: 186 IGSCIKHIPIAGRDIT-YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNK 244
Query: 233 MSKESSQLDKQYELPDG-----QVITIGAAQFKGPEVLFDPSRMGLE-TEGAHEILVRAI 286
+ S+ KQY + I +G +F GPE+ F P + T+ E++ I
Sbjct: 245 YDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVI 304
Query: 287 MRSDMDVRREMYGNVVLSGGTSLIPGLPDRLAKEL----------------CNLASPGVG 330
+DVRR +Y N+VLSGG+++ RL ++L L +
Sbjct: 305 QNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPID 364
Query: 331 VRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESGPSVV 374
V+V+ + ++VW GGS+LAS F Q+ TK+DY E GPS+
Sbjct: 365 VQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSIC 408
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
pdb|3DWL|B Chain B, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
Length = 427
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/416 (34%), Positives = 210/416 (50%), Gaps = 59/416 (14%)
Query: 12 IVCDSGSGSVKTGFAGDDAPCVVFPSLIG-QPRNKNSMIGIGQK---------------- 54
I+ D+G+G K G+AG+DAP VFP++I + +S + K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKR 67
Query: 55 -----DMYFGDEAQAKRGV-LRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEHPVL 108
D + G++A K L +P+ G + +WD MER W+ K LR E+H L
Sbjct: 68 ATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFL 127
Query: 109 LTEPPLNPKINREKMVEIMFEGFEIPATYVAIQAVLSLYASGRT--------TGIVMDSG 160
LTEPPLNP NRE EIMFE F Y+A+QAVL+L AS + TG V+DSG
Sbjct: 128 LTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSG 187
Query: 161 EGVTHVVPIYEGYALPHAIQRLELAGKDLTDYLTTNLTKDGYIFTTS---AEREIVRDIK 217
+GVTH++P+ EGY + +I+ + LAG+D+T Y +L +D +S AER IK
Sbjct: 188 DGVTHIIPVAEGYVIGSSIKTMPLAGRDVT-YFVQSLLRDRNEPDSSLKTAER-----IK 241
Query: 218 ERLSYVAMDFQKELA-MSKESSQ-LDKQYELPDGQVITI--GAAQFKGPEVLFDPSRMGL 273
E YV D KE + +E + L E G TI G +F PE+ F+P
Sbjct: 242 EECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASS 301
Query: 274 E-TEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLIPGLPDRLAKELCNLA------- 325
+ E++ + S +DVR+ +Y N+VLSGG++L +RL ++L +
Sbjct: 302 DFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRS 361
Query: 326 -------SPGVGVRVVAPPQRLHSVWIGGSILASLSTFQQMWITKEDYMESGPSVV 374
S GV V V++ ++ ++VW GGS+LA F TK DY E G S+
Sbjct: 362 EMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFGSYCHTKADYEEYGASIA 417
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|B Chain B, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|C Chain C, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|D Chain D, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
Length = 498
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 8 EFRSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFGDEAQAKRG 67
E ++V D GS + G++G D P + PS+ G+ G K ++ R
Sbjct: 22 EVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGK-----YTADEGNKKIFSEQSIGIPRK 76
Query: 68 VLRLSHPVNRGMVRDWDAMERLWEHIFDKELRVTIEEH-PVLLTEPPLNPKINREKMVEI 126
L + G+V DWD + W+ EL + P LLTEP N NR+K +E+
Sbjct: 77 DYELKPIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEV 136
Query: 127 MFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELAG 186
+ EG + A Y+A + +A+GR +V+D G V PI +G L + +R +AG
Sbjct: 137 LLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRRNFIAG 196
Query: 187 K 187
K
Sbjct: 197 K 197
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 268 PSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLIPGLPDRLAKELCNLASP 327
P + E G +++ +IM SD+D+R + NVVL+GGTS IPGL DRL EL N P
Sbjct: 384 PPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTEL-NKILP 442
Query: 328 GVGVRVVAPP---QRLHSVWIGGSILASLSTFQQMWITKEDYMESG 370
+ R++ +R + W+GGSIL SL TF Q+W+ K++Y E G
Sbjct: 443 SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEVG 488
>pdb|4I6M|A Chain A, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 477
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 96/192 (50%), Gaps = 15/192 (7%)
Query: 10 RSIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPRNKNSMIGIGQKDMYFG-----DEAQA 64
+ +V +GS GF+ + P + PS + ++ G+ + FG D A
Sbjct: 6 KCVVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEG-----GEAEFIFGTYNXIDAAAE 60
Query: 65 KRGVLRLSHPVN-RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR--- 120
KR + V+ +G+ +WDA+E W +++D +L+V+ EE P+++T P N K +
Sbjct: 61 KRNGDEVYTLVDSQGLPYNWDALEXQWRYLYDTQLKVSPEELPLVITXPATNGKPDXAIL 120
Query: 121 EKMVEIMFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQ 180
E+ E+ F+ +P + I+ + + G+++ V+D G +V PI +G + +A+
Sbjct: 121 ERYYELAFDKLNVPVFQIVIEPLAIALSXGKSSAFVIDIGASGCNVTPIIDGIVVKNAVV 180
Query: 181 RLELAGKDLTDY 192
R + G D D+
Sbjct: 181 RSKFGG-DFLDF 191
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 300 NVVLSGGTSLIPGLPDRLAKELCNLASPGVGVRVVAPP---QRLHSVWIGGSILASLSTF 356
NV+++G TSLI G R+ KEL ++ P + A R W+G A+L ++
Sbjct: 391 NVIITGSTSLIEGXEQRIIKEL-SIRFPQYKLTTFANQVXXDRKIQGWLGALTXANLPSW 449
Query: 357 Q-QMWITKEDY 366
W +KEDY
Sbjct: 450 SLGKWYSKEDY 460
>pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 439
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 114/297 (38%), Gaps = 45/297 (15%)
Query: 53 QKDMYFGDEAQAKRGVLRLSHPVNRGMVRDWDAMERLWEHIF-----------DKELRVT 101
++D + + K L P+ G + D A + IF
Sbjct: 46 RQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAE 105
Query: 102 IEEHPVLLTEPPLNPKINREKMVEIMFEGFEI------PATYVAIQAVLSLYASGRTTGI 155
+ P+LL + + E + + +FE EI PA+ A + +SL
Sbjct: 106 LSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATYSXISL-----QNCC 160
Query: 156 VMDSGEGVTHVVPIYEGYALPHAIQRLELAGKDLTDYLTTNLTK--DGYI--FTTSAERE 211
++D G T ++PI + L H + + G+ + D L L + D I S E
Sbjct: 161 IIDVGTHHTDIIPIVDYAQLDHLVSSIPXGGQSINDSLKKLLPQWDDDQIESLKKSPIFE 220
Query: 212 IVRDIKERLSYVAMDFQKELAMSKESSQLDKQYEL-----PDGQVITIGAAQFKGPEVLF 266
++ D ++LS + DF E E + + E G I +G +F+G L
Sbjct: 221 VLSDDAKKLS--SFDFGNENEDEDEGTLKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLI 278
Query: 267 D--PSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLIPGLPDRLAKEL 321
+R+GL + D++ + ++ N+++ GGT+ I G + L +L
Sbjct: 279 KNISNRVGLTLDNI----------DDINKAKAVWENIIIVGGTTSISGFKEALLGQL 325
>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State
Length = 593
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 12/114 (10%)
Query: 265 LFDPSRMGLETEGAHEILVRAIMRSDMDVRREMYGNVVLSGGTSLIPGLPDRLAKELCNL 324
LF+ +GL+ H I SD D +++MY ++++ GG + + L + N
Sbjct: 472 LFEGKALGLDKAILHSI---DCCSSD-DTKKKMYSSILVVGGGLMFHKAQEFLQHRILNK 527
Query: 325 ASPGV-----GVRVVAPPQRLHS---VWIGGSILASLSTFQQMWITKEDYMESG 370
P V V+ P+ + W GG++LA L T Q++WI + ++ G
Sbjct: 528 MPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIYQREWQRFG 581
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 90/204 (44%), Gaps = 27/204 (13%)
Query: 86 MERLWEHIFDKELRVTIEE---HPVLLTEPPLNPKINREKMVEIMFEGFEIPATYVAIQA 142
+E +W H K L + +++ + +L P + K + +++V ++ V ++
Sbjct: 177 IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQES 236
Query: 143 VLSLYASGRTTGIVMDSGEGVTHVVPIYEGYALPHAIQRLELA--GKDLTDYLTTNLTKD 200
V + Y SG ++ ++D G+ T V + +G + H RL LA G D++ + +
Sbjct: 237 VCATYGSGLSSTCIVDVGDQKTSVCCVEDGVS--HRNTRLCLAYGGSDVSRCFYWLMQRA 294
Query: 201 GYIF-----TTSAEREIVRDIKERLSYVAMDFQKELAMSKESSQLDKQYEL--PDGQVI- 252
G+ + T + +++ +KE ++ D S D ++++ PD +
Sbjct: 295 GFPYRECQLTNKMDCLLLQHLKETFCHLDQDI---------SGLQDHEFQIRHPDSPALL 345
Query: 253 ---TIGAAQFKGPEVLFDPSRMGL 273
+G + + P LF P+ G+
Sbjct: 346 YQFRLGDEKLQAPMALFYPATFGI 369
>pdb|4AM6|A Chain A, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM6|B Chain B, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM7|A Chain A, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
pdb|4AM7|B Chain B, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
Length = 655
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 67 GVLRLSHPVNRGMVRDWDAMERLWEHIFDKE-LRVT---IEEHPVLLTEPPLNPKINREK 122
G + P + + + +L EH + E L V ++ V+L P + K + E
Sbjct: 180 GSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVET 239
Query: 123 MVEIMFEGFEIPATYVAIQAVLSLYASG-RTTGIVMDSGEGVTHVVPIYEGYALPHAIQR 181
+ ++ + A + +++ + Y +G T+ V++ G T + + EG L H+
Sbjct: 240 FIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAIT 299
Query: 182 LELAGKDLT 190
L+ G D+T
Sbjct: 300 LDYGGDDIT 308
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Query: 331 VRVVAPPQRLHS---VWIGGSILASLSTFQQMWITKEDYMESGPSVVHMKC 378
V ++ PP+ ++ +W G S+LA + ++++IT D+ G ++ KC
Sbjct: 601 VSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKC 651
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 11 SIVCDSGSGSVKTGFAGDDAPCVVFPSLIGQPR 43
+IV GS S+K GF DD P VV P+ + P+
Sbjct: 42 TIVIHPGSNSIKIGFPKDDHPVVV-PNCVAVPK 73
>pdb|2BNJ|A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes
Arabinose Decorations Of Xylan As Significant Substrate
Specificity Determinants
Length = 303
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 77 RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR--EKMVEIMFEGFEI- 133
+G +R WD + + D LR T+ + + P+ + R + ++ + +
Sbjct: 120 KGKIRAWDVVNEAFNE--DGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLD 177
Query: 134 PATYVAIQAVLSLYASGRTTGIVMD-----------SGEGVTHVVPIYEGYALPH-AIQR 181
A+Y QA+++ R G+ +D G GV +P+ P AI
Sbjct: 178 SASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGAGVLQALPLLASAGTPEVAITE 237
Query: 182 LELAGKDLTDYLT 194
L++AG TDY+
Sbjct: 238 LDVAGASPTDYVN 250
>pdb|1K6A|A Chain A, Structural Studies On The Mobility In The Active Site Of
The Thermoascus Aurantiacus Xylanase I
Length = 303
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 77 RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR--EKMVEIMFEGFEI- 133
+G +R WD + + D LR T+ + + P+ + R + ++ + +
Sbjct: 120 KGKIRAWDVVNEAFNE--DGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLD 177
Query: 134 PATYVAIQAVLSLYASGRTTGIVMD-----------SGEGVTHVVPIYEGYALPH-AIQR 181
A+Y QA+++ R G+ +D G GV +P+ P AI
Sbjct: 178 SASYPKTQAIVNRVKQWRAAGVPIDGIGSQTHLSAGQGAGVLQALPLLASAGTPEVAITE 237
Query: 182 LELAGKDLTDYLT 194
L++AG TDY+
Sbjct: 238 LDVAGASPTDYVN 250
>pdb|1GOK|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus-
Crystal Form Ii
pdb|1GOO|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus -
Cryocooled Glycerol Complex
pdb|1GOM|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus -
Crystal Form I
pdb|1GOR|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus-
Xylobiose Complex At 100 K
pdb|1GOQ|A Chain A, Thermostable Xylanase I From Thermoascus Aurantiacus-Room
Temperature Xylobiose Complex
Length = 303
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 77 RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR--EKMVEIMFEGFEI- 133
+G +R WD + + D LR T+ + + P+ + R + ++ + +
Sbjct: 120 KGKIRAWDVVNEAFNE--DGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLD 177
Query: 134 PATYVAIQAVLSLYASGRTTGIVMD-----------SGEGVTHVVPIYEGYALPH-AIQR 181
A+Y QA+++ R G+ +D G GV +P+ P AI
Sbjct: 178 SASYPKTQAIVNRVKQWRAAGVPIDGIGSQTHLSAGQGAGVLQALPLLASAGTPEVAITE 237
Query: 182 LELAGKDLTDYLT 194
L++AG TDY+
Sbjct: 238 LDVAGASPTDYVN 250
>pdb|3O2L|A Chain A, Crystal Structure Of An Inactive Kemp Elimination Design
Hg-1
Length = 317
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 17/133 (12%)
Query: 77 RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR--EKMVEIMFEGFEI- 133
+G +R WD + + D LR T+ + + P+ + R + ++ + +
Sbjct: 121 KGKIRAWDVVNEAFNE--DGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLD 178
Query: 134 PATYVAIQAVLSLYASGRTTGIVMD-----------SGEGVTHVVPIYEGYALPH-AIQR 181
A+Y QA+++ R G+ +D G GV +P+ P AI
Sbjct: 179 SASYPKTQAIVNRVKQWRAAGVPIDGIGSQTHLSAGQGAGVLQALPLLASAGTPEVAITE 238
Query: 182 LELAGKDLTDYLT 194
L +AG TDY+
Sbjct: 239 LNVAGASPTDYVN 251
>pdb|1I1W|A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable
Xylanase From Thermoascus Aurantiacus
pdb|1I1X|A Chain A, 1.11 A Atomic Resolution Structure Of A Thermostable
Xylanase From Thermoascus Aurantiacus
Length = 303
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 17/133 (12%)
Query: 77 RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR--EKMVEIMFEGFEI- 133
+G +R WD + + D LR T+ + + P+ + R + ++ + +
Sbjct: 120 KGKIRAWDVVNEAFNE--DGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLD 177
Query: 134 PATYVAIQAVLSLYASGRTTGIVMD-----------SGEGVTHVVPIYEGYALPH-AIQR 181
A+Y QA+++ R G+ +D G V +P+ P AI
Sbjct: 178 SASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQGASVLQALPLLASAGTPEVAITE 237
Query: 182 LELAGKDLTDYLT 194
L++AG TDY+
Sbjct: 238 LDVAGASSTDYVN 250
>pdb|3LO8|A Chain A, Crystal Structure Of The Oxidized Form Of Ferredoxin:nadp+
Reductase From Maize Root At 1.05 Angstroms
Length = 311
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 111 EPPLNPKINREKMVEIMFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTH----- 165
EPPLN +E AT V++++++ A G T IV+D G V +
Sbjct: 17 EPPLNTYKPKEPFT----------ATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQS 66
Query: 166 --VVPIYEGYALPHAIQRLELAGKDLTDY 192
V+P E P A Q + L T Y
Sbjct: 67 YGVIPPGENPKKPGAPQNVRLYSIASTRY 95
>pdb|1JB9|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms
Length = 316
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 111 EPPLNPKINREKMVEIMFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTH----- 165
EPPLN +E AT V++++++ A G T IV+D G V +
Sbjct: 22 EPPLNTYKPKEPFT----------ATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQS 71
Query: 166 --VVPIYEGYALPHAIQRLELAGKDLTDY 192
V+P E P A Q + L T Y
Sbjct: 72 YGVIPPGENPKKPGAPQNVRLYSIASTRY 100
>pdb|3LVB|A Chain A, Crystal Structure Of The Ferredoxin:nadp+ Reductase From
Maize Root At 1.7 Angstroms - Test Set Withheld
Length = 311
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 17/89 (19%)
Query: 111 EPPLNPKINREKMVEIMFEGFEIPATYVAIQAVLSLYASGRTTGIVMDSGEGVTH----- 165
EPPLN +E AT V++++++ A G T IV+D G V +
Sbjct: 17 EPPLNTYKPKEPFT----------ATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQS 66
Query: 166 --VVPIYEGYALPHAIQRLELAGKDLTDY 192
V+P E P A Q + L T Y
Sbjct: 67 YGVIPPGENPKKPGAPQNVRLYSIASTRY 95
>pdb|3NYD|A Chain A, Crystal Structure Of Kemp Eliminase Hg-2 Complexed With
Transition State Analog 5-Nitro Benzotriazole
pdb|3NYD|B Chain B, Crystal Structure Of Kemp Eliminase Hg-2 Complexed With
Transition State Analog 5-Nitro Benzotriazole
Length = 316
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 19/134 (14%)
Query: 77 RGMVRDWDAMERLWEHIFDKELRVTIEEHPVLLTEPPLNPKINR----EKMVEIMFEGFE 132
+G +R WD + + D LR T+ + + P+ + R + IM +
Sbjct: 120 KGKIRAWDVVGEAFNE--DGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYIMDYNLD 177
Query: 133 IPATYVAIQAVLSLYASGRTTGIVMD-----------SGEGVTHVVPIYEGYALPH-AIQ 180
A+Y QA+++ R G+ +D G GV +P+ P +I
Sbjct: 178 -SASYPKTQAIVNRVKQWRAAGVPIDGIGSQTHLSAGQGAGVLQALPLLASAGTPEVSIL 236
Query: 181 RLELAGKDLTDYLT 194
L++AG TDY+
Sbjct: 237 MLDVAGASPTDYVN 250
>pdb|3TJ1|A Chain A, Crystal Structure Of Rna Polymerase I Transcription
Initiation Factor Rrn3
pdb|3TJ1|B Chain B, Crystal Structure Of Rna Polymerase I Transcription
Initiation Factor Rrn3
Length = 649
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 132 EIPATYVAIQAVLSLYASGRTTGIVMDSGEGV-----------THVVPIYEGYALPHAIQ 180
E+ +I ++S + + T ++SGEGV THV+P Y ++ + +
Sbjct: 349 ELSTKLDSILTLVSTHVEEQVTPESLESGEGVGVFNTLTTLFKTHVLPTYYTRSIQYIMF 408
Query: 181 RLELAGKDLTDYLTTNLTKDGYIFTTSAEREIVRDIKERLSYVA 224
+ +L D L + +AE++I + ++ SY+A
Sbjct: 409 HVSQQQLELMDSFLVTLIDISFAVNEAAEKKI-KSLQYLGSYIA 451
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,676,127
Number of Sequences: 62578
Number of extensions: 501224
Number of successful extensions: 1776
Number of sequences better than 100.0: 68
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1693
Number of HSP's gapped (non-prelim): 74
length of query: 379
length of database: 14,973,337
effective HSP length: 100
effective length of query: 279
effective length of database: 8,715,537
effective search space: 2431634823
effective search space used: 2431634823
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)